ClCG01G021210.2 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG01G021210.2
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionDNA oxidative demethylase ALKBH2
LocationCG_Chr01: 35129807 .. 35130988 (-)
Sequence length771
RNA-Seq ExpressionClCG01G021210.2
SyntenyClCG01G021210.2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAGTGTCATGAATTATGAAGAAATTTGCAGAATGAGTTTGAGGTTCAAAGAAGTGACCGACTCAGAATCGGAGACGAAGATCCCTCGTTCCTTTGATTTAGGAAGGCGACAGACATTGGATCTCGGCAATGGAAGCGAAATCGTCTACATTCCCAAGTTTGTCTCCTCCGATCAGGCTTGGACCTGGTTCGATCTTCTCAATCAACGCATTCCATGGACCAGGCCGACCATTCGCGTCTTTGGTCGCTCTGTCCTCCAGGTCTTCCCCTTTCTCGATTCTGTTCTCTCATTTAGTTTGTTTTCAACCTAATTGCAAATTAAAGATCCAACAATTAATATTAGGGTTTTGCGTATAGCATTTTTCACGCGATTGAGGATAACATTTAAGTTTTACTTTGCTAATGCAGCCTAGAGATACTTGCTACGTTGCGGATCCTGGATTGACTACATTAACTTATAGTGGATATAAACCTCATGCCTATACTTGGGATGATTTTCCTCCTCTTAAGGACATTTTGGATGCTGTAAGTTTTTTTTTCTCTCGACCTTTCCCTATCGGGTTTTCTTTGGCTACAAGTTCTCGTTGACGTTTCGAGTGGCTCCTAATTGTCTTCACTTTTCTATGTCAAGGTCCACGAAGCTCTTCCAGGGAGTAGTTTTAATAGCTTACTCTTGAACAGGTATAAAGGTGGTAATGATTATGTGGGTTGGCATTCTGATGATGAGAAAGTGTATGCATTGAACCAGGAGATTGCTTCTGTATCATTTGGATGTGAACGAGATTTCTTTTTGAAAAAGAAGCCCGACAAAACTTCTCAACGTAATCGGTCTATTTCATCTGTTTTTTTCTTTTTTCTTATTTTGTCTCTGTTCTGATTTGGAAAGCCTTTTTTTCTCAAATCTTTAGTGTTTTACTCAATTGCTTTCTTCACTTTAAAAAGTTCCATCATCTTATGGTTTATTTGATGTGGCCCCAGGAAGAAATGATGAGGAACCTCCGGCCAAGAAATCAAAGAAAAGCAGTGTGGCTAATTCACACTCATTTGGACTAAAGCATGGTTCACTTTTGGTTATGAAAGGCTACACTCAACGAGATTGGATGCATTCAGTGCCTAAGCGCCTTAAGACAGAGGCAACCCGCATCAATCTTACTTTCAGGCGCATTATTGTTGATTGA

mRNA sequence

ATGACGAGTGTCATGAATTATGAAGAAATTTGCAGAATGAGTTTGAGGTTCAAAGAAGTGACCGACTCAGAATCGGAGACGAAGATCCCTCGTTCCTTTGATTTAGGAAGGCGACAGACATTGGATCTCGGCAATGGAAGCGAAATCGTCTACATTCCCAAGTTTGTCTCCTCCGATCAGGCTTGGACCTGGTTCGATCTTCTCAATCAACGCATTCCATGGACCAGGCCGACCATTCGCGTCTTTGGTCGCTCTGTCCTCCAGCCTAGAGATACTTGCTACGTTGCGGATCCTGGATTGACTACATTAACTTATAGTGGATATAAACCTCATGCCTATACTTGGGATGATTTTCCTCCTCTTAAGGACATTTTGGATGCTGTCCACGAAGCTCTTCCAGGGAGTAGTTTTAATAGCTTACTCTTGAACAGGTATAAAGGTGGTAATGATTATGTGGGTTGGCATTCTGATGATGAGAAAGTGTATGCATTGAACCAGGAGATTGCTTCTGTATCATTTGGATGTGAACGAGATTTCTTTTTGAAAAAGAAGCCCGACAAAACTTCTCAACGAAGAAATGATGAGGAACCTCCGGCCAAGAAATCAAAGAAAAGCAGTGTGGCTAATTCACACTCATTTGGACTAAAGCATGGTTCACTTTTGGTTATGAAAGGCTACACTCAACGAGATTGGATGCATTCAGTGCCTAAGCGCCTTAAGACAGAGGCAACCCGCATCAATCTTACTTTCAGGCGCATTATTGTTGATTGA

Coding sequence (CDS)

ATGACGAGTGTCATGAATTATGAAGAAATTTGCAGAATGAGTTTGAGGTTCAAAGAAGTGACCGACTCAGAATCGGAGACGAAGATCCCTCGTTCCTTTGATTTAGGAAGGCGACAGACATTGGATCTCGGCAATGGAAGCGAAATCGTCTACATTCCCAAGTTTGTCTCCTCCGATCAGGCTTGGACCTGGTTCGATCTTCTCAATCAACGCATTCCATGGACCAGGCCGACCATTCGCGTCTTTGGTCGCTCTGTCCTCCAGCCTAGAGATACTTGCTACGTTGCGGATCCTGGATTGACTACATTAACTTATAGTGGATATAAACCTCATGCCTATACTTGGGATGATTTTCCTCCTCTTAAGGACATTTTGGATGCTGTCCACGAAGCTCTTCCAGGGAGTAGTTTTAATAGCTTACTCTTGAACAGGTATAAAGGTGGTAATGATTATGTGGGTTGGCATTCTGATGATGAGAAAGTGTATGCATTGAACCAGGAGATTGCTTCTGTATCATTTGGATGTGAACGAGATTTCTTTTTGAAAAAGAAGCCCGACAAAACTTCTCAACGAAGAAATGATGAGGAACCTCCGGCCAAGAAATCAAAGAAAAGCAGTGTGGCTAATTCACACTCATTTGGACTAAAGCATGGTTCACTTTTGGTTATGAAAGGCTACACTCAACGAGATTGGATGCATTCAGTGCCTAAGCGCCTTAAGACAGAGGCAACCCGCATCAATCTTACTTTCAGGCGCATTATTGTTGATTGA

Protein sequence

MTSVMNYEEICRMSLRFKEVTDSESETKIPRSFDLGRRQTLDLGNGSEIVYIPKFVSSDQAWTWFDLLNQRIPWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKDILDAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKKKPDKTSQRRNDEEPPAKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEATRINLTFRRIIVD
Homology
BLAST of ClCG01G021210.2 vs. NCBI nr
Match: XP_038882915.1 (DNA oxidative demethylase ALKBH2 [Benincasa hispida] >XP_038882916.1 DNA oxidative demethylase ALKBH2 [Benincasa hispida] >XP_038882917.1 DNA oxidative demethylase ALKBH2 [Benincasa hispida] >XP_038882918.1 DNA oxidative demethylase ALKBH2 [Benincasa hispida] >XP_038882919.1 DNA oxidative demethylase ALKBH2 [Benincasa hispida] >XP_038882920.1 DNA oxidative demethylase ALKBH2 [Benincasa hispida] >XP_038882921.1 DNA oxidative demethylase ALKBH2 [Benincasa hispida])

HSP 1 Score: 478.0 bits (1229), Expect = 5.0e-131
Identity = 228/244 (93.44%), Postives = 235/244 (96.31%), Query Frame = 0

Query: 13  MSLRFKEVTDSESETKIPRSFDLGRRQTLDLGNGSEIVYIPKFVSSDQAWTWFDLLNQRI 72
           MSLR KEVTDSESETKIPR F+ GRRQTLDLGNGSEIVY+PKFV SDQAWTWFD LNQRI
Sbjct: 1   MSLRLKEVTDSESETKIPRPFNSGRRQTLDLGNGSEIVYVPKFVPSDQAWTWFDFLNQRI 60

Query: 73  PWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKDILDAVHEAL 132
           PWTRPTIRVFGRSVLQPRDTCYVA+PGLTTLTYSGYKPHAYTWDDFPPLKDILDAVHEAL
Sbjct: 61  PWTRPTIRVFGRSVLQPRDTCYVANPGLTTLTYSGYKPHAYTWDDFPPLKDILDAVHEAL 120

Query: 133 PGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKKKPDKTSQRR 192
           PGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDF LKKKP+KTSQRR
Sbjct: 121 PGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFLLKKKPNKTSQRR 180

Query: 193 NDEEPPAKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEATRINLTFRR 252
           NDEEPPAKKSKKSSVA+SHSF LKHGSLLVM+GYTQRDWMHSVPKRLK EATRINLTFR 
Sbjct: 181 NDEEPPAKKSKKSSVADSHSFVLKHGSLLVMRGYTQRDWMHSVPKRLKAEATRINLTFRH 240

Query: 253 IIVD 257
           +IVD
Sbjct: 241 VIVD 244

BLAST of ClCG01G021210.2 vs. NCBI nr
Match: XP_004134811.1 (DNA oxidative demethylase ALKBH2 [Cucumis sativus] >XP_031742939.1 DNA oxidative demethylase ALKBH2 [Cucumis sativus] >XP_031742940.1 DNA oxidative demethylase ALKBH2 [Cucumis sativus] >KGN49032.1 hypothetical protein Csa_003044 [Cucumis sativus])

HSP 1 Score: 472.6 bits (1215), Expect = 2.1e-129
Identity = 227/244 (93.03%), Postives = 233/244 (95.49%), Query Frame = 0

Query: 13  MSLRFKEVTDSESETKIPRSFDLGRRQTLDLGNGSEIVYIPKFVSSDQAWTWFDLLNQRI 72
           MSLRFKEVTDSESETKIPR FDLG+RQTLDLGNGSEI+YI KFVSSDQAWTWFD LNQRI
Sbjct: 1   MSLRFKEVTDSESETKIPRPFDLGKRQTLDLGNGSEILYISKFVSSDQAWTWFDFLNQRI 60

Query: 73  PWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKDILDAVHEAL 132
           PWTRPTI VFGRSVLQPRDTCYVA+PGLTTLTYSGYKPHAYTWDDF PLKDILDAVHEAL
Sbjct: 61  PWTRPTICVFGRSVLQPRDTCYVANPGLTTLTYSGYKPHAYTWDDFTPLKDILDAVHEAL 120

Query: 133 PGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKKKPDKTSQRR 192
           PGS FNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDF LKKKP+KTSQRR
Sbjct: 121 PGSRFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFLLKKKPNKTSQRR 180

Query: 193 NDEEPPAKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEATRINLTFRR 252
           NDEEPPAKKSKKSSVA+ HSF LKHGSLLVMKGYTQRDWMHSVPKRLK EATRINLTFR 
Sbjct: 181 NDEEPPAKKSKKSSVADRHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH 240

Query: 253 IIVD 257
           +IVD
Sbjct: 241 VIVD 244

BLAST of ClCG01G021210.2 vs. NCBI nr
Match: XP_022950477.1 (DNA oxidative demethylase ALKBH2 isoform X2 [Cucurbita moschata] >KAG7034017.1 DNA oxidative demethylase ALKBH2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 470.7 bits (1210), Expect = 8.0e-129
Identity = 225/250 (90.00%), Postives = 235/250 (94.00%), Query Frame = 0

Query: 4   VMNYEEICRMSLRFKEVTDSESETKIPRSFDLGRRQTLDLGNGSEIVYIPKFVSSDQAWT 63
           V+NYEE  RMSLRFKEV DSESETKIPR  DLGRRQTLDLGNGSEIVYI KFVSSDQAWT
Sbjct: 6   VVNYEEFGRMSLRFKEVIDSESETKIPRPLDLGRRQTLDLGNGSEIVYISKFVSSDQAWT 65

Query: 64  WFDLLNQRIPWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKD 123
           WFD LNQ IPWTRPTIRVFGRSV+QPRDTCYV +PGLTT +YSGYKPHAYTWDDFPPLKD
Sbjct: 66  WFDFLNQHIPWTRPTIRVFGRSVVQPRDTCYVVNPGLTTYSYSGYKPHAYTWDDFPPLKD 125

Query: 124 ILDAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKK 183
           IL+AVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEK+YALNQEIASVSFGCERDF LKK
Sbjct: 126 ILNAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKK 185

Query: 184 KPDKTSQRRNDEEPPAKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEA 243
           K +KTSQRRNDEEPPAKKSKKSSVA++HSF LKHGSLLVMKGYTQRDWMHSVPKRLK EA
Sbjct: 186 KSNKTSQRRNDEEPPAKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEA 245

Query: 244 TRINLTFRRI 254
           TRINLTFR +
Sbjct: 246 TRINLTFRHV 255

BLAST of ClCG01G021210.2 vs. NCBI nr
Match: XP_022950476.1 (DNA oxidative demethylase ALKBH2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 469.9 bits (1208), Expect = 1.4e-128
Identity = 225/248 (90.73%), Postives = 234/248 (94.35%), Query Frame = 0

Query: 4   VMNYEEICRMSLRFKEVTDSESETKIPRSFDLGRRQTLDLGNGSEIVYIPKFVSSDQAWT 63
           V+NYEE  RMSLRFKEV DSESETKIPR  DLGRRQTLDLGNGSEIVYI KFVSSDQAWT
Sbjct: 6   VVNYEEFGRMSLRFKEVIDSESETKIPRPLDLGRRQTLDLGNGSEIVYISKFVSSDQAWT 65

Query: 64  WFDLLNQRIPWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKD 123
           WFD LNQ IPWTRPTIRVFGRSV+QPRDTCYV +PGLTT +YSGYKPHAYTWDDFPPLKD
Sbjct: 66  WFDFLNQHIPWTRPTIRVFGRSVVQPRDTCYVVNPGLTTYSYSGYKPHAYTWDDFPPLKD 125

Query: 124 ILDAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKK 183
           IL+AVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEK+YALNQEIASVSFGCERDF LKK
Sbjct: 126 ILNAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKK 185

Query: 184 KPDKTSQRRNDEEPPAKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEA 243
           K +KTSQRRNDEEPPAKKSKKSSVA++HSF LKHGSLLVMKGYTQRDWMHSVPKRLK EA
Sbjct: 186 KSNKTSQRRNDEEPPAKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEA 245

Query: 244 TRINLTFR 252
           TRINLTFR
Sbjct: 246 TRINLTFR 253

BLAST of ClCG01G021210.2 vs. NCBI nr
Match: XP_022977708.1 (DNA oxidative demethylase ALKBH2 [Cucurbita maxima])

HSP 1 Score: 467.6 bits (1202), Expect = 6.8e-128
Identity = 224/248 (90.32%), Postives = 233/248 (93.95%), Query Frame = 0

Query: 4   VMNYEEICRMSLRFKEVTDSESETKIPRSFDLGRRQTLDLGNGSEIVYIPKFVSSDQAWT 63
           V+NYEE  RMSLRFKEV DSESETKIPR  DLGRRQTLDLGNGSEIVYI KFVSSDQAWT
Sbjct: 6   VVNYEEFDRMSLRFKEVIDSESETKIPRPLDLGRRQTLDLGNGSEIVYISKFVSSDQAWT 65

Query: 64  WFDLLNQRIPWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKD 123
           WFD LNQ IPWTRPTIRVFGRSV+QPRDTCYV +PGLT  +YSGYKPHAYTWDDFPPLKD
Sbjct: 66  WFDFLNQHIPWTRPTIRVFGRSVVQPRDTCYVVNPGLTIYSYSGYKPHAYTWDDFPPLKD 125

Query: 124 ILDAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKK 183
           IL+AVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEK+YALNQEIASVSFGCERDF LKK
Sbjct: 126 ILNAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKK 185

Query: 184 KPDKTSQRRNDEEPPAKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEA 243
           K +KTSQRRNDEEPPAKKSKKSSVA++HSF LKHGSLLVMKGYTQRDWMHSVPKRLK EA
Sbjct: 186 KSNKTSQRRNDEEPPAKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEA 245

Query: 244 TRINLTFR 252
           TRINLTFR
Sbjct: 246 TRINLTFR 253

BLAST of ClCG01G021210.2 vs. ExPASy Swiss-Prot
Match: Q9SIE0 (DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana OX=3702 GN=ALKBH2 PE=2 SV=2)

HSP 1 Score: 317.4 bits (812), Expect = 1.5e-85
Identity = 152/245 (62.04%), Postives = 185/245 (75.51%), Query Frame = 0

Query: 12  RMSLRFKEVTDSESETKIPRSFDLGRRQTLDLGNGSEIVYIPKFVSSDQAWTWFDLLNQR 71
           RMSL      +S S +  P       R+T+DLG+GS+++YI +F+   Q+WT+FD L++ 
Sbjct: 76  RMSLTSIVAVESPSSSNAP------SRKTIDLGHGSDLIYIQRFLPFQQSWTFFDYLDKH 135

Query: 72  IPWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKDILDAVHEA 131
           IPWTRPTIRVFGRS LQPRDTCYVA  GLT L YSGY+P +Y+WDDFPPLK+ILDA+++ 
Sbjct: 136 IPWTRPTIRVFGRSCLQPRDTCYVASSGLTALVYSGYRPTSYSWDDFPPLKEILDAIYKV 195

Query: 132 LPGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKKKPDKTSQ- 191
           LPGS FNSLLLNRYKG +DYV WH+DDEK+Y    EIASVSFGCERDF LKKK D+ S  
Sbjct: 196 LPGSRFNSLLLNRYKGASDYVAWHADDEKIYGPTPEIASVSFGCERDFVLKKKKDEESSQ 255

Query: 192 -RRNDEEPPAKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEATRINLT 251
            +  D  P  K+ K+SS  +  S  LKHGSLLVM+GYTQRDW+HSVPKR K E TRINLT
Sbjct: 256 GKTGDSGPAKKRLKRSSREDQQSLTLKHGSLLVMRGYTQRDWIHSVPKRAKAEGTRINLT 314

Query: 252 FRRII 255
           FR ++
Sbjct: 316 FRLVL 314

BLAST of ClCG01G021210.2 vs. ExPASy Swiss-Prot
Match: Q58DM4 (DNA oxidative demethylase ALKBH2 OS=Bos taurus OX=9913 GN=ALKBH2 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.8e-22
Identity = 69/176 (39.20%), Postives = 91/176 (51.70%), Query Frame = 0

Query: 79  IRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKDILDAVHEALPGSSFN 138
           ++VFG+    PR      D GL T T+SG       W   P L+ + D V   + G +FN
Sbjct: 98  VQVFGKWHSVPRKQATYGDTGL-TYTFSGLTLSPKPW--IPVLERVRDRV-SLVTGQTFN 157

Query: 139 SLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKKKPDKTSQRRNDEEPP 198
            +L+NRYK G D++G H DDE+  AL   IASVSFG  RDF  + K  +           
Sbjct: 158 FVLINRYKDGQDHIGEHRDDERELALGSPIASVSFGACRDFVFRHKDSRGKH-------- 217

Query: 199 AKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEATRINLTFRRII 255
              S++  V       L HGSLL+M   T   W HS+P R K  A R+NLTFR+I+
Sbjct: 218 --PSRRLEVVR---LQLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKIL 256

BLAST of ClCG01G021210.2 vs. ExPASy Swiss-Prot
Match: Q32L00 (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Bos taurus OX=9913 GN=ALKBH3 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.9e-22
Identity = 75/214 (35.05%), Postives = 99/214 (46.26%), Query Frame = 0

Query: 47  SEIVYIPKFVSSDQAWTWFDLLNQRIPWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYS 106
           S +   P FV   +A + F+ L + +PW + T      +  QPR T +    G    TYS
Sbjct: 88  SRVCLCPGFVDLKEADSVFEQLCRDVPWKQRTGIRDDVTYQQPRLTAWY---GELPYTYS 147

Query: 107 GY----KPHAYTWDDFPPLKDILDAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKVY 166
                  PH      + P+  +L    E   G SFNSLL N Y+   D V WHSDDE   
Sbjct: 148 RITMEPNPH------WHPVLLMLKNQIEENTGHSFNSLLCNLYRNEKDSVDWHSDDEPSL 207

Query: 167 ALNQEIASVSFGCERDFFLKKKPDKTSQRRNDEEPPAKKSKKSSVANSHSFGLKHGSLLV 226
                IAS+SFG  R F ++KK            PP + +   +        L HG+LL+
Sbjct: 208 GRCPIIASLSFGATRMFEMRKK------------PPPEDNGDYTYVERVKIPLDHGTLLI 267

Query: 227 MKGYTQRDWMHSVPKRLKTEATRINLTFRRIIVD 257
           M+G TQ DW H VPK   +   RINLTFR +  D
Sbjct: 268 MEGATQADWQHRVPKEYHSREPRINLTFRTVYPD 280

BLAST of ClCG01G021210.2 vs. ExPASy Swiss-Prot
Match: Q96Q83 (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Homo sapiens OX=9606 GN=ALKBH3 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.9e-22
Identity = 74/214 (34.58%), Postives = 100/214 (46.73%), Query Frame = 0

Query: 47  SEIVYIPKFVSSDQAWTWFDLLNQRIPWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYS 106
           S +   P FV   +A    + L Q +PW + T      +  QPR T +    G    TYS
Sbjct: 88  SRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWY---GELPYTYS 147

Query: 107 GY----KPHAYTWDDFPPLKDILDAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKVY 166
                  PH   W   P L+ + + + E   G +FNSLL N Y+   D V WHSDDE   
Sbjct: 148 RITMEPNPH---W--HPVLRTLKNRIEEN-TGHTFNSLLCNLYRNEKDSVDWHSDDEPSL 207

Query: 167 ALNQEIASVSFGCERDFFLKKKPDKTSQRRNDEEPPAKKSKKSSVANSHSFGLKHGSLLV 226
                IAS+SFG  R F ++KK            PP +++   +        L HG+LL+
Sbjct: 208 GRCPIIASLSFGATRTFEMRKK------------PPPEENGDYTYVERVKIPLDHGTLLI 267

Query: 227 MKGYTQRDWMHSVPKRLKTEATRINLTFRRIIVD 257
           M+G TQ DW H VPK   +   R+NLTFR +  D
Sbjct: 268 MEGATQADWQHRVPKEYHSREPRVNLTFRTVYPD 280

BLAST of ClCG01G021210.2 vs. ExPASy Swiss-Prot
Match: Q6NS38 (DNA oxidative demethylase ALKBH2 OS=Homo sapiens OX=9606 GN=ALKBH2 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.5e-21
Identity = 69/177 (38.98%), Postives = 92/177 (51.98%), Query Frame = 0

Query: 79  IRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKDILDAVHEALPGSSFN 138
           ++VFG+    PR      D GL T T+SG       W   P L+ I D V   + G +FN
Sbjct: 99  VQVFGKWHSVPRKQATYGDAGL-TYTFSGLTLSPKPW--IPVLERIRDHV-SGVTGQTFN 158

Query: 139 SLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKKKPDKTSQRRNDEEPP 198
            +L+NRYK G D++G H DDE+  A    IASVSFG  RDF  + K  +           
Sbjct: 159 FVLINRYKDGCDHIGEHRDDERELAPGSPIASVSFGACRDFVFRHKDSRGK--------- 218

Query: 199 AKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEATRINLTFRRIIV 256
              S++ +V       L HGSLL+M   T   W HS+P R K  A R+NLTFR+I++
Sbjct: 219 -SPSRRVAVVR---LPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKILL 258

BLAST of ClCG01G021210.2 vs. ExPASy TrEMBL
Match: A0A0A0KL20 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G510990 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.0e-129
Identity = 227/244 (93.03%), Postives = 233/244 (95.49%), Query Frame = 0

Query: 13  MSLRFKEVTDSESETKIPRSFDLGRRQTLDLGNGSEIVYIPKFVSSDQAWTWFDLLNQRI 72
           MSLRFKEVTDSESETKIPR FDLG+RQTLDLGNGSEI+YI KFVSSDQAWTWFD LNQRI
Sbjct: 1   MSLRFKEVTDSESETKIPRPFDLGKRQTLDLGNGSEILYISKFVSSDQAWTWFDFLNQRI 60

Query: 73  PWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKDILDAVHEAL 132
           PWTRPTI VFGRSVLQPRDTCYVA+PGLTTLTYSGYKPHAYTWDDF PLKDILDAVHEAL
Sbjct: 61  PWTRPTICVFGRSVLQPRDTCYVANPGLTTLTYSGYKPHAYTWDDFTPLKDILDAVHEAL 120

Query: 133 PGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKKKPDKTSQRR 192
           PGS FNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDF LKKKP+KTSQRR
Sbjct: 121 PGSRFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFLLKKKPNKTSQRR 180

Query: 193 NDEEPPAKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEATRINLTFRR 252
           NDEEPPAKKSKKSSVA+ HSF LKHGSLLVMKGYTQRDWMHSVPKRLK EATRINLTFR 
Sbjct: 181 NDEEPPAKKSKKSSVADRHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH 240

Query: 253 IIVD 257
           +IVD
Sbjct: 241 VIVD 244

BLAST of ClCG01G021210.2 vs. ExPASy TrEMBL
Match: A0A6J1GEX9 (DNA oxidative demethylase ALKBH2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453571 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 3.9e-129
Identity = 225/250 (90.00%), Postives = 235/250 (94.00%), Query Frame = 0

Query: 4   VMNYEEICRMSLRFKEVTDSESETKIPRSFDLGRRQTLDLGNGSEIVYIPKFVSSDQAWT 63
           V+NYEE  RMSLRFKEV DSESETKIPR  DLGRRQTLDLGNGSEIVYI KFVSSDQAWT
Sbjct: 6   VVNYEEFGRMSLRFKEVIDSESETKIPRPLDLGRRQTLDLGNGSEIVYISKFVSSDQAWT 65

Query: 64  WFDLLNQRIPWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKD 123
           WFD LNQ IPWTRPTIRVFGRSV+QPRDTCYV +PGLTT +YSGYKPHAYTWDDFPPLKD
Sbjct: 66  WFDFLNQHIPWTRPTIRVFGRSVVQPRDTCYVVNPGLTTYSYSGYKPHAYTWDDFPPLKD 125

Query: 124 ILDAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKK 183
           IL+AVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEK+YALNQEIASVSFGCERDF LKK
Sbjct: 126 ILNAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKK 185

Query: 184 KPDKTSQRRNDEEPPAKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEA 243
           K +KTSQRRNDEEPPAKKSKKSSVA++HSF LKHGSLLVMKGYTQRDWMHSVPKRLK EA
Sbjct: 186 KSNKTSQRRNDEEPPAKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEA 245

Query: 244 TRINLTFRRI 254
           TRINLTFR +
Sbjct: 246 TRINLTFRHV 255

BLAST of ClCG01G021210.2 vs. ExPASy TrEMBL
Match: A0A6J1GEX8 (DNA oxidative demethylase ALKBH2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453571 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 6.6e-129
Identity = 225/248 (90.73%), Postives = 234/248 (94.35%), Query Frame = 0

Query: 4   VMNYEEICRMSLRFKEVTDSESETKIPRSFDLGRRQTLDLGNGSEIVYIPKFVSSDQAWT 63
           V+NYEE  RMSLRFKEV DSESETKIPR  DLGRRQTLDLGNGSEIVYI KFVSSDQAWT
Sbjct: 6   VVNYEEFGRMSLRFKEVIDSESETKIPRPLDLGRRQTLDLGNGSEIVYISKFVSSDQAWT 65

Query: 64  WFDLLNQRIPWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKD 123
           WFD LNQ IPWTRPTIRVFGRSV+QPRDTCYV +PGLTT +YSGYKPHAYTWDDFPPLKD
Sbjct: 66  WFDFLNQHIPWTRPTIRVFGRSVVQPRDTCYVVNPGLTTYSYSGYKPHAYTWDDFPPLKD 125

Query: 124 ILDAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKK 183
           IL+AVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEK+YALNQEIASVSFGCERDF LKK
Sbjct: 126 ILNAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKK 185

Query: 184 KPDKTSQRRNDEEPPAKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEA 243
           K +KTSQRRNDEEPPAKKSKKSSVA++HSF LKHGSLLVMKGYTQRDWMHSVPKRLK EA
Sbjct: 186 KSNKTSQRRNDEEPPAKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEA 245

Query: 244 TRINLTFR 252
           TRINLTFR
Sbjct: 246 TRINLTFR 253

BLAST of ClCG01G021210.2 vs. ExPASy TrEMBL
Match: A0A6J1IQU8 (DNA oxidative demethylase ALKBH2 OS=Cucurbita maxima OX=3661 GN=LOC111477932 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.3e-128
Identity = 224/248 (90.32%), Postives = 233/248 (93.95%), Query Frame = 0

Query: 4   VMNYEEICRMSLRFKEVTDSESETKIPRSFDLGRRQTLDLGNGSEIVYIPKFVSSDQAWT 63
           V+NYEE  RMSLRFKEV DSESETKIPR  DLGRRQTLDLGNGSEIVYI KFVSSDQAWT
Sbjct: 6   VVNYEEFDRMSLRFKEVIDSESETKIPRPLDLGRRQTLDLGNGSEIVYISKFVSSDQAWT 65

Query: 64  WFDLLNQRIPWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKD 123
           WFD LNQ IPWTRPTIRVFGRSV+QPRDTCYV +PGLT  +YSGYKPHAYTWDDFPPLKD
Sbjct: 66  WFDFLNQHIPWTRPTIRVFGRSVVQPRDTCYVVNPGLTIYSYSGYKPHAYTWDDFPPLKD 125

Query: 124 ILDAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKK 183
           IL+AVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEK+YALNQEIASVSFGCERDF LKK
Sbjct: 126 ILNAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKK 185

Query: 184 KPDKTSQRRNDEEPPAKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEA 243
           K +KTSQRRNDEEPPAKKSKKSSVA++HSF LKHGSLLVMKGYTQRDWMHSVPKRLK EA
Sbjct: 186 KSNKTSQRRNDEEPPAKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEA 245

Query: 244 TRINLTFR 252
           TRINLTFR
Sbjct: 246 TRINLTFR 253

BLAST of ClCG01G021210.2 vs. ExPASy TrEMBL
Match: A0A6J1BTV9 (DNA oxidative demethylase ALKBH2 OS=Momordica charantia OX=3673 GN=LOC111005717 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 6.2e-127
Identity = 220/252 (87.30%), Postives = 233/252 (92.46%), Query Frame = 0

Query: 5   MNYEEICRMSLRFKEVTDSESETKIPRSFDLGRRQTLDLGNGSEIVYIPKFVSSDQAWTW 64
           MN  E   M+LR KEVTDSESET+IPR  DLGRR TLDLGNGSEIVY+ KFV SD+AWTW
Sbjct: 1   MNQNEGGTMTLRLKEVTDSESETRIPRPLDLGRRHTLDLGNGSEIVYMTKFVPSDKAWTW 60

Query: 65  FDLLNQRIPWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKDI 124
           FD LNQRIPWTRPTIRVFGRS+LQPRDTCYVA PGLTTLTYSGYKP AYTWDDFPPLK+I
Sbjct: 61  FDFLNQRIPWTRPTIRVFGRSLLQPRDTCYVASPGLTTLTYSGYKPRAYTWDDFPPLKEI 120

Query: 125 LDAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKKK 184
           LDAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEK+YALNQEIASVSFGCERDF LKKK
Sbjct: 121 LDAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKKK 180

Query: 185 PDKTSQRRNDEEPPAKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEAT 244
           P+KTSQRRNDEEPP+KKSKKS VA++HSF LKHGSLLVMKGYTQRDWMHSVPKRLK EAT
Sbjct: 181 PNKTSQRRNDEEPPSKKSKKSGVADTHSFALKHGSLLVMKGYTQRDWMHSVPKRLKAEAT 240

Query: 245 RINLTFRRIIVD 257
           RINLTFR ++VD
Sbjct: 241 RINLTFRHVVVD 252

BLAST of ClCG01G021210.2 vs. TAIR 10
Match: AT2G22260.1 (oxidoreductase, 2OG-Fe(II) oxygenase family protein )

HSP 1 Score: 317.4 bits (812), Expect = 1.1e-86
Identity = 152/245 (62.04%), Postives = 185/245 (75.51%), Query Frame = 0

Query: 12  RMSLRFKEVTDSESETKIPRSFDLGRRQTLDLGNGSEIVYIPKFVSSDQAWTWFDLLNQR 71
           RMSL      +S S +  P       R+T+DLG+GS+++YI +F+   Q+WT+FD L++ 
Sbjct: 76  RMSLTSIVAVESPSSSNAP------SRKTIDLGHGSDLIYIQRFLPFQQSWTFFDYLDKH 135

Query: 72  IPWTRPTIRVFGRSVLQPRDTCYVADPGLTTLTYSGYKPHAYTWDDFPPLKDILDAVHEA 131
           IPWTRPTIRVFGRS LQPRDTCYVA  GLT L YSGY+P +Y+WDDFPPLK+ILDA+++ 
Sbjct: 136 IPWTRPTIRVFGRSCLQPRDTCYVASSGLTALVYSGYRPTSYSWDDFPPLKEILDAIYKV 195

Query: 132 LPGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFFLKKKPDKTSQ- 191
           LPGS FNSLLLNRYKG +DYV WH+DDEK+Y    EIASVSFGCERDF LKKK D+ S  
Sbjct: 196 LPGSRFNSLLLNRYKGASDYVAWHADDEKIYGPTPEIASVSFGCERDFVLKKKKDEESSQ 255

Query: 192 -RRNDEEPPAKKSKKSSVANSHSFGLKHGSLLVMKGYTQRDWMHSVPKRLKTEATRINLT 251
            +  D  P  K+ K+SS  +  S  LKHGSLLVM+GYTQRDW+HSVPKR K E TRINLT
Sbjct: 256 GKTGDSGPAKKRLKRSSREDQQSLTLKHGSLLVMRGYTQRDWIHSVPKRAKAEGTRINLT 314

Query: 252 FRRII 255
           FR ++
Sbjct: 316 FRLVL 314

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038882915.15.0e-13193.44DNA oxidative demethylase ALKBH2 [Benincasa hispida] >XP_038882916.1 DNA oxidati... [more]
XP_004134811.12.1e-12993.03DNA oxidative demethylase ALKBH2 [Cucumis sativus] >XP_031742939.1 DNA oxidative... [more]
XP_022950477.18.0e-12990.00DNA oxidative demethylase ALKBH2 isoform X2 [Cucurbita moschata] >KAG7034017.1 D... [more]
XP_022950476.11.4e-12890.73DNA oxidative demethylase ALKBH2 isoform X1 [Cucurbita moschata][more]
XP_022977708.16.8e-12890.32DNA oxidative demethylase ALKBH2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9SIE01.5e-8562.04DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana OX=3702 GN=ALKBH2 PE=2 ... [more]
Q58DM41.8e-2239.20DNA oxidative demethylase ALKBH2 OS=Bos taurus OX=9913 GN=ALKBH2 PE=2 SV=1[more]
Q32L008.9e-2235.05Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Bos taurus OX=9913 G... [more]
Q96Q838.9e-2234.58Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Homo sapiens OX=9606... [more]
Q6NS381.5e-2138.98DNA oxidative demethylase ALKBH2 OS=Homo sapiens OX=9606 GN=ALKBH2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KL201.0e-12993.03Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G... [more]
A0A6J1GEX93.9e-12990.00DNA oxidative demethylase ALKBH2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1GEX86.6e-12990.73DNA oxidative demethylase ALKBH2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1IQU83.3e-12890.32DNA oxidative demethylase ALKBH2 OS=Cucurbita maxima OX=3661 GN=LOC111477932 PE=... [more]
A0A6J1BTV96.2e-12787.30DNA oxidative demethylase ALKBH2 OS=Momordica charantia OX=3673 GN=LOC111005717 ... [more]
Match NameE-valueIdentityDescription
AT2G22260.11.1e-8662.04oxidoreductase, 2OG-Fe(II) oxygenase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-likePFAMPF135322OG-FeII_Oxy_2coord: 49..251
e-value: 2.7E-32
score: 112.6
IPR037151Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyGENE3D2.60.120.590coord: 37..255
e-value: 9.5E-60
score: 203.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..202
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 44..253
IPR032852DNA oxidative demethylase ALKBH2PANTHERPTHR31573ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2coord: 34..253
IPR005123Oxoglutarate/iron-dependent dioxygenasePROSITEPS51471FE2OG_OXYcoord: 136..254
score: 12.868257

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG01G021210ClCG01G021210gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG01G021210.2-exonClCG01G021210.2-exon-CG_Chr01:35129807..35130006exon
ClCG01G021210.2-exonClCG01G021210.2-exon-CG_Chr01:35130164..35130353exon
ClCG01G021210.2-exonClCG01G021210.2-exon-CG_Chr01:35130460..35130576exon
ClCG01G021210.2-exonClCG01G021210.2-exon-CG_Chr01:35130725..35130988exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG01G021210.2-cdsClCG01G021210.2-cds-CG_Chr01:35129807..35130006CDS
ClCG01G021210.2-cdsClCG01G021210.2-cds-CG_Chr01:35130164..35130353CDS
ClCG01G021210.2-cdsClCG01G021210.2-cds-CG_Chr01:35130460..35130576CDS
ClCG01G021210.2-cdsClCG01G021210.2-cds-CG_Chr01:35130725..35130988CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG01G021210.2ClCG01G021210.2-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0006307 DNA dealkylation involved in DNA repair
biological_process GO:0032259 methylation
biological_process GO:0035511 oxidative DNA demethylation
molecular_function GO:0051747 cytosine C-5 DNA demethylase activity
molecular_function GO:0043734 DNA-N1-methyladenine dioxygenase activity
molecular_function GO:0008198 ferrous iron binding
molecular_function GO:0008168 methyltransferase activity