ClCG06G008570.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G008570.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Maturase
Location	CG_Chr06: 12685081 .. 12695473 (-)
Sequence length	1083
RNA-Seq Expression	ClCG06G008570.1
Synteny	ClCG06G008570.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAATTGCTTCAAACAGAACACCAAGGTTCTCAACTTACTGCTCAATAGTTTTGCCAAATATATCACCGTTTCAACAAAAAGATTATCTAACACTAAAATATTGTCAACTATAGGTATTTGTGGACGAACTTTTAGAAAAGTATCATGTAAATAAGTACTATTGTTACAAACTACAAATAAGACGTTCTACAAAGTCCATACTTCTGCTTTCTGGAAGATTATTACAACAATATGATGTAGACATGTACATAAAGCTTGAAACAACAAGAATTGATTTTCATCGAACACAACAATCTCAAATTAGAGCTAAATTATATCAAGGTATAGTTGATAGTGTGAATGTGGGAGAATTAAGACGCAATAAAATTGGCAAGAGAATTGTACTACCAGCTTCTTTCATTGGAGGCCCAAGAGATCTGCGATGTCGTTATTTAGATGCTATGGCATTAGTGCAAGGGTTTGGAAAGTCAAGTTTATTCATAACCATGACATGCAACTCTAAGTGGAAAGAGATAAAGGATGAATTAAATCATGGCCAACGTCTTCAAGGATAGACCAAATTTGACTTCAAGAATTTTTCGCAACAAACTGGAAGATCTTAAAGACCAAATATTTAAAAAGCAAATATTTGGTAAGGTTGCAGCTTATGTATATGTGATTAAGTTTAAAAAAAGAGGGCTGCCACATGTGCATATATTTATTTGTTTTAAGATAAGGATATAAGATAACAAATGCAGATGACTATGACAAATATGTAAATGTTGAATTACCGAATAAAGAAACTTATCCAACATTATATGAGGTTGTCGTGAAGCATATGTTCCATGGACCTTGTGGACAAACAAACAAGACAAATAGTTGTATGTGAAAAACATTCAAAAAGTGTTTTTTTTATCATCTTAAATTAGGGATGTTTTTATGAGATTTCACGTGTTTGCTAGTAGTTTTTTAGGTGATTATGGTAAAAACTAATTGTCAAATGTTAAAAAGACCAAATCGAGCGAAAAACGGAAGAAAATGCAGGAAAACCCTAAAAACAGGGCAACGCAGCCAAGAGCGTCGTTGCGCTCTAAACTCGAGAGCATAAAAAATCAGTAGTTGAGGGAGCGGATCGTCGCTGGGAATGAGCGCCGCTACGTTGTGCGAAGAGCATCGCAGTGCTGTGGCACTACGCTTGAAACTTGCATCCATGATGATAGCGTCCCAACGCTGCCCGAGAGCGTCACTATGCTCCACTTTTATGACAGACAATGGAGAGCGCAACGATACCAGATTTCCTAAATTGAAAAATCTTTATTTTTAGAAAGAATTTTAGGCAGTTTGTCAATAATTTGAGGGGTTTCCAGTAACCCCAATAACACAATACAGAGTCTCAAAGAGTGAGTTAGCTACAAGGAAGAGAGAAAAAGTTTGAGAGAGAGTTTGGTGTCGTTTGAGTTCCCAACGTGAAGATCAAGGAAGTCTTAGTGGTTCCTCCTCAATCAAGGGCTTCTTTACAGTAGACTTTTTCTTTCTTTACACTTCTTCTATGCTGAAAACTATCTTGAACATGTTGCCTAAAGTTATGAGTGGCTAGACTCTTTAGTTTTAAGGTATTGATGAATTGGTTATGAAGTTATGCTAATGTTGTAGACTTTTCATGGATTGTTGTAATGAGTATGCTTTTCATTGTTATTGTGCCTTATTCTTCTTGATTGGTCATCCATATTTGCTAGATTAGATGTATGATTTGAGGAATTGTATATCCAATTGGAACTACAATAATGAATCGTTATTAATTTTTCATGGAAATAGTTAGGTTAATAATGAAAGTTGCTAAAGACTAATCTTAATGCCATGTGATCTAACTCGATTTCAAGATGTTAGTAATCAATTAGGTTGCATGAGAAAAAGGTTGTTTTTTTTTTATAGAAAATAACCCGAATTTATGTTTCTAGACTTAAGCATATGAATTACGATTAATTCCATGAACTCTAGAATATTGCATAATGGACTAAACAAGGATTCAATACCCTAGAACTCTCTTTGACTCTTGTATTTCAACTTTACTTGCTTTCTTTATTTGCTTTCTCAATCACTACTTGAAGTTGAATCCTCAAATAAAATTGACTCAACTCTAGAATAGCTAAGTGATTTAAACTTTCACAATTGGATCCTCAGTGGAACGATATTCAAACTTTAACTGTCTTATATTATAACTTGACCCGTGCACTTATAGCTTGCATCAAATTTTTGGCGTCATTGTCGGGGATCCAAAGAATGGTGTTTATTACTTAATATTCATAAGAGTTGATAGATCTTACTTTAAGGTTTATATTATTTTTGTTGCTAATTTTTCCGGTTTATGCCTCGTGACAATACTAATCTTCTTTCTCTTTATCCCGAGATTGATAAGATATTTAGAAAAGATCTAAGGGTTCAACACAATCCCACCGGAGAGGTGGTGGAGGAGATAGCCAAGGCAATTAGAGACTACTTTCAACCGACACTGCCGACAAATAAACCCGACATTGTGAACATGTCTATTAGTGTCAACAAATTTGAGCTAAAACTGGGGTTGATTGAAATGGCTGAAGAGCTTGCTTTTAGAGAAAGAACAAATGAAGATCCTCACAAGCACCTTCGGTCTTTTCAAGAGATATGAGGGATGGTAAAGATGAATGGAGTTTCTAATGATACTATCAAACTAAGACTCTTCCCTTTTTCTTTACAGGACTGAGCAAAGGATTGGTTGGAAACCATACCACCAAATATTTTCCATCGGCTAAGTCCCAAAGGTTGAGAATGGAGATTGGTACATTCCGTCAACAAGAGGATGAGCAATTGTATGAGGCTTGGGAGAGGTACAAGGATCTCTTGAGACGGTGCCCTCAACATGGTTATTCGGATTGGTTGTAAATTCAACTATTCTACAATGGATTGTCAAGTTCAACAAAATTCATCCTAGATGTCACCGTCAAAGGTTCTGTCTTTTCTAAAACCGCTCAAGAAGCCTATACCATACTTGAAGACTTGGCCACTTCATCTTACAATTGTTCATGTGAAAGGTCTTCCACAACTATCCCAAAGGCCGCCAGATTATATGAGGTGGATGAGGTAAATTCTCTAAAGCTCAAATGGCTTTGCTTACTAATGCTCTTTCTAAATTGATTGCAGGGGGTCAAGCTCAAGTGAGTCCACCATCTATAGCATCTCTTGTCGCCATGGCTTTAGAGATGGCTACTCAAAAGGAGTTGGAACAAGGAGATAATGAGATGGCCAACTATGTTGATAGAGGACATTATAGATGCCACCACCAACAACTTCCAACGCATTACCATCCAAGCTTGAGGAACTGTAAAAACTTTTCTTATGCTAACAATAGGAATGTTTTGCAGGATCTTGATTTTCTAATGTAGGTCCATTTCACTCTAAGAAGAAGTCCAATATAGAAGACTTGATGATAGAGTTCATCAAAGAATCTAGAGGAAGGACCACCACATTAGAGAACATGGTGCAAAGTCATGGCAAGGTTGTTCACAACATTGAGGTGCAAATTAGTCAAATAGCCACTTCTCTTCAAACAATGCAAAAGGGTAACTTTCCTAGTTGCCCCGAAAAGAATCCAAAGAGCAGTGCAAGCCCTTGACTTTGAGGAGTGGAAAAAAGTTGTCCACTCCTTTGATTGCTGATGAGAATGAGGAGCAAGAGGTAAATGAGCATCCAAGAGCCTATCTTAGAAGATGAATCCAAGAAGGTCATAGAAAAGGAGGAAATGGTAAATGAATCAACATATTCAAGTAAGTCATCTAATATTCTACCTTTTGTACCTAACACTTTGCCCTATCCTCAACGTTTTCGAAAGTAAGAAATAGACTCTCAATTTGCTAAATTTTTAGAATTATTCAAAAAGCTTCACATTAATATCCCATTTGCTGAGGCTTTAGAACAAATGCGCAACTATGCTAAATTCATGAAAGACGTCTTGTTTAAGAAGAAAAAATTTGGGCAATATGAGATGATTAGCATAATAGAGAGTGCTGATAACTTGTAGAAATACAAGTAATTATAGCTTTTTCTTAGAATAATGGAGAAGATTTAGAGGATAATGCGGTAGTCTTAAGTTAAAATCATTGATAAAAACTCTCATTGCGTTTTACTCTTGGTTTGATGAAGATAAATGTTCTAAAGTAAACTATCTCTAAAACGCATTGTTTAGTGCAGGAACGCATGACTCAACATAGAAATATTTCAAGTGATAGACGTAGAGCCGTAACTCATCAGACGCAAGTTTTGAGATCTTCAACAGTTGAAGATTAATCTGCTTGATCTGCAGCACGACGAGCGGTTATCAATTAGTCAAGAATCACGCAATAATGCGAGAATGACGGAAGGCAACAAATCAGCCGATAATGATGAAAATTTGTCAACGTTACAATGCAGCCTCTATAAAAGGGCAGATTCGTAGGCTGAAAAGGTTGTTGAATTTCCTAGGAATTCCTTTGTTTTTGTAGCAAAGCTCTTCCAAGAAGGAAATCTGAGACAGAATGCTTAAGAAAGTAGTCTTCTTTTGTTGTGTAAATTACTAACAATAGACAGATCACAAGTCCCCGGCAACGGCGCCAAAAACTTGTTGTGTAATTATGTGTGGAAATGGAAATTTACAAACGCAAGGTGTGATTAAGATATGATGATGCGTTTCACATATCATGAGTTGAACATGCTATGCGTCTTACTACGATGCGTTGGTGATCTTGTCAAGTTTTCCTATCCTTTACCCAAGTATAAGCAAAGGAGTAGGTTTTCTCGGTGAGTCCGAGGTCGAACACAGGGATTATGTTGATTCAATATTTAGATGGATTTCATGCATTGCAGCGGTAACCAAGAAATAGTTGAGAGAGTAGTTTTGTTTCTACTCTAAGGAAAGCGATAGTATGTACACTATACTAAAATGTGGAAGATGGAAAGGCATGCGACACAGCAAATTCATCTAATGATGTGAATGAATGGATAAAGAAAGGGTTCAGGTTGGTTAACATCTAACATCGGAAACGCATGGTAGTATTCTATTAATACTTGCGACTCTTCTCTTGGTTGTCAGCCGCTATGCGTTATATGTCTATAACGCATAGGAGAGTGTTAAGAACCAAGGTTATCCCCATAGACAGGTAACACTTCTTGGCCCTTGTCAATTGAGTTTCACAATCACTTACCCTCTCGAGCAGTTTGATTATTACTACTTATATCGATTTGTCAGATGAACATAAGCATCGGATTAAGATCGCAATTGACAAGATGAAATAGTTACACTATGGTTCTTAGTTAGATGCTAACGCAACCCTAGACCCTTGAGTGATTAGTTACTCATGGTTTGAAAGTAAAAAGCGGAAAGTATAGAGAAATGAGTAGACATGGAAGATATATATATTGGTGAAACGGAATACAACTTTAGATAAGCTCAATGTCTTGACATAAATCTAAAATCAAGATAGAAAAACTAAGAAGGAAAGCAGGAAAGGCGTCAATGTCTTGAGTCACCCGGATAGAAGCGTGAGGTTCTACTGTGAAGTGGTCCGGCGGAAGGAAGACTCTTCTCTCTCGAGCTATTCGTCTCCGGTTGAAGTCTGAGAGAACTCTGCTGGCACTTATGGAGTTCTTCCGAGAATCAACAACACTTTCTCATCTCGCAGAGCTGCCCTTTTATAGATGATGCGTTCGCAATTAATGGTAAATCTGCTTGATTGGCGGCGAGATTGATACCATGCGTCCATCTCGCCTGATTGCTTGATTCTTGGGTCAATTAAGATCCACCACTTTAGCCACAAATCATGTTCGTCAATCATCCGACAATCTCTCAAGATTCTGATTTGATGCTCGGCGCCTTGCATTGATGGTCGTCTATGCGTCCATGGATAGTTTGGCCGATGTCAACGCGTCGTAGGTTGCTAACGCATAGTCATGCGTTGAATAGTTGTTAACGCATCGTCAGGTTGTTTGCGTTCCGTTCAGATCATGCGTCCACGAAGAACAGATTGCTAACGCGTCGTCCTGTGTTAAGAAGTCATCAACGCATCGTTTTGCATTCCTGCGTCAAAACATGCGTTTTAGGCTCAAAAAGTGGTAAAATCATTATTTTCCTAAAAATAGAAGAGTATAACACAAAGGAAGATTTCTTAATAAAAATTAACATAACTTGCCGCATGCTTCTCTATTTAATCTCTATTTATCTAAGAAAAAGGCTATCATAACTTGTATTTCTACAAGTTATCATCTTTCCGATCAACCACAACATCACAGTGGCCATCACGTAACCACCGTTAGCGGAGTTAAAAGATTGATCAGCCACCAACTATTTCCCTGCTTCCTATCTCTATCTTTACCTTCTTGTTGTTTACATCTTGTATCAAGAGATTATACTTGTTGTAACCCTTGAATCCATTTCAGTAATCTACTCATCGTTCATGACTACCATTTTTGCATCTGTTTTCGCTTTCTTGTTAAAAAGCATGAGTAACTAAATCTCTTAAGGGTTAGGGCAATGCTATTGTCTGTTTAAGAAACAAAGTAGTGATTATTTCATTTTTATAATGTATGAGAATCTATTGCTTGTTTCCATTTAGTAAATCGGGATAAATAGAAATAATCAACTGCTTGAGAAAGTAAGTGATTGTGGAACTCATTAAGCAAACTAAGTAGTATTTCTAGACATAGAAACAACCTTAAGGTTCAATAATACTTCACTTGTGCGTCATAGACATATGAGCATGCAATCTGTCAGCCGAGAGGTGCAAATTATAAGTTGAGAACGTGAAATAATCTACACTGCGTTTTTTAAGATAGATAATAACGATCTTCTAACCTTGTTTTTCTCATTCCTATCAACTTTTGCTGATTGCCTGCTATAATGCATCCTTCACCAACTTCATCCCTTGTTAGTTTAGAATTTTATTGCTTTAATACTTAAATGCAATACCATTCCAAATTTATATGTTTAAACATAGCCGATATGCTTAGAGAGTTTAAAATCTACATAAGTCCCTGCGTTCGACCTCAAACTCACTGAGAAACCTAATTTCTGCTTATACTTGGGTTCAATTGGGAAAACTTGATTGAAATGTTAACGCATGCCTAGCAACTCTAGACACGCAACAAATTTTGGTGTCGTTTCTAGGGACTTAAGCATTGATTTAACTATGTTATTATATTTGGCTGTAGGAAACACCTCAATTAACGGAGTATTAAGTTTTCACTTCGTCGGGGAACTCCAAACAGTATATGAGAACCAGTCCAGAGTTCAATATTGACCCTAAAATTGAGAGGATCTTCAGAAGAAGGACCAGACAAAATCGGCGTAGAAGGACCAACCGACAATCAGACGATAATATGGTCAACCCATGCAACCCTGCTTAAGGAAACAATCTAAATAACATGAATTCAGACCTTTAGACGAATCCAATTTTGTTGGCGCATGATAGAAATAGACCAATGCGAGAGTATACGTCGCCGAATTTATATGATTTCTCACCTGGGATTAGATGCCCCACCTTCTAGGGAAACGGTAGGTTTAAAATGAAACTTGTCATGCTGTAGATGCTACAACCTGCAAGACAATGTGGCAGTGCTTTGGGAGAAGACCTACATGTACATCTGAAGAGCTTCCTAGAGATATGCAACACGTTCTCCATATTAGAAGTAACGCAGGATGGTATCCGACTTTCTCTCTTCCTATTCTCCCTTAGAGATGAGGCGAGATAGTGAGCTTATTCATTTGAGCCTTGTGAAAGCATAACTTGGGAACACATGGTGAAGAAATTCATGCAAAAGTATTTCCCTCTGACTATTAATGCAAGAAGGAGACATAATATCGTAACCTTCAAGCAGAAAGATTCGGAGACGTTGAATGATGCTTGGACCCGATTCAAGAGGCTTCTAAGGAACTGTCCACACAACGGAATCTTTGCTTTCGTTCAGATGTAAATTTTCTATGGAGGACTTAATCGACCTTCGCAATCAGTCGTTGATGCCTCCCCTGCGGGAGGATTAATGGACAAGACATATGTGTAAGCCAAGGTGATAAGCACTTGAAAAGTGCTTTCTATCTTCTCAAATTAAGGGAGTCTATATTAGATTTCACTTGTTTGCTAGTGGTTTTCAGGTTAAAATGAGTAAATTAGAAGAAAAGACCAAAAGATTAAAACCGAGCAAGAATACGGCGAAAAAGAGAAAAAAAACTAAATATGACAAAAATTGGGGCAGCGCCACGGCGCCTGGACGATGCTGCTGCGGTGCTAAAACCCGAGAACAAAGAATTTTGCTCGCAACCCTACCGTCATGGCGCCGTTTCAAAATTCTCAATAGCGTCGCAACGCCAGTTTTCCATAAATGAAAAAGTGATATTTTTGGTAAGTTTTTGGGCAGCCAACTCTATAAATTTGGGGGTTTCAGCAACCCTAAGAATGAATCTACCATCAATCTAAAAACCAAAAGAGGCACAAGAAGGAGAGAATTGAGTGAGAGTTCATAAAAGAGTTCAAAGAGTGAGTTAGTTGCAAGGAAGAGGAAAAGAGTTTGAGATAGTCGTGGTGCCCTTCAAATTCCGACGTGAGAGCCAAGGAGATCGTGACGGTGCTACCTCAATCAAGAGTCTCTTTTCAGTAGAGTTTCCCTTTCTTTACACTCTTTCTTTGTTTATTTTGCTTAAACATTTTGCTTCAAGCTATGAGTGGCTAAACTCTTTAGTTGTAGGGTTTTGATGATTTGTTTATGAATTCATGTTGATCTTGTAGACTTTCATGGTTTTGTTGGAATGATTATGTTTTTCATTGTTATTGTGTTTAATTCTTGTAGATTGGCCATCTTCACATGTTAGGTTAGATGTATGATTGAGAGATTGTATGTCTAACTTGATCTATAACAATGAATTGTTGTTAATCTATCACGAGAGTAGTTAGGTTGACAATAAAAGTTGTTAAAGACTATTCTTAATGCCATGTAATTTGTATTGGTTTCAAGAGATTAGTAATCAATCGAGTTGCATGAGAAACACCGAAAGTCTTTAAAGAAGAGATCGAAGATCCCAAGTTCTTTTACTCCATTTAGAAAGTCTTTTCCCTTGGATGACTCGTAGGAGGTGAGAAGGGCCTTTACTACTCCATCCCACACAGTGTACTACTATCGGCCCTACCAGGCAACATCTACCTACACAAGCTCGATCAGGAGATAGGGAGGATCCGATAGAAGTACGAAATTAAGATTGTTCAGAGAATCAGATCGGTTCTATTAAGGATAGGTCGTATTGATGACCAATAAAACTCTGGAGAAGAAGCAAGCTTCAACGCTCCCCAAGATTACAGAGCCCTCATTATAGGGAGGGTAAAGAGCTTCCAACGCAAAGTGGCCTTTCATTCCTTTGTTTCGTCGTGGCACACCCCCCACACAAGCACCACCCAGCTCAGGGGGGACCAAAAAACGCCTTTCGTTTTCCCCCCTTCGTCGGCCCTTGTTGCCTTCCTTAACAAGCCCTCGAGCCTCCTTTGCGCCGCCTTCCTCATAGAAGCCATGAGAGACCTTTTTAAGTATTGCAAAAGAAAAGGCCTGCTGATAGATCTGGGCGGGGAGGCGATACTAGTTATCAGGTCAGAGAGACGCCTGGCCCGTAAGCAGGCCCCCTTAAAAACCCATTACTTAATAAGGATTTGTTACGCGCGATATGCCGACGACTTACTACTGGGAATCGTGGGTGCCATAGAGCTCTTCATAGAAATACAAAAACATATCGCCCACTTCCTACATATCGCCCACTCCCATAAAATTCTTGCGAGAGCTGGAGAAGCGTCTACGGGTAAAGCACAGTATCCATATAACAGCTTGTCACCTACGCTCCGCCATCCATTCAAACATTAGGAACCTAGGTAATAGTATCCCGATCAAAGAGCTGACGAAGGGGATGAGTCAAACAGGGAGTCTACTGGACGGGGTTCAACTAGCGGAGACTCTTGGAACTGTTGGAGTAAGAAGTCCCCAAGTGAGCGTATTATGGGGGACTGTCGAGCACATCCGGCAAGGATCAAGGGGGATCTCGTTGTTGCATAGCTTAGGTCGTAGCAACGCACCATCGGACGTTCAACAGGCAGTTTCACGATCGGGCATGAGTGCTTGGAAGTTGTCATTGTATACTCCCGCGGGTCGGAAGGCGGCGGGGGAAGGAGGAGGACACTGGGTGGATCTATCAGCAGAGCTCTTGTTGGTAAAGTAGATCGAGAGAGAGAATTGGCTTCTCAATAATCTGCTGGAGTCAGACTATCTCTTAAAGGGGGGAGTTCACAATGGGACTTTCTTGCACTATGTGGAACGGTTTCTTATCGGATTGGACATGCCTATAGCTAAAGGAACGTACAGCGAGCCGTAG

mRNA sequence

ATGGAAGAATTGCTTCAAACAGAACACCAAGAAGCAAGCTTCAACGCTCCCCAAGATTACAGAGCCCTCATTATAGGGAGGGTAAAGAGCTTCCAACGCAAAGTGGCCTTTCATTCCTTTGTTTCGTCGTGGCACACCCCCCACACAAGCACCACCCAGCTCAGGGGGGACCAAAAAACGCCTTTCGTTTTCCCCCCTTCGTCGGCCCTTGTTGCCTTCCTTAACAAGCCCTCGAGCCTCCTTTGCGCCGCCTTCCTCATAGAAGCCATGAGAGACCTTTTTAAGTATTGCAAAAGAAAAGGCCTGCTGATAGATCTGGGCGGGGAGGCGATACTAGTTATCAGGTCAGAGAGACGCCTGGCCCGTAAGCAGGCCCCCTTAAAAACCCATTACTTAATAAGGATTTGTTACGCGCGATATGCCGACGACTTACTACTGGGAATCGTGGGTGCCATAGAGCTCTTCATAGAAATACAAAAACATATCGCCCACTTCCTACATATCGCCCACTCCCATAAAATTCTTGCGAGAGCTGGAGAAGCGTCTACGGCTTGTCACCTACGCTCCGCCATCCATTCAAACATTAGGAACCTAGGTAATAGTATCCCGATCAAAGAGCTGACGAAGGGGATGAGTCAAACAGGGAGTCTACTGGACGGGGTTCAACTAGCGGAGACTCTTGGAACTGTTGGAGTAAGAAGTCCCCAAGTGAGCGTATTATGGGGGACTGTCGAGCACATCCGGCAAGGATCAAGGGGGATCTCGTTGTTGCATAGCTTAGGTCGTAGCAACGCACCATCGGACGTTCAACAGGCAGTTTCACGATCGGGCATGAGTGCTTGGAAGTTGTCATTGTATACTCCCGCGGGTCGGAAGGCGGCGGGGGAAGGAGGAGGACACTGGGTGGATCTATCAGCAGAGCTCTTGTTGATCGAGAGAGAGAATTGGCTTCTCAATAATCTGCTGGAGTCAGACTATCTCTTAAAGGGGGGAGTTCACAATGGGACTTTCTTGCACTATGTGGAACGGTTTCTTATCGGATTGGACATGCCTATAGCTAAAGGAACGTACAGCGAGCCGTAG

Coding sequence (CDS)

ATGGAAGAATTGCTTCAAACAGAACACCAAGAAGCAAGCTTCAACGCTCCCCAAGATTACAGAGCCCTCATTATAGGGAGGGTAAAGAGCTTCCAACGCAAAGTGGCCTTTCATTCCTTTGTTTCGTCGTGGCACACCCCCCACACAAGCACCACCCAGCTCAGGGGGGACCAAAAAACGCCTTTCGTTTTCCCCCCTTCGTCGGCCCTTGTTGCCTTCCTTAACAAGCCCTCGAGCCTCCTTTGCGCCGCCTTCCTCATAGAAGCCATGAGAGACCTTTTTAAGTATTGCAAAAGAAAAGGCCTGCTGATAGATCTGGGCGGGGAGGCGATACTAGTTATCAGGTCAGAGAGACGCCTGGCCCGTAAGCAGGCCCCCTTAAAAACCCATTACTTAATAAGGATTTGTTACGCGCGATATGCCGACGACTTACTACTGGGAATCGTGGGTGCCATAGAGCTCTTCATAGAAATACAAAAACATATCGCCCACTTCCTACATATCGCCCACTCCCATAAAATTCTTGCGAGAGCTGGAGAAGCGTCTACGGCTTGTCACCTACGCTCCGCCATCCATTCAAACATTAGGAACCTAGGTAATAGTATCCCGATCAAAGAGCTGACGAAGGGGATGAGTCAAACAGGGAGTCTACTGGACGGGGTTCAACTAGCGGAGACTCTTGGAACTGTTGGAGTAAGAAGTCCCCAAGTGAGCGTATTATGGGGGACTGTCGAGCACATCCGGCAAGGATCAAGGGGGATCTCGTTGTTGCATAGCTTAGGTCGTAGCAACGCACCATCGGACGTTCAACAGGCAGTTTCACGATCGGGCATGAGTGCTTGGAAGTTGTCATTGTATACTCCCGCGGGTCGGAAGGCGGCGGGGGAAGGAGGAGGACACTGGGTGGATCTATCAGCAGAGCTCTTGTTGATCGAGAGAGAGAATTGGCTTCTCAATAATCTGCTGGAGTCAGACTATCTCTTAAAGGGGGGAGTTCACAATGGGACTTTCTTGCACTATGTGGAACGGTTTCTTATCGGATTGGACATGCCTATAGCTAAAGGAACGTACAGCGAGCCGTAG

Protein sequence

MEELLQTEHQEASFNAPQDYRALIIGRVKSFQRKVAFHSFVSSWHTPHTSTTQLRGDQKTPFVFPPSSALVAFLNKPSSLLCAAFLIEAMRDLFKYCKRKGLLIDLGGEAILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAIELFIEIQKHIAHFLHIAHSHKILARAGEASTACHLRSAIHSNIRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTVGVRSPQVSVLWGTVEHIRQGSRGISLLHSLGRSNAPSDVQQAVSRSGMSAWKLSLYTPAGRKAAGEGGGHWVDLSAELLLIERENWLLNNLLESDYLLKGGVHNGTFLHYVERFLIGLDMPIAKGTYSEP

Homology

[Close]

BLAST of ClCG06G008570.1 vs. NCBI nr
Match: YP_003587246.1 (maturase, partial [Citrullus lanatus] >ACV96636.1 maturase, partial [Citrullus lanatus])

HSP 1 Score: 482.3 bits (1240), Expect = 3.8e-132
Identity = 265/353 (75.07%), Postives = 273/353 (77.34%), Query Frame = 0


Query: 10  QEASFNAPQDYRALIIGRVKSFQRKVAFHSFVSSWHTPHTSTTQLRGDQKTPFVFPPSSA 69
           +EASFNAPQDYRALI+GRVKSFQRK AFHS VSSWHTPHTSTT+LRGDQKTPFVFPPSSA
Sbjct: 175 EEASFNAPQDYRALIMGRVKSFQRKAAFHSLVSSWHTPHTSTTRLRGDQKTPFVFPPSSA 234

Query: 70  LVAFLNKPSSLLCAAFLIE--------------------AMRDLFKYCKRKGLLIDLGGE 129
           L AFLNKPSSLLCAAFLIE                    AMRDLFKYCKRKGLLI+LGGE
Sbjct: 235 LAAFLNKPSSLLCAAFLIEATGLTPQAEFYGRERCNKKLAMRDLFKYCKRKGLLIELGGE 294

Query: 130 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAIELFIEIQKHIAHFLH-- 189
           AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGA+EL IEIQK IAHFL   
Sbjct: 295 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAVELLIEIQKRIAHFLQSG 354

Query: 190 ------IAHSHKILARAGEA---------------------------------STACHLR 249
                  A +  I AR+                                     TACHLR
Sbjct: 355 LNLWVGFAGTTTIAARSTVEFLGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLR 414

Query: 250 SAIHSNIRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTVGVRSPQVSVLWGTVEHIR 302
           SAIHSN RNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGT GVRSPQVSVLWGTV+HIR
Sbjct: 415 SAIHSNFRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIR 474

[Close]

BLAST of ClCG06G008570.1 vs. NCBI nr
Match: YP_009913627.1 (maturase [Luffa acutangula] >QLJ93010.1 maturase [Luffa acutangula])

HSP 1 Score: 480.7 bits (1236), Expect = 1.1e-131
Identity = 264/353 (74.79%), Postives = 272/353 (77.05%), Query Frame = 0


Query: 10  QEASFNAPQDYRALIIGRVKSFQRKVAFHSFVSSWHTPHTSTTQLRGDQKTPFVFPPSSA 69
           +EASFNAPQDYRALI+GRVKSFQRK AFHS VSSWHTPHTSTT+LRGDQKTPFVFPPSSA
Sbjct: 176 EEASFNAPQDYRALIMGRVKSFQRKAAFHSLVSSWHTPHTSTTRLRGDQKTPFVFPPSSA 235

Query: 70  LVAFLNKPSSLLCAAFLIE--------------------AMRDLFKYCKRKGLLIDLGGE 129
           L AFLNKPSSLLCAAFLIE                    AMRDLFKYCKRKGLLI+LGGE
Sbjct: 236 LAAFLNKPSSLLCAAFLIEATGLTPQAEFYGRERCNKKLAMRDLFKYCKRKGLLIELGGE 295

Query: 130 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAIELFIEIQKHIAHFLH-- 189
           AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGA+EL IEIQK IAHFL   
Sbjct: 296 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAVELLIEIQKRIAHFLQSG 355

Query: 190 ------IAHSHKILARAGEA---------------------------------STACHLR 249
                  A +  I AR+                                     TACHLR
Sbjct: 356 LNLWVGFAGTTTIAARSTVEFPGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLR 415

Query: 250 SAIHSNIRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTVGVRSPQVSVLWGTVEHIR 302
           SAIHSN RNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGT GVRSPQVSVLWGTV+HIR
Sbjct: 416 SAIHSNFRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIR 475

[Close]

BLAST of ClCG06G008570.1 vs. NCBI nr
Match: ADK56487.1 (maturase, partial [Momordica parvifolia])

HSP 1 Score: 480.7 bits (1236), Expect = 1.1e-131
Identity = 264/353 (74.79%), Postives = 272/353 (77.05%), Query Frame = 0


Query: 10  QEASFNAPQDYRALIIGRVKSFQRKVAFHSFVSSWHTPHTSTTQLRGDQKTPFVFPPSSA 69
           +EASFNAPQDYRALI+GRVKSFQRK AFHS VSSWHTPHTSTT+LRGDQKTPFVFPPSSA
Sbjct: 101 EEASFNAPQDYRALIMGRVKSFQRKAAFHSLVSSWHTPHTSTTRLRGDQKTPFVFPPSSA 160

Query: 70  LVAFLNKPSSLLCAAFLIE--------------------AMRDLFKYCKRKGLLIDLGGE 129
           L AFLNKPSSLLCAAFLIE                    AMRDLFKYCKRKGLLI+LGGE
Sbjct: 161 LAAFLNKPSSLLCAAFLIEATGLTPQAEFYGRERCNKKLAMRDLFKYCKRKGLLIELGGE 220

Query: 130 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAIELFIEIQKHIAHFLH-- 189
           AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGA+EL IEIQK IAHFL   
Sbjct: 221 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAVELLIEIQKRIAHFLQSG 280

Query: 190 ------IAHSHKILARAGEA---------------------------------STACHLR 249
                  A +  I AR+                                     TACHLR
Sbjct: 281 LNLWVGFAGTTTIAARSTVEFPGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLR 340

Query: 250 SAIHSNIRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTVGVRSPQVSVLWGTVEHIR 302
           SAIHSN RNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGT GVRSPQVSVLWGTV+HIR
Sbjct: 341 SAIHSNFRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIR 400

[Close]

BLAST of ClCG06G008570.1 vs. NCBI nr
Match: AAQ08728.1 (maturase, partial [Luffa aegyptiaca])

HSP 1 Score: 480.7 bits (1236), Expect = 1.1e-131
Identity = 264/353 (74.79%), Postives = 272/353 (77.05%), Query Frame = 0


Query: 10  QEASFNAPQDYRALIIGRVKSFQRKVAFHSFVSSWHTPHTSTTQLRGDQKTPFVFPPSSA 69
           +EASFNAPQDYRALI+GRVKSFQRK AFHS VSSWHTPHTSTT+LRGDQKTPFVFPPSSA
Sbjct: 149 EEASFNAPQDYRALIMGRVKSFQRKAAFHSLVSSWHTPHTSTTRLRGDQKTPFVFPPSSA 208

Query: 70  LVAFLNKPSSLLCAAFLIE--------------------AMRDLFKYCKRKGLLIDLGGE 129
           L AFLNKPSSLLCAAFLIE                    AMRDLFKYCKRKGLLI+LGGE
Sbjct: 209 LAAFLNKPSSLLCAAFLIEATGLTPQAEFYGRERCNKKLAMRDLFKYCKRKGLLIELGGE 268

Query: 130 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAIELFIEIQKHIAHFLH-- 189
           AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGA+EL IEIQK IAHFL   
Sbjct: 269 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAVELLIEIQKRIAHFLQSG 328

Query: 190 ------IAHSHKILARAGEA---------------------------------STACHLR 249
                  A +  I AR+                                     TACHLR
Sbjct: 329 LNLWVGFAGTTTIAARSTVEFPGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLR 388

Query: 250 SAIHSNIRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTVGVRSPQVSVLWGTVEHIR 302
           SAIHSN RNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGT GVRSPQVSVLWGTV+HIR
Sbjct: 389 SAIHSNFRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIR 448

[Close]

BLAST of ClCG06G008570.1 vs. NCBI nr
Match: ADK56486.1 (maturase, partial [Momordica cochinchinensis])

HSP 1 Score: 480.7 bits (1236), Expect = 1.1e-131
Identity = 264/353 (74.79%), Postives = 272/353 (77.05%), Query Frame = 0


Query: 10  QEASFNAPQDYRALIIGRVKSFQRKVAFHSFVSSWHTPHTSTTQLRGDQKTPFVFPPSSA 69
           +EASFNAPQDYRALI+GRVKSFQRK AFHS VSSWHTPHTSTT+LRGDQKTPFVFPPSSA
Sbjct: 101 EEASFNAPQDYRALIMGRVKSFQRKAAFHSLVSSWHTPHTSTTRLRGDQKTPFVFPPSSA 160

Query: 70  LVAFLNKPSSLLCAAFLIE--------------------AMRDLFKYCKRKGLLIDLGGE 129
           L AFLNKPSSLLCAAFLIE                    AMRDLFKYCKRKGLLI+LGGE
Sbjct: 161 LAAFLNKPSSLLCAAFLIEATGLTPQAEFYGRERCNKKLAMRDLFKYCKRKGLLIELGGE 220

Query: 130 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAIELFIEIQKHIAHFLH-- 189
           AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGA+EL IEIQK IAHFL   
Sbjct: 221 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAVELLIEIQKRIAHFLQSG 280

Query: 190 ------IAHSHKILARAGEA---------------------------------STACHLR 249
                  A +  I AR+                                     TACHLR
Sbjct: 281 LNLWVGFAGTTTIAARSTVEFPGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLR 340

Query: 250 SAIHSNIRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTVGVRSPQVSVLWGTVEHIR 302
           SAIHSN RNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGT GVRSPQVSVLWGTV+HIR
Sbjct: 341 SAIHSNFRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIR 400

[Close]

BLAST of ClCG06G008570.1 vs. ExPASy TrEMBL
Match: D5I3B6 (Maturase (Fragment) OS=Citrullus lanatus OX=3654 GN=matR PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.8e-132
Identity = 265/353 (75.07%), Postives = 273/353 (77.34%), Query Frame = 0


Query: 10  QEASFNAPQDYRALIIGRVKSFQRKVAFHSFVSSWHTPHTSTTQLRGDQKTPFVFPPSSA 69
           +EASFNAPQDYRALI+GRVKSFQRK AFHS VSSWHTPHTSTT+LRGDQKTPFVFPPSSA
Sbjct: 175 EEASFNAPQDYRALIMGRVKSFQRKAAFHSLVSSWHTPHTSTTRLRGDQKTPFVFPPSSA 234

Query: 70  LVAFLNKPSSLLCAAFLIE--------------------AMRDLFKYCKRKGLLIDLGGE 129
           L AFLNKPSSLLCAAFLIE                    AMRDLFKYCKRKGLLI+LGGE
Sbjct: 235 LAAFLNKPSSLLCAAFLIEATGLTPQAEFYGRERCNKKLAMRDLFKYCKRKGLLIELGGE 294

Query: 130 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAIELFIEIQKHIAHFLH-- 189
           AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGA+EL IEIQK IAHFL   
Sbjct: 295 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAVELLIEIQKRIAHFLQSG 354

Query: 190 ------IAHSHKILARAGEA---------------------------------STACHLR 249
                  A +  I AR+                                     TACHLR
Sbjct: 355 LNLWVGFAGTTTIAARSTVEFLGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLR 414

Query: 250 SAIHSNIRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTVGVRSPQVSVLWGTVEHIR 302
           SAIHSN RNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGT GVRSPQVSVLWGTV+HIR
Sbjct: 415 SAIHSNFRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIR 474

[Close]

BLAST of ClCG06G008570.1 vs. ExPASy TrEMBL
Match: A0A7D6C8J7 (Maturase OS=Luffa acutangula OX=56866 GN=matR PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 5.3e-132
Identity = 264/353 (74.79%), Postives = 272/353 (77.05%), Query Frame = 0


Query: 10  QEASFNAPQDYRALIIGRVKSFQRKVAFHSFVSSWHTPHTSTTQLRGDQKTPFVFPPSSA 69
           +EASFNAPQDYRALI+GRVKSFQRK AFHS VSSWHTPHTSTT+LRGDQKTPFVFPPSSA
Sbjct: 176 EEASFNAPQDYRALIMGRVKSFQRKAAFHSLVSSWHTPHTSTTRLRGDQKTPFVFPPSSA 235

Query: 70  LVAFLNKPSSLLCAAFLIE--------------------AMRDLFKYCKRKGLLIDLGGE 129
           L AFLNKPSSLLCAAFLIE                    AMRDLFKYCKRKGLLI+LGGE
Sbjct: 236 LAAFLNKPSSLLCAAFLIEATGLTPQAEFYGRERCNKKLAMRDLFKYCKRKGLLIELGGE 295

Query: 130 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAIELFIEIQKHIAHFLH-- 189
           AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGA+EL IEIQK IAHFL   
Sbjct: 296 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAVELLIEIQKRIAHFLQSG 355

Query: 190 ------IAHSHKILARAGEA---------------------------------STACHLR 249
                  A +  I AR+                                     TACHLR
Sbjct: 356 LNLWVGFAGTTTIAARSTVEFPGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLR 415

Query: 250 SAIHSNIRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTVGVRSPQVSVLWGTVEHIR 302
           SAIHSN RNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGT GVRSPQVSVLWGTV+HIR
Sbjct: 416 SAIHSNFRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIR 475

[Close]

BLAST of ClCG06G008570.1 vs. ExPASy TrEMBL
Match: E2EZQ5 (Maturase (Fragment) OS=Momordica parvifolia OX=703381 GN=matR PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 5.3e-132
Identity = 264/353 (74.79%), Postives = 272/353 (77.05%), Query Frame = 0


Query: 10  QEASFNAPQDYRALIIGRVKSFQRKVAFHSFVSSWHTPHTSTTQLRGDQKTPFVFPPSSA 69
           +EASFNAPQDYRALI+GRVKSFQRK AFHS VSSWHTPHTSTT+LRGDQKTPFVFPPSSA
Sbjct: 101 EEASFNAPQDYRALIMGRVKSFQRKAAFHSLVSSWHTPHTSTTRLRGDQKTPFVFPPSSA 160

Query: 70  LVAFLNKPSSLLCAAFLIE--------------------AMRDLFKYCKRKGLLIDLGGE 129
           L AFLNKPSSLLCAAFLIE                    AMRDLFKYCKRKGLLI+LGGE
Sbjct: 161 LAAFLNKPSSLLCAAFLIEATGLTPQAEFYGRERCNKKLAMRDLFKYCKRKGLLIELGGE 220

Query: 130 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAIELFIEIQKHIAHFLH-- 189
           AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGA+EL IEIQK IAHFL   
Sbjct: 221 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAVELLIEIQKRIAHFLQSG 280

Query: 190 ------IAHSHKILARAGEA---------------------------------STACHLR 249
                  A +  I AR+                                     TACHLR
Sbjct: 281 LNLWVGFAGTTTIAARSTVEFPGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLR 340

Query: 250 SAIHSNIRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTVGVRSPQVSVLWGTVEHIR 302
           SAIHSN RNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGT GVRSPQVSVLWGTV+HIR
Sbjct: 341 SAIHSNFRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIR 400

[Close]

BLAST of ClCG06G008570.1 vs. ExPASy TrEMBL
Match: E2EZQ4 (Maturase (Fragment) OS=Momordica cochinchinensis OX=3674 GN=matR PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 5.3e-132
Identity = 264/353 (74.79%), Postives = 272/353 (77.05%), Query Frame = 0


Query: 10  QEASFNAPQDYRALIIGRVKSFQRKVAFHSFVSSWHTPHTSTTQLRGDQKTPFVFPPSSA 69
           +EASFNAPQDYRALI+GRVKSFQRK AFHS VSSWHTPHTSTT+LRGDQKTPFVFPPSSA
Sbjct: 101 EEASFNAPQDYRALIMGRVKSFQRKAAFHSLVSSWHTPHTSTTRLRGDQKTPFVFPPSSA 160

Query: 70  LVAFLNKPSSLLCAAFLIE--------------------AMRDLFKYCKRKGLLIDLGGE 129
           L AFLNKPSSLLCAAFLIE                    AMRDLFKYCKRKGLLI+LGGE
Sbjct: 161 LAAFLNKPSSLLCAAFLIEATGLTPQAEFYGRERCNKKLAMRDLFKYCKRKGLLIELGGE 220

Query: 130 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAIELFIEIQKHIAHFLH-- 189
           AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGA+EL IEIQK IAHFL   
Sbjct: 221 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAVELLIEIQKRIAHFLQSG 280

Query: 190 ------IAHSHKILARAGEA---------------------------------STACHLR 249
                  A +  I AR+                                     TACHLR
Sbjct: 281 LNLWVGFAGTTTIAARSTVEFPGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLR 340

Query: 250 SAIHSNIRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTVGVRSPQVSVLWGTVEHIR 302
           SAIHSN RNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGT GVRSPQVSVLWGTV+HIR
Sbjct: 341 SAIHSNFRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIR 400

[Close]

BLAST of ClCG06G008570.1 vs. ExPASy TrEMBL
Match: Q4W4G7 (Maturase (Fragment) OS=Luffa aegyptiaca OX=3670 GN=matR PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 5.3e-132
Identity = 264/353 (74.79%), Postives = 272/353 (77.05%), Query Frame = 0


Query: 10  QEASFNAPQDYRALIIGRVKSFQRKVAFHSFVSSWHTPHTSTTQLRGDQKTPFVFPPSSA 69
           +EASFNAPQDYRALI+GRVKSFQRK AFHS VSSWHTPHTSTT+LRGDQKTPFVFPPSSA
Sbjct: 149 EEASFNAPQDYRALIMGRVKSFQRKAAFHSLVSSWHTPHTSTTRLRGDQKTPFVFPPSSA 208

Query: 70  LVAFLNKPSSLLCAAFLIE--------------------AMRDLFKYCKRKGLLIDLGGE 129
           L AFLNKPSSLLCAAFLIE                    AMRDLFKYCKRKGLLI+LGGE
Sbjct: 209 LAAFLNKPSSLLCAAFLIEATGLTPQAEFYGRERCNKKLAMRDLFKYCKRKGLLIELGGE 268

Query: 130 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAIELFIEIQKHIAHFLH-- 189
           AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGA+EL IEIQK IAHFL   
Sbjct: 269 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAVELLIEIQKRIAHFLQSG 328

Query: 190 ------IAHSHKILARAGEA---------------------------------STACHLR 249
                  A +  I AR+                                     TACHLR
Sbjct: 329 LNLWVGFAGTTTIAARSTVEFPGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLR 388

Query: 250 SAIHSNIRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTVGVRSPQVSVLWGTVEHIR 302
           SAIHSN RNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGT GVRSPQVSVLWGTV+HIR
Sbjct: 389 SAIHSNFRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIR 448

[Close]

BLAST of ClCG06G008570.1 vs. TAIR 10
Match: ATMG00520.1 (Intron maturase, type II family protein )

HSP 1 Score: 438.0 bits (1125), Expect = 7.6e-123
Identity = 245/353 (69.41%), Postives = 256/353 (72.52%), Query Frame = 0


Query: 10  QEASFNAPQDYRALIIGRVKSFQRKVAFHSFVSSWHTPHTSTTQLRGDQKTPFVFPPSSA 69
           +EASFNAPQD RA+I+G VKS QRK AFHS VSSWHTP TST +LRGDQK PFVFPPSSA
Sbjct: 171 EEASFNAPQDNRAIIVGSVKSMQRKAAFHSLVSSWHTPPTSTLRLRGDQKRPFVFPPSSA 230

Query: 70  LVAFLNKPSSLLCAAFLIE--------------------AMRDLFKYCKRKGLLIDLGGE 129
           L  FLNKPSSLLCAAFLIE                    AMRDL KYCKRKGLLI+LGGE
Sbjct: 231 LAVFLNKPSSLLCAAFLIEAAGLTPKAEFYGGERCNNNWAMRDLLKYCKRKGLLIELGGE 290

Query: 130 AILVIRSERRLARKQAPLKTHYLIRICYARYADDLLLGIVGAIELFIEIQKHIAHFLH-- 189
           AILVIRSER LARKQAPLKTHYLIRICYARYADDLLLGIVGA+EL IEIQK IAHFL   
Sbjct: 291 AILVIRSERGLARKQAPLKTHYLIRICYARYADDLLLGIVGAVELLIEIQKRIAHFLQSG 350

Query: 190 ------IAHSHKILARAGEA---------------------------------STACHLR 249
                  A S  I AR+                                     TACHLR
Sbjct: 351 LNLWVGSAGSTTIAARSTVEFLGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLR 410

Query: 250 SAIHSNIRNLGNSIPIKELTKGMSQTGSLLDGVQLAETLGTVGVRSPQVSVLWGTVEHIR 302
           SAIHS  RNLG+SIPIK+LTKGMS+TGSL DGVQLAETLGT GVRSPQVSVLWGTV+HIR
Sbjct: 411 SAIHSKFRNLGDSIPIKQLTKGMSKTGSLQDGVQLAETLGTAGVRSPQVSVLWGTVKHIR 470

The following BLAST results are available for this feature:

BLAST of ClCG06G008570.1 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_003587246.1	3.8e-132	75.07	maturase, partial [Citrullus lanatus] >ACV96636.1 maturase, partial [Citrullus l...	[more]
YP_009913627.1	1.1e-131	74.79	maturase [Luffa acutangula] >QLJ93010.1 maturase [Luffa acutangula]	[more]
ADK56487.1	1.1e-131	74.79	maturase, partial [Momordica parvifolia]	[more]
AAQ08728.1	1.1e-131	74.79	maturase, partial [Luffa aegyptiaca]	[more]
ADK56486.1	1.1e-131	74.79	maturase, partial [Momordica cochinchinensis]	[more]

BLAST of ClCG06G008570.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG06G008570.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
D5I3B6	1.8e-132	75.07	Maturase (Fragment) OS=Citrullus lanatus OX=3654 GN=matR PE=4 SV=1	[more]
A0A7D6C8J7	5.3e-132	74.79	Maturase OS=Luffa acutangula OX=56866 GN=matR PE=4 SV=1	[more]
E2EZQ5	5.3e-132	74.79	Maturase (Fragment) OS=Momordica parvifolia OX=703381 GN=matR PE=4 SV=1	[more]
E2EZQ4	5.3e-132	74.79	Maturase (Fragment) OS=Momordica cochinchinensis OX=3674 GN=matR PE=4 SV=1	[more]
Q4W4G7	5.3e-132	74.79	Maturase (Fragment) OS=Luffa aegyptiaca OX=3670 GN=matR PE=4 SV=1	[more]

BLAST of ClCG06G008570.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00520.1	7.6e-123	69.41	Intron maturase, type II family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33642	COX1/OXI3 INTRON 1 PROTEIN-RELATED	coord: 102..168
None	No IPR available	PANTHER	PTHR33642:SF5	MATURASE	coord: 102..168
None	No IPR available	PANTHER	PTHR33642	COX1/OXI3 INTRON 1 PROTEIN-RELATED	coord: 182..309
None	No IPR available	PANTHER	PTHR33642:SF5	MATURASE	coord: 182..309

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG06G008570	ClCG06G008570	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG06G008570.1-exon	ClCG06G008570.1-exon-CG_Chr06:12685081..12685233	exon
ClCG06G008570.1-exon	ClCG06G008570.1-exon-CG_Chr06:12685243..12685622	exon
ClCG06G008570.1-exon	ClCG06G008570.1-exon-CG_Chr06:12685648..12686166	exon
ClCG06G008570.1-exon	ClCG06G008570.1-exon-CG_Chr06:12695443..12695473	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG06G008570.1-cds	ClCG06G008570.1-cds-CG_Chr06:12685081..12685233	CDS
ClCG06G008570.1-cds	ClCG06G008570.1-cds-CG_Chr06:12685243..12685622	CDS
ClCG06G008570.1-cds	ClCG06G008570.1-cds-CG_Chr06:12685648..12686166	CDS
ClCG06G008570.1-cds	ClCG06G008570.1-cds-CG_Chr06:12695443..12695473	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG06G008570.1	ClCG06G008570.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000959	mitochondrial RNA metabolic process
biological_process	GO:0006397	mRNA processing
biological_process	GO:0090351	seedling development
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle