ClCG04G002910.2 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG04G002910.2
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	tRNA-binding domain-containing protein
Location	CG_Chr04: 10913863 .. 10930882 (-)
Sequence length	1677
RNA-Seq Expression	ClCG04G002910.2
Synteny	ClCG04G002910.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAATGGGTCAACAATAGAGCAATTTCCCTTTTTTGTCATCCACAGTTCCCAAACAGTGTGGGGGCAAAAACCATCTCGATATCGACTAGTATTCCCAATCACCCCCAACGATGGCTTCTCTACCAACGGCCGCTGCAATTGCCAATGTTACAAAAAGTGCCAGCAATCGCCGCTTCTTCTTCTTCTCCTCTTCCCTTGCCCATAACTTCAACCATTATCGCCCGTTCTTCGCTGTACGTCCAACTTTTTCTAGTTTTACCCCACCACTTGGTAAGGATAATGTCGCTACCAGGGGAAGAATCTCCAGAAATGGTGCGCGGTTTCCCTTCTCATTTTGCACTACCGCATCCACCGAGTCTGTCACCAGTGACGCTGCCATTGCATCGTCTTCCACATCATTGGATAAGGACGATGATCCGGAAAAGAAGATTAAGGATGCGGCCGACACGCTCGATATTAGGGTTGGGCGAATCATTAAGGCTTGGAGACATCAGGAGGCTGACTCTCTTTATGTAGAAGAGGTTGACGTTGGTGAACCCGAGCCGAGGCTTATTTGCAGTGGCCTTGTTAAATATATCCCTCTTGATCAACTTCAGGTACTTAAGTTTTCCTTCTTAAAAGAAAAATGTTTGAGGGGACATGGTTCAAAGAGAAACTCTCCCTTATTTTACTGTTATTCTTGTCCATAGTATAACTTGATACCCAGTGTAGAGATACCCATGTAGTACCTATTCATTTTGTTTCATGGCTTATAGATTGATTTCTTTAGCATTTAGTCTCTGTAATTCTCACTTTTAATTTATACCAATTGGAGTCTTTTCTTTTTCCTCCTATCTTGTACGTTGTGTTTTTGATCAATTTCGAGGAGGAAACAGCAGACAGTATGAAATGGAAACCTCAGGAACCAATTTCTTCTTATAGCAAACATCAGATACCAGTTTTTAGAGAGTGGAAAAGGTAGAGGAAAAATGTAGGACTACTTGGTTTTGTTGAAGGATGTCTCATAGATGAAGGAACTATCTTATGGGTGAATTATTTTGTGTGTGGGTGGAAGAAGCCTCGCGGTGGAACTAAAGTTAAGAGGAGGAATTATTTATTTATTATTTTTCTAGAATCTTTATTACAAGATGTTGGGATGGCCGCGTGAGCACAATATCTTGTAGTTCAGCATTATCACTACACACTAATAACTAATAAGTATGGTATGGTTGGCAGCTTAGAAATATAAAAGATGGAACTTTGAAATGTTAGGCCTCATATTACCAATACTTATGTTTGTGTGTTATGCATGTGTCGTTACCTCTTGGGCTGTTATTTTGTATTTGGGACTTAGTGATGTAAGAAGAATGGGAGTTGATTGGGTAATTAGACAATATTCAAGGTTAATTCCCCTTTTACCCCCACTTGTAATAAAACTCTATAAATAGGAATCTTTCCCTCTTGTATGAAACACATTTTATCATTCTAATAAAGGATCCAAAATCTTGATTCTTGGAGGTTTACTCCTTGAGACTACATAGGCTACATCATTTTGGTATCAAAGTGACCGTCTGGGCCAATATTGACAGTCGCTGGTGGAAGCCTGGAAAACTCTTGGTGATGCCAATCACGAGAGGGAGCTTAAGTGTTGTGCTCGTTGCCGAACAACACATATCTAATTAGGGGGAACCCTTGAAATTCCAAGAAAGAAAGAAAAAACCGAAGATTCATCAAGATTTTGCAAGAATGGACTATTGTTGATCAAAGAAGTTGTCCAAAAAGAAATACAACAGTTGTTATCGGCAAGAAAATCAAATTTACTTCCGAAAACAGTGCTAGAATTTTGACTTAAGTGATTTCGAAGAAGACTTTTAACATCGATTTTCTCAAAGAACCTATCATTATCCACATTGGAAATTTGATTCTAGTGACTCTGATGATATTTCTAAGGCAGTTTGGGACGGAATAAGAAGGCGAAAATATCGAAAAGGGCCTAATGATCCAATTAAACCCATTTTTCAAGAAATCAACATAAAGATTGGGAGTTAGATGAATTAAAGAATCATTAAGGATCATCAAGAATGGACTTTTACAAACCAAGAATGTTCAAGACTCAAAATTACTCTTTTGGTTATGAAACACAACCAAGAAAGGTTGATTCAAGAGAATCAATGGATGAGTACTATATCCACTATATTCAAGAATCCAACAAAATTACTATTTTGATCCCGTAGCATTGGAGGAAATGAAGAAAACAAGAAAAGAAATCCAACGTTCATTGAGGAAAATGACTCAATATATTGATCAACCATCAATTCATTTGCAAGAGTTTAAGAACGGATTGATTTCATATACCAAAGGAAAAGCAAATGAATCATGGGGGAAATTTTTCAAATAAAAAATCTTGAAGATAACATTGAAGAAAAACAAGAATTTGAAGATGTTGATTTGGAAATAGTCTCAAGTGAAGAAGAAAAATCTAACAAAGAAGATGGAAAAGAAGTATCGAACACTGAGCAAGAATTGACCAAGAACACGTCACATTCATTGTGGTGGAAATGAATCACCAAACCGTCGAAGAACTTGAAGCGAATGATAAAGAAGACATGATTCTTGAATGATTCTCTTTGGAAGGTGGTTTTTTAGTAATTGGTCCTTTGAATTAGAAGTGTTCAAAAAACCCGGTAACCCGACCTACCCAGACTTCCCAACCCAAACCGTAGGGGTTGGGTTGTGTTAATTTTATTTTGGGTTAGGTTTGGTTGCGAAATTTTTAATTTTTAATTTTGGGCTGGGTCGTGGGTTGGTGATTTTTCCACCTGGGTTAACCCAAACCAACTCGGCCATATATATGTGGATATATATATTTTTTAACCTAGTAAAGTTTAACCTTCGGGAGAGCGAGAGAGCTATAGAGGGACAGAGAGCGACAGAGGGATAGAGAGAGCTAGAGAGCGAGAGGGAGAGCGGGAGAACAAGAGAGAGAGAGAGAGAGAGAGAGCGGGAGAGAGGGCGAGATAGAGTGAGAGAGCGAGAGAGAGCGGGAGAGCGAGAGCAACCTGGTGACCCAACCCGACCCAACTCGAAAATATTGGGTTGGGTTGACCCTCCAAATTGGAACCGATGGGTTGGAATGTATGCCAACCAGGAATTTTAGGTTGGTCCAAAAAACACCCCTAACCGGGTCCAACCCAACCCGTGTACACCCCTACTTTGAATATGGTTTTGAATGAGCTTGAAGGAGGCATCTTTATTGGTTTTATGGCCGATGTTGAAGTTCATCTTTTGGTGGTAATATTGGATTTTTTTGTCTCGAATTTATCCCTTTAATCATAATATATTTGTTTTATATGTAGGAGGTTGGTTTGGTCATAACCCGTTGAACAAATTTGTTTCATTCCTTGTTTGCTTCATAATATTTTTCTGTTTAAAACTCAAGGACGAGTTTTCTTTTTGTAGGGGTAGAATGATGTCAGAAGAATAAGGATTGATTGGGTAATTAGGCAATATTCTAGATTAATTCCCTTTTTACCCCCACTTGTAATAAAACTCTATAAATCGGAACGTTCCTCTTTTGTACGAAACACATTTTATTATTCTAATAAAAGATTCAAAATCTTGATTCTTGGAGGATTACTCCTTGAGTGTCACACCCCCTCCCGAATTACCATCTTAAACACGTGAAGAGGAGTGAAGACAACAGACATTAACTTTTGGTGACATCTACTGCCCCGTCCTTCACTCCTTTACACACTTTTGCATGCACAACTTAGCAAACAATCTTAGATTAAACGTAGAACTTGAAGATTATTCAAAGCTTTTTTAAATTCAAAACATAATATAAAAACTCCTTAGAATCTCAACCCCAAGTATAATATGAAAAGCTTTCCTATGACAGACTTTGACTTCGTTGGCAACGGGAACCCTTTTGCTACCTGGAAAGAAAAACATAAAAGAAAAGAATGAGCTACAAAGCCCAGTGAGTGGTTAAACATCTAAACAAAAGGGTAACACACGACCCTTAATAGTTCATCAACAAAGCAGTATAAAACTAGAATTTCAAAATTAACGAGGTTATCTACTCAAACCTCACTTCCAAGGCTTTACCCGGTACTGTTTTCAATTCTGCTGGCACCACTCGGTTCAGCTACTCAATTTGTCCCCTATGTGCACATAGACTTACCTTTGAGGGATTAGAAATTAGACCCGTCGACCCTCTGACCATCCTACAAGAGATACTTTCCACAGGATCAGGAATTAGGTTTCTGATAACCCCCTGACCATCCGTTGAGGTTCTTTCTCCGACACAGGATCAGAAACTAGATCCTTGGATCCTCTGACTATCTTGTACGGCCTTAGCTTCCTTTACCATGCATTAACATACTCACAACATATAAAGTTTGTAAGGAATTCACAATATTACTGAATAAAGTAAACAAGTAACCACTCACTGTAGATGGAGTTTTATCATCTGAGTCCTTTTCCTTGCTTTGGATCCTCTTATTCCTTTGAGACCTAGCTTGCTTTTGACACCCAAGCACACAACTAGGCTTTTAGATCCCAAATAATAGCAAATGACAACACTTTGGAGCCTTAGAAACCTCTCTTGGATGCTTGGAACTGACTGTTGGACTGGTCTTGTTGGACGCAGGGACTACCTCTTGGACGCCTAGTCTGCTGTGTTGGAAGCTCAGCTCCCGCTGTTGGACGCCTAACAGCTTGCTGATGGACTGGATACAAGGTGATGGATGCCTATCTCCCTCTTGGACGCCTAGGGCTTCTCACAAGTTCCACTGAAAACCTCTCCTTTATCTCTCAAAGCCTCTAGAGTGAGAATTTTCTCAAAATTTTTGTGTGATTCCTTTTCCAAACTCATGCCCTATTTATAGGAGTTGGATGACAAGCCTTGTCATCCAACTTCACATCTCAGCTTGAAACTTATCCAAGTATGTGGCTTCCAATATGTTAACCTAAGCATGCATGAAGATACCTCCTCCTTTTGAGTTGTTCAATTCTCTATGCGTGCCACCTCCTACTTTCTTTCTACCCTTTTGGACGCCACCCCAAACTATTCCCGAGCCTTGTCCTACATTCAACTTAGCTTGAAATCATGTCCCATGCGTCCAACTTGTGTGTTTTTAGAGTATACTTCTTTCGCTTCCTTGTAACCAATAAGAATCATCCAACATTTAACCATATATCCTCCAAAGTTAGAGCATGCGCCCAACATCCCAAAAACCTTGTACTTAGCCAAATTTTCCTCCTCTTAAGGGAGTATGCATCCAACCCTTACTTTGGCCTACATACCATGCGTTCCAACCTTGCACTTTGCCTCAACTTTGTACAACTTGCTCACTCATCACCACCTATGAACCATGCGTTCAACTCTCAAGTTCCAAGTCTCTTGTACTTAGTCAATTTTCCAACCTTCATAGCCTTCTATGCATCCAAATCACAACTTATTGATTTTGGTCCTATTGTCCTTCCTTTAGTCTAGAAAAGTTGTTCCATACTTGGCTAGAATTTCAATATTTTTGCCTTATGCGTTCAACCCTCTCCTTATGCGTTCAACCCTCTCCTTTTGCCCTAAGTGATACCTTTCCAACTATTTGAACTTCTTCAATACTTAGCTATAATTCTCCTGAAACTTGGACTATGCGTCCAACCTGCCTTCTTTGGCTTAGGTGTTCCTTTCAACAACCATAAGTTCCACTCAGTCAAAATTTTTCCAAAAATTCAACCATGTGTCCACCATGGTCCTACTATGCATCCAAGACCTATTTTTTCCTCCAAGACATATGTTTCAATCTTAGTTCCAAGTTAACCAAGTTTTTTTTTGTTTTTGAAAAGGAAACAAGTCTCTTTTATTGATATAATGAATTGAGACAATTTCTCAATCTCAAAGATACAATATAAAGTAATTTAAGGATCAATGAGTGCACCAGGACATCTCAACTAAGTTGATACCTTCCTAGCACTCTTATCATATCCTACCGAAACAAATTAAAATACACTAATGAAACTTAGAAAAAGTTCCCAAATACAAGAGATCAAGCCGGGAGGAACAGCCGAAGAAAACTAAACAAAATATGTCAGCAAAAAACAAAACAACTCATGAATTCGAAAATGGAAAACAAAGCTGCCAAAACGTAGGTTGAGGAGGCTAATTTGCTGTAGAGCCGTCTGGTCCAAGGGCTTTGTTTTTGCCCAAGTTAACCAAGTTAACTCTCAACTATGTTTCCAACTCTTACTTCCAACACTTAGTCAATTTTCTTCTACTTTTCAAGCCTATGCGTTCCCTCCCCCCCCTCCCCCCCCAAATAGAGGAATGAGAATACATGGCGGGGACCTAATCAGAGAATAGTTATTATCGTGGGCCCTTACAATGTTTCATATGCAAAGAACAACATAAAGTGAGTGAATGTCTGAACTGAACTATGTTTAACACCTTCGAAGCTGCATTGACAACTCTCTCGGAAAGTAAGACTGAACAAACAAACACTGAGATCACTCCAATAGAGGAGAATGATAATCCTTGAATGGGAGCACTGAAATTTCTATCAGCTCTCCAAAGGAAGATAGGGGAAGCAAAGGAACCCTTGGAGCTAGGGCTCATGTATGTAGACACTTGGGTCAACCATAGATCGGCCAAGAGTACTATGGTCGACTCTGGGCCACCCACAATTTTATGATTGAGGTAGAAACACGTCAACTAAACGTTCGATGGGAGAGAGACGTAGGGAAGATGAAAGGCCTGCAGCCTTACCCATCATAGGAGAAGTAAAAAGAATAGTGGTTAAGATGGGACATTGGAGTCAACATGTCGATATCGCAATCGTCAAGATGGACGATTTTGATGTAGTATTGGGGATGAAATTCTTGCTCGAACACAAGGTAATATTGATGCCATTGGCAAAATGCTTTATAATTACGAGATCTACTCCCACTGTTGTTTAGACCAACATCAAACAGCCGAATGGGAAAAGGATGATCTCGACCCTCCAGCTTAAGAGGGGTCTCATGCATGATGAACCCACATTCATGGCCATCCTTGTCGAGTTAGTTGAGATGAAAGAAGAGACCAACCCCGAAGACATTTAGTTTGTTTTGGAAAAATATCGAGATGTTATGCTAGACAACCTACATAAGTCCTTACCTTCAAGAAGCAGGATCGACCACGAAATTGAACTGTTACCAGAGGCAAGGCCGCCTACGAAGAATGCCTATCATGTAGCGCCACCCAGATTGGCAGAACTTCGGAAGCAACTAGATGAGTTGTTAAGCGCGGGGTTCATTTGACCAGAAAAAGGCCTTTACGGAGCTCCAATGTTGTTTCAAAAGAAGAAAAACGGAAGCCTACGGCTATGTGGCTCCATGGCACCGAATATTTCTCAAAATCGGACCTCTGATCAGGGTATTATCAGGTGCCAATAGTTGAAGGGACGAACCAAAGACGACATGTGTCACGAGGTATGGGGCCTTTGAGTTCTTCGTAATGCCCTTTGGCCTCACTAATGCTCTGGCTACTGTCTGCACACTGATGAATTAGGTTTTTCCTGAGTAGCTCGAAAAATTTGTTGTAGTGTATTTGGACGACATTGTGGTTTATAGTGCGACGATGGAAGACCACCAACTTCACCTCAAGTTGGTCTTTGAAAAGTTGAAGAGGAACCAATTGTATGTGAAAAGAGAGAAATGCTCCTTTGCTTTCACCCATCAGATTAAACTTTTGGGTCAATCAGCGATTTAATATTTATAAAATTATTATAGGCGACATTGCCACCAACTTGTGTTTCTCTTTTTCTCTTCTTACTTGGCCGTGAATGTGTGGATCAAGATCATAACACCATTGTGTGAGTGATCATTTTTTAGTGTTTCGTGGGTATTTGTTAGGCAAATTAGAATGCTAAACTAAGGAAACCTCCTTTTGGTTGCACGGGTTTAGAGAAAAAAAGTTCATCATTGAATTAGACCTCATGACAAGAAACATAACTTTCATTATCAAAGGAAAAGATACCAAAAGAGGAGATGAGGTATCTCCACAAAACAACTTACAATGAAGGACCTTAACTAGTATAAATTTGGGTTAGACTATAATTACAAAAGAATTTAGAAGTAGAGAAATGAGTAGAAGCAAAAAGAGTAACCATATTCTGAAAAATGTCCATGTTAGTTTCTTTACCACAAAAGATTATAGAGTTTATTTTAAATCACAACCTCTTGTTAGGCTACCACCTAACAAGTATACTCAAGAATATCGAAAGTTCAAAGAGTGCTAAAAGATAGAATTATATTGCAATATCAATGAAGAATCTACAACATAGCCTTTTGAGGGGGCTACACTCCTAGATTTTCACAATGGAAATTCCTACCAAAATCTTCACATCTAAGTTTTTGTTTCGTAGTCTGGTTGATCCTTCTCCCTTAGGAATGTTAGCTTTTTGGTTCTTTGAAGGATTAAGATCCCTAGGAAAGTGGGGTTCTTTACTTGGCAAGTTCTACATGGTCATACTAACACGATGATTGGCTTGTGAGGAAGTTGCCCTTGCCTATTGGACCATTCTGCTGTATTCCTGTCGGAAGGTGGAGGAAGATCTAGACCATATTCTTTGACGTTGTGAGTTTGCGAGTTTCGCTTGGGACTTTTTCTTCCAAATGTTTTATTTCTTGTATGCTCATCACAAGACACTAGTGTTATGATCGAGAAGTTCCTCATGAATTCGCCTCATTGGGAGAAGAGTCGCTTTTTATGTCTTGCTGAAGTGTGTGCGACCTTATGGGTTTTGTGGGGAGAGCAAAATAGTAGGGTGTTTAGAGAAAGGGACCCTAGTGAGATTTGGTCCCTTGTTCACTTTCATGTTTCTCCATGGACTTTGATTTCAAAGATCTTTTGTAATTATATTCTTTAAGCGTTATTTGCATAGCTAAAGTCTCTTTTTGTAGAGGGAGTTTCTTTTTTGTAAGTTTGGTTTTTTGTATGCCCTTGTATTCTTTCACTTTTTCTCCATCAAAGTTGTTTCCATCAAAGGAAAAAAAAAGCTTTGTGTTAGGAACCAAGGTAGTATGGGCTACCTCTGTCCCACATTGGTTAGAATGGGATGACCAATGTGGTACTTAAGTGGCTTGACTCTCCCACCTCAATAGCTAGCTTTTGGGGTGTGGTTCTCTAAGATGCTTAAGTACCTAACAATGGTATCAGAGTCAGTTGTTGACGTTCCAGAATGGAACCGGTGGAGGGTTTTGACCGGATGTAGCTTAGTGAAGTATCGTTGGAGTAGCGGCCGGGATGTTGGCTTTCCGAGGATGGGATATTGTTAGGAACCAAGGTAGTATGGGTTACCTTTGTCCCACATTGGTTAGAATGGAACCACCATTGTGGTACTTAAGTGGCCTGGCTCTCCCACCTCAATAGCTAGCTTTTGGGGTGTGGTTCTCTTAGGTGCTTAACACTTTCTTAAATTTCTCGTTGGAATTTGTAACCAAGATAGAATGGGATTATAGACTAAATGGGTCTTTCATGGATGATATTGTAAACTGTGTATCATGTTTTATTGTATGTATGGTTTAAACTTTATACTCAACTGCAATGTCCTTTGGCTCCGTTTGATTTGAACATAAACAACATATAGGATAGAAGAGTCATTGTCCTCACAAATTTGAAGCCAAGAAATATGCGGGGCATCAAGTCTTGTGGAATGCTAATGGCTGCTTCTGATTCTTTGCACGAGAACGTTGAACTTCTTTTGCCCCCTGAGGGTTCGATTCCAGGTGAAAGAATATGGTTTGGATCCGAAGATGAAAAAGGCAACCAACCTGATGCTGCTACCCCCAACCAGGTAAAGAAAATTGCTTTGAATAATTTGGATCCTGCAGGATTGGAATGCCATTTTATAATGTTACATATTTCTGTGCAAATTTTAACATAAACTTGCTTAGACATCTACGCATTAATTACCTACATTATTTGAGCTCTAAATATCAAACTGCTACGTCAGGATGAGTTCTATCTCTACACGATGTAGAAATTTTTTTCCTTTTTTTATTTGAAGGAAACATAAATTTTCATGTGGTTGATAACAAATGAGTTTATTGTAGCTGTGCTTTACATCTTTACAGTATTCATGTCTGATGTGTTACGGCCTTTTATAATCCTAGTGTTATACCAGAATGTTCAACTTCTACCTACTCGAAAACATTTTGTTTTGAGCTACGAAAGAAAACTTTTATGAGAATGGATGATACCACAGAAACTAACTGAACACAGCAAAAGGCTTGAAAGCAGCCCCCACATTATCAACAAACTTACACAAGTAATAATTACAAGTTCCCTTTGTATTCTGTTTTTCTATAAAAGAAATAATAGAGGGTTTAGGGTTTTGTCCTGTCAAAAAATGCTTTCTCCTCTCTCCACGCATCCCCGCCATTCTAGCCTTCTAGCCTCCTAATTCAATCAGAAAACCAAATCTCATCCTAACATGAAAGTAACGAGATATAGGAGAATACTTTTTGTGTAAACAGTGATATGAAAGATCTCTTTGTTACAAAATTTTGCAAGCCTTGAAAATGTAAATAAAAAAGCATTCTAATCCATCCTAGTATTTGTTGCGAGGGGATATGCGAGGTCAGCCATGACTTTAAGTCGATGGTGCTACAGTCGATGCTAGTTTAGTCAGTGTTGGTTCAATCGGTCCTTGATCTAGAGCAAAGAACCTCTGCAACTGTCGAAGTGAATTCTCAACTTTTCATACAATTGGTGCAGATATGATAATGAACGGTTGTAATTCTTATAAGTTTCCATCTGATATATGACTATTATGACAAGCCATAATACGTGAAATAATCATATCTATATTCATGGAGTCGACCATAAATGGAAAGGGAGTAATGGATAAAAGTCAAAGGAGGAAGAAGATAGACTTGTCGAAGGAGGAAGAAGGGGTCTGCGGAAGCAGGCTAGAAACTTGGGAACGATTCCAAAAATTGAAGGGGTAGTTTGTTTGTAAATGCATTCTCAAGTCCTAGTTGTTGGTGAGCTTCAAAAGGCCATTGGGGGTTACTTCGGTGACGTCGTCGAGGATGAGATCGCCGGAGATGAAGCCATTGAAGGTGAAGTGATACAAAACCTCATAAAGGAGAGACAATGGCGACGATCTTCTTCCTCAGCTTAATTCTCTCCTCAATGGTTCCTTTATGGATCGTCCGTTGAAAATTTGGACGGTTTCAAATGAATCACTTTGAGGTCTTCCATGGGTCTTCTGAGGTCTTCCATGGGTCATATAGAGGTCACTCATGGGTCCTCTAAGGTTCTCTATGTGACTGCTAAGTCCTCCACAGGTTTTACAGAGGTTACTCATGGGTCTTCCAAGGTTCTCTATGTGATTGCTAAGTCCTCCATAGGTTTTATAGAGGTTACTCATGGGTCCTCCCTTTTATTGGATTGCTAAGTCCTTCTATGATCTTGTAGAGGTATTCTATAGGTCCTCCAAGGTCCCCCATGTGACTCATAAGTCCTCCATGGGACATGCAGAGGTTTCCATGAGTCCTCCAAGGTCCCCCATGTGGTATTGCAGAGGTTTTCTATGGGTCCTTCATGAGTATTACTGATCTCCCTTGTGGGAATTATGAGCCTCCACTGGCTCCCTCATGGGTCAGCCGAGCTACTTCTAGGCTCTCTCATGAGTCCTTTAAGCTATATGTAGGATTCTCTAAGCATAGTGTAGGCTCACTCATGGGTCCTTTGAGCTCACTCTAGGCTCCCTCATGGGTCGTTTGAACTCCTTCTAAGCTTTCCCATGAGTCTTCTAAACTCTTTCTAGGCTTCTTCATGGCTCCTTTAAGCTCATTCTAGGACCACCCAAATAAAAGGATATGGAATTTTTAAGGGTTATAGTCCCATGGGCATGCAAACTGAGGACTCTAGAATTACTCTCCTTGTTGGGCCTTTGGTGAGAGGGTTTGCTGAGTTCCTCTCAGACCTTACATTCTCCAAGGAGATAATTCTTCCCTTCAACAATAGTTTTCAACAATAGTTTTACAGCTCCATGTTTGAGGCATACATGCCTCCTTTTTGCCATTATACACATTGTTATTGGGAGATTGTTTAGCGGCCAAGATTGATGGGTGGTTTGGATGTTGACAATTTTTTGTTTGTGTAATCACGCTTTGTTAGCAAAGTGGATTTGGCGTTTTCTTCATGAGCCTACTGCTTAATGGTATGTTGGCCTGCTGTTGTTCGACGTGGGTCTACCGTCTACTCGATCTCCTTGGCAGTGTTTTTTCACAAACTATTCTTTTGATTGCCTCTCGTACTTGAAATTGTCTTGGTACCGACACTACTATTTCTTTCTGGAAGAATCCTTGGTTGGACTGTGGTGTACTTTGCAATGTTTATCCTCGATTATTTTGTCTTGCGCTTCAACCAGATTTTTCGGTGGCTAATGCTTGGGTTGCTGAAAATGAGGCTTGGGACTTGTGTCTTTGTCGTAATCTTAGTGATTTGGAGACTATTGAGTGGACTTCTTTGTCTCATATTTTATCATTGATCCTGTGTTGCGTCCCATACCTAATTCTTAGTCTTGGACGTTGGAATCTTCTTCGTCCTTCTATGTTAAATCTCTACTAGATGGATTTGGTTAGGGGTGGCTGAGCCACATGTCTTTGACATGTATTCCATTATTTGGAAAGACTTTTATCCAAAGAAGATTAAGCTTTTTCGTTGGAAGCTTAGTCTTGGTTCTGTCAATTTTGCAGACCGTTTACAACATCGTATGCCATAAATCTCTTTCGCCCACTTGGTGTATTATGTGTCAGTGGGATTGGGAATATCCAACTCATCTTTTTGTGCATTGCCCTTTTGCTTCTCTTTTTTGGCACATTGTTTTGGAAGCTTTTGGTTGGTCTTTGAAAGAATCTAATTTTGTCTTTGATATTTTGGCATCTCTTATGATGAGTAATCCATTTGGTGGTACTAAACGATTGATTTGGTTGGCCCTTATGCATGCTTTTTTTTGGACTCTTTGGTGCGAGCACAATGGTCGTGCTTTTAAGGATTCTCTTTCTCCTCTTTTGATAGGTTTATGGATTTGGTTTTGTCTAATGCTTTTTATTAGTGCAAAAATAAGCACTTTTTTAATAATTTCAGTTTATCTTATTTAGTTTCCAATTGGAAAAGTTTCTTGTAATTGCCTATAGGCTGGGTCTTCCTTATTTCATTAATCGATGAAATGTTCCTTATAAAAAAAGATATTGTACCCATTGAAACTAAAAGTTTGAAATCTCTCAACCAGTTGAATCATTTTTTTTCTTATTTTTTATTTGGAATGTGATGGATGCTAGCAGTCTGAAAATGACGAAAAAGAAATCTTGTTTTATGAGCTTTACATTTTGAACAACGTATAAGTGGTGGTTTCTGTGGCAACATTTAGAACGATAGTATTACGTATCTGATCTGCACGCAGAAAAACCCAACAAAGAACTAGGAATTCCAGAAAATAGGGCAAACACCCCCTTTTATTATATATCAACAATCTGGACAAAGCTTCAAGAGTCTTTGAAGGAAAATAACAAGAACATCAACTCACTAAAATGAAAACCCTAGCACATTTGAGAGAGCTAGGAATCCTGTCCAAGAAGACTACTTTTCTTCACAAAACTCTTCACACTAATTCCTTCGATGCAAAACCCTTCTTAAACCCCCCACACGCTCAGGACCAACCCTAGCACTGTGGTCCCCTTCATATGTAGCCTCATTTCCCCTCCATTAACAATTTGTTCCTTCTTTTTTAAACGGAAACAAACTTTTCATTGATATAATGAAAAAAGGCTAGTGCTCCGAGTACACAGAGACATAGGAATTGTACAACTCAAATAGAACTATGGATCAAGAGATACACTGGGCTATCTCAACAAGGTTGCACAACTTTAGCATCCTCATCATATCCCATTATAAAATACAACAAAATACAGCCTTAAGGTGGAACATATAGTTTGTAGTGTCAAAACCAAGCAGTGGCTGTTTTTCCTTGGCTTATCGAATCAATGTATGTCCATTCCTCCTTTGATGACTCCTAGTAGAGAAAGCCTCAATTTGCCGATGTGGATTGAAAGGAAGTTGGGGATAGACATAGATCCCTCTTCCTATCTAGAGTGTTGGATTTCTCGATCATTGAAGCAATCTTCATTGGCACAAGGATCTCCTCACAACAACCTCAACTACAGACAATGAGTTTACGAAAACTTCGAGTAGTGCGAGATAGGCCAATCACTAGACTGCCTTGGAATAGGTTAATTGCCGGAGACAAGAGAATGGAAGGTATCTTTTTCGAGAGAACATAATTTTTCTTGGAGCAGTGAAGAAAGAAGGATGGCAACAAGTGGTTTCAGAAGTTCCCCACCTCTGAGAACAAACGTAGACGATTGTTGGAAGCAGCAACCAAAAAAAAGGAAATTTCAAGTTCTTTTCCTTAGTTAAAGAGGATGTTTCTTTTGCTGATATGGTAAGTAGAAGGAAAGAAGAACAGACTGGCAGTGAGTGCTCGTTGAACCCTTCTGTAGTTAAGGGTAGAAGCTTAACTCTTCCTTTCATGTCATTAACTAGAGTAATACAATTGTGATCACCTGTCAAAACTTCCACAACGATTGGTTTAAGTTGAATGAATCCTTGCAGGAATTGGTTGATGAAAAATGTATGGTGAGCCCCTTTCATCCGGATAAAGCACTTCTGACTTGTCATGATGACACTGTGGTTACCCTCTTAGTGAGGAACAAAGGTTGAGTGGCTATGGGCCCCTTTACATTGAAATTTGAACCATGGAACTATCTTCATCATGGCAGATCTGTGGTTAATGTTTGAAACCTTCTTGATATGTGGTCAGGGGAATACTTCCGTGAAATAGGAAACAAGTTTGGAGGCTTTGTACCGATTGTGTGACCGCCGCCGAACGGATCGTGCAACTGTCTTAACCGTCGATGATCGACCACTATGATTGTCAGTGACTAGTCGCCCTTGATCAACCACAGCTAATGGTAGGTTGCCTATGATCGTCGACAACCACCGTCGGCCAATCAACCGTGCTCATTGGTTGTCGTTGACTTTCTCTCCCTCTCTTTCCTCCTTCCTCCATTTCCCTTTTTTTCTCCTGCTTCCCTTGGATTTCTCATTTCTTTCTCCCCCGTTTTCACAAAAATAAAAAATAAAAATGAAGTCCCTTATTTTTTGAATTGCAACACTAGAGTGTGACATCAATTGTGCTAGTCATAGATCGTTGAACGTTCTTTGTCGCTCGCTGCCCAATGGCGGTCATTGGCCGCGATTGGTTTTTTTCCCCTCTTCTTCCTTTCTCTCCCTTCTTCATTTTCATACACACAAAAAAAGGGTGAAACTTACGAATGGACTAAGAATGCTATTAAATGAAACCTCAAGAGTAAAATCATTTCATGCCAACAAAAAAAAGAGACAAATTAGGAATTTAAAACAAAACCAGATTTGTTATAAATGTGTTAGTAAACTAAATTTCAGTTTTTGCTAAGTTATTAAAAGATAAATTTGTTATAAAGAGAGAGATAAGTTAGAAATTTAAAGCAAAACTAAATTTCTTATAATACGAAATTTTAAAGCTTTGTTACTTTATTACAAAGAACTAAATTTGTTATAAATAATAACTAAATCATTGCTCTTCCTTCCTACATTATTCCTACATTATTGTCATGAAAATTATTAAAGCAAAGGAGTTAATTTAGGATTACAAAAGACATAGCTAATAAAAAATTCAGTTTAAAATGAATAAATTAATGTTATATATCATAAAAATTGATTCATTGTACACGAATATACATTTCACAAAACAACTACTAAAAAAAGGGAAAAAATACAGATCATCCAGACCCAGGCATATATAAACTGCACCCTAAATAGAGGCTTCAGAAACTCAAGCTTTTAAACCTTGCACACCAAACACAGGCATTTGTGATTCTCAAGTTTCAAAATCCCCTAAAATAAGCCCCCAGGCATTAGATTCCGATCCTGCGTGCCAAACGCCTCTAAAAAGGTTCTCTTATCTAGCTTTTACAAGATTCTCTTATCTAGCTTTTCCTATTTATACTTGGGACTTGGGTGTAGAGAATTGGCGAAAAATCAACTAAGAACATCTTGTGGTGTGGTGGCTGGAAAATTTTTATACTTTCTAACATTCACAAGTAGCTAGGCTAGCTCACACCCACTTCAACTTATCTTGCAACACAACCACCCGATTTTACTGAATTTGGTTGTGAAGAAACTCCTAGGATTTTAATATTCTAGGCAAAATCTTCCATATATGCAGCCACCATGGAGTTTCAATCAATTTCCTGAAAGTTCTTTTCAAGTTGTTGCATCAATCCAGGGTTGTTGTATGATAATATATATTTGTTACAATTGTAAATGGTTATTGTGAAAAAATTGGAAATAAGATGTTTAATTTGTGGTGTTGCAACTGCATTTGAAAATGAATTGCACAGATTCAGAAGAAGAAAATATGGGAAATGGTGCAGCCTCATCTGAAGACAGATGCTTGTTGCATTGCTGTGTTGGGTTCCCATCCAATGCGGACCTCCACTGGTGTTGTCACCTCCACATCCCTTAAACACGCAAACATATCTTGACTCGCCCGGGTTACATTGGTACGACACGACACGAATTCACTCTTCCATGTACAAGAAGTAATGAAATGTACAGTACCTTGTAACTTTGTAATGCATTTTTGTAGTGATGCAGTTTTCAAGAAGTTTTTTCAGAAAATTACAAGCACTTAGAAGTAGCATCTAAAGTGCTTTGTGACAAAGCACTTGCTTTTCGGCCCTCATCATACAATCTCAAAGTAATTTTATTCTTTTTACAATAGTCCACGCATGCCCTAAGGCCTAGAATCTAAACAGACATCAGGGGTTTTTCGTTAGTAGGTCTTAACCAGCTCTTCCTTGGAGGCTATATTTATTTATACTAATGTTATTGAATAAATAATATATAATGAATCAACCACTTGAATAATGGGAGAAAATATCT

mRNA sequence

CCAAAATGGGTCAACAATAGAGCAATTTCCCTTTTTTGTCATCCACAGTTCCCAAACAGTGTGGGGGCAAAAACCATCTCGATATCGACTAGTATTCCCAATCACCCCCAACGATGGCTTCTCTACCAACGGCCGCTGCAATTGCCAATGTTACAAAAAGTGCCAGCAATCGCCGCTTCTTCTTCTTCTCCTCTTCCCTTGCCCATAACTTCAACCATTATCGCCCGTTCTTCGCTGTACGTCCAACTTTTTCTAGTTTTACCCCACCACTTGGTAAGGATAATGTCGCTACCAGGGGAAGAATCTCCAGAAATGGTGCGCGGTTTCCCTTCTCATTTTGCACTACCGCATCCACCGAGTCTGTCACCAGTGACGCTGCCATTGCATCGTCTTCCACATCATTGGATAAGGACGATGATCCGGAAAAGAAGATTAAGGATGCGGCCGACACGCTCGATATTAGGGTTGGGCGAATCATTAAGGCTTGGAGACATCAGGAGGCTGACTCTCTTTATGTAGAAGAGGTTGACGTTGGTGAACCCGAGCCGAGGCTTATTTGCAGTGGCCTTGTTAAATATATCCCTCTTGATCAACTTCAGGATAGAAGAGTCATTGTCCTCACAAATTTGAAGCCAAGAAATATGCGGGGCATCAAGTCTTGTGGAATGCTAATGGCTGCTTCTGATTCTTTGCACGAGAACGTTGAACTTCTTTTGCCCCCTGAGGGTTCGATTCCAGGTGAAAGAATATGGTTTGGATCCGAAGATGAAAAAGGCAACCAACCTGATGCTGCTACCCCCAACCAGGCCATTGGGGGTTACTTCGGTGACGTCGTCGAGGATGAGATCGCCGGAGATGAAGCCATTGAAGCAATCTTCATTGGCACAAGGATCTCCTCACAACAACCTCAACTACAGACAATGAGTTTACGAAAACTTCGAGTAGTGCGAGATAGGCCAATCACTAGACTGCCTTGGAATAGGTTAATTGCCGGAGACAAGAGAATGGAAGTTAAAGAGGATGTTTCTTTTGCTGATATGAGTAATACAATTGTGATCACCTGTCAAAACTTCCACAACGATTGGTTTAAGTTGAATGAATCCTTGCAGGAATTGGTTGATGAAAAATGTATGATTCAGAAGAAGAAAATATGGGAAATGGTGCAGCCTCATCTGAAGACAGATGCTTGTTGCATTGCTGTGTTGGGTTCCCATCCAATGCGGACCTCCACTGGTGTTGTCACCTCCACATCCCTTAAACACGCAAACATATCTTGACTCGCCCGGGTTACATTGGTACGACACGACACGAATTCACTCTTCCATGTACAAGAAGTAATGAAATGTACAGTACCTTGTAACTTTGTAATGCATTTTTGTAGTGATGCAGTTTTCAAGAAGTTTTTTCAGAAAATTACAAGCACTTAGAAGTAGCATCTAAAGTGCTTTGTGACAAAGCACTTGCTTTTCGGCCCTCATCATACAATCTCAAAGTAATTTTATTCTTTTTACAATAGTCCACGCATGCCCTAAGGCCTAGAATCTAAACAGACATCAGGGGTTTTTCGTTAGTAGGTCTTAACCAGCTCTTCCTTGGAGGCTATATTTATTTATACTAATGTTATTGAATAAATAATATATAATGAATCAACCACTTGAATAATGGGAGAAAATATCT

Coding sequence (CDS)

ATGGCTTCTCTACCAACGGCCGCTGCAATTGCCAATGTTACAAAAAGTGCCAGCAATCGCCGCTTCTTCTTCTTCTCCTCTTCCCTTGCCCATAACTTCAACCATTATCGCCCGTTCTTCGCTGTACGTCCAACTTTTTCTAGTTTTACCCCACCACTTGGTAAGGATAATGTCGCTACCAGGGGAAGAATCTCCAGAAATGGTGCGCGGTTTCCCTTCTCATTTTGCACTACCGCATCCACCGAGTCTGTCACCAGTGACGCTGCCATTGCATCGTCTTCCACATCATTGGATAAGGACGATGATCCGGAAAAGAAGATTAAGGATGCGGCCGACACGCTCGATATTAGGGTTGGGCGAATCATTAAGGCTTGGAGACATCAGGAGGCTGACTCTCTTTATGTAGAAGAGGTTGACGTTGGTGAACCCGAGCCGAGGCTTATTTGCAGTGGCCTTGTTAAATATATCCCTCTTGATCAACTTCAGGATAGAAGAGTCATTGTCCTCACAAATTTGAAGCCAAGAAATATGCGGGGCATCAAGTCTTGTGGAATGCTAATGGCTGCTTCTGATTCTTTGCACGAGAACGTTGAACTTCTTTTGCCCCCTGAGGGTTCGATTCCAGGTGAAAGAATATGGTTTGGATCCGAAGATGAAAAAGGCAACCAACCTGATGCTGCTACCCCCAACCAGGCCATTGGGGGTTACTTCGGTGACGTCGTCGAGGATGAGATCGCCGGAGATGAAGCCATTGAAGCAATCTTCATTGGCACAAGGATCTCCTCACAACAACCTCAACTACAGACAATGAGTTTACGAAAACTTCGAGTAGTGCGAGATAGGCCAATCACTAGACTGCCTTGGAATAGGTTAATTGCCGGAGACAAGAGAATGGAAGTTAAAGAGGATGTTTCTTTTGCTGATATGAGTAATACAATTGTGATCACCTGTCAAAACTTCCACAACGATTGGTTTAAGTTGAATGAATCCTTGCAGGAATTGGTTGATGAAAAATGTATGATTCAGAAGAAGAAAATATGGGAAATGGTGCAGCCTCATCTGAAGACAGATGCTTGTTGCATTGCTGTGTTGGGTTCCCATCCAATGCGGACCTCCACTGGTGTTGTCACCTCCACATCCCTTAAACACGCAAACATATCTTGA

Protein sequence

MASLPTAAAIANVTKSASNRRFFFFSSSLAHNFNHYRPFFAVRPTFSSFTPPLGKDNVATRGRISRNGARFPFSFCTTASTESVTSDAAIASSSTSLDKDDDPEKKIKDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQAIGGYFGDVVEDEIAGDEAIEAIFIGTRISSQQPQLQTMSLRKLRVVRDRPITRLPWNRLIAGDKRMEVKEDVSFADMSNTIVITCQNFHNDWFKLNESLQELVDEKCMIQKKKIWEMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKHANIS

Homology

[Close]

BLAST of ClCG04G002910.2 vs. NCBI nr
Match: XP_008449535.1 (PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 426.4 bits (1095), Expect = 2.6e-115
Identity = 246/389 (63.24%), Postives = 258/389 (66.32%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKSASNRR-FFFFSSSLAHNFNHYRPFFAVRPTFSSFTPPLGKDNVA 60
           MASLPTAAAIANV K+A+N R FFFFSSSL+HNF+H  PFFA+  TFS FTP L KDNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  TRGRISRNGARFPFSFCTTASTESVTSDAAIASSSTSLDK-DDDPEKKIKDAADTLDIRV 120
             GRISRNG RFPFSFCTTASTE VTSDA+IASSSTS+DK DDDPEK IK+AAD LDIRV
Sbjct: 61  --GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRV 120

Query: 121 GRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLKPRNMR 180
           GRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRV+VL NLKPRNMR
Sbjct: 121 GRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMR 180

Query: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQAIGGYFG 240
           GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA+PNQ       
Sbjct: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAASPNQ------- 240

Query: 241 DVVEDEIAGDEAIEAIFIGTRISSQQPQLQTMSLRKLRVVRDRPITRLPWNRLIAGDKRM 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 278

Query: 301 EVKEDVSFADMSNTIVITCQNFHNDWFKLNESLQELVDEKCMIQKKKIWEMVQPHLKTDA 360
                                                     IQKKKIWEMVQPHLKTD 
Sbjct: 301 ------------------------------------------IQKKKIWEMVQPHLKTDG 278

Query: 361 CCIAVLGSHPMRTSTGVVTSTSLKHANIS 388
           CC AVLGSHP+RTSTGVVTSTSLKHANIS
Sbjct: 361 CCTAVLGSHPLRTSTGVVTSTSLKHANIS 278

[Close]

BLAST of ClCG04G002910.2 vs. NCBI nr
Match: XP_038882664.1 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Benincasa hispida])

HSP 1 Score: 425.6 bits (1093), Expect = 4.5e-115
Identity = 250/397 (62.97%), Postives = 258/397 (64.99%), Query Frame = 0


Query: 1   MASLPT-AAAIANVTKSASNRRFFFFSSSLAHNFNHYRPFFAVRPTFSSFTPPLGKDNVA 60
           MASLPT AAAIANVTK+A+N RFF FSSSL+HNF+H RPFFA+R TFS FTPPL KDNVA
Sbjct: 1   MASLPTAAAAIANVTKTATNARFFLFSSSLSHNFDHDRPFFALRRTFSRFTPPLPKDNVA 60

Query: 61  T----RGRISRNGARFPFSFCTTASTESVTSDAAIASSSTSLDK-----DDDPEKKIKDA 120
           +    RGRISRNG RF  SFCTT STE VTSDA IASSSTSLDK     DDD EKKIKDA
Sbjct: 61  SIERRRGRISRNGGRFSPSFCTTGSTEPVTSDAVIASSSTSLDKDGGHDDDDLEKKIKDA 120

Query: 121 ADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLT 180
           A TLDIRVG+IIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRVIVLT
Sbjct: 121 AGTLDIRVGQIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLT 180

Query: 181 NLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPN 240
           NLKPRNMRGIKSCGMLMAASDSLHEN+ELLLP EGS PGERIWFGSEDEKGNQPDAATPN
Sbjct: 181 NLKPRNMRGIKSCGMLMAASDSLHENIELLLPHEGSFPGERIWFGSEDEKGNQPDAATPN 240

Query: 241 QAIGGYFGDVVEDEIAGDEAIEAIFIGTRISSQQPQLQTMSLRKLRVVRDRPITRLPWNR 300
           Q                                                           
Sbjct: 241 Q----------------------------------------------------------- 288

Query: 301 LIAGDKRMEVKEDVSFADMSNTIVITCQNFHNDWFKLNESLQELVDEKCMIQKKKIWEMV 360
                                                             IQKKKIWEMV
Sbjct: 301 --------------------------------------------------IQKKKIWEMV 288

Query: 361 QPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKHANIS 388
           QPHLKTD CC AVLGSHPMRTSTGVVTS SLKHANIS
Sbjct: 361 QPHLKTDGCCTAVLGSHPMRTSTGVVTSPSLKHANIS 288

[Close]

BLAST of ClCG04G002910.2 vs. NCBI nr
Match: XP_004144343.1 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 423.3 bits (1087), Expect = 2.2e-114
Identity = 246/389 (63.24%), Postives = 253/389 (65.04%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKSASNRR-FFFFSSSLAHNFNHYRPFFAVRPTFSSFTPPLGKDNVA 60
           MASLPTAA IANV K+A+N R FFFFSSSL+HNF+HY P FA   TFS FTPPL  DNVA
Sbjct: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60

Query: 61  TRGRISRNGARFPFSFCTTASTESVTSDAAIASSSTSLDK-DDDPEKKIKDAADTLDIRV 120
             GRISRNG +FPFSFCTTASTE VTSDA+IA SSTSLDK DDDPEK IKDAAD LDIRV
Sbjct: 61  --GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRV 120

Query: 121 GRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLKPRNMR 180
           GRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRVIVL NLKPRNMR
Sbjct: 121 GRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMR 180

Query: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQAIGGYFG 240
           GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA PNQ       
Sbjct: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQ------- 240

Query: 241 DVVEDEIAGDEAIEAIFIGTRISSQQPQLQTMSLRKLRVVRDRPITRLPWNRLIAGDKRM 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 278

Query: 301 EVKEDVSFADMSNTIVITCQNFHNDWFKLNESLQELVDEKCMIQKKKIWEMVQPHLKTDA 360
                                                     IQKKKIWEMVQPHLKTD 
Sbjct: 301 ------------------------------------------IQKKKIWEMVQPHLKTDG 278

Query: 361 CCIAVLGSHPMRTSTGVVTSTSLKHANIS 388
           CC AVLGSHPMRTS GVVTSTSLKHANIS
Sbjct: 361 CCTAVLGSHPMRTSAGVVTSTSLKHANIS 278

[Close]

BLAST of ClCG04G002910.2 vs. NCBI nr
Match: KAG6595713.1 (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 410.6 bits (1054), Expect = 1.5e-110
Identity = 242/400 (60.50%), Postives = 253/400 (63.25%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKSASNRRFFF----FSSSLAHNFNHYRPFFAVRPTFSSFTPPLGKD 60
           MASLPTAAAIANVTK+A+NRRF F    FSSSL+H F H RPFFA+RPTF  FTPPL KD
Sbjct: 3   MASLPTAAAIANVTKTATNRRFLFFSSSFSSSLSHKFAHSRPFFALRPTFPCFTPPLHKD 62

Query: 61  NVA----TRGRISRNGARFPFSFCTTASTESVTSDAAIASSSTSLDKD-----DDPEKKI 120
            VA    TRGRISRNGARFPFSFCT +STE  TSDA IASSS+S DKD     DDPEKKI
Sbjct: 63  KVASIQETRGRISRNGARFPFSFCTVSSTEPATSDAPIASSSSSSDKDDGNDNDDPEKKI 122

Query: 121 KDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVI 180
           KDAAD LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRV+
Sbjct: 123 KDAADMLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVV 182

Query: 181 VLTNLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA 240
           VL NLKPRNMRGIKS GMLMAASDSLHENVELLLPPE SIPGERIWFGS+D+K  QPDAA
Sbjct: 183 VLANLKPRNMRGIKSFGMLMAASDSLHENVELLLPPEDSIPGERIWFGSQDDKEKQPDAA 242

Query: 241 TPNQAIGGYFGDVVEDEIAGDEAIEAIFIGTRISSQQPQLQTMSLRKLRVVRDRPITRLP 300
           T NQ                                                        
Sbjct: 243 TANQ-------------------------------------------------------- 293

Query: 301 WNRLIAGDKRMEVKEDVSFADMSNTIVITCQNFHNDWFKLNESLQELVDEKCMIQKKKIW 360
                                                                IQKKKIW
Sbjct: 303 -----------------------------------------------------IQKKKIW 293

Query: 361 EMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKHANIS 388
           EMVQPHLKTDA C AVLG HPMRTS G+VT+TSLKHANIS
Sbjct: 363 EMVQPHLKTDASCTAVLGPHPMRTSAGLVTTTSLKHANIS 293

[Close]

BLAST of ClCG04G002910.2 vs. NCBI nr
Match: KAG7027675.1 (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 410.6 bits (1054), Expect = 1.5e-110
Identity = 242/400 (60.50%), Postives = 253/400 (63.25%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKSASNRRFFF----FSSSLAHNFNHYRPFFAVRPTFSSFTPPLGKD 60
           MASLPTAAAIANVTK+A+NRRF F    FSSSL+H F H RPFFA+RPTF  FTPPL KD
Sbjct: 1   MASLPTAAAIANVTKTATNRRFLFFSSSFSSSLSHKFAHSRPFFALRPTFPCFTPPLHKD 60

Query: 61  NVA----TRGRISRNGARFPFSFCTTASTESVTSDAAIASSSTSLDKD-----DDPEKKI 120
            VA    TRGRISRNGARFPFSFCT +STE  TSDA IASSS+S DKD     DDPEKKI
Sbjct: 61  KVASIQETRGRISRNGARFPFSFCTVSSTEPATSDAPIASSSSSSDKDDGNDNDDPEKKI 120

Query: 121 KDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVI 180
           KDAAD LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRV+
Sbjct: 121 KDAADMLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVV 180

Query: 181 VLTNLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA 240
           VL NLKPRNMRGIKS GMLMAASDSLHENVELLLPPE SIPGERIWFGS+D+K  QPDAA
Sbjct: 181 VLANLKPRNMRGIKSFGMLMAASDSLHENVELLLPPEDSIPGERIWFGSQDDKEKQPDAA 240

Query: 241 TPNQAIGGYFGDVVEDEIAGDEAIEAIFIGTRISSQQPQLQTMSLRKLRVVRDRPITRLP 300
           T NQ                                                        
Sbjct: 241 TANQ-------------------------------------------------------- 291

Query: 301 WNRLIAGDKRMEVKEDVSFADMSNTIVITCQNFHNDWFKLNESLQELVDEKCMIQKKKIW 360
                                                                IQKKKIW
Sbjct: 301 -----------------------------------------------------IQKKKIW 291

Query: 361 EMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKHANIS 388
           EMVQPHLKTDA C AVLG HPMRTS G+VT+TSLKHANIS
Sbjct: 361 EMVQPHLKTDASCTAVLGPHPMRTSAGLVTTTSLKHANIS 291

[Close]

BLAST of ClCG04G002910.2 vs. ExPASy Swiss-Prot
Match: O54873 (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cricetulus griseus OX=10029 GN=AIMP1 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.9e-29
Identity = 76/167 (45.51%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 99  KDDDPEKKIKDAADT----------LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLI 158
           K +  EKK++ AA +          LD+R+GRI+   +H +ADSLYVEEVDVGE  PR +
Sbjct: 177 KGEKKEKKLQSAAPSADSKPVDVSRLDLRIGRIVTVKKHPDADSLYVEEVDVGEAAPRTV 236

Query: 159 CSGLVKYIPLDQLQDRRVIVLTNLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIP 218
            SGLV ++PLDQ+Q+R V++L NLKP  MRGI S  M+M AS    E VE+L PP GS+P
Sbjct: 237 ISGLVNHVPLDQMQNRMVVLLCNLKPAKMRGILSQAMVMCASSP--EKVEILAPPNGSVP 296

Query: 219 GERIWF----GSEDEKGN---------QPDAATPNQAIGGYFGDVVE 243
           G+RI F    G  D++ N         QPD  T  + +  Y G   E
Sbjct: 297 GDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNAECVATYKGSPFE 341

[Close]

BLAST of ClCG04G002910.2 vs. ExPASy Swiss-Prot
Match: Q29465 (Tyrosine--tRNA ligase, cytoplasmic OS=Bos taurus OX=9913 GN=YARS1 PE=2 SV=4)

HSP 1 Score: 129.0 bits (323), Expect = 1.1e-28
Identity = 68/136 (50.00%), Postives = 94/136 (69.12%), Query Frame = 0


Query: 99  KDDDPEKKIKDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPL 158
           K+ +PE+ I      LDIRVG++I   +H +ADSLYVE++DVGE EPR + SGLV+++P 
Sbjct: 356 KNSEPEEVI---PSRLDIRVGKVISVDKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPK 415

Query: 159 DQLQDRRVIVLTNLKPRNMRGIKSCGMLMAAS-DSLHENVELLLPPEGSIPGERIWFGSE 218
           ++LQDR V+VL NLKP+ MRG+KS GML+ AS + ++  VE L PP GS PGER+ F   
Sbjct: 416 EELQDRLVVVLCNLKPQKMRGVKSQGMLLCASVEGVNRKVEPLDPPAGSAPGERV-FVKG 475

Query: 219 DEKGNQPDAATPNQAI 234
            EKG   +   P + +
Sbjct: 476 YEKGQPDEELKPKKKV 487

[Close]

BLAST of ClCG04G002910.2 vs. ExPASy Swiss-Prot
Match: Q5R8T5 (Tyrosine--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=YARS1 PE=2 SV=3)

HSP 1 Score: 128.3 bits (321), Expect = 1.9e-28
Identity = 68/136 (50.00%), Postives = 94/136 (69.12%), Query Frame = 0


Query: 99  KDDDPEKKIKDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPL 158
           K+ +PE+ I      LDIRVG+II   +H +ADSLYVE++DVGE EPR + SGLV+++P 
Sbjct: 356 KNSEPEEVI---PSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPK 415

Query: 159 DQLQDRRVIVLTNLKPRNMRGIKSCGMLMAAS-DSLHENVELLLPPEGSIPGERIWFGSE 218
           ++LQDR V+VL NLKP+ MRG++S GML+ AS + ++  VE L PP GS PGER+ F   
Sbjct: 416 EELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGERV-FVKG 475

Query: 219 DEKGNQPDAATPNQAI 234
            EKG   +   P + +
Sbjct: 476 YEKGQPDEELKPKKKV 487

[Close]

BLAST of ClCG04G002910.2 vs. ExPASy Swiss-Prot
Match: P54577 (Tyrosine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=YARS1 PE=1 SV=4)

HSP 1 Score: 126.3 bits (316), Expect = 7.4e-28
Identity = 67/136 (49.26%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 99  KDDDPEKKIKDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPL 158
           K+ +PE+ I      LDIRVG+II   +H +ADSLYVE++DVGE EPR + SGLV+++P 
Sbjct: 356 KNSEPEEVI---PSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPK 415

Query: 159 DQLQDRRVIVLTNLKPRNMRGIKSCGMLMAAS-DSLHENVELLLPPEGSIPGERIWFGSE 218
           ++LQDR V+VL NLKP+ MRG++S GML+ AS + ++  VE L PP GS PGE + F   
Sbjct: 416 EELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHV-FVKG 475

Query: 219 DEKGNQPDAATPNQAI 234
            EKG   +   P + +
Sbjct: 476 YEKGQPDEELKPKKKV 487

[Close]

BLAST of ClCG04G002910.2 vs. ExPASy Swiss-Prot
Match: Q91WQ3 (Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3)

HSP 1 Score: 125.9 bits (315), Expect = 9.6e-28
Identity = 67/136 (49.26%), Postives = 92/136 (67.65%), Query Frame = 0


Query: 99  KDDDPEKKIKDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPL 158
           K+ +PE+ I      LDIRVG+I+   +H +ADSLYVE++DVGE EPR + SGLV+++P 
Sbjct: 356 KNSEPEEVI---PSRLDIRVGKILSVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPK 415

Query: 159 DQLQDRRVIVLTNLKPRNMRGIKSCGMLMAAS-DSLHENVELLLPPEGSIPGERIWFGSE 218
           ++LQDR V+VL NLKP+ MRG+ S GML+ AS + +   VE L PP GS PGER+ F   
Sbjct: 416 EELQDRLVVVLCNLKPQKMRGVDSQGMLLCASVEGVSRQVEPLDPPAGSAPGERV-FVQG 475

Query: 219 DEKGNQPDAATPNQAI 234
            EKG   +   P + +
Sbjct: 476 YEKGQPDEELKPKKKV 487

[Close]

BLAST of ClCG04G002910.2 vs. ExPASy TrEMBL
Match: A0A1S3BN57 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491385 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 1.3e-115
Identity = 246/389 (63.24%), Postives = 258/389 (66.32%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKSASNRR-FFFFSSSLAHNFNHYRPFFAVRPTFSSFTPPLGKDNVA 60
           MASLPTAAAIANV K+A+N R FFFFSSSL+HNF+H  PFFA+  TFS FTP L KDNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  TRGRISRNGARFPFSFCTTASTESVTSDAAIASSSTSLDK-DDDPEKKIKDAADTLDIRV 120
             GRISRNG RFPFSFCTTASTE VTSDA+IASSSTS+DK DDDPEK IK+AAD LDIRV
Sbjct: 61  --GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRV 120

Query: 121 GRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLKPRNMR 180
           GRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRV+VL NLKPRNMR
Sbjct: 121 GRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMR 180

Query: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQAIGGYFG 240
           GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA+PNQ       
Sbjct: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAASPNQ------- 240

Query: 241 DVVEDEIAGDEAIEAIFIGTRISSQQPQLQTMSLRKLRVVRDRPITRLPWNRLIAGDKRM 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 278

Query: 301 EVKEDVSFADMSNTIVITCQNFHNDWFKLNESLQELVDEKCMIQKKKIWEMVQPHLKTDA 360
                                                     IQKKKIWEMVQPHLKTD 
Sbjct: 301 ------------------------------------------IQKKKIWEMVQPHLKTDG 278

Query: 361 CCIAVLGSHPMRTSTGVVTSTSLKHANIS 388
           CC AVLGSHP+RTSTGVVTSTSLKHANIS
Sbjct: 361 CCTAVLGSHPLRTSTGVVTSTSLKHANIS 278

[Close]

BLAST of ClCG04G002910.2 vs. ExPASy TrEMBL
Match: A0A0A0L299 (tRNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G438550 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.1e-114
Identity = 246/389 (63.24%), Postives = 253/389 (65.04%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKSASNRR-FFFFSSSLAHNFNHYRPFFAVRPTFSSFTPPLGKDNVA 60
           MASLPTAA IANV K+A+N R FFFFSSSL+HNF+HY P FA   TFS FTPPL  DNVA
Sbjct: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60

Query: 61  TRGRISRNGARFPFSFCTTASTESVTSDAAIASSSTSLDK-DDDPEKKIKDAADTLDIRV 120
             GRISRNG +FPFSFCTTASTE VTSDA+IA SSTSLDK DDDPEK IKDAAD LDIRV
Sbjct: 61  --GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRV 120

Query: 121 GRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLKPRNMR 180
           GRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRVIVL NLKPRNMR
Sbjct: 121 GRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMR 180

Query: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQAIGGYFG 240
           GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA PNQ       
Sbjct: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQ------- 240

Query: 241 DVVEDEIAGDEAIEAIFIGTRISSQQPQLQTMSLRKLRVVRDRPITRLPWNRLIAGDKRM 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 278

Query: 301 EVKEDVSFADMSNTIVITCQNFHNDWFKLNESLQELVDEKCMIQKKKIWEMVQPHLKTDA 360
                                                     IQKKKIWEMVQPHLKTD 
Sbjct: 301 ------------------------------------------IQKKKIWEMVQPHLKTDG 278

Query: 361 CCIAVLGSHPMRTSTGVVTSTSLKHANIS 388
           CC AVLGSHPMRTS GVVTSTSLKHANIS
Sbjct: 361 CCTAVLGSHPMRTSAGVVTSTSLKHANIS 278

[Close]

BLAST of ClCG04G002910.2 vs. ExPASy TrEMBL
Match: A0A6J1EB98 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111432547 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 2.0e-108
Identity = 239/400 (59.75%), Postives = 250/400 (62.50%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKSASNRRFFF----FSSSLAHNFNHYRPFFAVRPTFSSFTPPLGKD 60
           MASLPTAAAIANVTK+A+NRR  F    FSSSL+H F H RPFFA+RPTF  FTPPL KD
Sbjct: 3   MASLPTAAAIANVTKTATNRRLLFFSSSFSSSLSHKFGHSRPFFALRPTFPCFTPPLHKD 62

Query: 61  NVA----TRGRISRNGARFPFSFCTTASTESVTSDAAIASSSTSLDKD-----DDPEKKI 120
            VA    TRGRISRNGARFPFSFCT +STE  TSDA IASSS+S DKD     DDPEKKI
Sbjct: 63  KVASIQETRGRISRNGARFPFSFCTASSTEPATSDAPIASSSSSSDKDDGNDNDDPEKKI 122

Query: 121 KDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVI 180
           KDAAD LDIRVGRIIKAWRH EADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRV+
Sbjct: 123 KDAADMLDIRVGRIIKAWRHHEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVV 182

Query: 181 VLTNLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA 240
           VL NLKPRNMRGIKS GMLMAASDSLHENVELLLPPE SIPGERIWFGS+D+K  QPDAA
Sbjct: 183 VLANLKPRNMRGIKSFGMLMAASDSLHENVELLLPPEDSIPGERIWFGSQDDKEKQPDAA 242

Query: 241 TPNQAIGGYFGDVVEDEIAGDEAIEAIFIGTRISSQQPQLQTMSLRKLRVVRDRPITRLP 300
           T NQ                                                        
Sbjct: 243 TANQ-------------------------------------------------------- 293

Query: 301 WNRLIAGDKRMEVKEDVSFADMSNTIVITCQNFHNDWFKLNESLQELVDEKCMIQKKKIW 360
                                                                IQKKKIW
Sbjct: 303 -----------------------------------------------------IQKKKIW 293

Query: 361 EMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKHANIS 388
           EMVQPHLKTDA   AVLG HPMRTS G+VT+TSLKHANIS
Sbjct: 363 EMVQPHLKTDASRTAVLGPHPMRTSAGLVTTTSLKHANIS 293

[Close]

BLAST of ClCG04G002910.2 vs. ExPASy TrEMBL
Match: A0A6J1HP94 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111466069 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 7.5e-108
Identity = 238/400 (59.50%), Postives = 249/400 (62.25%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKSASNRRFFF----FSSSLAHNFNHYRPFFAVRPTFSSFTPPLGKD 60
           MASLPTAAAIANVTK+A+N R  F    FSSSL H F+H RPFFA+R TF  FTPPL KD
Sbjct: 3   MASLPTAAAIANVTKTATNGRLLFFSSSFSSSLPHKFDHSRPFFALRRTFPCFTPPLHKD 62

Query: 61  NVA----TRGRISRNGARFPFSFCTTASTESVTSDAAIASSSTSLDKD-----DDPEKKI 120
            VA    TRGRISRNGARFPFSFCT +STE  TS A IASSS+S DKD     DDPEKKI
Sbjct: 63  KVASIQETRGRISRNGARFPFSFCTASSTEPATSGAPIASSSSSSDKDDGNDNDDPEKKI 122

Query: 121 KDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVI 180
           KDAAD LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRV+
Sbjct: 123 KDAADMLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVV 182

Query: 181 VLTNLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA 240
           VL NLKPRNMRGIKS GMLMAASDS+HENVELLLPPE SIPGERIWFGSED+K  QPDAA
Sbjct: 183 VLANLKPRNMRGIKSSGMLMAASDSMHENVELLLPPEDSIPGERIWFGSEDDKEKQPDAA 242

Query: 241 TPNQAIGGYFGDVVEDEIAGDEAIEAIFIGTRISSQQPQLQTMSLRKLRVVRDRPITRLP 300
           T NQ                                                        
Sbjct: 243 TANQ-------------------------------------------------------- 293

Query: 301 WNRLIAGDKRMEVKEDVSFADMSNTIVITCQNFHNDWFKLNESLQELVDEKCMIQKKKIW 360
                                                                IQKKKIW
Sbjct: 303 -----------------------------------------------------IQKKKIW 293

Query: 361 EMVQPHLKTDACCIAVLGSHPMRTSTGVVTSTSLKHANIS 388
           EMVQPHLKTDA C AVLG HPMRTS G+VT+TSLKHANIS
Sbjct: 363 EMVQPHLKTDASCTAVLGPHPMRTSAGLVTTTSLKHANIS 293

[Close]

BLAST of ClCG04G002910.2 vs. ExPASy TrEMBL
Match: A0A5A7V9V7 (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001020 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 7.2e-103
Identity = 202/233 (86.70%), Postives = 213/233 (91.42%), Query Frame = 0


Query: 1   MASLPTAAAIANVTKSASNRR-FFFFSSSLAHNFNHYRPFFAVRPTFSSFTPPLGKDNVA 60
           MASLPTAAAIANV K+A+N R FFFFSSSL+HNF+H  PFFA+  TFS FTP L KDNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  TRGRISRNGARFPFSFCTTASTESVTSDAAIASSSTSLDK-DDDPEKKIKDAADTLDIRV 120
             GRISRNG RFPFSFCTTASTE VTSDA+IASSSTS+DK DDDPEK IK+AAD LDIRV
Sbjct: 61  --GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRV 120

Query: 121 GRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLKPRNMR 180
           GRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQL DRRV+VL NLKPRNMR
Sbjct: 121 GRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMR 180

Query: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQ 232
           GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA+PNQ
Sbjct: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAASPNQ 231

[Close]

BLAST of ClCG04G002910.2 vs. TAIR 10
Match: AT3G59980.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-55
Identity = 128/324 (39.51%), Postives = 168/324 (51.85%), Query Frame = 0


Query: 66  RNGARFP--FSFCTTASTESVTSDAAIASSSTSLDKDDDPEKKIKDAADTLDIRVGRIIK 125
           RN + +P   +FCT A     T  A  +   +   K+   E+ +K+ A+ LDI+VGRI+K
Sbjct: 62  RNRSSWPRVATFCTAAPDAGTTVSADESEKKSESQKE---EENVKETANLLDIKVGRIVK 121

Query: 126 AWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTNLKPRNMRGIKSC 185
           AW+H+EADSLYVEEVD+GE EPR+ICSGLVKY+PLD LQ   V+VL NLKPRNMRG+KSC
Sbjct: 122 AWQHEEADSLYVEEVDIGEAEPRIICSGLVKYVPLDLLQGASVVVLANLKPRNMRGVKSC 181

Query: 186 GMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQAIGGYFGDVVED 245
           GML+AASD+ HENVELL+PPEGS+PG+R+WFG+E++    P+ A PN+            
Sbjct: 182 GMLLAASDAAHENVELLVPPEGSVPGDRVWFGNEEDLEQLPEPAPPNK------------ 241

Query: 246 EIAGDEAIEAIFIGTRISSQQPQLQTMSLRKLRVVRDRPITRLPWNRLIAGDKRMEVKED 305
                                                                       
Sbjct: 242 ------------------------------------------------------------ 273

Query: 306 VSFADMSNTIVITCQNFHNDWFKLNESLQELVDEKCMIQKKKIWEMVQPHLKTDACCIAV 365
                                                +QKKK+WE+VQP LKTDA  +++
Sbjct: 302 -------------------------------------VQKKKMWELVQPLLKTDASGVSM 273

Query: 366 LGSHPMRTSTGVVTSTSLKHANIS 388
           L  H MRTS+G+VTS SL++ANIS
Sbjct: 362 LKEHLMRTSSGLVTSKSLRNANIS 273

[Close]

BLAST of ClCG04G002910.2 vs. TAIR 10
Match: AT4G13780.1 (methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative )

HSP 1 Score: 109.8 bits (273), Expect = 5.1e-24
Identity = 74/182 (40.66%), Postives = 101/182 (55.49%), Query Frame = 0


Query: 69  ARFPFSFCTTASTESVTSDAAIASSSTSLDKDDDPEK-----------KIKDAAD----- 128
           AR+   F  + S      +AA  +   +  K  D +K           K + AAD     
Sbjct: 577 ARYREKFAGSQSDRRARDEAANLADQLNKTKLSDAKKQKASSKGGGKPKPQPAADREITM 636

Query: 129 -TLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLQDRRVIVLTN 188
             LDIRVG+I+KA +H +AD+LYVEE+DVG  E R + SGLVKYIPL+++Q+R V VL N
Sbjct: 637 ARLDIRVGKIVKAEKHPKADALYVEEIDVGGGEIRTVVSGLVKYIPLEEMQNRMVCVLCN 696

Query: 189 LKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQ 234
           LKP  MR I S  M++AAS S    VEL+ PP+ +  GER+ F   +  G   D   P +
Sbjct: 697 LKPAKMRDIVSQAMVLAASSSDGSKVELVEPPKTANIGERVTFPGFE--GEPDDVLNPKK 756

[Close]

BLAST of ClCG04G002910.2 vs. TAIR 10
Match: AT2G40660.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 104.4 bits (259), Expect = 2.1e-22
Identity = 58/136 (42.65%), Postives = 81/136 (59.56%), Query Frame = 0


Query: 99  KDDDPEKKIKDA---ADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKY 158
           K  +PE   K+A      L+I+VG I KAW+H  ADSL VEE+DVGE + R + SGL K+
Sbjct: 214 KPAEPEPAKKEAELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEDKVRQVVSGLAKF 273

Query: 159 IPLDQLQDRRVIVLTNLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFG 218
              + L +R V ++TN+KP  +R + S G+++ AS   H  VE LLPP G+ PGER+ F 
Sbjct: 274 CSPEDLTNRLVALITNVKPGKLRDVMSQGLVLCASSEDHSVVEPLLPPAGAKPGERVSFS 333

Query: 219 SEDEKGNQPDAATPNQ 232
             +  G   D   P +
Sbjct: 334 GIE--GKPEDVLNPKK 347

The following BLAST results are available for this feature:

BLAST of ClCG04G002910.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449535.1	2.6e-115	63.24	PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1...	[more]
XP_038882664.1	4.5e-115	62.97	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Benincasa...	[more]
XP_004144343.1	2.2e-114	63.24	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1...	[more]
KAG6595713.1	1.5e-110	60.50	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, partial [...	[more]
KAG7027675.1	1.5e-110	60.50	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, partial [...	[more]

BLAST of ClCG04G002910.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O54873	3.9e-29	45.51	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cricetu...	[more]
Q29465	1.1e-28	50.00	Tyrosine--tRNA ligase, cytoplasmic OS=Bos taurus OX=9913 GN=YARS1 PE=2 SV=4	[more]
Q5R8T5	1.9e-28	50.00	Tyrosine--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=YARS1 PE=2 SV=3	[more]
P54577	7.4e-28	49.26	Tyrosine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=YARS1 PE=1 SV=4	[more]
Q91WQ3	9.6e-28	49.26	Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3	[more]

BLAST of ClCG04G002910.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BN57	1.3e-115	63.24	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1...	[more]
A0A0A0L299	1.1e-114	63.24	tRNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G43855...	[more]
A0A6J1EB98	2.0e-108	59.75	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cucurbi...	[more]
A0A6J1HP94	7.5e-108	59.50	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cucurbi...	[more]
A0A5A7V9V7	7.2e-103	86.70	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2...	[more]

BLAST of ClCG04G002910.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59980.1	1.1e-55	39.51	Nucleic acid-binding, OB-fold-like protein	[more]
AT4G13780.1	5.1e-24	40.66	methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS,...	[more]
AT2G40660.1	2.1e-22	42.65	Nucleic acid-binding, OB-fold-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002547	tRNA-binding domain	PFAM	PF01588	tRNA_bind	coord: 116..210 e-value: 1.0E-26 score: 92.8
IPR002547	tRNA-binding domain	PROSITE	PS50886	TRBD	coord: 110..213 score: 30.312288
None	No IPR available	GENE3D	2.40.50.140		coord: 109..278 e-value: 2.3E-43 score: 149.9 coord: 301..387 e-value: 1.2E-6 score: 30.4
None	No IPR available	PANTHER	PTHR11586:SF39	TYROSINE--TRNA LIGASE, CYTOPLASMIC	coord: 324..387 coord: 96..232
None	No IPR available	PANTHER	PTHR11586	TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER	coord: 96..232
None	No IPR available	PANTHER	PTHR11586	TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER	coord: 324..387
None	No IPR available	CDD	cd02799	tRNA_bind_EMAP-II_like	coord: 114..213 e-value: 1.66726E-61 score: 191.673
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 112..220

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG04G002910	ClCG04G002910	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG04G002910.2-exon	ClCG04G002910.2-exon-CG_Chr04:10913863..10914406	exon
ClCG04G002910.2-exon	ClCG04G002910.2-exon-CG_Chr04:10916212..10916304	exon
ClCG04G002910.2-exon	ClCG04G002910.2-exon-CG_Chr04:10916406..10916434	exon
ClCG04G002910.2-exon	ClCG04G002910.2-exon-CG_Chr04:10916590..10916730	exon
ClCG04G002910.2-exon	ClCG04G002910.2-exon-CG_Chr04:10919795..10919858	exon
ClCG04G002910.2-exon	ClCG04G002910.2-exon-CG_Chr04:10921065..10921271	exon
ClCG04G002910.2-exon	ClCG04G002910.2-exon-CG_Chr04:10930284..10930882	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG04G002910.2-three_prime_utr	ClCG04G002910.2-three_prime_utr-CG_Chr04:10913863..10914262	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG04G002910.2-cds	ClCG04G002910.2-cds-CG_Chr04:10914263..10914406	CDS
ClCG04G002910.2-cds	ClCG04G002910.2-cds-CG_Chr04:10916212..10916304	CDS
ClCG04G002910.2-cds	ClCG04G002910.2-cds-CG_Chr04:10916406..10916434	CDS
ClCG04G002910.2-cds	ClCG04G002910.2-cds-CG_Chr04:10916590..10916730	CDS
ClCG04G002910.2-cds	ClCG04G002910.2-cds-CG_Chr04:10919795..10919858	CDS
ClCG04G002910.2-cds	ClCG04G002910.2-cds-CG_Chr04:10921065..10921271	CDS
ClCG04G002910.2-cds	ClCG04G002910.2-cds-CG_Chr04:10930284..10930769	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG04G002910.2-five_prime_utr	ClCG04G002910.2-five_prime_utr-CG_Chr04:10930770..10930882	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG04G002910.2	ClCG04G002910.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0000049	tRNA binding