ClCG07G003380.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG07G003380.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr07: 3514604 .. 3516442 (-)
Sequence length528
RNA-Seq ExpressionClCG07G003380.1
SyntenyClCG07G003380.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGTAAAGCAGCAATAGCACAGGAAATGCAGAACATGTATGCTCAAAGAAAAAGCTGGAGACAAGAAAAATTGACACAGTTGTGCATGCATAATAAAAGTAACTTTTTCCATCTAGAAATTACTGGCAGGTAACCAAGCACATAGGATAATGATCAATGGATTGGTGAATGATCAAAGAGAACTTCCAAACCCAAATGCTTTTCAGGTCATGGTTCAATCCTTATAGAAACCTACAATGCATGTTATATCTCACGAGTTTTTGATGTCAGGGGTTATAGGGTCATATAACTGTTCGATGAGACTAGTCAAATGAGCTTCAGTTACAAAGATTTTTCTATAATTATTTGATAGGAATTATTGTACAGGACGAGGGGGCCTTTTTGAAGAAGCGCTCCTCTTTTGTGGGCTGGTGTTTTTTGGTGACCCATGTATGCTTTCATTTTATTCTCAATGAAAGGTTGTTTTTATCAAAAAGAGACTAGTCAAATGGGCAATGTGTGTTAGCTAGCATTTAACACCTATGATTATTCAAAATAAGTATATAGGAAACTGATATAGTGCCTTCTCAGAATGCAAGCATAAATCAGACAAAATTTTAGTTCTCTAATTTCCAAATATTTAATTGCTCTTGTTGTTATCTAACCATGGCAATGAAGTATCAAGCAAGCAACAATAATAGCAGAATACAAATACTTTTTAATTGCTCTTGTTATCTAGCCATGCCAATGAAGTATCTGGGTAAGTGATAATAATAGCAGAATACAAATGATTTTCCCTCTAGCGAATGCGGTTAAACTAAATGAATTTCTTAAGATCGTGCTATCATGATGAATATCAAGAGAGAATTTTATTTAAATCAATTAAACTTGCCAACAAAGAAAGACAATCTCTCTATTTATAGAGAATTGGAAAGCAAACTAATCCTAATCCTAATAAATCTAAGAAACTAATCATAATCCTAATAAATCAAATAAACCAATCCTAATCCTAATCCTAATTAATCAACGAAACTAATCCTAATCCTAATTCATTAACGAAACTAATCCTAATCCTAATAAATCAAAGAAACTAATCCTGATCCTAATAAATTAAAGATTTGCTCATAATACCCTAATCCTACTACATCATTTCTATCCTTCCCAAAAAACCTCGTTCTCGAGTTTTAAAACAAAAATGAAGGTAAAAGTAAAAAAATAATCCAAGCGACAAAGTGAAAATTCTCGCCCTCGAGTTTGAGGTGATAACATGAAGCTTCCTTCTCTCAGCTCTTTGAGTGTGGTAGACACCAACTGAAAAATCTCAGCAAAAAATTTCCCATATCCAAATTGGAAATGAAATAATGCTCCATAAGAGTCTCTCCCAATTCGGTTGAATATGGACCTTTGACTATTGTCTAGTGATACTTCTGATTTGAGACCATGAAGCCCAAAATTGAAAAGAGGCCCATTGGAGAGTCTAAGGTTGGAGTCAACAAATTGTCAATTAGGGTTTTTGTGAGAATTACCAAAATTGCCCTTGCTTCTAATTTATTTTCTTCTTCATCGTGAACATGGATAGTTGCCACCAATGTTTTCTTCTTCCATCTTCCCCAGCGAGTCCTCCTTCGACAAGTTGATGGCGACAGCGTTCACACCACTTTTCGGTGAGCTCACGGTGGTCGGCAAGAGGTCCTCTAACGAAGTGACGGCAGCAAGCAAACTATCCTCCGGCGAAGCTGTAAGGTTTGGCCTCTCGTGTCCTTGTCCGGTGGCTTCTTCCGACCCTTCATCCTCCTTTAACGAAGTTACCGTGGAAAGATTTGGCCTAGTCGACAACAACCTACGCTTCAATTAA

mRNA sequence

ATGAGTTGTAAAGCAGCAATAGCACAGGAAATGCAGAACATGTATGCTCAAAGAAAAAGCTGGAGACAAGAAAAATTGACACAGTTGTGCATGCATAATAAAAGTAACCAAGCACATAGGATAATGATCAATGGATTGGTGAATGATCAAAGAGAACTTCCAAACCCAAATGCTTTTCAGACCATGAAGCCCAAAATTGAAAAGAGGCCCATTGGAGAGTCTAAGGTTGGAGTCAACAAATTGTCAATTAGGTTGCCACCAATGTTTTCTTCTTCCATCTTCCCCAGCGAGTCCTCCTTCGACAAGTTGATGGCGACAGCGTTCACACCACTTTTCGGTGAGCTCACGGTGGTCGGCAAGAGGTCCTCTAACGAAGTGACGGCAGCAAGCAAACTATCCTCCGGCGAAGCTGTAAGGTTTGGCCTCTCGTGTCCTTGTCCGGTGGCTTCTTCCGACCCTTCATCCTCCTTTAACGAAGTTACCGTGGAAAGATTTGGCCTAGTCGACAACAACCTACGCTTCAATTAA

Coding sequence (CDS)

ATGAGTTGTAAAGCAGCAATAGCACAGGAAATGCAGAACATGTATGCTCAAAGAAAAAGCTGGAGACAAGAAAAATTGACACAGTTGTGCATGCATAATAAAAGTAACCAAGCACATAGGATAATGATCAATGGATTGGTGAATGATCAAAGAGAACTTCCAAACCCAAATGCTTTTCAGACCATGAAGCCCAAAATTGAAAAGAGGCCCATTGGAGAGTCTAAGGTTGGAGTCAACAAATTGTCAATTAGGTTGCCACCAATGTTTTCTTCTTCCATCTTCCCCAGCGAGTCCTCCTTCGACAAGTTGATGGCGACAGCGTTCACACCACTTTTCGGTGAGCTCACGGTGGTCGGCAAGAGGTCCTCTAACGAAGTGACGGCAGCAAGCAAACTATCCTCCGGCGAAGCTGTAAGGTTTGGCCTCTCGTGTCCTTGTCCGGTGGCTTCTTCCGACCCTTCATCCTCCTTTAACGAAGTTACCGTGGAAAGATTTGGCCTAGTCGACAACAACCTACGCTTCAATTAA

Protein sequence

MSCKAAIAQEMQNMYAQRKSWRQEKLTQLCMHNKSNQAHRIMINGLVNDQRELPNPNAFQTMKPKIEKRPIGESKVGVNKLSIRLPPMFSSSIFPSESSFDKLMATAFTPLFGELTVVGKRSSNEVTAASKLSSGEAVRFGLSCPCPVASSDPSSSFNEVTVERFGLVDNNLRFN
Homology
The following BLAST results are available for this feature:
BLAST of ClCG07G003380.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG07G003380.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG07G003380.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG07G003380.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG07G003380ClCG07G003380gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG07G003380.1-exonClCG07G003380.1-exon-CG_Chr07:3514604..3514879exon
ClCG07G003380.1-exonClCG07G003380.1-exon-CG_Chr07:3514950..3515021exon
ClCG07G003380.1-exonClCG07G003380.1-exon-CG_Chr07:3516232..3516308exon
ClCG07G003380.1-exonClCG07G003380.1-exon-CG_Chr07:3516340..3516442exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG07G003380.1-cdsClCG07G003380.1-cds-CG_Chr07:3514604..3514879CDS
ClCG07G003380.1-cdsClCG07G003380.1-cds-CG_Chr07:3514950..3515021CDS
ClCG07G003380.1-cdsClCG07G003380.1-cds-CG_Chr07:3516232..3516308CDS
ClCG07G003380.1-cdsClCG07G003380.1-cds-CG_Chr07:3516340..3516442CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG07G003380.1ClCG07G003380.1-proteinpolypeptide