ClCG04G003030.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG04G003030.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr04: 11196389 .. 11198923 (-)
Sequence length534
RNA-Seq ExpressionClCG04G003030.1
SyntenyClCG04G003030.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTGTGTGATAATAGTTTTCAAACCAGTTAACCTTGTACTCATGGTTATCTTATTAGCTCATGAGGCATGTCTCCGTGCATGTGTGACAAATTATTCTGAATGTATTGAGTTGGTCTACCACCAGCAGACTGAGTGTATTAAGTTCGTTTGCACTAGTGGGTTGTGTATTGAGTTGGTCTACACTAGTAAAATTTTGGTACAGGTTTAGTGAGGGTGTTACAAGCTCATGGAGTTCATGAAATGCTCTCTGAAATGTTGATTTAAGAAATTCATGTATTATATTTAAGCAAAGTATATCATCCACGGTTTTATTCACTGAAGCTGAATTATCACATCTATTTTATAAATTGTCACTCACTGGGGTGTTAGCTCAATCTTTTCTTTTATGTTCCCTTCCTCCTAGATTAGGTAACAAGAGAATTTTAGGTGCCTACTAAAGACAAAGCTTGCCACTCGTTAGACATTTTCCAATAGTATGTTTATGGGTTTTGGGTCTACATGTAGATCAGAGTTTGTATATGTGTTAGAACAAAAACAAATCATGAAGTTAAAGTTGTCAATTGTAAACTGTTTCCTTAGGTAAATTTTATGTCAGGGAATGTTTTTGAGTTAATAAAATTTGCATGTTAAAATCATGTAATAAAATAAATTGTAACATAAAAGTGTGGGTAGCTTGGGAGATAGATACTGCTACAGGGAGTGGTATTTTTCGTCTTCACATCTCTCTCTAGATTTAATAGATTAATCTGGGATGGGATGTGACAAGTTGGTATCAGAGCATGGTTTAGGAGTCATGGTTTAGGAGTCATACATTAGTAAGTTAGAACATGTGTTAATAACATAAGTGCATTGTAGGAATCATGCCTCAATGTGGCAGACTTCGTTGGCAACTTGCATTGGGAATTCTTGATGCTACCAGTGAACTTGTTGCGGGGAATGAAGAGTTTGAAGTTGAATCTAGTAACCCTCAAGTTGAGGTAGATGTTGAAGAGTAGCTGTTGAATAGAGGTGCTCCAAGGTTAGTAGCAAGAATAAGGGCAGGACAAGAGGATCTTGAGAAAAAATACGAAATAGAGCATTTGAAGGCTCTAGGTGCTATAGCATTCACAGGGGCAACAAATCCTATTGATGCTGAAGTTTGGCTAAACATTATAGAGAAATGTTTCAAGGTAAGGAGATACCCTAAAGATCAAAAGGTAGAGCTCGCTATCTTCCTACTTTAGAAAGAGCAGAAGACTGGTGGCGAATGGTTGAGATCAGACGAGGAAGTGTTGATAAACCTACTTGGGAAGGATCCAAGAAGGCTTTCTATGACAATATTATCCCCGATCGTTCTGTGATGCAAAGCGGAATGAGTTCCTAAAACTTGTACAAGGATAGATGACAGTAGCTGAATATGAGCAGAAGTATACAAAATTGTCCAAATACGCTACCACAGTAATCGAAAATGAAATAGACCGATGTAGACGGTTTGAGGAAGGACTAAGGGAGGAAATTCGTACTCTGGTTAGCTAACACAAAATGGACCAAATTTTCTAAACTAGTAGATAAACTAGAAGAGATAGCTATGAAAGTGGAAAGGAGCTTGGTAGAAAAGAAGCAAGGTAGGGAGACTTAAAAACCCCAAGCTCATCACATTCAGATAGAGATGATAGTAGAAGATATACATTAGGGGTTACTTGTGACATCCCAAATTTTCAGGTAACTTTAAGCTAATTATCTTGAATTAATTTGGGTTAATTGTTAGATTGTTTAATTGAATTATGTGGAAAGAATAATTCACTCAAAGTTAACAAGACCAAAGTTCTGGGATTAAATTTAATTAGTGAGATTTCAATGTAATTTGAGTTTTAGAAGTTGAATTCAAAGTGAGGAGTTGGAATTTGGTGGATTAAGAAGAAAAAGGGATTTATTTTTTAAATTTTGGTTTGGAAAATTAAATAATTTATTGTTGGTATTTGGGAGAGTAGTATTGATTGTTGGAATTTGTAGTAATTAAGTGAAAAGTTGTGTTGTGAAAAGAAAAATGAAAAGTTATTAATTTTTTTAAAATTTTATTTAAAGGTGGTTAGGGTTTTGACTAGGGGTTCGGCTATTTATTATAGCCACTTAAGCCACTCAAGCCAGTTAGCCATCACCCAGCCTGAGGTTGTCTTCTTCTTCCTCCTTGTTTCACCATCCACGAAGAAAGAGAAAAAGTTCATTTCCCTCCGTTTTCGGCTTGCCAAACGCCCAATCCGCCGCACTGACGTCAATCCCGCTACCGTCGACAGGCGAGTAGCCTGTTCCGCTGCCTGCATGCTATCGTGCGCCATTGCCTTCACCAACCGCCGGTAGTTTTTTCTCTTCGTTGGTTTCTTGGGTTCTTGGTGGGCTTTGGTAAGGAAATTGGTCCTCTCGTCGATTTGTCATGATTATCTATCATGTTGGCTTAGCTATTGATACTCTTGTGATAGGATTGTAGATTCAAAGTTTGAAGGGGCTTGGAGCCGAGAGCACGGTCGAATTTGTTGAAACTAGTGGTGAGTAA

mRNA sequence

ATGGTTTGTGTGATAATAGTTTTCAAACCAGTTAACCTTGTACTCATGGTTATCTTATTAGCTCATGAGGCATGTCTCCGTGCATGTGTGACAAATTATTCTGAATGTATTGAGTTGGTCTACCACCAGCAGACTGAGTGTATTAAGTTCGTTTGCACTAGTGGGTTGTGTATTGAGTTGGTCTACACTAGTAAAATTTTGGTACAGGTGGTTAGGGTTTTGACTAGGGGTTCGGCTATTTATTATAGCCACTTAAGCCACTCAAGCCAGTTAGCCATCACCCAGCCTGAGGTTGTCTTCTTCTTCCTCCTTGTTTCACCATCCACGAAGAAAGAGAAAAAGTTCATTTCCCTCCGTTTTCGGCTTGCCAAACGCCCAATCCGCCGCACTGACGTCAATCCCGCTACCGTCGACAGGCGAGTAGCCTGTTCCGCTGCCTGCATGCTATCGTGCGCCATTGCCTTCACCAACCGCCGTTTGAAGGGGCTTGGAGCCGAGAGCACGGTCGAATTTGTTGAAACTAGTGGTGAGTAA

Coding sequence (CDS)

ATGGTTTGTGTGATAATAGTTTTCAAACCAGTTAACCTTGTACTCATGGTTATCTTATTAGCTCATGAGGCATGTCTCCGTGCATGTGTGACAAATTATTCTGAATGTATTGAGTTGGTCTACCACCAGCAGACTGAGTGTATTAAGTTCGTTTGCACTAGTGGGTTGTGTATTGAGTTGGTCTACACTAGTAAAATTTTGGTACAGGTGGTTAGGGTTTTGACTAGGGGTTCGGCTATTTATTATAGCCACTTAAGCCACTCAAGCCAGTTAGCCATCACCCAGCCTGAGGTTGTCTTCTTCTTCCTCCTTGTTTCACCATCCACGAAGAAAGAGAAAAAGTTCATTTCCCTCCGTTTTCGGCTTGCCAAACGCCCAATCCGCCGCACTGACGTCAATCCCGCTACCGTCGACAGGCGAGTAGCCTGTTCCGCTGCCTGCATGCTATCGTGCGCCATTGCCTTCACCAACCGCCGTTTGAAGGGGCTTGGAGCCGAGAGCACGGTCGAATTTGTTGAAACTAGTGGTGAGTAA

Protein sequence

MVCVIIVFKPVNLVLMVILLAHEACLRACVTNYSECIELVYHQQTECIKFVCTSGLCIELVYTSKILVQVVRVLTRGSAIYYSHLSHSSQLAITQPEVVFFFLLVSPSTKKEKKFISLRFRLAKRPIRRTDVNPATVDRRVACSAACMLSCAIAFTNRRLKGLGAESTVEFVETSGE
Homology
The following BLAST results are available for this feature:
BLAST of ClCG04G003030.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG04G003030.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG04G003030.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG04G003030.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG04G003030ClCG04G003030gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG04G003030.1-exonClCG04G003030.1-exon-CG_Chr04:11196389..11196446exon
ClCG04G003030.1-exonClCG04G003030.1-exon-CG_Chr04:11196586..11196854exon
ClCG04G003030.1-exonClCG04G003030.1-exon-CG_Chr04:11198717..11198923exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG04G003030.1-cdsClCG04G003030.1-cds-CG_Chr04:11196389..11196446CDS
ClCG04G003030.1-cdsClCG04G003030.1-cds-CG_Chr04:11196586..11196854CDS
ClCG04G003030.1-cdsClCG04G003030.1-cds-CG_Chr04:11198717..11198923CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG04G003030.1ClCG04G003030.1-proteinpolypeptide