ClCG08G004840.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG08G004840.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr08: 15188545 .. 15189449 (+)
Sequence length495
RNA-Seq ExpressionClCG08G004840.1
SyntenyClCG08G004840.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAAGTGAGATTTAATTTCAAATTTTAAATTGCTTCACATTCCTTGGCAGTTATTGTGTGACAGGTTTGCTAGGAACATCGTGACTCCAAATTTTTCTACACTCGATCTGTCCACTTTCTTCCTCACAAAACCTAATTTGTTTCTCTATTTCATTCAAATGGTTAATACTCACCAGGGAACTCACACACACTTCTGAACCTAAAATGGTGCGATACCAAAAAAAAAAATACTCACCAGGGAACTCACACACACCTCTGAGTCTACTCACATATTTATTGTTCTTAGTCGTGATTCAAAATGTTGATTTGCATAATGATGCTGATGCCTCTACTACTGCGCATGAAGAGGCTAGGGTTTCTGAAAATATTTCTCTTGATGAGTCTATGAATGTTGCATGTGGTAATGTTACTCTTCAACATCGTTGTTTGGTTGATTCTAGTAAAAATAATTATGTGTTTGGAGATGTCTTTGAAACTGTTGTTGCTTCTGTTATTTTGTTTGTCGGTCTTGATATTGCTTAAAGCCTTGTTGGGTTCGAGTCAGATTCAAAAAAATACTGTTGAGGATGAACCAATTGATGGTCAAATTAATGTGTCTGCTATGGATGTTGAGGATCCTATTGTTGGGATTGTCTCTCCCAAGATTAATATCGAGTCCAATGCTCCTGTTGTTTTTGATATTTTGGGTTTTGACAAGTCCAATGCCAATGCTAAGAATGTTCCTCAAGCTTTTGACCACATGTTGGAAGACATTCAAAGCAATAAGGCTGATAGTAATAAGAGCTCCGAGAAGAAGAGCTCTGATGATGAGGTGCTTCTGAGGGTGTTAGGTGAAAGAAAAAAGAAGAAGATTGAGGACATTGTTGCCTCTAGTTCCGAGGATATTAATGCCTATTTCTGA

mRNA sequence

ATGATCGTGATTCAAAATGTTGATTTGCATAATGATGCTGATGCCTCTACTACTGCGCATGAAGAGGCTAGGGTTTCTGAAAATATTTCTCTTGATGAGTCTATGAATGTTGCATGTGCCTTGTTGGGTTCGAGTCAGATTCAAAAAAATACTGTTGAGGATGAACCAATTGATGGTCAAATTAATGTGTCTGCTATGGATGTTGAGGATCCTATTGTTGGGATTGTCTCTCCCAAGATTAATATCGAGTCCAATGCTCCTGTTGTTTTTGATATTTTGGGTTTTGACAAGTCCAATGCCAATGCTAAGAATGTTCCTCAAGCTTTTGACCACATGTTGGAAGACATTCAAAGCAATAAGGCTGATAGTAATAAGAGCTCCGAGAAGAAGAGCTCTGATGATGAGGTGCTTCTGAGGGTGTTAGGTGAAAGAAAAAAGAAGAAGATTGAGGACATTGTTGCCTCTAGTTCCGAGGATATTAATGCCTATTTCTGA

Coding sequence (CDS)

ATGATCGTGATTCAAAATGTTGATTTGCATAATGATGCTGATGCCTCTACTACTGCGCATGAAGAGGCTAGGGTTTCTGAAAATATTTCTCTTGATGAGTCTATGAATGTTGCATGTGCCTTGTTGGGTTCGAGTCAGATTCAAAAAAATACTGTTGAGGATGAACCAATTGATGGTCAAATTAATGTGTCTGCTATGGATGTTGAGGATCCTATTGTTGGGATTGTCTCTCCCAAGATTAATATCGAGTCCAATGCTCCTGTTGTTTTTGATATTTTGGGTTTTGACAAGTCCAATGCCAATGCTAAGAATGTTCCTCAAGCTTTTGACCACATGTTGGAAGACATTCAAAGCAATAAGGCTGATAGTAATAAGAGCTCCGAGAAGAAGAGCTCTGATGATGAGGTGCTTCTGAGGGTGTTAGGTGAAAGAAAAAAGAAGAAGATTGAGGACATTGTTGCCTCTAGTTCCGAGGATATTAATGCCTATTTCTGA

Protein sequence

MIVIQNVDLHNDADASTTAHEEARVSENISLDESMNVACALLGSSQIQKNTVEDEPIDGQINVSAMDVEDPIVGIVSPKINIESNAPVVFDILGFDKSNANAKNVPQAFDHMLEDIQSNKADSNKSSEKKSSDDEVLLRVLGERKKKKIEDIVASSSEDINAYF
Homology
The following BLAST results are available for this feature:
BLAST of ClCG08G004840.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG08G004840.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG08G004840.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG08G004840.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG08G004840ClCG08G004840gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG08G004840.1-exonClCG08G004840.1-exon-CG_Chr08:15188545..15188548exon
ClCG08G004840.1-exonClCG08G004840.1-exon-CG_Chr08:15188835..15188948exon
ClCG08G004840.1-exonClCG08G004840.1-exon-CG_Chr08:15189073..15189449exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG08G004840.1-cdsClCG08G004840.1-cds-CG_Chr08:15188545..15188548CDS
ClCG08G004840.1-cdsClCG08G004840.1-cds-CG_Chr08:15188835..15188948CDS
ClCG08G004840.1-cdsClCG08G004840.1-cds-CG_Chr08:15189073..15189449CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG08G004840.1ClCG08G004840.1-proteinpolypeptide