ClCG05G003360.2 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG05G003360.2
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr05: 3191350 .. 3193159 (-)
Sequence length507
RNA-Seq ExpressionClCG05G003360.2
SyntenyClCG05G003360.2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCTTTGAGCTATCAATACATCCTGGTGTGGCAGCTATGGAAGCTCGAAATAAAGTGGTTTTCGAGTCAGCCGACTGATCCTAAGTTTATTTCAGACCCTTGCTTTCTTGGTGTGGAGATCAATAACAGAAGAAAGAGGTCGTTACATCCTATCTCTATTCATGCTCAGGTTGGTTAGCGCTCCCTTGTTCCATTCTTTTGAAAGTTGAATACTAATGTGGCATGGAGTGTCAATTCCAATTCAGGTGGATTGGGTTGGGTGCTTCCTCACCATTTGGGATGTTTAAAATTTATTTCCAATTGCTAGAAGGTGAAGATTTAAGAATCTACGACGTTTTCCTTTGGGCTTGAGACTCCGTCTTCAATTAGTATGTCGAATATTTTAGTGGAGTTTGCTTGCTTGGAGGTTATCAATCTACTGAATGATGTAGTTGTCAACTATTTTGAAGCGTCATTTTTTCCTAAAGAGGCAAAGGTCAGAGGTGGGGAGCTATGAGTTGTCTCCTTTTCTCATGTTTGGCATAATCAGAACGTGTTGACTCACTGTATTGCACATAAAACTTTGGAGGATCGTGTATCTTCAATTCTTACACCTCCTTATCTTAAATTGTTTGCTTAGATTATGTATTGGGATATTTTTGTTTAGTTGTTTGATTTGGTTGTATTGCTTTTTTCCTTAAAAATAAAAAATAAAATAAAAAAGTCGCACAAATTATTCTAAGCTATTAAGTGAAAAAGAAATAGATATATAAAATAAATTTTAATTTTAAAAGATAAAATAAAACAATTAATTTAAAAAATGTGCCTGACGTTAGACAATCCAAAAATTTGTACGAAACTTTTTTTAAAATAGATAGGAAATCAACATGTTTTTCAAAAGTAATTTTAACAGCTTAATTTACAATAAAATAAAGAAATAATAAAAATGAAAATAAAAAAATCAATATTTATTTATTTTTATAATTACTATTATTCCTAAAAAAAACTCAAACAAACCTCAATTAATTAGGGTGGGTTTGATTTAACTTTTTAAGGGTTTAATTTTGAAAATAAATCATCTTAGATGGCAAGTGACAACCACTTAAAATAATTTTTAAAACGCTTTCAACTATATTTTACACAACTTTTATCAAAAGAGTTTAAATAATAATAATTTTTTAAAAAAATATTTTTTTTCTCTAATCAACTTAAATGATACATAGTAATCTATAATTTGTTAAACATTACAATCATATCCCTGTATTAGTATTTATATTAAATTTTGATACCTAATATCATCAACATTAATATTTCAATCATTGTAATGTCGAATTCATGTATTTACCTCATGTCAATATTTTAATAGTTTAAACCGGAGGGAACTCTCAACTCTGGAAGTATGCAAGTCGATAAGCAGCTGCATCTTCCATATTTTCCGGACCTCCGCTTCGGCCGGAGGTCGGACGACCTCGCCGACGACGGACTCTGCTGCCGGAATCTAGCGGTTTCGATCGATTTCAGTTCTATCACCGTTGAAGGCGAAGGCGATTGGAATAATCTGTTTGGAAATTTCTGGTTCGATATCTTCACTTGGTATGTACTGTCTTTTTGTCCGACGCATTTACAATACCTCACATTCTCGAGCATTTTTTTCCGTTTCTTTCATATTTCTATTCGTGCATTTTGTGAATTTTTCTTCCATGATTTATGCCGCTCTCAGCTATTCTGTACAAATAGTGCGACATTTGCGACTATCCAGTTTTCATAATCTGTGGGTTTTAACACGCTGGTCCGGTCTTGGGTTCTTCATCACAAATTTGGTTTAG

mRNA sequence

ATGGCTCCTTTGAGCTATCAATACATCCTGGTGTGGCAGCTATGGAAGCTCGAAATAAAGTGGTTTTCGAGTCAGCCGACTGATCCTAAGTTTATTTCAGACCCTTGCTTTCTTGGTGTGGAGATCAATAACAGAAGAAAGAGGTCGTTACATCCTATCTCTATTCATGCTCAGTTTAAACCGGAGGGAACTCTCAACTCTGGAAGTATGCAAGTCGATAAGCAGCTGCATCTTCCATATTTTCCGGACCTCCGCTTCGGCCGGAGGTCGGACGACCTCGCCGACGACGGACTCTGCTGCCGGAATCTAGCGGTTTCGATCGATTTCAGTTCTATCACCGTTGAAGGCGAAGGCGATTGGAATAATCTGTTTGGAAATTTCTGGTTCGATATCTTCACTTGCTATTCTGTACAAATAGTGCGACATTTGCGACTATCCAGTTTTCATAATCTGTGGGTTTTAACACGCTGGTCCGGTCTTGGGTTCTTCATCACAAATTTGGTTTAG

Coding sequence (CDS)

ATGGCTCCTTTGAGCTATCAATACATCCTGGTGTGGCAGCTATGGAAGCTCGAAATAAAGTGGTTTTCGAGTCAGCCGACTGATCCTAAGTTTATTTCAGACCCTTGCTTTCTTGGTGTGGAGATCAATAACAGAAGAAAGAGGTCGTTACATCCTATCTCTATTCATGCTCAGTTTAAACCGGAGGGAACTCTCAACTCTGGAAGTATGCAAGTCGATAAGCAGCTGCATCTTCCATATTTTCCGGACCTCCGCTTCGGCCGGAGGTCGGACGACCTCGCCGACGACGGACTCTGCTGCCGGAATCTAGCGGTTTCGATCGATTTCAGTTCTATCACCGTTGAAGGCGAAGGCGATTGGAATAATCTGTTTGGAAATTTCTGGTTCGATATCTTCACTTGCTATTCTGTACAAATAGTGCGACATTTGCGACTATCCAGTTTTCATAATCTGTGGGTTTTAACACGCTGGTCCGGTCTTGGGTTCTTCATCACAAATTTGGTTTAG

Protein sequence

MAPLSYQYILVWQLWKLEIKWFSSQPTDPKFISDPCFLGVEINNRRKRSLHPISIHAQFKPEGTLNSGSMQVDKQLHLPYFPDLRFGRRSDDLADDGLCCRNLAVSIDFSSITVEGEGDWNNLFGNFWFDIFTCYSVQIVRHLRLSSFHNLWVLTRWSGLGFFITNLV
Homology
The following BLAST results are available for this feature:
BLAST of ClCG05G003360.2 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG05G003360.2 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG05G003360.2 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG05G003360.2 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG05G003360ClCG05G003360gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG05G003360.2-exonClCG05G003360.2-exon-CG_Chr05:3191350..3191455exon
ClCG05G003360.2-exonClCG05G003360.2-exon-CG_Chr05:3191583..3191809exon
ClCG05G003360.2-exonClCG05G003360.2-exon-CG_Chr05:3192986..3193159exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG05G003360.2-cdsClCG05G003360.2-cds-CG_Chr05:3191350..3191455CDS
ClCG05G003360.2-cdsClCG05G003360.2-cds-CG_Chr05:3191583..3191809CDS
ClCG05G003360.2-cdsClCG05G003360.2-cds-CG_Chr05:3192986..3193159CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG05G003360.2ClCG05G003360.2-proteinpolypeptide