ClCG05G011850.1 (mRNA) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAATACGCCCCGTTCTCCTTGCTACGCTGGAGGTTGGAGGACATATCGGATATAGATTGACACTACCTCAATATGTCCCTCGTGTTCCTTACTGCGCTGGGTCCTAAGCCACGTCGGGTAAAGATTGGCACTTCATCAATACGCCCCCCGTGTTCCTTACTGTGCTGGGTCCTAAGGCAAGTCGGGTAAAGATTCACACTACGTCAACACGCCATGTGCTCCTTGCTACGCTAGAGGTCAGAGGACACGTTGGGTATAGATTGGCACTACGTCAATATGCCCTCGTGTTCCTTAATGCGTTGGATCCTAAGGCACGTCGGGTAAAGATTGACACTACGTCAATACACCCATGCTCCTTGCTACGTTGGAGGTCAAAGGACACATCGGGTATAGTTTGGTACTACATCAATATGCCCTGGGTTCTTTTCTACACTAGAGGTTGGAGGACACGTCAGGTATAGATTGACACTACGTCAATACGCCCTCATGTTCCTTACTGTGTTGGGTCCTAAGGCACGTCGAGTAAAGATTGGCACTACGTCAATACGCCCCATACTCCTTGCTACGCTAGAGGTCGGAGGACACATTGGGTATAGATTGACACTACGTCAATACGACCCATGCTCCTCTCTTTATAGTGCATTGGCCTCTGAGTGACACTAACATGCTTTCTTCTCTTGCCCCTTTTATTATAGACCTCTCATTGCCTCCGTTTTATTTGCTCATTTTCTTCATTTTATTATTATGTTCTTTTTTTTTTATATGAAATTAGTTGTCTCTTTTTTTAAAAAAAAAAAAAAAAACTTATTTTGTTTTCACTCTTATTGTCAACAAACCTTTTTTTTGTCACATAATTTTTTTTTTAATAATAACTTCTTTAATTGTTTCTAGAGCTTGAGCACCCCAAACTTGAACCTGAAGTTGGAGCACACCAAACTTAAACAACCTCAAACTTGAGGATAGAGCACACTTAACTCCAACTTGATGATAAATCACACTAGACTTGAACAAACTTCAACTAGATTGGAGTTGACTTTGGAGATGGAGGCGAGCCGACGGAGGCACATCGATCTTATACTTGAAGATGGAGCGAAGCGCCACACCAACCTTGTTTGTGAAGATGAAGCAGAGTGGAACCAAGCACACTGATCTCGTACTTGAAGATGGAGTGAAGCTGCACCAACAAATTGAAGATTAAGCGAATTCACGCCAATATTTGGTAAAGGAGACAGAGCTGCACCAACATTCTGGAGATGGAACAAAGCTACACCAACATTTTAGAGATGGAACGAAGCTACATTTGCAATTTGGAGATGGAACAAAGCTACATCAATATTTTGAAGATGGAGTGAAGCTAAATCAACATTTTGGAGATGGAGCAAAGATACACCAACATTTTGGAAATGCGGCAAAGTTGCACTAGCATTTTGGAGATAGAGTAAATCCGCACCAGCATTTTGGAGATGTAGCGAAGATGCACCAACCTTATGGAGATGATGCAAAACTATACCAACATTTTGGAGGGGAGGCAAAGTTGCACAATATTTTGGATTTGAAGCAAAGTCGCACCAACATTTAGTAGAGGAGGTCACTGTTGACTTTTTGGCCCTTAATCTCAATTTAATTAATGGATTGAATAATGAGTGTTTTGATGATAACAAACCTGAGTTTATTTATTAACTATTTGAGTGTTTTTAAGTATCTATTGTGTGGAGCTTGGAACAACGGTTCCAATGCAATTTGAATCACTCAAATCGGAGTTCAAACGAAGAAGATATGACCGAAACAAGCTTAATGGAAAATCCCTAGATGATGACATGCCAGATTATTTTAATCAAAGTGGACAAATTGAAAGGTGTCACTTGGAGCAATGGAGAAGTGACAATTGATGGGTTTTTTATTTTTGGATTGATGTTAAAAATAAAATGATTTTAAAAAGAAAATGAATTTAAAAAAAGAAGATGAATTTAATATTATTATATATGTTTGTGTCTAACGGTTAGTTGTTTTTTAAAAAGATTAATTTAATATTATTATATGTTTGTGTCTAACGGCTATATGAGTTTAAATCTCCACCATTCAATTTTCTTTTACAAAGATCTAATGGTCCAAATTAATTTGGTTTTCACCCACTTTCATTTCTTTTTAAACACTTCATCTTCTCCAAAATTAGAAACACCAAGCCACCATTGTTGCTCTCTCTCCAAGCTTCAATTTTCTTCTTTTCATCTTATTCTTGAGAGAGATATATTGTATTGTGAGGATTTATTTGTGAAGTGCTTAAACTTGTAAATCCACTCTATTTAGAGAGTTTGTCAAGTGTGCTCTTTGTTTTTCCAAATTTTTGTTGGGTTGGCTCTTGATCCCGAGAAAAATAGTTGTTGTAACGGTTTGATCCTTAATCGTGGAAAGGATCGGATTTGTTCTTGCGCCCGGATAAAGAACGTTGTAGCGATTTGATTCGAAGCTGTGGAAAGAGTCAAAGACTTCTAGTGAAGTACCCAAAAGGAGCTTGGGAAGTGGAAGTAGGCCGGTTTTGCCGAACCACTATAAAATTCACTGTGTCATTTTCTCTATCCTTCTCCTAATTTATTTTTGCAATTAATTTTTGTTACTATATTTTATTGCATGAAATTAATTGCAATTTTTAATTCTTGAAATTAATTGCTCATATTGGTTTTTAAATTTCTATATTCATTACCAATCTTTTTTTTATTAGAATTAAACAAGGTGCTTTAAAGTGTGATTGTTAATTTCTTGTTTAATTCAAAGTGAATTTGTTTGCATAAAAAATATTGTTTAAACTACTTATTTGCAAAGAGTTTATTAATTCGCTTAATTGGGTCTAAATTAGTAAAAAGTTTAAATTAATTTTAATAAACCCTATTCACCTCCCTCCCTCCCTCCAGGGTTGCCATACCGATCCTAGAAGAGCTACACCAACATTTTGGAGATGGAGTGAAGTTGTGCCAACATTTTGGAAATGTCGTGAAGATGCACCAACATTTTGGAAATGTCGTGAAGCTGCACCAGCATTTTGGAGATGTAGTGAAGCTGCACCAGCATTTTGAAGATGTAGCAAAGATGCACCAACATTTTGGAGATGGCGCAAAGTTGTACCAGTATTCTGGAGATGGGGTGAAGCTGCATTGA ATGTCAATACGCCCCGTTCTCCTTGCTACGCTGGAGGTTGGAGGACATATCGGATATAGATTGACACTACCTCAATATGTCCCTCCCACGTCGGGTAAAGATTGGCACTTCATCAATACGCCCCCCGTGTTCCTTACTGTGCTGGGTCCTAAGGCAAGTCGGGTAAAGATTCACACTACGTCAACACGCCATGTGCTCCTTGCTACGCTAGAGGTCAGAGGACACGTTGGGTATAGATTGGCACTACGTCAATATGCCCTCGTGTTCCTTAATGCGTTGGATCCTAAGGCACGTCGGGTAAAGATTGACACTACGTCAATACACCCATGCTCCTTGCTACGTTGGAGGTCAAAGGACACATCGGGTATAGTTTGGTATAGATTGACACTACGTCAATACGCCCTCATGTTCCTTACTGTGTTGGGTCCTAAGGCACGTCGAGTAAAGATTGGCACTACGTCAATACGCCCCATACTCCTTGCTACGCTAGAGGTCGGAGGACACATTGGATGGAGGCGAGCCGACGGAGGCACATCGATCTTATACTTGAAGATGGAGCGAAGCGCCACACCAACCTTGTTTGTGAAGATGAAGCAGAGTGGAACCAAGCACACTGATCTCGTACTTGAAGATGGAGAGACAGAGCTGCACCAACATTCTGGAGATGGAACAAAGCTACACCAACATTTTAGAGATGGAACGAAGCTACATTTGCAATTTGGAGATGGAACAAAGCTACATCAATATTTTGAAGATGGACATTTTGGAGATAGAGTAAATCCGCACCAGCATTTTGGAGATGTAGCGAAGATGCACCAACCTTATGGAGATGATGCAAAACTATACCAACATTTTGGAGGGGAGGCAAAGTTGCACAATATTTTGGATTTGAAGCAAAGATCGGATTTGTTCTTGCGCCCGGATAAAGAACGTTGTAGCGATTTGATTCGAAGCTGTGGAAAGAGTCAAAGACTTCTAGTGAAGTACCCAAAAGGAGCTTGGGAAGTGGAAGTAGGCCGGGTTGCCATACCGATCCTAGAAGAGCTACACCAACATTTTGGAGATGGAGTGAAGTTGTGCCAACATTTTGGAAATGTCGTGAAGATGCACCAACATTTTGGAAATGTCGTGAAGCTGCACCAGCATTTTGGAGATGTAGTGAAGCTGCACCAGCATTTTGAAGATGTAGCAAAGATGCACCAACATTTTGGAGATGGCGCAAAGTTGTACCAGTATTCTGGAGATGGGGTGAAGCTGCATTGA ATGTCAATACGCCCCGTTCTCCTTGCTACGCTGGAGGTTGGAGGACATATCGGATATAGATTGACACTACCTCAATATGTCCCTCCCACGTCGGGTAAAGATTGGCACTTCATCAATACGCCCCCCGTGTTCCTTACTGTGCTGGGTCCTAAGGCAAGTCGGGTAAAGATTCACACTACGTCAACACGCCATGTGCTCCTTGCTACGCTAGAGGTCAGAGGACACGTTGGGTATAGATTGGCACTACGTCAATATGCCCTCGTGTTCCTTAATGCGTTGGATCCTAAGGCACGTCGGGTAAAGATTGACACTACGTCAATACACCCATGCTCCTTGCTACGTTGGAGGTCAAAGGACACATCGGGTATAGTTTGGTATAGATTGACACTACGTCAATACGCCCTCATGTTCCTTACTGTGTTGGGTCCTAAGGCACGTCGAGTAAAGATTGGCACTACGTCAATACGCCCCATACTCCTTGCTACGCTAGAGGTCGGAGGACACATTGGATGGAGGCGAGCCGACGGAGGCACATCGATCTTATACTTGAAGATGGAGCGAAGCGCCACACCAACCTTGTTTGTGAAGATGAAGCAGAGTGGAACCAAGCACACTGATCTCGTACTTGAAGATGGAGAGACAGAGCTGCACCAACATTCTGGAGATGGAACAAAGCTACACCAACATTTTAGAGATGGAACGAAGCTACATTTGCAATTTGGAGATGGAACAAAGCTACATCAATATTTTGAAGATGGACATTTTGGAGATAGAGTAAATCCGCACCAGCATTTTGGAGATGTAGCGAAGATGCACCAACCTTATGGAGATGATGCAAAACTATACCAACATTTTGGAGGGGAGGCAAAGTTGCACAATATTTTGGATTTGAAGCAAAGATCGGATTTGTTCTTGCGCCCGGATAAAGAACGTTGTAGCGATTTGATTCGAAGCTGTGGAAAGAGTCAAAGACTTCTAGTGAAGTACCCAAAAGGAGCTTGGGAAGTGGAAGTAGGCCGGGTTGCCATACCGATCCTAGAAGAGCTACACCAACATTTTGGAGATGGAGTGAAGTTGTGCCAACATTTTGGAAATGTCGTGAAGATGCACCAACATTTTGGAAATGTCGTGAAGCTGCACCAGCATTTTGGAGATGTAGTGAAGCTGCACCAGCATTTTGAAGATGTAGCAAAGATGCACCAACATTTTGGAGATGGCGCAAAGTTGTACCAGTATTCTGGAGATGGGGTGAAGCTGCATTGA MSIRPVLLATLEVGGHIGYRLTLPQYVPPTSGKDWHFINTPPVFLTVLGPKASRVKIHTTSTRHVLLATLEVRGHVGYRLALRQYALVFLNALDPKARRVKIDTTSIHPCSLLRWRSKDTSGIVWYRLTLRQYALMFLTVLGPKARRVKIGTTSIRPILLATLEVGGHIGWRRADGGTSILYLKMERSATPTLFVKMKQSGTKHTDLVLEDGETELHQHSGDGTKLHQHFRDGTKLHLQFGDGTKLHQYFEDGHFGDRVNPHQHFGDVAKMHQPYGDDAKLYQHFGGEAKLHNILDLKQRSDLFLRPDKERCSDLIRSCGKSQRLLVKYPKGAWEVEVGRVAIPILEELHQHFGDGVKLCQHFGNVVKMHQHFGNVVKLHQHFGDVVKLHQHFEDVAKMHQHFGDGAKLYQYSGDGVKLH Homology
BLAST of ClCG05G011850.1 vs. NCBI nr
Match: XP_038887242.1 (LWamide neuropeptides-like [Benincasa hispida]) HSP 1 Score: 94.4 bits (233), Expect = 2.6e-15 Identity = 64/189 (33.86%), Postives = 88/189 (46.56%), Query Frame = 0
BLAST of ClCG05G011850.1 vs. NCBI nr
Match: XP_029376745.1 (serine/threonine-protein kinase VRK1-like isoform X1 [Echeneis naucrates]) HSP 1 Score: 65.9 bits (159), Expect = 9.8e-07 Identity = 49/186 (26.34%), Postives = 76/186 (40.86%), Query Frame = 0
BLAST of ClCG05G011850.1 vs. NCBI nr
Match: XP_029376746.1 (serine/threonine-protein kinase VRK1-like isoform X2 [Echeneis naucrates]) HSP 1 Score: 61.2 bits (147), Expect = 2.4e-05 Identity = 30/81 (37.04%), Postives = 43/81 (53.09%), Query Frame = 0
BLAST of ClCG05G011850.1 vs. NCBI nr
Match: XP_041829378.1 (proline-rich protein 36-like [Melanotaenia boesemani]) HSP 1 Score: 58.5 bits (140), Expect = 1.6e-04 Identity = 70/258 (27.13%), Postives = 92/258 (35.66%), Query Frame = 0
BLAST of ClCG05G011850.1 vs. NCBI nr
Match: EDO28042.1 (predicted protein, partial [Nematostella vectensis]) HSP 1 Score: 57.4 bits (137), Expect = 3.5e-04 Identity = 50/209 (23.92%), Postives = 84/209 (40.19%), Query Frame = 0
BLAST of ClCG05G011850.1 vs. ExPASy TrEMBL
Match: A0A665TGK9 (Serine/threonine-protein kinase VRK1-like OS=Echeneis naucrates OX=173247 GN=LOC115055234 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.7e-07 Identity = 49/186 (26.34%), Postives = 76/186 (40.86%), Query Frame = 0
BLAST of ClCG05G011850.1 vs. ExPASy TrEMBL
Match: A0A0F8B3F7 (Uncharacterized protein OS=Larimichthys crocea OX=215358 GN=EH28_02027 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 6.8e-06 Identity = 46/217 (21.20%), Postives = 81/217 (37.33%), Query Frame = 0
BLAST of ClCG05G011850.1 vs. ExPASy TrEMBL
Match: A7T7K9 (Predicted protein (Fragment) OS=Nematostella vectensis OX=45351 GN=v1g148992 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.7e-04 Identity = 50/209 (23.92%), Postives = 84/209 (40.19%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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