ClCG04G003540.2 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG04G003540.2
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPentatricopeptide repeat-containing protein
LocationCG_Chr04: 13638318 .. 13641449 (+)
Sequence length1983
RNA-Seq ExpressionClCG04G003540.2
SyntenyClCG04G003540.2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGTGAGATATGAAGTTGGCTTCCCTAAACAATGAGTTGGATTCATGTCTCAACTCATCTTATCTCCTCACCCCAAACATCCCCTAACTATAAATCGTTGTTAGTTGCTTGATTTTGCCATTTTTTTTGCATTGTTTGCAACTACGAGACATTGTTTTCATGCAATGTAATTTGAGAAGGAAGGGAATTAACTTTAAAAAACAGAGTAGAACGAAAACAAGGTAATTTCACCCCCCAAAAGTCCTATTAGTCTATAAAATTGAAATCCATCCTAAATCTCTTTAACCCTAATTATGTTGTCCTATTTTTGGCAATGCCCCTTCTTTCTCTTGGTCTATTTAACGCTAACTTCCTATTCTTTCTTTTTCTTCATTCTTCACTTACAAGGCAATAGCATCCAGAAATGGCTTTGGAATTAAAATGTAAGATCCTCTTCTTCCCTCTCAAATTCTCACCCCATCATTCAAAAAGGGGGGTGAGGGATCTCTCTCTCTCTCTCTCTCTCTTGAACCCTCAATTTCTCTCACATTCAACTATTCGCCTCCATGCGACCAAAAAGAGTAGCCACTTTTTAGCAGCAGTGAAAGGGGATGCTTCGTAAGGTGGAAAATGGCTGCAAAGCTAAGTGAAGTCTTTTGCTTGCTATGAAAAGTGAGTGAGTTTCATCCTTTCATTTTTGTTCCTGTTTTATTTGTTCAATTAGAATCGTTTGGATTATTGATGGTTTGATTTTGTTTTATTTATCTATGTCACTGTAGAACTGATTATGCTTTGAAAATGAAATGTGTGGATTTTTTGGACAGTTAGTGTTGGGTGGGACACAAACTTCCATTTTTACATAATATTTGTGTTTTCCTGTTTGTTACTCTATTTCTGTTTAACTCGTAGATCTTCACATTATATTTAGATGAAGACTACAGAAAGGTTTTCATACACAAAAAAGTTATAGAGAGGTAATGAGTCAGGTCAAGTATGTTTTCATGGATTTAGGACTCTTGTAAATGCACAAAAGTATTGTAAAAAGGAAGAGATTTTTATGAAATTCTAACTCTATGGTTTATGAAAATTTGCTCTATTTGAAGTGACTGCTCTCATTTGTATGTTGGCAGTAGATTTGATTTATTTATTTGGTTGGTGTCTTGTCATTGTAGGTGATGATGTCGAATGTGTTAAAATCAAGCAAAGTTTTTGACAACTTTCTTGATAGATTAGCTTGGTGCTTAACAAACAGAAAGATTATCTTCTCCAAAATTGTCTCCAAGAAGCACTTCTTTTTTTCTTCTTCCTTTCTTAGTTTCTCTACTTCACCGGCTTCCAAGCTTTCAATTTTTCAACTGCTGGATAATGTAACCACATGCATTGCTTTTCTACAGTCATGTGCTGACCACAAGACTCTCAACAAAGGAAAACAGCTTCACGCCCTGATGATCACCTATGGTTTTTCTCCTTCACCTCCATCCATCACTACCTTAATTAACATGTACTCCAAATGTGGTCGAATGGAGGAGGCCATTTTGGTTTTCCATGATCCGTGTCATGAGCGTAATGTGTTTGCATATAATGCTATAATTTCTGGGTTTGTCGCTAATGGTCTTGCTTCAAAAGGGTTTCAATTTTATAAGCAAATGAGGTTAGAGGGTGTAATGCCTGATAAGTACACTTTTCCATGTGTAGTTAGAACTTGTTGTGAGGTTATGGAGGTGAAGAAGATTCATGGATGTTCGTTTAAAATGGGGTTGGAGTTGGATGTGTTTGTTGGTAGTGCTTTGGTTAATACTTACTTGAAGATTGGCTCAATGGAGGATGCACAAAAAGTGTTTGAAGAACTGTCAATAAGAGATGTTGTACTTTGGAATGCAATGATCAATGGGTATGCTCAGATTGGTTGCCTCGACAAGGCATTAGAGGTTTTCAGAAGAATGCATATAGAAGGGATTGCACCTAGTAGGTTTACAATTACTGCCATTTTATCTATTTTTGCTTTAAGGGGAGACTTAGACAATGGGAAAACGGTTCATGGGATTGTAACAAAAATGGGTTATGACTCAGGAGTTGCAGTTTCTAATGCGTTAATTCATATGTATGGGAAATGCAAACATATTGGAGATGCTTTAATAATTTTTGAGATGATAAATGAGAAGGATATTTTCTCATGGAATTCAATTATATCAGTTCATGAACAAGGTGGTGATCATGATGGTACCTTGAGGCTTTTTGATAAGATGTTAGGTTCTGGGATTCTACCTGATTTGGTAACCATCACAACGGTAGTTCCAGCTTGCTCTCATTTGGCTGCCCTCATGCATGGTAGAGAAATTCATGGATATATGATTGTTAATGGATTGGGAAAAGATGATGAAAACGGAGCAGTAGACGCATTACTAGTAAATAATGCTGTTATGGATATGTATGCAAAATGTGGAAGTATGAACAATGCCCTCAAGATTTTTGATCTAATGAGCAATAAGGACGTTGCATCATGGAATATCATGATTATGGGTTATGGTATGCATGGTTATGGTATGGAGGCATTAGATATGTTTTCCCGAATGTGTGAGGCCGGATTTAAGCCGGATGAAGTTACACTTGTTGGAGTTCTATCAGCATGCAATCATGCGGGTTTTGTATCTCAAGGGCGTTTTTTTTTAGCTGAGATGGAATCTAAATTTGACGTTATTCCAACTATTGAGCATTTTACATGTGTAATTGATATGCTCGGTCGAGCTGGGCATCTGGAGGATGCATATGAGGTTGCTCAGAAAATGCCTATTCAAGCCAATCCTGTTGTTTGGAGGGCTTTACTGGGAGCATGTCGACTTCATGGGAATGCAGAGTTGGCCAAAATTGCAGCACGACGAGTAATGCAACTTGAACCAGAGCATTGTGGGAGTTATGTATTGATGTCCAATGTTTATGGAGTTATAGGTCGATATGAAGAGGTGTTGGAGGTTAGAAAAACAATGAAGGAACAAAATGTCAAGAAGACACCTGGTTGTAGTTGGATTGAACTCAAGGATGGGGTGCATGTTTTTCTTACCGGAGATAGGACACATTCAGAATTGAATGCTTTGACTAATCAACTGTGTGATATTGGATTCATTTTAGATGAAGTCTTGAACTTATATTGA

mRNA sequence

ATGCTTGTGATGATGTCGAATGTGTTAAAATCAAGCAAAGTTTTTGACAACTTTCTTGATAGATTAGCTTGGTGCTTAACAAACAGAAAGATTATCTTCTCCAAAATTGTCTCCAAGAAGCACTTCTTTTTTTCTTCTTCCTTTCTTAGTTTCTCTACTTCACCGGCTTCCAAGCTTTCAATTTTTCAACTGCTGGATAATGTAACCACATGCATTGCTTTTCTACAGTCATGTGCTGACCACAAGACTCTCAACAAAGGAAAACAGCTTCACGCCCTGATGATCACCTATGGTTTTTCTCCTTCACCTCCATCCATCACTACCTTAATTAACATGTACTCCAAATGTGGTCGAATGGAGGAGGCCATTTTGGTTTTCCATGATCCGTGTCATGAGCGTAATGTGTTTGCATATAATGCTATAATTTCTGGGTTTGTCGCTAATGGTCTTGCTTCAAAAGGGTTTCAATTTTATAAGCAAATGAGGTTAGAGGGTGTAATGCCTGATAAGTACACTTTTCCATGTGTAGTTAGAACTTGTTGTGAGGTTATGGAGGTGAAGAAGATTCATGGATGTTCGTTTAAAATGGGGTTGGAGTTGGATGTGTTTGTTGGTAGTGCTTTGGTTAATACTTACTTGAAGATTGGCTCAATGGAGGATGCACAAAAAGTGTTTGAAGAACTGTCAATAAGAGATGTTGTACTTTGGAATGCAATGATCAATGGGTATGCTCAGATTGGTTGCCTCGACAAGGCATTAGAGGTTTTCAGAAGAATGCATATAGAAGGGATTGCACCTAGTAGGTTTACAATTACTGCCATTTTATCTATTTTTGCTTTAAGGGGAGACTTAGACAATGGGAAAACGGTTCATGGGATTGTAACAAAAATGGGTTATGACTCAGGAGTTGCAGTTTCTAATGCGTTAATTCATATGTATGGGAAATGCAAACATATTGGAGATGCTTTAATAATTTTTGAGATGATAAATGAGAAGGATATTTTCTCATGGAATTCAATTATATCAGTTCATGAACAAGGTGGTGATCATGATGGTACCTTGAGGCTTTTTGATAAGATGTTAGGTTCTGGGATTCTACCTGATTTGGTAACCATCACAACGGTAGTTCCAGCTTGCTCTCATTTGGCTGCCCTCATGCATGGTAGAGAAATTCATGGATATATGATTGTTAATGGATTGGGAAAAGATGATGAAAACGGAGCAGTAGACGCATTACTAGTAAATAATGCTGTTATGGATATGTATGCAAAATGTGGAAGTATGAACAATGCCCTCAAGATTTTTGATCTAATGAGCAATAAGGACGTTGCATCATGGAATATCATGATTATGGGTTATGGTATGCATGGTTATGGTATGGAGGCATTAGATATGTTTTCCCGAATGTGTGAGGCCGGATTTAAGCCGGATGAAGTTACACTTGTTGGAGTTCTATCAGCATGCAATCATGCGGGTTTTGTATCTCAAGGGCGTTTTTTTTTAGCTGAGATGGAATCTAAATTTGACGTTATTCCAACTATTGAGCATTTTACATGTGTAATTGATATGCTCGGTCGAGCTGGGCATCTGGAGGATGCATATGAGGTTGCTCAGAAAATGCCTATTCAAGCCAATCCTGTTGTTTGGAGGGCTTTACTGGGAGCATGTCGACTTCATGGGAATGCAGAGTTGGCCAAAATTGCAGCACGACGAGTAATGCAACTTGAACCAGAGCATTGTGGGAGTTATGTATTGATGTCCAATGTTTATGGAGTTATAGGTCGATATGAAGAGGTGTTGGAGGTTAGAAAAACAATGAAGGAACAAAATGTCAAGAAGACACCTGGTTGTAGTTGGATTGAACTCAAGGATGGGGTGCATGTTTTTCTTACCGGAGATAGGACACATTCAGAATTGAATGCTTTGACTAATCAACTGTGTGATATTGGATTCATTTTAGATGAAGTCTTGAACTTATATTGA

Coding sequence (CDS)

ATGCTTGTGATGATGTCGAATGTGTTAAAATCAAGCAAAGTTTTTGACAACTTTCTTGATAGATTAGCTTGGTGCTTAACAAACAGAAAGATTATCTTCTCCAAAATTGTCTCCAAGAAGCACTTCTTTTTTTCTTCTTCCTTTCTTAGTTTCTCTACTTCACCGGCTTCCAAGCTTTCAATTTTTCAACTGCTGGATAATGTAACCACATGCATTGCTTTTCTACAGTCATGTGCTGACCACAAGACTCTCAACAAAGGAAAACAGCTTCACGCCCTGATGATCACCTATGGTTTTTCTCCTTCACCTCCATCCATCACTACCTTAATTAACATGTACTCCAAATGTGGTCGAATGGAGGAGGCCATTTTGGTTTTCCATGATCCGTGTCATGAGCGTAATGTGTTTGCATATAATGCTATAATTTCTGGGTTTGTCGCTAATGGTCTTGCTTCAAAAGGGTTTCAATTTTATAAGCAAATGAGGTTAGAGGGTGTAATGCCTGATAAGTACACTTTTCCATGTGTAGTTAGAACTTGTTGTGAGGTTATGGAGGTGAAGAAGATTCATGGATGTTCGTTTAAAATGGGGTTGGAGTTGGATGTGTTTGTTGGTAGTGCTTTGGTTAATACTTACTTGAAGATTGGCTCAATGGAGGATGCACAAAAAGTGTTTGAAGAACTGTCAATAAGAGATGTTGTACTTTGGAATGCAATGATCAATGGGTATGCTCAGATTGGTTGCCTCGACAAGGCATTAGAGGTTTTCAGAAGAATGCATATAGAAGGGATTGCACCTAGTAGGTTTACAATTACTGCCATTTTATCTATTTTTGCTTTAAGGGGAGACTTAGACAATGGGAAAACGGTTCATGGGATTGTAACAAAAATGGGTTATGACTCAGGAGTTGCAGTTTCTAATGCGTTAATTCATATGTATGGGAAATGCAAACATATTGGAGATGCTTTAATAATTTTTGAGATGATAAATGAGAAGGATATTTTCTCATGGAATTCAATTATATCAGTTCATGAACAAGGTGGTGATCATGATGGTACCTTGAGGCTTTTTGATAAGATGTTAGGTTCTGGGATTCTACCTGATTTGGTAACCATCACAACGGTAGTTCCAGCTTGCTCTCATTTGGCTGCCCTCATGCATGGTAGAGAAATTCATGGATATATGATTGTTAATGGATTGGGAAAAGATGATGAAAACGGAGCAGTAGACGCATTACTAGTAAATAATGCTGTTATGGATATGTATGCAAAATGTGGAAGTATGAACAATGCCCTCAAGATTTTTGATCTAATGAGCAATAAGGACGTTGCATCATGGAATATCATGATTATGGGTTATGGTATGCATGGTTATGGTATGGAGGCATTAGATATGTTTTCCCGAATGTGTGAGGCCGGATTTAAGCCGGATGAAGTTACACTTGTTGGAGTTCTATCAGCATGCAATCATGCGGGTTTTGTATCTCAAGGGCGTTTTTTTTTAGCTGAGATGGAATCTAAATTTGACGTTATTCCAACTATTGAGCATTTTACATGTGTAATTGATATGCTCGGTCGAGCTGGGCATCTGGAGGATGCATATGAGGTTGCTCAGAAAATGCCTATTCAAGCCAATCCTGTTGTTTGGAGGGCTTTACTGGGAGCATGTCGACTTCATGGGAATGCAGAGTTGGCCAAAATTGCAGCACGACGAGTAATGCAACTTGAACCAGAGCATTGTGGGAGTTATGTATTGATGTCCAATGTTTATGGAGTTATAGGTCGATATGAAGAGGTGTTGGAGGTTAGAAAAACAATGAAGGAACAAAATGTCAAGAAGACACCTGGTTGTAGTTGGATTGAACTCAAGGATGGGGTGCATGTTTTTCTTACCGGAGATAGGACACATTCAGAATTGAATGCTTTGACTAATCAACTGTGTGATATTGGATTCATTTTAGATGAAGTCTTGAACTTATATTGA

Protein sequence

MLVMMSNVLKSSKVFDNFLDRLAWCLTNRKIIFSKIVSKKHFFFSSSFLSFSTSPASKLSIFQLLDNVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAILVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCEVMEVKKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMINGYAQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSGVAVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLGSGILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMYAKCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLVGVLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPIQANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY
Homology
BLAST of ClCG04G003540.2 vs. NCBI nr
Match: XP_038881250.1 (pentatricopeptide repeat-containing protein At3g14730-like [Benincasa hispida])

HSP 1 Score: 1230.7 bits (3183), Expect = 0.0e+00
Identity = 602/657 (91.63%), Postives = 627/657 (95.43%), Query Frame = 0

Query: 4   MMSNVLKSSKVFDNFLDRLAWCLTNRKIIFSKIVSKKHFFFSSSFLSFSTSPASKLSIFQ 63
           M+SNVLK SKVFD+ L+ LAW LTNRKIIF+KIVS KH+FF SSFLSFSTS  SKLS+FQ
Sbjct: 1   MISNVLKPSKVFDDVLNSLAWGLTNRKIIFAKIVS-KHYFFPSSFLSFSTSRPSKLSVFQ 60

Query: 64  LLDNVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAI 123
           LLDNVTTCIAFLQSCADHK LNKGKQLH+LMITYGFSPSPPSIT+LINMYSKCG+M EAI
Sbjct: 61  LLDNVTTCIAFLQSCADHKNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMREAI 120

Query: 124 LVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCEV 183
           LVFHDPCHERNVFAYNAIISGFVANGLASKGFQFY+QMRLEGVMPDKYTFPCVVRTCCEV
Sbjct: 121 LVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYEQMRLEGVMPDKYTFPCVVRTCCEV 180

Query: 184 MEVKKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMINGY 243
           MEVKKIHGC FKMGLELDVFVGSALVNTYLKIGSME+AQKVFEE+SIRDVVLWNAMINGY
Sbjct: 181 MEVKKIHGCLFKMGLELDVFVGSALVNTYLKIGSMENAQKVFEEMSIRDVVLWNAMINGY 240

Query: 244 AQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSGV 303
           AQIGCLD+ALEVFRRMHIEGIAPSRFTIT IL IFA RGDLDNG+TVHGIV KMGYDSGV
Sbjct: 241 AQIGCLDEALEVFRRMHIEGIAPSRFTITGILPIFASRGDLDNGQTVHGIVMKMGYDSGV 300

Query: 304 AVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLGS 363
           AVSNALI MYGKCKHI DALIIFEMINEKDIFSWNSIISVHEQ GDHDGTLRLFDKMLGS
Sbjct: 301 AVSNALIDMYGKCKHIRDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGS 360

Query: 364 GILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMYA 423
            ILPDLVTITTV+PACSHLAA MHGREIHGYMIVNGLGKDDENG VD LLVNNAVMDMYA
Sbjct: 361 EILPDLVTITTVLPACSHLAAFMHGREIHGYMIVNGLGKDDENGVVDDLLVNNAVMDMYA 420

Query: 424 KCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLVG 483
           KCGSM NALK+FD MSNKDVASWNIMIMGYGMHGYGM+ALDMFSRMCE GFKPDEVTLVG
Sbjct: 421 KCGSMYNALKVFDQMSNKDVASWNIMIMGYGMHGYGMKALDMFSRMCEVGFKPDEVTLVG 480

Query: 484 VLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPIQ 543
           VLSACNH GFVSQGR  LA+MESKF VIPTIEH+TCVIDMLGRAGHLEDAY++ QKMPIQ
Sbjct: 481 VLSACNHTGFVSQGRLLLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYDITQKMPIQ 540

Query: 544 ANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEVR 603
           ANPVVWRALLGACRLHGNAELA+IAAR+VMQLEPEHCGSYVLMSNVYGVIGR+EEVLEVR
Sbjct: 541 ANPVVWRALLGACRLHGNAELAEIAARQVMQLEPEHCGSYVLMSNVYGVIGRHEEVLEVR 600

Query: 604 KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 661
           KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQ+CDIGFILDEVLNLY
Sbjct: 601 KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQMCDIGFILDEVLNLY 656

BLAST of ClCG04G003540.2 vs. NCBI nr
Match: XP_004150613.2 (pentatricopeptide repeat-containing protein At3g14730 [Cucumis sativus] >XP_031740376.1 pentatricopeptide repeat-containing protein At3g14730 [Cucumis sativus] >XP_031740377.1 pentatricopeptide repeat-containing protein At3g14730 [Cucumis sativus] >XP_031740378.1 pentatricopeptide repeat-containing protein At3g14730 [Cucumis sativus] >XP_031740379.1 pentatricopeptide repeat-containing protein At3g14730 [Cucumis sativus] >XP_031740380.1 pentatricopeptide repeat-containing protein At3g14730 [Cucumis sativus] >KAE8649651.1 hypothetical protein Csa_012609 [Cucumis sativus])

HSP 1 Score: 1226.5 bits (3172), Expect = 0.0e+00
Identity = 595/657 (90.56%), Postives = 625/657 (95.13%), Query Frame = 0

Query: 4   MMSNVLKSSKVFDNFLDRLAWCLTNRKIIFSKIVSKKHFFFSSSFLSFSTSPASKLSIFQ 63
           MMSNVLK SKVFDN LD LAWCLTNRK IFSKIVSKKH+FFSSSFLSFSTSP S LS  Q
Sbjct: 1   MMSNVLKPSKVFDNVLDSLAWCLTNRKFIFSKIVSKKHYFFSSSFLSFSTSPPSMLSAIQ 60

Query: 64  LLDNVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAI 123
           +L+NVT C+AFLQSCADH+ LNKGKQLH+LMITYGFSPSPPSIT+LINMYSKCG+M EAI
Sbjct: 61  MLNNVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAI 120

Query: 124 LVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCEV 183
           LVF+DPCHERNVFAYNAIISGFV+NGLASKGFQFYK+MRLEGVMPDKYTFPCVVRTCCEV
Sbjct: 121 LVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEV 180

Query: 184 MEVKKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMINGY 243
           MEVKKIHGC  KMGLELDVFVGSALVNTYLK GSMEDAQKVF ELSIRDVVLWNAMINGY
Sbjct: 181 MEVKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGY 240

Query: 244 AQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSGV 303
           A+IGCLD+ALEVFRRMH++G+APSRFTIT ILS+FA RGDLDNGKTVHGIV KMGYDSGV
Sbjct: 241 AKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGV 300

Query: 304 AVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLGS 363
           +VSNALI MYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQ GDHDGTLRLFDKMLGS
Sbjct: 301 SVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGS 360

Query: 364 GILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMYA 423
           GILPDLVTITTV+PACSHLAALMHGREIHGYMI+NGLGKDDENGAVD LLV+NAVMDMYA
Sbjct: 361 GILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYA 420

Query: 424 KCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLVG 483
           KCGSMNNALKIFD MS KDVASWNIMIMGYGMHGY +EAL MFS+MCEA FKP+EVTLVG
Sbjct: 421 KCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVG 480

Query: 484 VLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPIQ 543
           VLSACNHAGFVS GR FLA+MES F VIPTIEH+TCVIDMLGRAGHLEDAYE+ QKMPIQ
Sbjct: 481 VLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQ 540

Query: 544 ANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEVR 603
           ANPVVWRALLGACRLHGNAELA+IAAR+V+QLEPEHCGSYVLMSNVYGVIGRYEEVLEVR
Sbjct: 541 ANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVR 600

Query: 604 KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 661
           KTMKEQNVKKTPGCSWIELKDGVHVF TGDRTHSELNALTNQLCDIGFILDEVLNLY
Sbjct: 601 KTMKEQNVKKTPGCSWIELKDGVHVFRTGDRTHSELNALTNQLCDIGFILDEVLNLY 657

BLAST of ClCG04G003540.2 vs. NCBI nr
Match: XP_008455782.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g14730-like [Cucumis melo] >XP_008455783.1 PREDICTED: pentatricopeptide repeat-containing protein At3g14730-like [Cucumis melo] >XP_008455784.1 PREDICTED: pentatricopeptide repeat-containing protein At3g14730-like [Cucumis melo] >XP_016901821.1 PREDICTED: pentatricopeptide repeat-containing protein At3g14730-like [Cucumis melo])

HSP 1 Score: 1222.2 bits (3161), Expect = 0.0e+00
Identity = 595/657 (90.56%), Postives = 620/657 (94.37%), Query Frame = 0

Query: 4   MMSNVLKSSKVFDNFLDRLAWCLTNRKIIFSKIVSKKHFFFSSSFLSFSTSPASKLSIFQ 63
           MM NVLK SKVFDN LD LAWCLTNRK IFSKIVSKKH+FFSSSFLSFSTSP SKLS  Q
Sbjct: 1   MMPNVLKPSKVFDNVLDSLAWCLTNRKFIFSKIVSKKHYFFSSSFLSFSTSPLSKLSAIQ 60

Query: 64  LLDNVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAI 123
           +LDNVT CIAFLQSCADHK LNKGKQ H+LMITYGFS SPPSIT+LINMYSKCG+M EAI
Sbjct: 61  MLDNVTKCIAFLQSCADHKNLNKGKQFHSLMITYGFSLSPPSITSLINMYSKCGQMGEAI 120

Query: 124 LVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCEV 183
           LVF+DPCHERNVFAYNAIISGFVANGLASKGFQFY++MRLEGVMPDKYTFPCVVRTCCEV
Sbjct: 121 LVFYDPCHERNVFAYNAIISGFVANGLASKGFQFYEKMRLEGVMPDKYTFPCVVRTCCEV 180

Query: 184 MEVKKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMINGY 243
            EVKKIHGCS KMGLELDVFVGSALVNTYLK GSMEDAQKVF EL +RDVVLWNAMINGY
Sbjct: 181 KEVKKIHGCSLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELPMRDVVLWNAMINGY 240

Query: 244 AQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSGV 303
           A+IGCLD+ALEVFRRMH+EGIAP RFTIT ILSIFA RGDLDNGKTVHGIV KMGYDSGV
Sbjct: 241 AKIGCLDEALEVFRRMHVEGIAPGRFTITGILSIFASRGDLDNGKTVHGIVVKMGYDSGV 300

Query: 304 AVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLGS 363
           AVSNALI MYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQ GDH GTLRLFDKMLGS
Sbjct: 301 AVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHHGTLRLFDKMLGS 360

Query: 364 GILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMYA 423
           GILPDLVTITTV+PACSHLAALM GREIHGYMI+NG GKDDENGA+D L V+NAVMDMYA
Sbjct: 361 GILPDLVTITTVLPACSHLAALMRGREIHGYMIINGFGKDDENGAIDDLHVSNAVMDMYA 420

Query: 424 KCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLVG 483
           KCGSMNNALKIFD MSNKDVASWNIMIMGYGMHGY +EALDMFSRMCEA FKPDEVTLVG
Sbjct: 421 KCGSMNNALKIFDSMSNKDVASWNIMIMGYGMHGYALEALDMFSRMCEAEFKPDEVTLVG 480

Query: 484 VLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPIQ 543
           VLSACNHAGFVSQGR F A+MES F VIPTIEH+TCVIDMLGRAGHLEDAYEVAQKMPIQ
Sbjct: 481 VLSACNHAGFVSQGRLFFAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEVAQKMPIQ 540

Query: 544 ANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEVR 603
           ANPVVWRALLGACRLHGNAELA++AAR+V+QLEPEHCGSYVLMSNVYGVIGRYEEVLEVR
Sbjct: 541 ANPVVWRALLGACRLHGNAELAEVAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVR 600

Query: 604 KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 661
           KTMKEQNVKKTPGCSWIELKDG+HVF TGDRTHSELNALTNQLCDIGF+LDEVLNLY
Sbjct: 601 KTMKEQNVKKTPGCSWIELKDGMHVFRTGDRTHSELNALTNQLCDIGFLLDEVLNLY 657

BLAST of ClCG04G003540.2 vs. NCBI nr
Match: XP_022152247.1 (pentatricopeptide repeat-containing protein At3g14730-like [Momordica charantia])

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 572/657 (87.06%), Postives = 614/657 (93.46%), Query Frame = 0

Query: 4   MMSNVLKSSKVFDNFLDRLAWCLTNRKIIFSKIVSKKHFFFSSSFLSFSTSPASKLSIFQ 63
           M+SN+LK  KVFD+ +DRLAWCLT +KI FSKIVSKKH+ F SSFLSFSTSP SK S+FQ
Sbjct: 1   MVSNMLKPHKVFDDVVDRLAWCLTTKKINFSKIVSKKHYLF-SSFLSFSTSPPSKCSVFQ 60

Query: 64  LLDNVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAI 123
           LL+NVTT I+FLQSCADHK LN+GKQLH+LMITYGFS SP SIT+LINMYSKCG+MEEAI
Sbjct: 61  LLENVTTSISFLQSCADHKNLNRGKQLHSLMITYGFSHSPSSITSLINMYSKCGQMEEAI 120

Query: 124 LVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCEV 183
           LVFHDPCHERNVFAYNA+ISGFVANGLAS G QFYKQMRLEGVMPDKYTFPCVVR+CCE 
Sbjct: 121 LVFHDPCHERNVFAYNALISGFVANGLASNGLQFYKQMRLEGVMPDKYTFPCVVRSCCEA 180

Query: 184 MEVKKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMINGY 243
           MEVKKIHGC FKMGLELD+FVGSALVNTYLKIG ME+AQKVFEELSIRDVVLWNA+INGY
Sbjct: 181 MEVKKIHGCLFKMGLELDMFVGSALVNTYLKIGLMENAQKVFEELSIRDVVLWNALINGY 240

Query: 244 AQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSGV 303
           AQIGCLD+ALEVFRRM IEGI PSRFT+T ILSIFALRGDL+NG+TVH IVTKMGY+ GV
Sbjct: 241 AQIGCLDEALEVFRRMSIEGILPSRFTVTGILSIFALRGDLNNGRTVHAIVTKMGYNLGV 300

Query: 304 AVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLGS 363
           AV NALI MYGKCKHI DAL+IF+MI+EKDIFSWNSIISVHEQ GDHDGTLRLFDKMLGS
Sbjct: 301 AVLNALIDMYGKCKHIRDALMIFKMIDEKDIFSWNSIISVHEQYGDHDGTLRLFDKMLGS 360

Query: 364 GILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMYA 423
           GILPDLVT+TTV+PACSHLAALMHGREIHGYMIVNG GKD   G VD LLVNNAVMDMYA
Sbjct: 361 GILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGFGKD---GGVDDLLVNNAVMDMYA 420

Query: 424 KCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLVG 483
           KCGSM NAL +FDLMSNKDVASWNI+IMGYGMHGYGMEALD+FS MCEA  KPDEVT VG
Sbjct: 421 KCGSMKNALMVFDLMSNKDVASWNIVIMGYGMHGYGMEALDIFSCMCEARIKPDEVTFVG 480

Query: 484 VLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPIQ 543
           VLSACNHAGFVSQGR FLA+MES+F VIPTIEH+TCVIDMLGRAGHL+DAYE+AQKMPIQ
Sbjct: 481 VLSACNHAGFVSQGRLFLAQMESEFGVIPTIEHYTCVIDMLGRAGHLKDAYELAQKMPIQ 540

Query: 544 ANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEVR 603
           ANP+VWRALLGACRLHGNAELA++AAR+VMQLEPEHCGSYVLMSNVYGV+GRY EVLEVR
Sbjct: 541 ANPIVWRALLGACRLHGNAELAEVAARKVMQLEPEHCGSYVLMSNVYGVVGRYGEVLEVR 600

Query: 604 KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 661
           KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNAL NQLCDIG+ILDEVLNLY
Sbjct: 601 KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALANQLCDIGYILDEVLNLY 653

BLAST of ClCG04G003540.2 vs. NCBI nr
Match: XP_022966216.1 (pentatricopeptide repeat-containing protein At3g14730-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1171.0 bits (3028), Expect = 0.0e+00
Identity = 563/658 (85.56%), Postives = 613/658 (93.16%), Query Frame = 0

Query: 3   VMMSNVLKSSKVFDNFLDRLAWCLTNRKIIFSKIVSKKHFFFSSSFLSFSTSPASKLSIF 62
           V M N+LK SK FDN +DRLAWC+TN+K I +KIVSKKH+F SSSFLS STSP SK S F
Sbjct: 5   VTMLNMLKPSKFFDNVVDRLAWCITNKK-ISTKIVSKKHYFVSSSFLSLSTSPPSKPSDF 64

Query: 63  QLLDNVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEA 122
           +LL+NVTTCIAFLQSCA+ K LNKGKQLH++MITYGFS SP SIT+LINMYSKCGRMEEA
Sbjct: 65  RLLNNVTTCIAFLQSCAESKNLNKGKQLHSVMITYGFSHSPSSITSLINMYSKCGRMEEA 124

Query: 123 ILVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCE 182
           +LVFHDPC+E NVFAYNAIISGFVANGLAS GFQFYKQMRLEGVMPDKYTFPCVVR+CCE
Sbjct: 125 VLVFHDPCYEPNVFAYNAIISGFVANGLASIGFQFYKQMRLEGVMPDKYTFPCVVRSCCE 184

Query: 183 VMEVKKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMING 242
           VMEVKKIHGC FKMGLELD+FVGSALVNTYLK+GSMEDAQ+VFEEL IRDVVLWNAMING
Sbjct: 185 VMEVKKIHGCLFKMGLELDLFVGSALVNTYLKLGSMEDAQEVFEELPIRDVVLWNAMING 244

Query: 243 YAQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSG 302
           YAQIGCLD+ALE+F+RMHIEG++PSRFTIT ILSIFAL+G LDNG+TVHGIV KMGYDSG
Sbjct: 245 YAQIGCLDEALEIFKRMHIEGVSPSRFTITGILSIFALKGHLDNGRTVHGIVMKMGYDSG 304

Query: 303 VAVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLG 362
           VAVSNALI MYGKCKHIGDAL++FE +NEKDIFSWNSIISVHEQ GDHDG LRLFDKMLG
Sbjct: 305 VAVSNALIDMYGKCKHIGDALMVFETMNEKDIFSWNSIISVHEQCGDHDGALRLFDKMLG 364

Query: 363 SGILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMY 422
           SG LPDLVT+TT++PACSHLAALMHGREIHGYMIVNGLG+D +NG +D LLVNNAVMDMY
Sbjct: 365 SGFLPDLVTVTTILPACSHLAALMHGREIHGYMIVNGLGRDGDNGVIDDLLVNNAVMDMY 424

Query: 423 AKCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLV 482
           AKCGSMNNA K+F+ M+NKDVASWNIMIMGYGMHGYGM+ALDMFS MCEA  KPDEVT V
Sbjct: 425 AKCGSMNNAQKVFNSMTNKDVASWNIMIMGYGMHGYGMDALDMFSHMCEAKIKPDEVTFV 484

Query: 483 GVLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPI 542
           GVLSACNHAGFV QGR FLA+ME  F VIPTIEH+TCVIDMLGRAGHLEDAY++AQ MPI
Sbjct: 485 GVLSACNHAGFVCQGRMFLAQMEHDFGVIPTIEHYTCVIDMLGRAGHLEDAYDLAQTMPI 544

Query: 543 QANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEV 602
           QANPVVWRALLGACRLHGNAELA+IAA++VMQL+PEHCGSYVLMSNVYGV+GRYEEVLEV
Sbjct: 545 QANPVVWRALLGACRLHGNAELAEIAAQKVMQLDPEHCGSYVLMSNVYGVVGRYEEVLEV 604

Query: 603 RKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 661
           R TMKEQ+V+KTPGCSWIELKDGVHVFLTGDRTH ELNALT+QLCDIGFILDEVLNLY
Sbjct: 605 RNTMKEQHVRKTPGCSWIELKDGVHVFLTGDRTHLELNALTSQLCDIGFILDEVLNLY 661

BLAST of ClCG04G003540.2 vs. ExPASy Swiss-Prot
Match: Q9LUC2 (Pentatricopeptide repeat-containing protein At3g14730 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E31 PE=2 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 3.6e-192
Identity = 323/584 (55.31%), Postives = 426/584 (72.95%), Query Frame = 0

Query: 67  NVTTCIAFLQSCADHKTLNKGKQLHALMITYGF-SPSPPSITTLINMYSKCGRMEEAILV 126
           NV TCIA LQ CA  K    G+Q+H  M+  GF   SP + T+L+NMY+KCG M  A+LV
Sbjct: 59  NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118

Query: 127 FHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVR--TCCEV 186
           F     ER+VF YNA+ISGFV NG      + Y++MR  G++PDKYTFP +++     E+
Sbjct: 119 FGG--SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMEL 178

Query: 187 MEVKKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIR-DVVLWNAMING 246
            +VKK+HG +FK+G + D +VGS LV +Y K  S+EDAQKVF+EL  R D VLWNA++NG
Sbjct: 179 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 238

Query: 247 YAQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSG 306
           Y+QI   + AL VF +M  EG+  SR TIT++LS F + GD+DNG+++HG+  K G  S 
Sbjct: 239 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD 298

Query: 307 VAVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLG 366
           + VSNALI MYGK K + +A  IFE ++E+D+F+WNS++ VH+  GDHDGTL LF++ML 
Sbjct: 299 IVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLC 358

Query: 367 SGILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMY 426
           SGI PD+VT+TTV+P C  LA+L  GREIHGYMIV+GL     N       ++N++MDMY
Sbjct: 359 SGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGL----LNRKSSNEFIHNSLMDMY 418

Query: 427 AKCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLV 486
            KCG + +A  +FD M  KD ASWNIMI GYG+   G  ALDMFS MC AG KPDE+T V
Sbjct: 419 VKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFV 478

Query: 487 GVLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPI 546
           G+L AC+H+GF+++GR FLA+ME+ ++++PT +H+ CVIDMLGRA  LE+AYE+A   PI
Sbjct: 479 GLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPI 538

Query: 547 QANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEV 606
             NPVVWR++L +CRLHGN +LA +A +R+ +LEPEHCG YVLMSNVY   G+YEEVL+V
Sbjct: 539 CDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDV 598

Query: 607 RKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQL 647
           R  M++QNVKKTPGCSWI LK+GVH F TG++TH E  ++ + L
Sbjct: 599 RDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWL 636

BLAST of ClCG04G003540.2 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 9.4e-116
Identity = 218/579 (37.65%), Postives = 348/579 (60.10%), Query Frame = 0

Query: 65  LDNVT-TCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAI 124
           +D+ T +C++  +S +  ++++ G+QLH  ++  GF        +L+  Y K  R++ A 
Sbjct: 193 MDSYTFSCVS--KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSAR 252

Query: 125 LVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCEV 184
            VF D   ER+V ++N+II+G+V+NGLA KG   + QM + G+  D  T   V   C + 
Sbjct: 253 KVF-DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADS 312

Query: 185 MEV---KKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMI 244
             +   + +H    K     +    + L++ Y K G ++ A+ VF E+S R VV + +MI
Sbjct: 313 RLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMI 372

Query: 245 NGYAQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYD 304
            GYA+ G   +A+++F  M  EGI+P  +T+TA+L+  A    LD GK VH  + +    
Sbjct: 373 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 432

Query: 305 SGVAVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKM 364
             + VSNAL+ MY KC  + +A ++F  +  KDI SWN+II  + +    +  L LF+ +
Sbjct: 433 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL 492

Query: 365 L-GSGILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVM 424
           L      PD  T+  V+PAC+ L+A   GREIHGY++ NG   D          V N+++
Sbjct: 493 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH--------VANSLV 552

Query: 425 DMYAKCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEV 484
           DMYAKCG++  A  +FD +++KD+ SW +MI GYGMHG+G EA+ +F++M +AG + DE+
Sbjct: 553 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 612

Query: 485 TLVGVLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQK 544
           + V +L AC+H+G V +G  F   M  +  + PT+EH+ C++DML R G L  AY   + 
Sbjct: 613 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 672

Query: 545 MPIQANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEV 604
           MPI  +  +W ALL  CR+H + +LA+  A +V +LEPE+ G YVLM+N+Y    ++E+V
Sbjct: 673 MPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQV 732

Query: 605 LEVRKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSE 639
             +RK + ++ ++K PGCSWIE+K  V++F+ GD ++ E
Sbjct: 733 KRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPE 760

BLAST of ClCG04G003540.2 vs. ExPASy Swiss-Prot
Match: Q9M9E2 (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 6.1e-115
Identity = 210/584 (35.96%), Postives = 336/584 (57.53%), Query Frame = 0

Query: 67  NVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAILVF 126
           +V T    L++C     L +GK++H  ++ YG+      +  LI MY KCG ++ A L+F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254

Query: 127 HDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCEVMEV 186
            D    R++ ++NA+ISG+  NG+  +G + +  MR   V PD  T   V+ + CE++  
Sbjct: 255 -DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI-SACELLGD 314

Query: 187 KK----IHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMING 246
           ++    IH      G  +D+ V ++L   YL  GS  +A+K+F  +  +D+V W  MI+G
Sbjct: 315 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 374

Query: 247 YAQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSG 306
           Y      DKA++ +R M  + + P   T+ A+LS  A  GDLD G  +H +  K    S 
Sbjct: 375 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 434

Query: 307 VAVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLG 366
           V V+N LI+MY KCK I  AL IF  I  K++ SW SII+           L +F + + 
Sbjct: 435 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMK 494

Query: 367 SGILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMY 426
             + P+ +T+T  + AC+ + ALM G+EIH +++  G+G DD         + NA++DMY
Sbjct: 495 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDD--------FLPNALLDMY 554

Query: 427 AKCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLV 486
            +CG MN A   F+    KDV SWNI++ GY   G G   +++F RM ++  +PDE+T +
Sbjct: 555 VRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFI 614

Query: 487 GVLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPI 546
            +L  C+ +  V QG  + ++ME  + V P ++H+ CV+D+LGRAG L++A++  QKMP+
Sbjct: 615 SLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPV 674

Query: 547 QANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEV 606
             +P VW ALL ACR+H   +L +++A+ + +L+ +  G Y+L+ N+Y   G++ EV +V
Sbjct: 675 TPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKV 734

Query: 607 RKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQL 647
           R+ MKE  +    GCSW+E+K  VH FL+ D+ H +   +   L
Sbjct: 735 RRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVL 765

BLAST of ClCG04G003540.2 vs. ExPASy Swiss-Prot
Match: Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.3e-112
Identity = 217/615 (35.28%), Postives = 346/615 (56.26%), Query Frame = 0

Query: 57  SKLSIFQLLDNVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKC 116
           S + + Q+  N  T    L  CA    ++ G QLH L++  G         +L++MYSKC
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287

Query: 117 GRMEEAILVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCV 176
           GR ++A  +F       +   +N +ISG+V +GL  +   F+ +M   GV+PD  TF  +
Sbjct: 288 GRFDDASKLFR-MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 347

Query: 177 VRTCCEVMEV---KKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDV 236
           + +  +   +   K+IH    +  + LD+F+ SAL++ Y K   +  AQ +F + +  DV
Sbjct: 348 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 407

Query: 237 VLWNAMINGYAQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGI 296
           V++ AMI+GY   G    +LE+FR +    I+P+  T+ +IL +  +   L  G+ +HG 
Sbjct: 408 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 467

Query: 297 VTKMGYDSGVAVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGT 356
           + K G+D+   +  A+I MY KC  +  A  IFE ++++DI SWNS+I+   Q  +    
Sbjct: 468 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 527

Query: 357 LRLFDKMLGSGILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALL 416
           + +F +M  SGI  D V+I+  + AC++L +   G+ IHG+MI + L  D        + 
Sbjct: 528 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD--------VY 587

Query: 417 VNNAVMDMYAKCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCE-A 476
             + ++DMYAKCG++  A+ +F  M  K++ SWN +I   G HG   ++L +F  M E +
Sbjct: 588 SESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS 647

Query: 477 GFKPDEVTLVGVLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLED 536
           G +PD++T + ++S+C H G V +G  F   M   + + P  EH+ CV+D+ GRAG L +
Sbjct: 648 GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTE 707

Query: 537 AYEVAQKMPIQANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGV 596
           AYE  + MP   +  VW  LLGACRLH N ELA++A+ ++M L+P + G YVL+SN +  
Sbjct: 708 AYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHAN 767

Query: 597 IGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSE-------LNALTNQ 656
              +E V +VR  MKE+ V+K PG SWIE+    H+F++GD  H E       LN+L  +
Sbjct: 768 AREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGE 827

Query: 657 LCDIGFILDEVLNLY 661
           L   G+I    L L+
Sbjct: 828 LRLEGYIPQPYLPLH 833

BLAST of ClCG04G003540.2 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 8.2e-112
Identity = 209/615 (33.98%), Postives = 344/615 (55.93%), Query Frame = 0

Query: 88  KQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAILVFHDPCHERNVFAYNAI------ 147
           + +HA +I  GFS        LI+ YSKCG +E+   VF D   +RN++ +N++      
Sbjct: 40  RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVF-DKMPQRNIYTWNSVVTGLTK 99

Query: 148 -------------------------ISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCV 207
                                    +SGF  +    +   ++  M  EG + ++Y+F  V
Sbjct: 100 LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASV 159

Query: 208 VRTCCEVMEVKK---IHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDV 267
           +  C  + ++ K   +H    K     DV++GSALV+ Y K G++ DAQ+VF+E+  R+V
Sbjct: 160 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 219

Query: 268 VLWNAMINGYAQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGI 327
           V WN++I  + Q G   +AL+VF+ M    + P   T+ +++S  A    +  G+ VHG 
Sbjct: 220 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 279

Query: 328 VTKMG-YDSGVAVSNALIHMYGKCKHIGDALIIFE------------MIN---------- 387
           V K     + + +SNA + MY KC  I +A  IF+            MI+          
Sbjct: 280 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 339

Query: 388 ---------EKDIFSWNSIISVHEQGGDHDGTLRLFDKMLGSGILPDLVTITTVVPACSH 447
                    E+++ SWN++I+ + Q G+++  L LF  +    + P   +   ++ AC+ 
Sbjct: 340 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACAD 399

Query: 448 LAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMYAKCGSMNNALKIFDLMSNK 507
           LA L  G + H +++ +G     ++G  D + V N+++DMY KCG +     +F  M  +
Sbjct: 400 LAELHLGMQAHVHVLKHGF--KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 459

Query: 508 DVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLVGVLSACNHAGFVSQGRFFL 567
           D  SWN MI+G+  +GYG EAL++F  M E+G KPD +T++GVLSAC HAGFV +GR + 
Sbjct: 460 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 519

Query: 568 AEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPIQANPVVWRALLGACRLHGN 627
           + M   F V P  +H+TC++D+LGRAG LE+A  + ++MP+Q + V+W +LL AC++H N
Sbjct: 520 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 579

Query: 628 AELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIE 637
             L K  A +++++EP + G YVL+SN+Y  +G++E+V+ VRK+M+++ V K PGCSWI+
Sbjct: 580 ITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIK 639

BLAST of ClCG04G003540.2 vs. ExPASy TrEMBL
Match: A0A1S4E0R7 (pentatricopeptide repeat-containing protein At3g14730-like OS=Cucumis melo OX=3656 GN=LOC103495881 PE=4 SV=1)

HSP 1 Score: 1222.2 bits (3161), Expect = 0.0e+00
Identity = 595/657 (90.56%), Postives = 620/657 (94.37%), Query Frame = 0

Query: 4   MMSNVLKSSKVFDNFLDRLAWCLTNRKIIFSKIVSKKHFFFSSSFLSFSTSPASKLSIFQ 63
           MM NVLK SKVFDN LD LAWCLTNRK IFSKIVSKKH+FFSSSFLSFSTSP SKLS  Q
Sbjct: 1   MMPNVLKPSKVFDNVLDSLAWCLTNRKFIFSKIVSKKHYFFSSSFLSFSTSPLSKLSAIQ 60

Query: 64  LLDNVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAI 123
           +LDNVT CIAFLQSCADHK LNKGKQ H+LMITYGFS SPPSIT+LINMYSKCG+M EAI
Sbjct: 61  MLDNVTKCIAFLQSCADHKNLNKGKQFHSLMITYGFSLSPPSITSLINMYSKCGQMGEAI 120

Query: 124 LVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCEV 183
           LVF+DPCHERNVFAYNAIISGFVANGLASKGFQFY++MRLEGVMPDKYTFPCVVRTCCEV
Sbjct: 121 LVFYDPCHERNVFAYNAIISGFVANGLASKGFQFYEKMRLEGVMPDKYTFPCVVRTCCEV 180

Query: 184 MEVKKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMINGY 243
            EVKKIHGCS KMGLELDVFVGSALVNTYLK GSMEDAQKVF EL +RDVVLWNAMINGY
Sbjct: 181 KEVKKIHGCSLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELPMRDVVLWNAMINGY 240

Query: 244 AQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSGV 303
           A+IGCLD+ALEVFRRMH+EGIAP RFTIT ILSIFA RGDLDNGKTVHGIV KMGYDSGV
Sbjct: 241 AKIGCLDEALEVFRRMHVEGIAPGRFTITGILSIFASRGDLDNGKTVHGIVVKMGYDSGV 300

Query: 304 AVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLGS 363
           AVSNALI MYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQ GDH GTLRLFDKMLGS
Sbjct: 301 AVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHHGTLRLFDKMLGS 360

Query: 364 GILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMYA 423
           GILPDLVTITTV+PACSHLAALM GREIHGYMI+NG GKDDENGA+D L V+NAVMDMYA
Sbjct: 361 GILPDLVTITTVLPACSHLAALMRGREIHGYMIINGFGKDDENGAIDDLHVSNAVMDMYA 420

Query: 424 KCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLVG 483
           KCGSMNNALKIFD MSNKDVASWNIMIMGYGMHGY +EALDMFSRMCEA FKPDEVTLVG
Sbjct: 421 KCGSMNNALKIFDSMSNKDVASWNIMIMGYGMHGYALEALDMFSRMCEAEFKPDEVTLVG 480

Query: 484 VLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPIQ 543
           VLSACNHAGFVSQGR F A+MES F VIPTIEH+TCVIDMLGRAGHLEDAYEVAQKMPIQ
Sbjct: 481 VLSACNHAGFVSQGRLFFAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEVAQKMPIQ 540

Query: 544 ANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEVR 603
           ANPVVWRALLGACRLHGNAELA++AAR+V+QLEPEHCGSYVLMSNVYGVIGRYEEVLEVR
Sbjct: 541 ANPVVWRALLGACRLHGNAELAEVAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVR 600

Query: 604 KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 661
           KTMKEQNVKKTPGCSWIELKDG+HVF TGDRTHSELNALTNQLCDIGF+LDEVLNLY
Sbjct: 601 KTMKEQNVKKTPGCSWIELKDGMHVFRTGDRTHSELNALTNQLCDIGFLLDEVLNLY 657

BLAST of ClCG04G003540.2 vs. ExPASy TrEMBL
Match: A0A6J1DFN8 (pentatricopeptide repeat-containing protein At3g14730-like OS=Momordica charantia OX=3673 GN=LOC111020018 PE=4 SV=1)

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 572/657 (87.06%), Postives = 614/657 (93.46%), Query Frame = 0

Query: 4   MMSNVLKSSKVFDNFLDRLAWCLTNRKIIFSKIVSKKHFFFSSSFLSFSTSPASKLSIFQ 63
           M+SN+LK  KVFD+ +DRLAWCLT +KI FSKIVSKKH+ F SSFLSFSTSP SK S+FQ
Sbjct: 1   MVSNMLKPHKVFDDVVDRLAWCLTTKKINFSKIVSKKHYLF-SSFLSFSTSPPSKCSVFQ 60

Query: 64  LLDNVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAI 123
           LL+NVTT I+FLQSCADHK LN+GKQLH+LMITYGFS SP SIT+LINMYSKCG+MEEAI
Sbjct: 61  LLENVTTSISFLQSCADHKNLNRGKQLHSLMITYGFSHSPSSITSLINMYSKCGQMEEAI 120

Query: 124 LVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCEV 183
           LVFHDPCHERNVFAYNA+ISGFVANGLAS G QFYKQMRLEGVMPDKYTFPCVVR+CCE 
Sbjct: 121 LVFHDPCHERNVFAYNALISGFVANGLASNGLQFYKQMRLEGVMPDKYTFPCVVRSCCEA 180

Query: 184 MEVKKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMINGY 243
           MEVKKIHGC FKMGLELD+FVGSALVNTYLKIG ME+AQKVFEELSIRDVVLWNA+INGY
Sbjct: 181 MEVKKIHGCLFKMGLELDMFVGSALVNTYLKIGLMENAQKVFEELSIRDVVLWNALINGY 240

Query: 244 AQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSGV 303
           AQIGCLD+ALEVFRRM IEGI PSRFT+T ILSIFALRGDL+NG+TVH IVTKMGY+ GV
Sbjct: 241 AQIGCLDEALEVFRRMSIEGILPSRFTVTGILSIFALRGDLNNGRTVHAIVTKMGYNLGV 300

Query: 304 AVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLGS 363
           AV NALI MYGKCKHI DAL+IF+MI+EKDIFSWNSIISVHEQ GDHDGTLRLFDKMLGS
Sbjct: 301 AVLNALIDMYGKCKHIRDALMIFKMIDEKDIFSWNSIISVHEQYGDHDGTLRLFDKMLGS 360

Query: 364 GILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMYA 423
           GILPDLVT+TTV+PACSHLAALMHGREIHGYMIVNG GKD   G VD LLVNNAVMDMYA
Sbjct: 361 GILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGFGKD---GGVDDLLVNNAVMDMYA 420

Query: 424 KCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLVG 483
           KCGSM NAL +FDLMSNKDVASWNI+IMGYGMHGYGMEALD+FS MCEA  KPDEVT VG
Sbjct: 421 KCGSMKNALMVFDLMSNKDVASWNIVIMGYGMHGYGMEALDIFSCMCEARIKPDEVTFVG 480

Query: 484 VLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPIQ 543
           VLSACNHAGFVSQGR FLA+MES+F VIPTIEH+TCVIDMLGRAGHL+DAYE+AQKMPIQ
Sbjct: 481 VLSACNHAGFVSQGRLFLAQMESEFGVIPTIEHYTCVIDMLGRAGHLKDAYELAQKMPIQ 540

Query: 544 ANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEVR 603
           ANP+VWRALLGACRLHGNAELA++AAR+VMQLEPEHCGSYVLMSNVYGV+GRY EVLEVR
Sbjct: 541 ANPIVWRALLGACRLHGNAELAEVAARKVMQLEPEHCGSYVLMSNVYGVVGRYGEVLEVR 600

Query: 604 KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 661
           KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNAL NQLCDIG+ILDEVLNLY
Sbjct: 601 KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALANQLCDIGYILDEVLNLY 653

BLAST of ClCG04G003540.2 vs. ExPASy TrEMBL
Match: A0A6J1HNR1 (pentatricopeptide repeat-containing protein At3g14730-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465952 PE=4 SV=1)

HSP 1 Score: 1171.0 bits (3028), Expect = 0.0e+00
Identity = 563/658 (85.56%), Postives = 613/658 (93.16%), Query Frame = 0

Query: 3   VMMSNVLKSSKVFDNFLDRLAWCLTNRKIIFSKIVSKKHFFFSSSFLSFSTSPASKLSIF 62
           V M N+LK SK FDN +DRLAWC+TN+K I +KIVSKKH+F SSSFLS STSP SK S F
Sbjct: 5   VTMLNMLKPSKFFDNVVDRLAWCITNKK-ISTKIVSKKHYFVSSSFLSLSTSPPSKPSDF 64

Query: 63  QLLDNVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEA 122
           +LL+NVTTCIAFLQSCA+ K LNKGKQLH++MITYGFS SP SIT+LINMYSKCGRMEEA
Sbjct: 65  RLLNNVTTCIAFLQSCAESKNLNKGKQLHSVMITYGFSHSPSSITSLINMYSKCGRMEEA 124

Query: 123 ILVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCE 182
           +LVFHDPC+E NVFAYNAIISGFVANGLAS GFQFYKQMRLEGVMPDKYTFPCVVR+CCE
Sbjct: 125 VLVFHDPCYEPNVFAYNAIISGFVANGLASIGFQFYKQMRLEGVMPDKYTFPCVVRSCCE 184

Query: 183 VMEVKKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMING 242
           VMEVKKIHGC FKMGLELD+FVGSALVNTYLK+GSMEDAQ+VFEEL IRDVVLWNAMING
Sbjct: 185 VMEVKKIHGCLFKMGLELDLFVGSALVNTYLKLGSMEDAQEVFEELPIRDVVLWNAMING 244

Query: 243 YAQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSG 302
           YAQIGCLD+ALE+F+RMHIEG++PSRFTIT ILSIFAL+G LDNG+TVHGIV KMGYDSG
Sbjct: 245 YAQIGCLDEALEIFKRMHIEGVSPSRFTITGILSIFALKGHLDNGRTVHGIVMKMGYDSG 304

Query: 303 VAVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLG 362
           VAVSNALI MYGKCKHIGDAL++FE +NEKDIFSWNSIISVHEQ GDHDG LRLFDKMLG
Sbjct: 305 VAVSNALIDMYGKCKHIGDALMVFETMNEKDIFSWNSIISVHEQCGDHDGALRLFDKMLG 364

Query: 363 SGILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMY 422
           SG LPDLVT+TT++PACSHLAALMHGREIHGYMIVNGLG+D +NG +D LLVNNAVMDMY
Sbjct: 365 SGFLPDLVTVTTILPACSHLAALMHGREIHGYMIVNGLGRDGDNGVIDDLLVNNAVMDMY 424

Query: 423 AKCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLV 482
           AKCGSMNNA K+F+ M+NKDVASWNIMIMGYGMHGYGM+ALDMFS MCEA  KPDEVT V
Sbjct: 425 AKCGSMNNAQKVFNSMTNKDVASWNIMIMGYGMHGYGMDALDMFSHMCEAKIKPDEVTFV 484

Query: 483 GVLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPI 542
           GVLSACNHAGFV QGR FLA+ME  F VIPTIEH+TCVIDMLGRAGHLEDAY++AQ MPI
Sbjct: 485 GVLSACNHAGFVCQGRMFLAQMEHDFGVIPTIEHYTCVIDMLGRAGHLEDAYDLAQTMPI 544

Query: 543 QANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEV 602
           QANPVVWRALLGACRLHGNAELA+IAA++VMQL+PEHCGSYVLMSNVYGV+GRYEEVLEV
Sbjct: 545 QANPVVWRALLGACRLHGNAELAEIAAQKVMQLDPEHCGSYVLMSNVYGVVGRYEEVLEV 604

Query: 603 RKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 661
           R TMKEQ+V+KTPGCSWIELKDGVHVFLTGDRTH ELNALT+QLCDIGFILDEVLNLY
Sbjct: 605 RNTMKEQHVRKTPGCSWIELKDGVHVFLTGDRTHLELNALTSQLCDIGFILDEVLNLY 661

BLAST of ClCG04G003540.2 vs. ExPASy TrEMBL
Match: A0A6J1HME0 (pentatricopeptide repeat-containing protein At3g14730-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465952 PE=4 SV=1)

HSP 1 Score: 1170.2 bits (3026), Expect = 0.0e+00
Identity = 562/656 (85.67%), Postives = 612/656 (93.29%), Query Frame = 0

Query: 5   MSNVLKSSKVFDNFLDRLAWCLTNRKIIFSKIVSKKHFFFSSSFLSFSTSPASKLSIFQL 64
           M N+LK SK FDN +DRLAWC+TN+K I +KIVSKKH+F SSSFLS STSP SK S F+L
Sbjct: 1   MLNMLKPSKFFDNVVDRLAWCITNKK-ISTKIVSKKHYFVSSSFLSLSTSPPSKPSDFRL 60

Query: 65  LDNVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAIL 124
           L+NVTTCIAFLQSCA+ K LNKGKQLH++MITYGFS SP SIT+LINMYSKCGRMEEA+L
Sbjct: 61  LNNVTTCIAFLQSCAESKNLNKGKQLHSVMITYGFSHSPSSITSLINMYSKCGRMEEAVL 120

Query: 125 VFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCEVM 184
           VFHDPC+E NVFAYNAIISGFVANGLAS GFQFYKQMRLEGVMPDKYTFPCVVR+CCEVM
Sbjct: 121 VFHDPCYEPNVFAYNAIISGFVANGLASIGFQFYKQMRLEGVMPDKYTFPCVVRSCCEVM 180

Query: 185 EVKKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMINGYA 244
           EVKKIHGC FKMGLELD+FVGSALVNTYLK+GSMEDAQ+VFEEL IRDVVLWNAMINGYA
Sbjct: 181 EVKKIHGCLFKMGLELDLFVGSALVNTYLKLGSMEDAQEVFEELPIRDVVLWNAMINGYA 240

Query: 245 QIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSGVA 304
           QIGCLD+ALE+F+RMHIEG++PSRFTIT ILSIFAL+G LDNG+TVHGIV KMGYDSGVA
Sbjct: 241 QIGCLDEALEIFKRMHIEGVSPSRFTITGILSIFALKGHLDNGRTVHGIVMKMGYDSGVA 300

Query: 305 VSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLGSG 364
           VSNALI MYGKCKHIGDAL++FE +NEKDIFSWNSIISVHEQ GDHDG LRLFDKMLGSG
Sbjct: 301 VSNALIDMYGKCKHIGDALMVFETMNEKDIFSWNSIISVHEQCGDHDGALRLFDKMLGSG 360

Query: 365 ILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMYAK 424
            LPDLVT+TT++PACSHLAALMHGREIHGYMIVNGLG+D +NG +D LLVNNAVMDMYAK
Sbjct: 361 FLPDLVTVTTILPACSHLAALMHGREIHGYMIVNGLGRDGDNGVIDDLLVNNAVMDMYAK 420

Query: 425 CGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLVGV 484
           CGSMNNA K+F+ M+NKDVASWNIMIMGYGMHGYGM+ALDMFS MCEA  KPDEVT VGV
Sbjct: 421 CGSMNNAQKVFNSMTNKDVASWNIMIMGYGMHGYGMDALDMFSHMCEAKIKPDEVTFVGV 480

Query: 485 LSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPIQA 544
           LSACNHAGFV QGR FLA+ME  F VIPTIEH+TCVIDMLGRAGHLEDAY++AQ MPIQA
Sbjct: 481 LSACNHAGFVCQGRMFLAQMEHDFGVIPTIEHYTCVIDMLGRAGHLEDAYDLAQTMPIQA 540

Query: 545 NPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRK 604
           NPVVWRALLGACRLHGNAELA+IAA++VMQL+PEHCGSYVLMSNVYGV+GRYEEVLEVR 
Sbjct: 541 NPVVWRALLGACRLHGNAELAEIAAQKVMQLDPEHCGSYVLMSNVYGVVGRYEEVLEVRN 600

Query: 605 TMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 661
           TMKEQ+V+KTPGCSWIELKDGVHVFLTGDRTH ELNALT+QLCDIGFILDEVLNLY
Sbjct: 601 TMKEQHVRKTPGCSWIELKDGVHVFLTGDRTHLELNALTSQLCDIGFILDEVLNLY 655

BLAST of ClCG04G003540.2 vs. ExPASy TrEMBL
Match: A0A6J1EGD0 (pentatricopeptide repeat-containing protein At3g14730 OS=Cucurbita moschata OX=3662 GN=LOC111432309 PE=4 SV=1)

HSP 1 Score: 1165.2 bits (3013), Expect = 0.0e+00
Identity = 561/656 (85.52%), Postives = 610/656 (92.99%), Query Frame = 0

Query: 5   MSNVLKSSKVFDNFLDRLAWCLTNRKIIFSKIVSKKHFFFSSSFLSFSTSPASKLSIFQL 64
           M N+LK SK FDN +DRLAWC+TN+K I +KIVSKKH+F SSSFLS STS  SK S F+L
Sbjct: 1   MLNMLKPSKFFDNVVDRLAWCITNKK-ISTKIVSKKHYFVSSSFLSLSTSLPSKPSDFRL 60

Query: 65  LDNVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAIL 124
           LDNVTTCIAFLQSCA+ K LNKGKQLH++MITYGFS SP SIT+LINMYSKCGRMEEA+L
Sbjct: 61  LDNVTTCIAFLQSCAESKNLNKGKQLHSVMITYGFSHSPSSITSLINMYSKCGRMEEAVL 120

Query: 125 VFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCEVM 184
           VFHDPC+E NVFAYNAIISGFVANGLAS GFQFYKQMRLEGVMPDKYTFPCVVR+CCEVM
Sbjct: 121 VFHDPCYEPNVFAYNAIISGFVANGLASIGFQFYKQMRLEGVMPDKYTFPCVVRSCCEVM 180

Query: 185 EVKKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMINGYA 244
           EVKKIHGC FKMGLELD+FVGSALVNTYLK+GSMEDAQ+VFEEL IRDVVLWNAMINGYA
Sbjct: 181 EVKKIHGCLFKMGLELDLFVGSALVNTYLKLGSMEDAQEVFEELPIRDVVLWNAMINGYA 240

Query: 245 QIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSGVA 304
           QIGCLD+ALE+FRRMHIEG++PSRFTIT ILSIFAL+G LDNG+TVHGIV KMGYDSGVA
Sbjct: 241 QIGCLDEALEIFRRMHIEGVSPSRFTITGILSIFALKGHLDNGRTVHGIVMKMGYDSGVA 300

Query: 305 VSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLGSG 364
           VSNALI MYGKCKHIGDAL++FE +NEKDIFSWNSIISVHEQ GDHDG LRLFDKMLGSG
Sbjct: 301 VSNALIDMYGKCKHIGDALMVFETMNEKDIFSWNSIISVHEQCGDHDGALRLFDKMLGSG 360

Query: 365 ILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMYAK 424
            LPDLVT+TT++PACSHLAALMHGREIHGYMIVNGLG+D +NG +D LLVNNAVMDMYAK
Sbjct: 361 FLPDLVTVTTILPACSHLAALMHGREIHGYMIVNGLGRDGDNGVIDDLLVNNAVMDMYAK 420

Query: 425 CGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLVGV 484
           CGSM NA K+F+ M+NKDVASWNIMIMGYGMHGYGM+ALDM S MCEA  KPDEVT VGV
Sbjct: 421 CGSMKNAQKVFNSMTNKDVASWNIMIMGYGMHGYGMDALDMISHMCEAKIKPDEVTFVGV 480

Query: 485 LSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPIQA 544
           LSACNHAGFV QGR+FLA+ME  F VIPTIEH+TCVIDMLGRAGHLEDAY++AQ MPIQA
Sbjct: 481 LSACNHAGFVCQGRWFLAQMEHDFGVIPTIEHYTCVIDMLGRAGHLEDAYDLAQTMPIQA 540

Query: 545 NPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRK 604
           NPVVWRALLGACRLHGNAELA+IAA++VMQL+PEHCGSYVLMSNVYGV+GRYEEVLEVR 
Sbjct: 541 NPVVWRALLGACRLHGNAELAEIAAQKVMQLDPEHCGSYVLMSNVYGVVGRYEEVLEVRN 600

Query: 605 TMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 661
           TMKEQ+V+KTPGCSWIELKDGVHVFLTGDRTH ELNALT+QLCDIGFILDEVLNLY
Sbjct: 601 TMKEQHVRKTPGCSWIELKDGVHVFLTGDRTHLELNALTSQLCDIGFILDEVLNLY 655

BLAST of ClCG04G003540.2 vs. TAIR 10
Match: AT3G14730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 672.9 bits (1735), Expect = 2.6e-193
Identity = 323/584 (55.31%), Postives = 426/584 (72.95%), Query Frame = 0

Query: 67  NVTTCIAFLQSCADHKTLNKGKQLHALMITYGF-SPSPPSITTLINMYSKCGRMEEAILV 126
           NV TCIA LQ CA  K    G+Q+H  M+  GF   SP + T+L+NMY+KCG M  A+LV
Sbjct: 59  NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118

Query: 127 FHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVR--TCCEV 186
           F     ER+VF YNA+ISGFV NG      + Y++MR  G++PDKYTFP +++     E+
Sbjct: 119 FGG--SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMEL 178

Query: 187 MEVKKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIR-DVVLWNAMING 246
            +VKK+HG +FK+G + D +VGS LV +Y K  S+EDAQKVF+EL  R D VLWNA++NG
Sbjct: 179 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 238

Query: 247 YAQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSG 306
           Y+QI   + AL VF +M  EG+  SR TIT++LS F + GD+DNG+++HG+  K G  S 
Sbjct: 239 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD 298

Query: 307 VAVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLG 366
           + VSNALI MYGK K + +A  IFE ++E+D+F+WNS++ VH+  GDHDGTL LF++ML 
Sbjct: 299 IVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLC 358

Query: 367 SGILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMY 426
           SGI PD+VT+TTV+P C  LA+L  GREIHGYMIV+GL     N       ++N++MDMY
Sbjct: 359 SGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGL----LNRKSSNEFIHNSLMDMY 418

Query: 427 AKCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLV 486
            KCG + +A  +FD M  KD ASWNIMI GYG+   G  ALDMFS MC AG KPDE+T V
Sbjct: 419 VKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFV 478

Query: 487 GVLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPI 546
           G+L AC+H+GF+++GR FLA+ME+ ++++PT +H+ CVIDMLGRA  LE+AYE+A   PI
Sbjct: 479 GLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPI 538

Query: 547 QANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEV 606
             NPVVWR++L +CRLHGN +LA +A +R+ +LEPEHCG YVLMSNVY   G+YEEVL+V
Sbjct: 539 CDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDV 598

Query: 607 RKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQL 647
           R  M++QNVKKTPGCSWI LK+GVH F TG++TH E  ++ + L
Sbjct: 599 RDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWL 636

BLAST of ClCG04G003540.2 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 419.1 bits (1076), Expect = 6.7e-117
Identity = 218/579 (37.65%), Postives = 348/579 (60.10%), Query Frame = 0

Query: 65  LDNVT-TCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAI 124
           +D+ T +C++  +S +  ++++ G+QLH  ++  GF        +L+  Y K  R++ A 
Sbjct: 193 MDSYTFSCVS--KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSAR 252

Query: 125 LVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCEV 184
            VF D   ER+V ++N+II+G+V+NGLA KG   + QM + G+  D  T   V   C + 
Sbjct: 253 KVF-DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADS 312

Query: 185 MEV---KKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMI 244
             +   + +H    K     +    + L++ Y K G ++ A+ VF E+S R VV + +MI
Sbjct: 313 RLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMI 372

Query: 245 NGYAQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYD 304
            GYA+ G   +A+++F  M  EGI+P  +T+TA+L+  A    LD GK VH  + +    
Sbjct: 373 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 432

Query: 305 SGVAVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKM 364
             + VSNAL+ MY KC  + +A ++F  +  KDI SWN+II  + +    +  L LF+ +
Sbjct: 433 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL 492

Query: 365 L-GSGILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVM 424
           L      PD  T+  V+PAC+ L+A   GREIHGY++ NG   D          V N+++
Sbjct: 493 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH--------VANSLV 552

Query: 425 DMYAKCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEV 484
           DMYAKCG++  A  +FD +++KD+ SW +MI GYGMHG+G EA+ +F++M +AG + DE+
Sbjct: 553 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 612

Query: 485 TLVGVLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQK 544
           + V +L AC+H+G V +G  F   M  +  + PT+EH+ C++DML R G L  AY   + 
Sbjct: 613 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 672

Query: 545 MPIQANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEV 604
           MPI  +  +W ALL  CR+H + +LA+  A +V +LEPE+ G YVLM+N+Y    ++E+V
Sbjct: 673 MPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQV 732

Query: 605 LEVRKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSE 639
             +RK + ++ ++K PGCSWIE+K  V++F+ GD ++ E
Sbjct: 733 KRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPE 760

BLAST of ClCG04G003540.2 vs. TAIR 10
Match: AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 416.4 bits (1069), Expect = 4.3e-116
Identity = 210/584 (35.96%), Postives = 336/584 (57.53%), Query Frame = 0

Query: 67  NVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAILVF 126
           +V T    L++C     L +GK++H  ++ YG+      +  LI MY KCG ++ A L+F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254

Query: 127 HDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCVVRTCCEVMEV 186
            D    R++ ++NA+ISG+  NG+  +G + +  MR   V PD  T   V+ + CE++  
Sbjct: 255 -DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI-SACELLGD 314

Query: 187 KK----IHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDVVLWNAMING 246
           ++    IH      G  +D+ V ++L   YL  GS  +A+K+F  +  +D+V W  MI+G
Sbjct: 315 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 374

Query: 247 YAQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGIVTKMGYDSG 306
           Y      DKA++ +R M  + + P   T+ A+LS  A  GDLD G  +H +  K    S 
Sbjct: 375 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 434

Query: 307 VAVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGTLRLFDKMLG 366
           V V+N LI+MY KCK I  AL IF  I  K++ SW SII+           L +F + + 
Sbjct: 435 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMK 494

Query: 367 SGILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMY 426
             + P+ +T+T  + AC+ + ALM G+EIH +++  G+G DD         + NA++DMY
Sbjct: 495 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDD--------FLPNALLDMY 554

Query: 427 AKCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLV 486
            +CG MN A   F+    KDV SWNI++ GY   G G   +++F RM ++  +PDE+T +
Sbjct: 555 VRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFI 614

Query: 487 GVLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPI 546
            +L  C+ +  V QG  + ++ME  + V P ++H+ CV+D+LGRAG L++A++  QKMP+
Sbjct: 615 SLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPV 674

Query: 547 QANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEV 606
             +P VW ALL ACR+H   +L +++A+ + +L+ +  G Y+L+ N+Y   G++ EV +V
Sbjct: 675 TPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKV 734

Query: 607 RKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQL 647
           R+ MKE  +    GCSW+E+K  VH FL+ D+ H +   +   L
Sbjct: 735 RRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVL 765

BLAST of ClCG04G003540.2 vs. TAIR 10
Match: AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 408.7 bits (1049), Expect = 9.0e-114
Identity = 217/615 (35.28%), Postives = 346/615 (56.26%), Query Frame = 0

Query: 57  SKLSIFQLLDNVTTCIAFLQSCADHKTLNKGKQLHALMITYGFSPSPPSITTLINMYSKC 116
           S + + Q+  N  T    L  CA    ++ G QLH L++  G         +L++MYSKC
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287

Query: 117 GRMEEAILVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCV 176
           GR ++A  +F       +   +N +ISG+V +GL  +   F+ +M   GV+PD  TF  +
Sbjct: 288 GRFDDASKLFR-MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 347

Query: 177 VRTCCEVMEV---KKIHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDV 236
           + +  +   +   K+IH    +  + LD+F+ SAL++ Y K   +  AQ +F + +  DV
Sbjct: 348 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 407

Query: 237 VLWNAMINGYAQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGI 296
           V++ AMI+GY   G    +LE+FR +    I+P+  T+ +IL +  +   L  G+ +HG 
Sbjct: 408 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 467

Query: 297 VTKMGYDSGVAVSNALIHMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQGGDHDGT 356
           + K G+D+   +  A+I MY KC  +  A  IFE ++++DI SWNS+I+   Q  +    
Sbjct: 468 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 527

Query: 357 LRLFDKMLGSGILPDLVTITTVVPACSHLAALMHGREIHGYMIVNGLGKDDENGAVDALL 416
           + +F +M  SGI  D V+I+  + AC++L +   G+ IHG+MI + L  D        + 
Sbjct: 528 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD--------VY 587

Query: 417 VNNAVMDMYAKCGSMNNALKIFDLMSNKDVASWNIMIMGYGMHGYGMEALDMFSRMCE-A 476
             + ++DMYAKCG++  A+ +F  M  K++ SWN +I   G HG   ++L +F  M E +
Sbjct: 588 SESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS 647

Query: 477 GFKPDEVTLVGVLSACNHAGFVSQGRFFLAEMESKFDVIPTIEHFTCVIDMLGRAGHLED 536
           G +PD++T + ++S+C H G V +G  F   M   + + P  EH+ CV+D+ GRAG L +
Sbjct: 648 GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTE 707

Query: 537 AYEVAQKMPIQANPVVWRALLGACRLHGNAELAKIAARRVMQLEPEHCGSYVLMSNVYGV 596
           AYE  + MP   +  VW  LLGACRLH N ELA++A+ ++M L+P + G YVL+SN +  
Sbjct: 708 AYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHAN 767

Query: 597 IGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSE-------LNALTNQ 656
              +E V +VR  MKE+ V+K PG SWIE+    H+F++GD  H E       LN+L  +
Sbjct: 768 AREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGE 827

Query: 657 LCDIGFILDEVLNLY 661
           L   G+I    L L+
Sbjct: 828 LRLEGYIPQPYLPLH 833

BLAST of ClCG04G003540.2 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 406.0 bits (1042), Expect = 5.8e-113
Identity = 209/615 (33.98%), Postives = 344/615 (55.93%), Query Frame = 0

Query: 88  KQLHALMITYGFSPSPPSITTLINMYSKCGRMEEAILVFHDPCHERNVFAYNAI------ 147
           + +HA +I  GFS        LI+ YSKCG +E+   VF D   +RN++ +N++      
Sbjct: 40  RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVF-DKMPQRNIYTWNSVVTGLTK 99

Query: 148 -------------------------ISGFVANGLASKGFQFYKQMRLEGVMPDKYTFPCV 207
                                    +SGF  +    +   ++  M  EG + ++Y+F  V
Sbjct: 100 LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASV 159

Query: 208 VRTCCEVMEVKK---IHGCSFKMGLELDVFVGSALVNTYLKIGSMEDAQKVFEELSIRDV 267
           +  C  + ++ K   +H    K     DV++GSALV+ Y K G++ DAQ+VF+E+  R+V
Sbjct: 160 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 219

Query: 268 VLWNAMINGYAQIGCLDKALEVFRRMHIEGIAPSRFTITAILSIFALRGDLDNGKTVHGI 327
           V WN++I  + Q G   +AL+VF+ M    + P   T+ +++S  A    +  G+ VHG 
Sbjct: 220 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 279

Query: 328 VTKMG-YDSGVAVSNALIHMYGKCKHIGDALIIFE------------MIN---------- 387
           V K     + + +SNA + MY KC  I +A  IF+            MI+          
Sbjct: 280 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 339

Query: 388 ---------EKDIFSWNSIISVHEQGGDHDGTLRLFDKMLGSGILPDLVTITTVVPACSH 447
                    E+++ SWN++I+ + Q G+++  L LF  +    + P   +   ++ AC+ 
Sbjct: 340 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACAD 399

Query: 448 LAALMHGREIHGYMIVNGLGKDDENGAVDALLVNNAVMDMYAKCGSMNNALKIFDLMSNK 507
           LA L  G + H +++ +G     ++G  D + V N+++DMY KCG +     +F  M  +
Sbjct: 400 LAELHLGMQAHVHVLKHGF--KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 459

Query: 508 DVASWNIMIMGYGMHGYGMEALDMFSRMCEAGFKPDEVTLVGVLSACNHAGFVSQGRFFL 567
           D  SWN MI+G+  +GYG EAL++F  M E+G KPD +T++GVLSAC HAGFV +GR + 
Sbjct: 460 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 519

Query: 568 AEMESKFDVIPTIEHFTCVIDMLGRAGHLEDAYEVAQKMPIQANPVVWRALLGACRLHGN 627
           + M   F V P  +H+TC++D+LGRAG LE+A  + ++MP+Q + V+W +LL AC++H N
Sbjct: 520 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 579

Query: 628 AELAKIAARRVMQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIE 637
             L K  A +++++EP + G YVL+SN+Y  +G++E+V+ VRK+M+++ V K PGCSWI+
Sbjct: 580 ITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIK 639

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038881250.10.0e+0091.63pentatricopeptide repeat-containing protein At3g14730-like [Benincasa hispida][more]
XP_004150613.20.0e+0090.56pentatricopeptide repeat-containing protein At3g14730 [Cucumis sativus] >XP_0317... [more]
XP_008455782.10.0e+0090.56PREDICTED: pentatricopeptide repeat-containing protein At3g14730-like [Cucumis m... [more]
XP_022152247.10.0e+0087.06pentatricopeptide repeat-containing protein At3g14730-like [Momordica charantia][more]
XP_022966216.10.0e+0085.56pentatricopeptide repeat-containing protein At3g14730-like isoform X1 [Cucurbita... [more]
Match NameE-valueIdentityDescription
Q9LUC23.6e-19255.31Pentatricopeptide repeat-containing protein At3g14730 OS=Arabidopsis thaliana OX... [more]
Q9SN399.4e-11637.65Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Q9M9E26.1e-11535.96Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop... [more]
Q9STE11.3e-11235.28Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... [more]
Q9SIT78.2e-11233.98Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A1S4E0R70.0e+0090.56pentatricopeptide repeat-containing protein At3g14730-like OS=Cucumis melo OX=36... [more]
A0A6J1DFN80.0e+0087.06pentatricopeptide repeat-containing protein At3g14730-like OS=Momordica charanti... [more]
A0A6J1HNR10.0e+0085.56pentatricopeptide repeat-containing protein At3g14730-like isoform X1 OS=Cucurbi... [more]
A0A6J1HME00.0e+0085.67pentatricopeptide repeat-containing protein At3g14730-like isoform X2 OS=Cucurbi... [more]
A0A6J1EGD00.0e+0085.52pentatricopeptide repeat-containing protein At3g14730 OS=Cucurbita moschata OX=3... [more]
Match NameE-valueIdentityDescription
AT3G14730.12.6e-19355.31Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G18750.16.7e-11737.65Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G15510.14.3e-11635.96Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G21300.19.0e-11435.28Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G13600.15.8e-11333.98Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 107..127
e-value: 0.0015
score: 18.6
coord: 516..540
e-value: 0.16
score: 12.3
coord: 582..611
e-value: 0.14
score: 12.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 441..488
e-value: 3.3E-9
score: 36.8
coord: 332..379
e-value: 3.0E-7
score: 30.5
coord: 133..181
e-value: 1.4E-11
score: 44.4
coord: 231..276
e-value: 1.6E-9
score: 37.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 137..169
e-value: 6.8E-6
score: 23.9
coord: 234..267
e-value: 2.6E-9
score: 34.7
coord: 335..368
e-value: 4.1E-5
score: 21.5
coord: 445..478
e-value: 6.4E-8
score: 30.3
coord: 106..128
e-value: 0.0017
score: 16.4
coord: 416..443
e-value: 0.0018
score: 16.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 134..168
score: 11.202506
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 333..367
score: 10.98328
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 442..476
score: 11.553267
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 232..266
score: 13.274192
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 386..624
e-value: 3.2E-35
score: 124.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 53..186
e-value: 2.9E-24
score: 87.4
coord: 187..286
e-value: 4.9E-21
score: 76.9
coord: 287..385
e-value: 1.3E-18
score: 69.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 210..602
NoneNo IPR availablePANTHERPTHR47928:SF61OS01G0818200 PROTEINcoord: 66..638
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 66..638

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG04G003540ClCG04G003540gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG04G003540.2-exonClCG04G003540.2-exon-CG_Chr04:13638318..13638323exon
ClCG04G003540.2-exonClCG04G003540.2-exon-CG_Chr04:13639473..13641449exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG04G003540.2-cdsClCG04G003540.2-cds-CG_Chr04:13638318..13638323CDS
ClCG04G003540.2-cdsClCG04G003540.2-cds-CG_Chr04:13639473..13641449CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG04G003540.2ClCG04G003540.2-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding