ClCG04G006350.2 (mRNA) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCGCTTTTGGTTCTCAATTCCACCCCCTGCTCCGGCGACTCTTCCCCTTTGAACCTCAACAAGTCTGCTGCTGTTCCTCTCCGCTCCCGCCCCTCTTCGTCTCTGCGGCTCCATCCCTTGATGGGTTTTGGTGCTTGTAAGGTTTCCTTTGTGGCTAACATTTTTCCGCGTAATGGGTTTCTCTCACCGTATCGAAAATGTTCGTTGAATCGACGGATTCTGGCATTTGCCGCGTCGCATGAAGAGTCGGTATGTCGAATTCTGTTCACTTATGTCACTGCGTTAAATTGTGGGTGTTTATTGGAATTGGGGTTAGGGTTGAGCATTCTGTAGAATTTAGGATACTTTATGATATCGGCTTGAGAGTGTGGGATTTTGTTTCTCTGATTATGACTTGAGTGGTTACTGAATGTTACTTGGAGAATGAGGTCTGTGGTTTAGTAATTCATATGTGTATTATGAATTACACTGTGGAGAAGTCAAATTAAAGTCTTAGAAATTTATAGTTATTTAAAATTTAAATTGTTTTATCTATATGACATGTGATCAGTAATCTAGCCATATCTACATTGTCCAGCCAAGCCTTGTTGAATAATAATGGCTTTTTTGGCACTCAAGGTTTTTTTAAGGCCAAAATTTGCATGAAAGATATGGTAATTCATTTATTTGAAAGGAGACATTATCCTTCAACTCTTACGATGGTAATAATATGTATACATACAAGTTTCGAGCTTGAGGAAGTGAAGATTTTCTCATGGTATATTCTTTCATTTCTTCTTGATGAAAGCTTGGCTTCTTACCAGAAATAATAATAGTCAATAATTGCCTGACTGGTTTTTGATATTCAGGTTTAGTATCACATTAGCTGAAAATGCTGGGTGCTTATTTTAGTTATAAAATTCTGTTCACATGCTAAACATGATTACTGACTTTTCAAGTGGTGTAGTTGATTATATGCATTGAAATGTAGATTGATAGGCCCCTTTGTTTTCCTATTTGTATAACTAGCATTCAGAAATTCAAGGGGAGAAGGACGGAAAAGATTCCAATTTTGATGCGGTAAAGGCACAAGAGTTGTGGAAAAATGCTTTGGATTCTTTTAAAGAACAAGCTCTGAAGATGAAAGCGATTTCAAAGGATGCGTATGATGAATACTCTGAGAAAGCATTAATTGCTCTGAATGAAACTTCAAAGCTTTTGAAAATTCAAGCTGATAAGGCAAAGGATGATTTGGCTTTAATAGTGCAAGAATTCAGTGAAGATGGCAAAGAATATATTGCCACTGTCACAGAGAATTATCCTGAAGAAGTCAAGGAGATTGTGGAAACATTTACTTCTCCAACTGACGACTTAAGTGATATTTCGAAAGTTCATGAATTCTATTATGGGATACCATATGGTATGTATTAGCAAACTTGATGTGAGGTTTGAATGGAGTAGGGTCAGCTATGCTTTAGTACAACCAGTTATTTCTTCTTCTACTTGAGTAATCCATCCAAGTCAAATTTAAATTTGGAGGGGAACAAACCTTCGATAGGATAATTGGAAGGAATTTAATATCTGTAAATTTGCAACATTTTCCTTTCAAGATTCTATCTATGACTCGTTTAGTGGAGTAATGTTTTTGCATCAATTTATCTAGTCCTGTGGCTTATAAATCTCCTGCTGACCCTTTTTTTTTCTTACCTTTTATGCTGATGGTCTACAGGACTGGTCCTTTCTTTTGGTGGTTTTCTTTCCTTCATGCTAACGGGAAGTCTTGCTGCAATTAGATTTGGAGTGATACTTGGTGGTGCTTTGTTGGTGTTGAGTATTTTAAGCTTGCAGGCATACAAAAGAGGACAATCACTTCCACTTGCCCTGAAGGGCCAGGCAGGTCAGTCTGCCATAAATTCAATAACATAACATGTGTAACATAAACGAATGTCACTTTTGGTTGAGTCAGCATTTTGGTCTTGAATTCTACAGCATTCAAATTTGTTTTAAAATGCTTACTTGGCAAGTATTTCCTGTTGTCTTGTCATGATCACATTTTCTGAATTTTACATGCTTTATTATCTGTCATCTCAAGCTACCATATCTTTGCTAATGAAATGTAGTCAGATAAGGAGGATGGTAGATTTAAGGACTATGACGTGTAATGAATTGTTTTCTTCTTGCCTTAAGTCATACGATAAGTCTTCTAGCCTTATATTGTAGCTTCACCTCACTAATTGCTACACACATTATCTATCATCTTAAGCTACCATATCTTTGCTAATGAAATTTAGTCAGATAAGGAGGATGGTAGATTGAAGGACTGTGAAGTGTAATGAGTTGTTTTCTTCTTCTTGCCTTAAGTCATATGATAAGTCTTCTGGCCTTATATTGTAGCTTCACCTCAGTAATTGCTGCACACATTTTCTGAGTCCCATTCCTTTTGAGTTCATCAGTTTTGAGTCATCTGATCAGTTTTCTTTTCTTAGAAGTATTTTTTTAAATGTTTCAAGGTGTTTTTGTGTAACAGTGATTGCAAGTATTCTATTTCTTAGAGAGTTGCGCTTGCTGTTTCAGGTGAGAACCCTGGATACTAACTAATTTACATGGTGAATGAGTTTTTCTGATAGTTTCTTTTTGTTTTCTCTCATATTCTCTCTCTTTCTCAATGCAGAGACCATCATTTGTTAGTCTTCTGACTACTTTGATCAGGTTTATATCTTTTCTTACTTCATTCTTCTCATGTTCATTATTTGCTTCTGCTGGATGGATGGCCAGCTGGCTAGTTTGCAGTACTATGATTTTTTCTTCATTTGCTTAGATATCTTAGCATGTAGTGAAAAATCCCCAAGGTTAAGCCTCTTCATTTATATTTATTTAGCAAGAAAGTACTTGACCTTTGGTAGTTAGATTCACTAATATTCTTAGCCTTTCTGCTGATAAATCTAAATCAAATGTATACTTTGCTTTCTCCACCTTTGTTTTCTGTTTTTCCCCTTTTAATGAGAAGTTTGTTTTATATGCTGATTGTATTAGCTGTCTTGTTTCACCCACCCTGCATTGATTAGCCAGCCATGGTTGCTGTATCCTCAACTTTGATGGATTGTTGGCTGAGACTTTTCTTTTTCTGTGCAGTGCAACTATGGTCTCATTATATGTCTATAGGATCACGCTGAATGCTCGTCTCAAAAAGGGAAAAGATCTTAAAACAGAATGAAAACTAGTCAGGTGTGCTACTTTTTATGCATATATGGACACTCCCAAGTCGATAGGTCACTAGATAAAGGCAGTTGCCACAGTCTATCTTCCTGACCAATTGATTTTAATGGAGAACCCCTGAATTTCTGTCCTGATTCAATTTTTCTTTTTACTTGTAGGAAAAAGTTTGCCAAATCTCCGTATCTTCACAATCTGATAACCACAATTAGCCTACTTGAAGAGAATAGTTTCTGCTGGTTCAGTAAAAGAAAAGAAAAGAAAAGAACAACCCTTGGAGAGAAATGGTATGATGCTCTGCTAAGGCTAAGAGTTTGTTCTCCAAGTCCAGGAAAAAGGGTATGGAAATTTGGATTATGATTAAGTTTGATGGTAGGGTAGCTGGCAAACTTTGTTCTATTTTTACTTAATATGTAGGCAGCTAGCTGGTTTAAGAGCATCAAAGAAATGGATTTAGCTCTTTCTGTTTTTTGGGGTTCATTTTTCTCTTTTATTGAGTGGCGACAACATTGTGAAGGAGCCAGACTGAGAAGAAGAGATGTGGCCAAATCATTGGAAAAACCTGGCAACTCCCAAGTAATTTGA ATGGAGTCGCTTTTGGTTCTCAATTCCACCCCCTGCTCCGGCGACTCTTCCCCTTTGAACCTCAACAAGTCTGCTGCTGTTCCTCTCCGCTCCCGCCCCTCTTCGTCTCTGCGGCTCCATCCCTTGATGGGTTTTGGTGCTTGTAAGGTTTCCTTTGTGGCTAACATTTTTCCGCGTAATGGGTTTCTCTCACCGTATCGAAAATGTTCGTTGAATCGACGGATTCTGGCATTTGCCGCGTCGCATGAAGAGTCGCATTCAGAAATTCAAGGGGAGAAGGACGGAAAAGATTCCAATTTTGATGCGGTAAAGGCACAAGAGTTGTGGAAAAATGCTTTGGATTCTTTTAAAGAACAAGCTCTGAAGATGAAAGCGATTTCAAAGGATGCGTATGATGAATACTCTGAGAAAGCATTAATTGCTCTGAATGAAACTTCAAAGCTTTTGAAAATTCAAGCTGATAAGGCAAAGGATGATTTGGCTTTAATAGTGCAAGAATTCAGTGAAGATGGCAAAGAATATATTGCCACTGTCACAGAGAATTATCCTGAAGAAGTCAAGGAGATTGTGGAAACATTTACTTCTCCAACTGACGACTTAAGTGATATTTCGAAAGTTCATGAATTCTATTATGGGATACCATATGGACTGGTCCTTTCTTTTGGTGGTTTTCTTTCCTTCATGCTAACGGGAAGTCTTGCTGCAATTAGATTTGGAGTGATACTTGGTGGTGCTTTGTTGGTGTTGAGTATTTTAAGCTTGCAGGCATACAAAAGAGGACAATCACTTCCACTTGCCCTGAAGGGCCAGGCAGTGATTGCAAGTATTCTATTTCTTAGAGAGTTGCGCTTGCTGTTTCAGAGACCATCATTTGTTAGTCTTCTGACTACTTTGATCAGTGCAACTATGGTGTGCTACTTTTTATGCATATATGGACACTCCCAAGTCGATAGGAAAAAGTTTGCCAAATCTCCGTATCTTCACAATCTGATAACCACAATTAGCCTACTTGAAGAGAATAGTTTCTGCTGGTTCAGTAAAAGAAAAGAAAAGAAAAGAACAACCCTTGGAGAGAAATGGTATGATGCTCTGCTAAGGCTAAGAGTTTGTTCTCCAAGTCCAGGAAAAAGGGCAGCTAGCTGGTTTAAGAGCATCAAAGAAATGGATTTAGCTCTTTCTGTTTTTTGGGGTTCATTTTTCTCTTTTATTGAGTGGCGACAACATTGTGAAGGAGCCAGACTGAGAAGAAGAGATGTGGCCAAATCATTGGAAAAACCTGGCAACTCCCAAGTAATTTGA ATGGAGTCGCTTTTGGTTCTCAATTCCACCCCCTGCTCCGGCGACTCTTCCCCTTTGAACCTCAACAAGTCTGCTGCTGTTCCTCTCCGCTCCCGCCCCTCTTCGTCTCTGCGGCTCCATCCCTTGATGGGTTTTGGTGCTTGTAAGGTTTCCTTTGTGGCTAACATTTTTCCGCGTAATGGGTTTCTCTCACCGTATCGAAAATGTTCGTTGAATCGACGGATTCTGGCATTTGCCGCGTCGCATGAAGAGTCGCATTCAGAAATTCAAGGGGAGAAGGACGGAAAAGATTCCAATTTTGATGCGGTAAAGGCACAAGAGTTGTGGAAAAATGCTTTGGATTCTTTTAAAGAACAAGCTCTGAAGATGAAAGCGATTTCAAAGGATGCGTATGATGAATACTCTGAGAAAGCATTAATTGCTCTGAATGAAACTTCAAAGCTTTTGAAAATTCAAGCTGATAAGGCAAAGGATGATTTGGCTTTAATAGTGCAAGAATTCAGTGAAGATGGCAAAGAATATATTGCCACTGTCACAGAGAATTATCCTGAAGAAGTCAAGGAGATTGTGGAAACATTTACTTCTCCAACTGACGACTTAAGTGATATTTCGAAAGTTCATGAATTCTATTATGGGATACCATATGGACTGGTCCTTTCTTTTGGTGGTTTTCTTTCCTTCATGCTAACGGGAAGTCTTGCTGCAATTAGATTTGGAGTGATACTTGGTGGTGCTTTGTTGGTGTTGAGTATTTTAAGCTTGCAGGCATACAAAAGAGGACAATCACTTCCACTTGCCCTGAAGGGCCAGGCAGTGATTGCAAGTATTCTATTTCTTAGAGAGTTGCGCTTGCTGTTTCAGAGACCATCATTTGTTAGTCTTCTGACTACTTTGATCAGTGCAACTATGGTGTGCTACTTTTTATGCATATATGGACACTCCCAAGTCGATAGGAAAAAGTTTGCCAAATCTCCGTATCTTCACAATCTGATAACCACAATTAGCCTACTTGAAGAGAATAGTTTCTGCTGGTTCAGTAAAAGAAAAGAAAAGAAAAGAACAACCCTTGGAGAGAAATGGTATGATGCTCTGCTAAGGCTAAGAGTTTGTTCTCCAAGTCCAGGAAAAAGGGCAGCTAGCTGGTTTAAGAGCATCAAAGAAATGGATTTAGCTCTTTCTGTTTTTTGGGGTTCATTTTTCTCTTTTATTGAGTGGCGACAACATTGTGAAGGAGCCAGACTGAGAAGAAGAGATGTGGCCAAATCATTGGAAAAACCTGGCAACTCCCAAGTAATTTGA MESLLVLNSTPCSGDSSPLNLNKSAAVPLRSRPSSSLRLHPLMGFGACKVSFVANIFPRNGFLSPYRKCSLNRRILAFAASHEESHSEIQGEKDGKDSNFDAVKAQELWKNALDSFKEQALKMKAISKDAYDEYSEKALIALNETSKLLKIQADKAKDDLALIVQEFSEDGKEYIATVTENYPEEVKEIVETFTSPTDDLSDISKVHEFYYGIPYGLVLSFGGFLSFMLTGSLAAIRFGVILGGALLVLSILSLQAYKRGQSLPLALKGQAVIASILFLRELRLLFQRPSFVSLLTTLISATMVCYFLCIYGHSQVDRKKFAKSPYLHNLITTISLLEENSFCWFSKRKEKKRTTLGEKWYDALLRLRVCSPSPGKRAASWFKSIKEMDLALSVFWGSFFSFIEWRQHCEGARLRRRDVAKSLEKPGNSQVI Homology
BLAST of ClCG04G006350.2 vs. NCBI nr
Match: XP_038883685.1 (protein FATTY ACID EXPORT 3, chloroplastic [Benincasa hispida]) HSP 1 Score: 521.2 bits (1341), Expect = 8.8e-144 Identity = 278/308 (90.26%), Postives = 290/308 (94.16%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. NCBI nr
Match: XP_004142682.1 (protein FATTY ACID EXPORT 3, chloroplastic [Cucumis sativus] >KGN54451.1 hypothetical protein Csa_011941 [Cucumis sativus]) HSP 1 Score: 516.5 bits (1329), Expect = 2.2e-142 Identity = 278/323 (86.07%), Postives = 299/323 (92.57%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. NCBI nr
Match: XP_008463262.1 (PREDICTED: protein FATTY ACID EXPORT 3, chloroplastic [Cucumis melo]) HSP 1 Score: 498.4 bits (1282), Expect = 6.1e-137 Identity = 274/323 (84.83%), Postives = 294/323 (91.02%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. NCBI nr
Match: XP_023518355.1 (protein FATTY ACID EXPORT 3, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 466.8 bits (1200), Expect = 2.0e-127 Identity = 247/308 (80.19%), Postives = 273/308 (88.64%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. NCBI nr
Match: XP_022966391.1 (protein FATTY ACID EXPORT 3, chloroplastic [Cucurbita maxima]) HSP 1 Score: 465.7 bits (1197), Expect = 4.4e-127 Identity = 247/308 (80.19%), Postives = 272/308 (88.31%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. ExPASy Swiss-Prot
Match: Q9ZVH7 (Protein FATTY ACID EXPORT 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAX3 PE=2 SV=2) HSP 1 Score: 211.8 bits (538), Expect = 1.5e-53 Identity = 122/252 (48.41%), Postives = 178/252 (70.63%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. ExPASy Swiss-Prot
Match: Q93V66 (Protein FATTY ACID EXPORT 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAX1 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.3e-08 Identity = 53/194 (27.32%), Postives = 99/194 (51.03%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. ExPASy Swiss-Prot
Match: Q9C6T7 (Protein FATTY ACID EXPORT 5 OS=Arabidopsis thaliana OX=3702 GN=FAX5 PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 4.4e-05 Identity = 33/104 (31.73%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. ExPASy Swiss-Prot
Match: Q9LJU6 (Protein FATTY ACID EXPORT 6 OS=Arabidopsis thaliana OX=3702 GN=FAX6 PE=3 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.7e-04 Identity = 34/104 (32.69%), Postives = 59/104 (56.73%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. ExPASy TrEMBL
Match: A0A0A0L2W3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G334130 PE=3 SV=1) HSP 1 Score: 516.5 bits (1329), Expect = 1.0e-142 Identity = 278/323 (86.07%), Postives = 299/323 (92.57%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. ExPASy TrEMBL
Match: A0A1S3CIV0 (protein FATTY ACID EXPORT 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501466 PE=3 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 2.9e-137 Identity = 274/323 (84.83%), Postives = 294/323 (91.02%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. ExPASy TrEMBL
Match: A0A6J1HP56 (protein FATTY ACID EXPORT 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466053 PE=3 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 2.1e-127 Identity = 247/308 (80.19%), Postives = 272/308 (88.31%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. ExPASy TrEMBL
Match: A0A6J1EAV5 (protein FATTY ACID EXPORT 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432338 PE=3 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 4.0e-126 Identity = 247/308 (80.19%), Postives = 272/308 (88.31%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. ExPASy TrEMBL
Match: A0A5D3CEP9 (Protein FATTY ACID EXPORT 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00450 PE=3 SV=1) HSP 1 Score: 448.7 bits (1153), Expect = 2.7e-122 Identity = 240/274 (87.59%), Postives = 256/274 (93.43%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. TAIR 10
Match: AT2G38550.1 (Transmembrane proteins 14C ) HSP 1 Score: 211.8 bits (538), Expect = 1.1e-54 Identity = 122/252 (48.41%), Postives = 178/252 (70.63%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. TAIR 10
Match: AT3G57280.1 (Transmembrane proteins 14C ) HSP 1 Score: 61.2 bits (147), Expect = 2.3e-09 Identity = 53/194 (27.32%), Postives = 99/194 (51.03%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. TAIR 10
Match: AT1G50740.1 (Transmembrane proteins 14C ) HSP 1 Score: 50.8 bits (120), Expect = 3.1e-06 Identity = 33/104 (31.73%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of ClCG04G006350.2 vs. TAIR 10
Match: AT3G20510.1 (Transmembrane proteins 14C ) HSP 1 Score: 48.9 bits (115), Expect = 1.2e-05 Identity = 34/104 (32.69%), Postives = 59/104 (56.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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