Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. GTGAGAGGAAAATAAAGATGCCCGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGCTGTGGAAGTAGGGTTGCAAGAGGAAGATGAAAAAATAGAAAGATTTGTAGTTCCAATATCTTATTTATATCATCCTCTATTCAAGAATCTTTTGGACAAAGCTCAAGAAATTTATGGCTACCATGCCAATGGTCCTCTTCGGCTTCCGTGCTCAGTCGACGACTTTCTCCAACTCCGATGGCAGATCGAGAAAGAATCTGACCAACATATTGACAAACAAAATCATCATCGTCATCGCCACCAGCATCACCACTATCATCTTCCACTTGCTTTGTCTTTCCAGTCTTGTTGAGGAGAACTTTTGTTTAGTTCGATGGTTTTAGGGTTAGAAAGATGTGAACCCTAATTCAAAAAACATGTGTTTGTATGTCTTAGCTTTCTTCTTGCTGTATATTTTTTAAAATTGGCAAAGAAGATGGAATTGTGTTTTGACAT mRNA sequence GTGAGAGGAAAATAAAGATGCCCGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGCTGTGGAAGTAGGGTTGCAAGAGGAAGATGAAAAAATAGAAAGATTTGTAGTTCCAATATCTTATTTATATCATCCTCTATTCAAGAATCTTTTGGACAAAGCTCAAGAAATTTATGGCTACCATGCCAATGGTCCTCTTCGGCTTCCGTGCTCAGTCGACGACTTTCTCCAACTCCGATGGCAGATCGAGAAAGAATCTGACCAACATATTGACAAACAAAATCATCATCGTCATCGCCACCAGCATCACCACTATCATCTTCCACTTGCTTTGTCTTTCCAGTCTTGTTGAGGAGAACTTTTGTTTAGTTCGATGGTTTTAGGGTTAGAAAGATGTGAACCCTAATTCAAAAAACATGTGTTTGTATGTCTTAGCTTTCTTCTTGCTGTATATTTTTTAAAATTGGCAAAGAAGATGGAATTGTGTTTTGACAT Coding sequence (CDS) GTGAGAGGAAAATAAAGATGCCCGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGCTGTGGAAGTAGGGTTGCAAGAGGAAGATGAAAAAATAGAAAGATTTGTAGTTCCAATATCTTATTTATATCATCCTCTATTCAAGAATCTTTTGGACAAAGCTCAAGAAATTTATGGCTACCATGCCAATGGTCCTCTTCGGCTTCCGTGCTCAGTCGACGACTTTCTCCAACTCCGATGGCAGATCGAGAAAGAATCTGACCAACATATTGACAAACAAAATCATCATCGTCATCGCCACCAGCATCACCACTATCATCTTCCACTTGCTTTGTCTTTCCAGTCTTGTTGAGGAGAACTTTTGTTTAGTTCGATGGTTTTAGGGTTAGAAAGATGTGAACCCTAATTCAAAAAACATGTGTTTGTATGTCTTAGCTTTCTTCTTGCTGTATATTTTTTAAAATTGGCAAAGAAGATGGAATTGTGTTTTGACAT Protein sequence VRGK*RCPRRRK*R*RKDG*LWK*GCKRKMKK*KDL*FQYLIYIILYSRIFWTKLKKFMATMPMVLFGFRAQSTTFSNSDGRSRKNLTNILTNKIIIVIATSITTIIFHLLCLSSLVEENFCLVRWF*G*KDVNPNSKNMCLYVLAFFLLYIF*NWQRRWNCVLTX
Homology
BLAST of Chy8G146210.1 vs. NCBI nr
Match: KAF3439302.1 (hypothetical protein FNV43_RR17578 [Rhamnella rubrinervis]) HSP 1 Score: 47.8 bits (112), Expect = 9.65e-04 Identity = 35/81 (43.21%), Postives = 39/81 (48.15%), Query Frame = 0
Query: 38 FQYLIYIILYSRIFWTKLKKFMATMPMVLFGFRAQSTTFSNSDGRSRKNLTNILTNKIII 97
FQ LI I L SR FW KL +FMAT GF S TF S GR RK T
Sbjct: 9 FQSLISITLSSRSFWKKLMRFMATTVPDRLGFLVPSMTFFISGGRLRKRRT--------- 68
Query: 98 VIATSITTIIFHLLCLSSLVE 118
T+ T IF LC S+L +
Sbjct: 69 ---TTTTITIFLALCPSTLAD 77
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAF3439302.1 | 9.65e-04 | 43.21 | hypothetical protein FNV43_RR17578 [Rhamnella rubrinervis] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Chy8G146210.1.exon1 | Chy8G146210.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Chy8G146210.1.cds1 | Chy8G146210.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Chy8G146210.1 | Chy8G146210.1-protein | polypeptide |
|
