Chy6G105800.1 (mRNA) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTATTACTTGCTCAACGCCCTCTCTTACCACCTCCGCCCATTCTCTTTCTTGTAAGACCCATTCCTCCACTCCCTATCTTCTTCTTCTTCTCCTTTCATCTCTTCAATTTTCCCACTATTTTGGATTTTTGCGATGAAAATGTACAGAGATTTCGTACTTGCATTTTGGGTACTTTCTATTTTTCTATATTCACAATGAATTTTGCTCTAGATTGAGTTTGCTCTTAATACAACTCAGATTATCTATGTTTTTGGGCATCTGCTTCGTATCGTCTTGTTTGCCTTGTTCAATTGTTGCTTGTAGAAGAGGAGTGCGATTTATCGCCTTTAGTGATCTCTCCTTTCTCATCTCCTCAGTATTTCCCCGTCTGCAAGTTCGTTTTTTCGTAGTTGAGCCTCTCTAAGCTGTTCATTTGCAGAAATTATATATATATATATATTTTTTATCTGTTAAAACAGTGATCTAATTAAATTTTATTGTAACCTCTTAATTTAAGCCTTTAGATTCAGTGGTGAGTTAACGTTGTATAGTGTAAGAATTCTTATGTTCGAACCTCTGAAATTTAATTTCATTCCCAATTATATTGACTTTCACCTATATTTTTCCTAAATTTTCAAGAACACAAATAAGGGAGTGAGAGTGATTCCAAAATTGTTGTTGTCATTTTTAAAGTTACCTGTAAAATGCTTTTAAATTTTCAAAACCAATTTTATTGGTATGAGAAATGTGTTTAAAAGTATAAAATTAAACTTTGAGTTGACTTTGAGTGGTTTAAACTGTGTTTCAAAGTCATTTTAAATATGAAGAAAGTGATTTTAATAACTTCAAAATCACTCTCAAACACATACTTACAATATTAGTATAGTTAATTTATTTACTTAAGCTTTTGGGTTGGATAGTTAGTTAACAAGATAGAGTGGTAATTTGACTGTTTTTCAATGCATGCCTCATTGAGTTGGGTTGAATATTGTATTGGTTCATCTCTACCTGTTCCTTTGGTTTTATAAGTCTATTGACGCCCACTGGCAGACAGGGCATTTTCAGGATGTGCAACATCAAGAGCTTTCATAACTCAAACCAAGCAAGTACAGCGCTACTGCTCATGTCAGAGTTTCAATCACAGCAGGTTACTTTGAATATTTGTTGATGGCTGTGATTACTGATTTGTATTTCATAGTGAAGAAGGTATCTTGTGATCAGATAAGTGCTGACCAGGAATTTTTTTTCGTGCATGATCAGCGAAGAGAATTCTTATATATCATTATCCAATGAGAATTCCAGGCGAAAGATTCTCCTTTTTTTCTTATCAACTACAGCTTTATTTCCCACTCGGCATTCTTCTGCCAAGACAAAGAATAAGAATCCATACGATGAAAGACGCTTACTAGAGCAAAACAAACGGAGACAAAAAGAAAATAATGCTCCTGTCGACTTTCCAAGCTTTGTCAGGGAAGGTATGTATCAGGCTGCTATTCCATGGTTCTAATGAGGTACCTTCAACTTCAAGGCTTCTAAATGCAACTCTGATGTCTTTCCTGTAAATAAAAGAGAGTCAAATAAAGTCAAATGTATAAACATTACAGATTTTCTAATGTGTGGCTCAGGTTTCGAGGTTAAGGTAATAGCACCAGAGTCCTATGTCAAACGTGACTCTGGGCTCATATATTGGGATATCGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTTTGATTTTCTTTTCAAAACTATAATATCATTTCTTCAATTTTCTTGCAGAATCAATATCTATCTTTTAGTGGTGTAGTATTCAGATTAGAAAACCATATATTCAGTTGAAGTGTGTTTGACTTGCTGATTCGATTGTCACATTTTATGGTGTCAGTATGAATTGAGAGTTCACTTTTATTTGAGAGAGAGAGAGAGAGAAAGGAAATGATGTGTCCACATTGTGATTTCCCGGAAATGAATTCCAATCTCTGATGTCAGCCAACAGGAGTGGCATTAAGATTGTTCATGTAAGAAATCCTAGAAGGCTGAATGATACTTCGTGAACGTTCACTTGGTCCATTGATGACTACTGTGTATCAGAATCTCAGAAGCTTAAAGAAAATGATATATGCACGTGCACCTTTTGCAGTAATAGCCGGACTTAGAATTGGTTAACATAAGATTATTTTAATTCGTATACATAGTTTAGTGATTAGGTCTCTATTTGAAAGACAAAACTGAGTTTGAGGGGTGGAATTTCCAGGAACTTCAGAAGATCTCTGGAAATGTATGAAAAGTGTTTCTTGGTTTAATCTAAATAATTGTAAGAACAATTTGAATGTTGTTGGTAAAAATAATTCACCAACCTCACTATGAACAGCTGATTTTGTAATAAGTGATCGTTGCATGTTTTTGACATTAGTGAAGTTTCCTGGTGTACATTGTGAATGTGAAGTTCCTTTCAGGTGATCTTTCACTATGTTGGCTATAATGAATCTGGTCGTCGAATTGATAGCACATACTTACAGGGTTCTCCTGCCAGAATCCGTGTGGGCACAAATGCATTGGTCCCAGGTAGTTAAATCATGCCCCTTTATCACCAAACGCACCCACAAGAGGAAAAAAGAACACTCACCACCAATTTTGTAAAAGCAAGAGGAAATTTATATGCAGTTGAAAATAATCAAATAGCATCTGAAAGAAAAATATTGCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAAAGGAGAATAATAATCCCACCAGAACTTGGACCACCTGTGAGTTCTCAAGCATATGATTATTGTTTCAGTTTTATATAAACATCTTAAATATCTTGTAACTGATTGTTATATATGCAGCAATTTTTATTCATGCAAGCAAAGACCACACCCATAATTTGACCTCCCATTTGCTGCAGTTGTATTTACACGTGATAGAATTCAACTCCAGCTAGACAAGCCTCTATCTTTTACCATGAGATTGTTTATTTAGATAATTAAATGATGTTTTCTTGCTTAGCAGAATACTAGAATCTCAATAGGAGAGAGGACACTAATATTGGAGAACATACTAGGTTGGGGTAGATTAGAAAGTTGCCCACTCAAAGTAAAGGAACCCCAGCAGGCATTAGCAAATAAGTTGAACTGAATAAGAGGACAATAATAGCAAATGTACAACAGGTGAAAGAAAATAAACCCAAGAAGACAATATGATTACAAAAGTTTCCTCAAAACAATAGTTGCAAAAAGTTATTTTTTGATTAAAAAAAACCCTTAAAAACATAGGAGGGACTGATTGTGAAAACTGAAAAACCTTTGAAATACACCCAGAATAACCCGCAAAGCTCGAACTCTCTAAAATTTCCCCCCTTGTGTACAATAAAGGTTTTGCGCTTTCTTATGGAGTGAATTTCCATTTTCCAGATAATGGAGCTTACTAATCTAAGAAATCTTAGTTCTATATATCAACCAGTGACCACAAACTAGATGTTTTAAAAACCTTGAAGCTTGTTGGAGAAGTGCTACAATGGATGTAATTCCTTTTGGAGTTTATTTGCAGATTTCTTCATGCTACATTGGAAAAATAGGCTCTCTGGATCTTCATTCTCAGTAGAAACACTAACGTGGAGAAAGGCTAAAGCAGGAAATGATTTTTTGCACCGAATCAGTTTTGTTGACTCCTCATGCTAAGGGCCGGATGAAGAATTCAATATCTTTAGAATTTCTTTCTAAGTAGAAATAATTTGGGATGGTTGAGAAGACCGAGGTTGCCATTCTTGATTGTCAATTTTCAATACTGAATATCTGAACCACTTTTGTTCGCCTTCCAGCTATTTTTGTTTGACAAAACTATGTGAATGGCAATGCCATTGCCAACTAACGAATCTGGAGGGGTGGGGCGTGGGGGAGACAACGAGTTATCCAGAGATCCACTCATCTTCCCAAGAAGAAATATTGTCACTCTTGTGGTTTCACAAAGATGTTATATTCGACAAGAATCTCCTAGGACTTCTTTACTTAAGACCTCTTCTTTTGGCACAACCAATCTCCCTTAAGAATCTCATAAGTCATACTTGCAACCTCATATTTGCACACTAGAGTTCTTTGCTGCAGTCACTTGGGAAAAAATTTCTACCATGTAGATGCAACCACCACTTTTTTCTGTATCAAATTATCTTGAACCTAAACCTCTAACGATCAAATGAATTATTGAACTCCATTGAATAAAGTGAATTCCTCCTTCAGTTCATAGCTACCTTTGTATGGTCATTCATACTTTTCTCTCGTCTTCCCATGGGTACATCCTTTTTGAAAGGAATGAAATTTCTTCTTAAATATATATAAGTCGACGCTCATTCTTCTTGCACGTATGAATGGGAAGCTTGTGATTAAATTTAAAAAAAACTGCAGATGTGTGTGGTACGAGAGCATATTGCCTTGTCATAGGGCCACACACTCCCTCTTTGTCCATTCTTATGCCAGTCTCTGAGACTGGATTTTGGTAGTTTTCTGCTCCACTTATTTTATGCATTTTTTTTCTATGCAAGTAAGACAAAGGAAGAATTCTGGATCTCAGTTATCCAATCAGATATGCAGATAAACTCCATTCTTTGTCCTAGGAGTAAATTTCTTTTTCACTGTTCCCATATCTAGAAAAACTAATGAATGGGGATACCCATGTCTTACCTCTTTAAATTGAAAAGGCAGAATGCTTGCACTAATGTTTACTTGTTTGCTTACCTTGATGCCTGATGGGGTCACCATTTTTTACGTTGCTGTGACTAATGTGATGACGATGATCTAGTTCAATTGATTTGACTTTTTGATTATCAGGTGGGGCCTTCCACATTTTTCAGCTCAAAACAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAAGATTGTCAGAGGAGGACAATAGGCTTTTACTCTGACATTGTTTGCAACTAG ATGCTTATTACTTGCTCAACGCCCTCTCTTACCACCTCCGCCCATTCTCTTTCTTACAGGGCATTTTCAGGATGTGCAACATCAAGAGCTTTCATAACTCAAACCAAGCAAGTACAGCGCTACTGCTCATGTCAGAGTTTCAATCACAGCAGCGAAGAGAATTCTTATATATCATTATCCAATGAGAATTCCAGGCGAAAGATTCTCCTTTTTTTCTTATCAACTACAGCTTTATTTCCCACTCGGCATTCTTCTGCCAAGACAAAGAATAAGAATCCATACGATGAAAGACGCTTACTAGAGCAAAACAAACGGAGACAAAAAGAAAATAATGCTCCTGTCGACTTTCCAAGCTTTGTCAGGGAAGGTTTCGAGGTTAAGGTAATAGCACCAGAGTCCTATGTCAAACGTGACTCTGGGCTCATATATTGGGATATCGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTGATCTTTCACTATGTTGGCTATAATGAATCTGGTCGTCGAATTGATAGCACATACTTACAGGGTTCTCCTGCCAGAATCCGTGTGGGCACAAATGCATTGGTCCCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAAAGGAGAATAATAATCCCACCAGAACTTGGACCACCTGTGGGGCCTTCCACATTTTTCAGCTCAAAACAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAAGATTGTCAGAGGAGGACAATAGGCTTTTACTCTGACATTGTTTGCAACTAG ATGCTTATTACTTGCTCAACGCCCTCTCTTACCACCTCCGCCCATTCTCTTTCTTACAGGGCATTTTCAGGATGTGCAACATCAAGAGCTTTCATAACTCAAACCAAGCAAGTACAGCGCTACTGCTCATGTCAGAGTTTCAATCACAGCAGCGAAGAGAATTCTTATATATCATTATCCAATGAGAATTCCAGGCGAAAGATTCTCCTTTTTTTCTTATCAACTACAGCTTTATTTCCCACTCGGCATTCTTCTGCCAAGACAAAGAATAAGAATCCATACGATGAAAGACGCTTACTAGAGCAAAACAAACGGAGACAAAAAGAAAATAATGCTCCTGTCGACTTTCCAAGCTTTGTCAGGGAAGGTTTCGAGGTTAAGGTAATAGCACCAGAGTCCTATGTCAAACGTGACTCTGGGCTCATATATTGGGATATCGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTGATCTTTCACTATGTTGGCTATAATGAATCTGGTCGTCGAATTGATAGCACATACTTACAGGGTTCTCCTGCCAGAATCCGTGTGGGCACAAATGCATTGGTCCCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAAAGGAGAATAATAATCCCACCAGAACTTGGACCACCTGTGGGGCCTTCCACATTTTTCAGCTCAAAACAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAAGATTGTCAGAGGAGGACAATAGGCTTTTACTCTGACATTGTTTGCAACTAG MLITCSTPSLTTSAHSLSYRAFSGCATSRAFITQTKQVQRYCSCQSFNHSSEENSYISLSNENSRRKILLFFLSTTALFPTRHSSAKTKNKNPYDERRLLEQNKRRQKENNAPVDFPSFVREGFEVKVIAPESYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN* Homology
BLAST of Chy6G105800.1 vs. ExPASy Swiss-Prot
Match: Q0WRJ7 (Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP20-2 PE=1 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 1.9e-83 Identity = 151/199 (75.88%), Postives = 173/199 (86.93%), Query Frame = 0
BLAST of Chy6G105800.1 vs. ExPASy Swiss-Prot
Match: P65765 (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O157:H7 OX=83334 GN=fkpA PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.7e-15 Identity = 45/122 (36.89%), Postives = 70/122 (57.38%), Query Frame = 0
BLAST of Chy6G105800.1 vs. ExPASy Swiss-Prot
Match: P65764 (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=fkpA PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.7e-15 Identity = 45/122 (36.89%), Postives = 70/122 (57.38%), Query Frame = 0
BLAST of Chy6G105800.1 vs. ExPASy Swiss-Prot
Match: P45523 (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli (strain K12) OX=83333 GN=fkpA PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.7e-15 Identity = 45/122 (36.89%), Postives = 70/122 (57.38%), Query Frame = 0
BLAST of Chy6G105800.1 vs. ExPASy Swiss-Prot
Match: O22870 (Peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP16-3 PE=1 SV=2) HSP 1 Score: 80.9 bits (198), Expect = 2.4e-14 Identity = 63/200 (31.50%), Postives = 90/200 (45.00%), Query Frame = 0
BLAST of Chy6G105800.1 vs. ExPASy TrEMBL
Match: A0A0A0L5Q7 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_3G118090 PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 1.5e-144 Identity = 258/260 (99.23%), Postives = 260/260 (100.00%), Query Frame = 0
BLAST of Chy6G105800.1 vs. ExPASy TrEMBL
Match: A0A1S3AVI8 (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103483136 PE=4 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 3.0e-137 Identity = 249/260 (95.77%), Postives = 253/260 (97.31%), Query Frame = 0
BLAST of Chy6G105800.1 vs. ExPASy TrEMBL
Match: A0A6J1IWW5 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111479210 PE=4 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 5.7e-128 Identity = 235/260 (90.38%), Postives = 241/260 (92.69%), Query Frame = 0
BLAST of Chy6G105800.1 vs. ExPASy TrEMBL
Match: A0A6J1E9D1 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111431911 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 1.1e-126 Identity = 235/260 (90.38%), Postives = 239/260 (91.92%), Query Frame = 0
BLAST of Chy6G105800.1 vs. ExPASy TrEMBL
Match: A0A6J1DHQ6 (Peptidylprolyl isomerase OS=Momordica charantia OX=3673 GN=LOC111021016 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.4e-120 Identity = 221/260 (85.00%), Postives = 234/260 (90.00%), Query Frame = 0
BLAST of Chy6G105800.1 vs. NCBI nr
Match: XP_004133781.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis sativus] >KGN56374.1 hypothetical protein Csa_010638 [Cucumis sativus]) HSP 1 Score: 517 bits (1332), Expect = 6.08e-185 Identity = 258/260 (99.23%), Postives = 260/260 (100.00%), Query Frame = 0
BLAST of Chy6G105800.1 vs. NCBI nr
Match: XP_038891578.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X3 [Benincasa hispida]) HSP 1 Score: 494 bits (1273), Expect = 5.79e-176 Identity = 248/260 (95.38%), Postives = 253/260 (97.31%), Query Frame = 0
BLAST of Chy6G105800.1 vs. NCBI nr
Match: XP_008437821.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis melo]) HSP 1 Score: 493 bits (1269), Expect = 2.44e-175 Identity = 249/260 (95.77%), Postives = 253/260 (97.31%), Query Frame = 0
BLAST of Chy6G105800.1 vs. NCBI nr
Match: XP_038891581.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X4 [Benincasa hispida]) HSP 1 Score: 490 bits (1262), Expect = 2.65e-174 Identity = 248/260 (95.38%), Postives = 253/260 (97.31%), Query Frame = 0
BLAST of Chy6G105800.1 vs. NCBI nr
Match: XP_038891572.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 468 bits (1204), Expect = 2.28e-165 Identity = 231/240 (96.25%), Postives = 235/240 (97.92%), Query Frame = 0
BLAST of Chy6G105800.1 vs. TAIR 10
Match: AT3G60370.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 310.5 bits (794), Expect = 1.3e-84 Identity = 151/199 (75.88%), Postives = 173/199 (86.93%), Query Frame = 0
BLAST of Chy6G105800.1 vs. TAIR 10
Match: AT2G43560.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 80.9 bits (198), Expect = 1.7e-15 Identity = 63/200 (31.50%), Postives = 90/200 (45.00%), Query Frame = 0
BLAST of Chy6G105800.1 vs. TAIR 10
Match: AT4G19830.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 72.4 bits (176), Expect = 6.1e-13 Identity = 46/158 (29.11%), Postives = 71/158 (44.94%), Query Frame = 0
BLAST of Chy6G105800.1 vs. TAIR 10
Match: AT4G25340.1 (FK506 BINDING PROTEIN 53 ) HSP 1 Score: 70.5 bits (171), Expect = 2.3e-12 Identity = 52/201 (25.87%), Postives = 96/201 (47.76%), Query Frame = 0
BLAST of Chy6G105800.1 vs. TAIR 10
Match: AT5G13410.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 68.6 bits (166), Expect = 8.7e-12 Identity = 38/118 (32.20%), Postives = 57/118 (48.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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