Chy4G085730.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy4G085730.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	dof zinc finger protein DOF3.5
Location	chrH04: 24742847 .. 24743629 (+)
Sequence length	783
RNA-Seq Expression	Chy4G085730.1
Synteny	Chy4G085730.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGAGGATGGAAACCTATGGTGGAAATATCACCAAATTGTCCAAGGTGTGGCTCTTCCAATACTAAGTTCTGTTATTACAACAACTATAGCCTTACCCAGCCTCGCTACTTTTGCAAAGGCTGTCGTCGCTATTGGACCAAAGGCGGTTCCCTCCGTAATGTTCCCGTCGGTGGTGGTTGTCGGAAGAATCGACGTTCGCCGAAGCCGTTAACCCTAACCCCATCTCCCTCAAACCCTAAATTTCACCACACTAACGATAGTGATTACCAACGATACCACTGTGGTCTCTCTGACACCGACGTATCACCAACCATCGATTTGGCAGTCGTCTACGCCAATTTTGTGAACCAGAAACCAGACACGACTGAAACTATACCAACCTCGAACGCAGCTAGCCACTTTCCTGTTTCCGGTGAGAGTGGGGTGGTTGGATGTGGGAATTTTTGTGAGTTTTCCATGCAGGAATGTGGATTGGGGGCCAATGGTTACAGAGTGGGAGGTGGTTGCTTTGGGTTAGAGAAGAGTAATAATAATAATGAAGATCAAGTGGATAACATTGAAGTGGTGGCGCGTGAGCTTCAATTGCCGCCTTTGCCGGGGGAGGACATGGTGGAAGCATGGGGGAATTCTATGATAATGGTGAATAATCATCATCGTTTGCAACCAACAAGAGTAGAAATGTTCGAAGACCCAAATTTGCTGAGTGGTAATTGGAGCCCTATTGATCTGTCTAATTATGATACATTCTCAAAAGGCTTAACAAATATACATATATAA

mRNA sequence

ATGGAGAGAGGATGGAAACCTATGGTGGAAATATCACCAAATTGTCCAAGGTGTGGCTCTTCCAATACTAAGTTCTGTTATTACAACAACTATAGCCTTACCCAGCCTCGCTACTTTTGCAAAGGCTGTCGTCGCTATTGGACCAAAGGCGGTTCCCTCCGTAATGTTCCCGTCGGTGGTGGTTGTCGGAAGAATCGACGTTCGCCGAAGCCGTTAACCCTAACCCCATCTCCCTCAAACCCTAAATTTCACCACACTAACGATAGTGATTACCAACGATACCACTGTGGTCTCTCTGACACCGACGTATCACCAACCATCGATTTGGCAGTCGTCTACGCCAATTTTGTGAACCAGAAACCAGACACGACTGAAACTATACCAACCTCGAACGCAGCTAGCCACTTTCCTGTTTCCGGTGAGAGTGGGGTGGTTGGATGTGGGAATTTTTGTGAGTTTTCCATGCAGGAATGTGGATTGGGGGCCAATGGTTACAGAGTGGGAGGTGGTTGCTTTGGGTTAGAGAAGAGTAATAATAATAATGAAGATCAAGTGGATAACATTGAAGTGGTGGCGCGTGAGCTTCAATTGCCGCCTTTGCCGGGGGAGGACATGGTGGAAGCATGGGGGAATTCTATGATAATGGTGAATAATCATCATCGTTTGCAACCAACAAGAGTAGAAATGTTCGAAGACCCAAATTTGCTGAGTGGTAATTGGAGCCCTATTGATCTGTCTAATTATGATACATTCTCAAAAGGCTTAACAAATATACATATATAA

Coding sequence (CDS)

ATGGAGAGAGGATGGAAACCTATGGTGGAAATATCACCAAATTGTCCAAGGTGTGGCTCTTCCAATACTAAGTTCTGTTATTACAACAACTATAGCCTTACCCAGCCTCGCTACTTTTGCAAAGGCTGTCGTCGCTATTGGACCAAAGGCGGTTCCCTCCGTAATGTTCCCGTCGGTGGTGGTTGTCGGAAGAATCGACGTTCGCCGAAGCCGTTAACCCTAACCCCATCTCCCTCAAACCCTAAATTTCACCACACTAACGATAGTGATTACCAACGATACCACTGTGGTCTCTCTGACACCGACGTATCACCAACCATCGATTTGGCAGTCGTCTACGCCAATTTTGTGAACCAGAAACCAGACACGACTGAAACTATACCAACCTCGAACGCAGCTAGCCACTTTCCTGTTTCCGGTGAGAGTGGGGTGGTTGGATGTGGGAATTTTTGTGAGTTTTCCATGCAGGAATGTGGATTGGGGGCCAATGGTTACAGAGTGGGAGGTGGTTGCTTTGGGTTAGAGAAGAGTAATAATAATAATGAAGATCAAGTGGATAACATTGAAGTGGTGGCGCGTGAGCTTCAATTGCCGCCTTTGCCGGGGGAGGACATGGTGGAAGCATGGGGGAATTCTATGATAATGGTGAATAATCATCATCGTTTGCAACCAACAAGAGTAGAAATGTTCGAAGACCCAAATTTGCTGAGTGGTAATTGGAGCCCTATTGATCTGTCTAATTATGATACATTCTCAAAAGGCTTAACAAATATACATATATAA

Protein sequence

MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRSPKPLTLTPSPSNPKFHHTNDSDYQRYHCGLSDTDVSPTIDLAVVYANFVNQKPDTTETIPTSNAASHFPVSGESGVVGCGNFCEFSMQECGLGANGYRVGGGCFGLEKSNNNNEDQVDNIEVVARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLLSGNWSPIDLSNYDTFSKGLTNIHI*

Homology

[Close]

BLAST of Chy4G085730.1 vs. ExPASy Swiss-Prot
Match: Q9SVC5 (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 7.1e-43
Identity = 110/269 (40.89%), Postives = 150/269 (55.76%), Query Frame = 0


Query: 5   WKP----MVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 64
           W+P      EI+P+CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 65  GCRKNRRSPKPLTLTPSPSNPKFHHTNDSDYQRYHCGLSDTDVSPTIDLAVVYANFVNQK 124
           GCRK+RR PK    + S +N K   T +S         +    SP+IDLA+VYANF+N K
Sbjct: 73  GCRKSRR-PK----SSSGNNTKTSLTANSG--------NPGGGSPSIDLALVYANFLNPK 132

Query: 125 PDTTETIPTSN---AASHFPVSGESGVVGCGNFCEFSMQECGLGANGYRVGGGCFGLEKS 184
           PD  E+I   N   A + F V   +G          SM                + ++ +
Sbjct: 133 PD--ESILQENCDLATTDFLVDNPTGT---------SMDP-------------SWSMDIN 192

Query: 185 NNNNEDQVDNIEVVAREL---QLPPLPGEDMVE-----AWGNSMIMVNNHHRLQPTRVEM 244
           + +++  ++ +E +  E     LPP PGE+++       W +++++ +NH  +  T V+ 
Sbjct: 193 DGHHDHYINPVEHIVEECGYNGLPPFPGEELLSLDTNGVWSDALLIGHNHVDVGVTPVQA 244

Query: 245 FEDP------------NLLSGNWSPIDLS 247
             +P            NLL G+WSP D +
Sbjct: 253 VHEPVVHFADESNDSTNLLFGSWSPFDFT 244

[Close]

BLAST of Chy4G085730.1 vs. ExPASy Swiss-Prot
Match: Q43385 (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 3.8e-28
Identity = 58/74 (78.38%), Postives = 61/74 (82.43%), Query Frame = 0


Query: 14  NCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRSPKPLT 73
           NCPRC S+NTKFCYYNNYSLTQPRYFCKGCRRYWT+GGSLRNVPVGG  RKN+RS  PL 
Sbjct: 75  NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSTPLA 134

Query: 74  LTPSPSNPKFHHTN 88
              SPSNPK    N
Sbjct: 135 ---SPSNPKLPDLN 145

[Close]

BLAST of Chy4G085730.1 vs. ExPASy Swiss-Prot
Match: Q84TE9 (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.2e-27
Identity = 73/196 (37.24%), Postives = 104/196 (53.06%), Query Frame = 0


Query: 10  EISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRS- 69
           E++  CPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTKGG+LRN+PVGGGCRKN+RS 
Sbjct: 52  ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRST 111

Query: 70  ---PKPLTLTPSPSNPKFHHTNDSDYQRYHCGLSDTDVSPTIDLAVVYANFVNQKPDTTE 129
               + L  TP P++      + + +  Y         +  IDL++ +A    Q P ++ 
Sbjct: 112 SSAARSLRTTPEPASHDGKVFSAAGFNGY-------SNNEHIDLSLAFALLNKQHPGSSS 171

Query: 130 TIPTSNAASHFPVSGESGVVGCGNFCEFSMQECGLGANG------------YRVGGGCFG 188
            +   +       S   G+ G     E +    G G++G            +++ G  FG
Sbjct: 172 QLGFHSELGSSHQSDMEGMFGTSQQKENATYAFGNGSSGLGDPSRVLWGFPWQMNGESFG 231

[Close]

BLAST of Chy4G085730.1 vs. ExPASy Swiss-Prot
Match: Q8LAP8 (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 5.5e-27
Identity = 52/67 (77.61%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 2   ERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGG 61
           ER  +P  + + NCPRC S+NTKFCYYNNYSLTQPRYFCKGCRRYWT+GGSLRN+PVGGG
Sbjct: 42  ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101

Query: 62  CRKNRRS 69
            RKN+RS
Sbjct: 102 SRKNKRS 108

[Close]

BLAST of Chy4G085730.1 vs. ExPASy Swiss-Prot
Match: P68349 (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.2e-27
Identity = 64/126 (50.79%), Postives = 79/126 (62.70%), Query Frame = 0


Query: 12  SPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRSPKP 71
           +P CPRC SSNTKFCYYNNYSL+QPRYFCKGCRRYWTKGGSLRN+PVGGGCRK  RS + 
Sbjct: 37  APACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRSRSRQ- 96

Query: 72  LTLTPSPSNPKF--HHTNDSDYQRYHCGLSDTDVSPTIDLAVVYANFV-NQKPDTTETIP 131
                  S+ +F  +            G   +     IDLA V+A +V ++ P +T+   
Sbjct: 97  ------NSHKRFGRNENRPDGLINQDDGFQSSPPGSDIDLAAVFAQYVTDRSPSSTDNTT 155

Query: 132 TSNAAS 135
            S+  S
Sbjct: 157 GSDQDS 155

[Close]

BLAST of Chy4G085730.1 vs. ExPASy TrEMBL
Match: A0A5D3DP00 (Dof zinc finger protein DOF3.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004620 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 4.7e-146
Identity = 245/264 (92.80%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
           MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60

Query: 61  GCRKNRRSPKPLTLTPSPSNPKFHHTNDSDYQRYHCGLSDTDVSPTIDLAVVYANFVNQK 120
           GCRKNRRSPKPLTLTPSPSNPK HHTNDSDYQR+HC LS +DVSPTIDLAVVYANFVNQK
Sbjct: 61  GCRKNRRSPKPLTLTPSPSNPKLHHTNDSDYQRHHCDLSGSDVSPTIDLAVVYANFVNQK 120

Query: 121 PDTTETIP----TSNAASHFPVSGESGVVGCGNFCEFSMQECGLGANGYRVGGGCFGLEK 180
           PDT ETIP    TSNAA HFPVSGESGVVGCGNFCEFSMQECGLGA+ Y+VGGGCFGLE+
Sbjct: 121 PDTRETIPTTNTTSNAAGHFPVSGESGVVGCGNFCEFSMQECGLGASDYQVGGGCFGLEE 180

Query: 181 SNNNNEDQVDNIEVVARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLL 240
           SNNNNE+QVDNIEV ARELQLPPLPGED+VEAWGNSMIMVNNHHRLQPTRVEMFEDPNLL
Sbjct: 181 SNNNNENQVDNIEVAARELQLPPLPGEDVVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLL 240

Query: 241 SGNWSPIDLSNYDTFSKGLTNIHI 261
           SGNWSPIDLSNYDTFSKGLTN+HI
Sbjct: 241 SGNWSPIDLSNYDTFSKGLTNMHI 264

[Close]

BLAST of Chy4G085730.1 vs. ExPASy TrEMBL
Match: A0A1S3B959 (dof zinc finger protein DOF3.5 OS=Cucumis melo OX=3656 GN=LOC103487154 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 4.7e-146
Identity = 245/264 (92.80%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
           MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60

Query: 61  GCRKNRRSPKPLTLTPSPSNPKFHHTNDSDYQRYHCGLSDTDVSPTIDLAVVYANFVNQK 120
           GCRKNRRSPKPLTLTPSPSNPK HHTNDSDYQR+HC LS +DVSPTIDLAVVYANFVNQK
Sbjct: 61  GCRKNRRSPKPLTLTPSPSNPKLHHTNDSDYQRHHCDLSGSDVSPTIDLAVVYANFVNQK 120

Query: 121 PDTTETIP----TSNAASHFPVSGESGVVGCGNFCEFSMQECGLGANGYRVGGGCFGLEK 180
           PDT ETIP    TSNAA HFPVSGESGVVGCGNFCEFSMQECGLGA+ Y+VGGGCFGLE+
Sbjct: 121 PDTRETIPTTNTTSNAAGHFPVSGESGVVGCGNFCEFSMQECGLGASDYQVGGGCFGLEE 180

Query: 181 SNNNNEDQVDNIEVVARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLL 240
           SNNNNE+QVDNIEV ARELQLPPLPGED+VEAWGNSMIMVNNHHRLQPTRVEMFEDPNLL
Sbjct: 181 SNNNNENQVDNIEVAARELQLPPLPGEDVVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLL 240

Query: 241 SGNWSPIDLSNYDTFSKGLTNIHI 261
           SGNWSPIDLSNYDTFSKGLTN+HI
Sbjct: 241 SGNWSPIDLSNYDTFSKGLTNMHI 264

[Close]

BLAST of Chy4G085730.1 vs. ExPASy TrEMBL
Match: A0A0A0LGT7 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G782640 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.2e-143
Identity = 242/260 (93.08%), Postives = 247/260 (95.00%), Query Frame = 0


Query: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
           MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60

Query: 61  GCRKNRRSPKPLTLTPSPSNPKFHHTNDSDYQRYHCGLSDTDVSPTIDLAVVYANFVNQK 120
           GCRKNRRSPKPLTLTPS SNPKFHHTNDSDYQRYHCGLSD+DVSPTIDLAVVYANFVNQK
Sbjct: 61  GCRKNRRSPKPLTLTPSSSNPKFHHTNDSDYQRYHCGLSDSDVSPTIDLAVVYANFVNQK 120

Query: 121 PDTTETIPTSNAASHFPVSGESGVVGCGNFCEFSMQECGLGANGYRVGGGCFGLEKSNNN 180
           PDT ETIPTSNAA HFPVS +S VVGCGNFCEFSMQECGLGAN Y+VGGGCFGLE+S+NN
Sbjct: 121 PDTPETIPTSNAAGHFPVSVQSRVVGCGNFCEFSMQECGLGANDYQVGGGCFGLEESSNN 180

Query: 181 NEDQVDNIEVVARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLLSGNW 240
           NE Q     V ARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLLSGNW
Sbjct: 181 NESQ-----VAARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLLSGNW 240

Query: 241 SPIDLSNYDTFSKGLTNIHI 261
           SPIDLSNYDTFSKGLTNIHI
Sbjct: 241 SPIDLSNYDTFSKGLTNIHI 255

[Close]

BLAST of Chy4G085730.1 vs. ExPASy TrEMBL
Match: A0A6J1F338 (dof zinc finger protein DOF3.5 OS=Cucurbita moschata OX=3662 GN=LOC111441744 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.5e-101
Identity = 186/257 (72.37%), Postives = 208/257 (80.93%), Query Frame = 0


Query: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
           M+RGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVP+GG
Sbjct: 1   MDRGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPIGG 60

Query: 61  GCRKNRRSPKPLTLTPSPSNPKFHHTNDSDYQRYHCGLSDTDVSPTIDLAVVYANFVNQK 120
           GCR++RR  KPLTL+PSPSNPKFHHTN +    ++  L D DVSP IDLAVVYANFVNQK
Sbjct: 61  GCRRHRRPAKPLTLSPSPSNPKFHHTNGTSSLHHNHRLPDPDVSPVIDLAVVYANFVNQK 120

Query: 121 PDTTETIPTSNAASHFPVSGESGVVGCGNFCEFSMQECGLGANGYRVGGGCFGLEKSNNN 180
             T  TIP  +  S+   +GES     GN CEFSMQECGLG N Y+V  GCFGLE+   N
Sbjct: 121 LTTPGTIPADSTTSN--AAGES-----GNLCEFSMQECGLGGNEYQV-PGCFGLEE---N 180

Query: 181 NEDQVDNIEVVARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMF----EDPNLL 240
           +E+QVDNIE+ ARELQLPPLPGE+MV +W N MIM  NHH LQPTRVE+F    +DP LL
Sbjct: 181 SENQVDNIELAARELQLPPLPGEEMVGSWANPMIM--NHHHLQPTRVEVFGMETQDPTLL 240

Query: 241 SGNWSPIDLSNYDTFSK 254
            GNWSPIDLSNY+TFS+
Sbjct: 241 GGNWSPIDLSNYETFSR 244

[Close]

BLAST of Chy4G085730.1 vs. ExPASy TrEMBL
Match: A0A6J1IYA6 (dof zinc finger protein DOF3.5-like OS=Cucurbita maxima OX=3661 GN=LOC111481739 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 2.0e-96
Identity = 180/251 (71.71%), Postives = 201/251 (80.08%), Query Frame = 0


Query: 8   MVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRR 67
           MVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVP+GGGCR++RR
Sbjct: 1   MVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRRHRR 60

Query: 68  SPKPLTLTPSPSNPKFHHTNDSDYQRYHCGLSDTDVSPTIDLAVVYANFVNQKPDTTETI 127
             KPLTL+PSPSNPKFHH+N +    ++  L D+DVSP IDLAVVYANFVNQK  T  TI
Sbjct: 61  PAKPLTLSPSPSNPKFHHSNGTSSLHHNHRLHDSDVSPVIDLAVVYANFVNQKLTTPGTI 120

Query: 128 PTSNAASHFPVSGESGVVGCGNFCEFSMQECGLGANGYRVGGGCFGLEKSNNNNEDQVDN 187
           P  +  S+   +GES     GN C FSMQECGLG N Y+V  GCFGLE+   N+++QVDN
Sbjct: 121 PADSTTSN--AAGES-----GNLCAFSMQECGLGGNEYQV-AGCFGLEE---NSDNQVDN 180

Query: 188 IEVVARELQLPPLPGEDMVEAWGNSMIMVN-NHHRLQPTRVEMF----EDPNLLSGNWSP 247
           IEV ARELQLPPLPGE+MV  W N MIMVN  HH LQPTRVE+F    EDP LL GNWSP
Sbjct: 181 IEVAARELQLPPLPGEEMVGGWANPMIMVNRRHHHLQPTRVEVFGMETEDPTLLGGNWSP 240

Query: 248 IDLSNYDTFSK 254
           IDLSNY+TFS+
Sbjct: 241 IDLSNYETFSR 240

[Close]

BLAST of Chy4G085730.1 vs. NCBI nr
Match: XP_008443597.1 (PREDICTED: dof zinc finger protein DOF3.5 [Cucumis melo] >KAA0043808.1 dof zinc finger protein DOF3.5 [Cucumis melo var. makuwa] >TYK25324.1 dof zinc finger protein DOF3.5 [Cucumis melo var. makuwa])

HSP 1 Score: 524 bits (1349), Expect = 1.80e-187
Identity = 245/264 (92.80%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
           MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60

Query: 61  GCRKNRRSPKPLTLTPSPSNPKFHHTNDSDYQRYHCGLSDTDVSPTIDLAVVYANFVNQK 120
           GCRKNRRSPKPLTLTPSPSNPK HHTNDSDYQR+HC LS +DVSPTIDLAVVYANFVNQK
Sbjct: 61  GCRKNRRSPKPLTLTPSPSNPKLHHTNDSDYQRHHCDLSGSDVSPTIDLAVVYANFVNQK 120

Query: 121 PDTTETIPT----SNAASHFPVSGESGVVGCGNFCEFSMQECGLGANGYRVGGGCFGLEK 180
           PDT ETIPT    SNAA HFPVSGESGVVGCGNFCEFSMQECGLGA+ Y+VGGGCFGLE+
Sbjct: 121 PDTRETIPTTNTTSNAAGHFPVSGESGVVGCGNFCEFSMQECGLGASDYQVGGGCFGLEE 180

Query: 181 SNNNNEDQVDNIEVVARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLL 240
           SNNNNE+QVDNIEV ARELQLPPLPGED+VEAWGNSMIMVNNHHRLQPTRVEMFEDPNLL
Sbjct: 181 SNNNNENQVDNIEVAARELQLPPLPGEDVVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLL 240

Query: 241 SGNWSPIDLSNYDTFSKGLTNIHI 260
           SGNWSPIDLSNYDTFSKGLTN+HI
Sbjct: 241 SGNWSPIDLSNYDTFSKGLTNMHI 264

[Close]

BLAST of Chy4G085730.1 vs. NCBI nr
Match: XP_004136713.1 (dof zinc finger protein DOF3.5 [Cucumis sativus])

HSP 1 Score: 514 bits (1325), Expect = 5.91e-184
Identity = 242/260 (93.08%), Postives = 247/260 (95.00%), Query Frame = 0


Query: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
           MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60

Query: 61  GCRKNRRSPKPLTLTPSPSNPKFHHTNDSDYQRYHCGLSDTDVSPTIDLAVVYANFVNQK 120
           GCRKNRRSPKPLTLTPS SNPKFHHTNDSDYQRYHCGLSD+DVSPTIDLAVVYANFVNQK
Sbjct: 61  GCRKNRRSPKPLTLTPSSSNPKFHHTNDSDYQRYHCGLSDSDVSPTIDLAVVYANFVNQK 120

Query: 121 PDTTETIPTSNAASHFPVSGESGVVGCGNFCEFSMQECGLGANGYRVGGGCFGLEKSNNN 180
           PDT ETIPTSNAA HFPVS +S VVGCGNFCEFSMQECGLGAN Y+VGGGCFGLE+S+NN
Sbjct: 121 PDTPETIPTSNAAGHFPVSVQSRVVGCGNFCEFSMQECGLGANDYQVGGGCFGLEESSNN 180

Query: 181 NEDQVDNIEVVARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLLSGNW 240
           NE QV      ARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLLSGNW
Sbjct: 181 NESQV-----AARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLLSGNW 240

Query: 241 SPIDLSNYDTFSKGLTNIHI 260
           SPIDLSNYDTFSKGLTNIHI
Sbjct: 241 SPIDLSNYDTFSKGLTNIHI 255

[Close]

BLAST of Chy4G085730.1 vs. NCBI nr
Match: KGN59356.2 (hypothetical protein Csa_000933 [Cucumis sativus])

HSP 1 Score: 489 bits (1260), Expect = 8.60e-174
Identity = 233/261 (89.27%), Postives = 240/261 (91.95%), Query Frame = 0


Query: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
           MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60

Query: 61  GCRKNRRSPKPLTLTPSPSNPKFHHTNDSDYQRYHCGLSDTDVSPTIDLAVVYANFVNQK 120
           GCRKNRRSPKPLTLTPS SNPKFHHTNDSDYQRYHCGLSD+DVSPTIDLAVVYANFVNQK
Sbjct: 61  GCRKNRRSPKPLTLTPSSSNPKFHHTNDSDYQRYHCGLSDSDVSPTIDLAVVYANFVNQK 120

Query: 121 PDTTETIPTSNAASHFPVSGESGVVGCGNFCEFSMQECGLGANGYRVGGGCFGLEKSNNN 180
           PDT ETIPTSNAA HFPVS +S VVGCGNFCEFSMQECGLGAN Y+VGGGCFGLE+S+NN
Sbjct: 121 PDTPETIPTSNAAGHFPVSVQSRVVGCGNFCEFSMQECGLGANDYQVGGGCFGLEESSNN 180

Query: 181 NEDQVDNIEVVARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLLSGNW 240
           NE QV      ARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLLSGNW
Sbjct: 181 NESQV-----AARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLLSGNW 240

Query: 241 SPIDLSNYDTFS----KGLTN 257
           SPIDL   D++S    KG TN
Sbjct: 241 SPIDLGMMDSYSENEKKGNTN 256

[Close]

BLAST of Chy4G085730.1 vs. NCBI nr
Match: XP_038903679.1 (dof zinc finger protein DOF3.5 [Benincasa hispida])

HSP 1 Score: 428 bits (1100), Expect = 1.20e-149
Identity = 210/263 (79.85%), Postives = 224/263 (85.17%), Query Frame = 0


Query: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
           MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60

Query: 61  GCRKNRRSPKPLTLTPSPSNPKFHHTN-DSDYQRYHCGLSDTDVSPTIDLAVVYANFVNQ 120
           GCRKNRRSPKPLTL  SPSNPKFHHTN DS Y R+H GL D +VSP IDLAVVYANFVN+
Sbjct: 61  GCRKNRRSPKPLTLASSPSNPKFHHTNNDSSYHRHHRGLPDPEVSPAIDLAVVYANFVNK 120

Query: 121 KPDTTETIPTS-----NAASHFPVSGESGVVGCGNFCEFSMQECGLGANGYRVGGGCFGL 180
           KPDT++T  T+     NA  HFPVSGESGV+GCGNFCEFSMQECGLG N Y+VG  CFGL
Sbjct: 121 KPDTSKTTLTAPNTTLNATGHFPVSGESGVIGCGNFCEFSMQECGLGTNDYQVGS-CFGL 180

Query: 181 EKSNNNNEDQVDNIEVVARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMF---- 240
           E+  NNNE QV      ARELQLPPLPGE+MV  WG  +IMVNNH+RLQPTRVEMF    
Sbjct: 181 EE--NNNEHQV-----AARELQLPPLPGEEMVGGWGGPLIMVNNHNRLQPTRVEMFGMET 240

Query: 241 EDPNLLSGNWSPIDLSNYDTFSK 253
           +DPNLLSGNWSPIDLSNYDTFS+
Sbjct: 241 QDPNLLSGNWSPIDLSNYDTFSR 255

[Close]

BLAST of Chy4G085730.1 vs. NCBI nr
Match: XP_023528880.1 (dof zinc finger protein DOF3.5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 376 bits (966), Expect = 2.21e-129
Identity = 184/257 (71.60%), Postives = 208/257 (80.93%), Query Frame = 0


Query: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
           M+RGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVP+GG
Sbjct: 1   MDRGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPIGG 60

Query: 61  GCRKNRRSPKPLTLTPSPSNPKFHHTNDSDYQRYHCGLSDTDVSPTIDLAVVYANFVNQK 120
           GCR++RR  KPLTL+PSPSNPKFHHTN +    ++  L D D+SP IDLAVVYANFVNQK
Sbjct: 61  GCRRHRRPAKPLTLSPSPSNPKFHHTNGTSSLHHNHRLPDPDMSPVIDLAVVYANFVNQK 120

Query: 121 PDTTETIPTSNAASHFPVSGESGVVGCGNFCEFSMQECGLGANGYRVGGGCFGLEKSNNN 180
             T  TI   +  S+   +GESG     N CEFSMQECGLG N Y+V G CFGLE+   N
Sbjct: 121 LTTPGTITADSTTSN--AAGESG-----NLCEFSMQECGLGGNEYQVAG-CFGLEE---N 180

Query: 181 NEDQVDNIEVVARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMF----EDPNLL 240
           +E+QVDNIEV ARELQLPPLPGE+MV  W NSMIM ++HH LQPTRVE+F    +DP L+
Sbjct: 181 SENQVDNIEVAARELQLPPLPGEEMVGGWANSMIMNHHHHHLQPTRVEVFGMETQDPTLV 240

Query: 241 SGNWSPIDLSNYDTFSK 253
            GNWSPIDLSNY+TFS+
Sbjct: 241 GGNWSPIDLSNYETFSR 246

[Close]

BLAST of Chy4G085730.1 vs. TAIR 10
Match: AT3G52440.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 175.6 bits (444), Expect = 5.1e-44
Identity = 110/269 (40.89%), Postives = 150/269 (55.76%), Query Frame = 0


Query: 5   WKP----MVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 64
           W+P      EI+P+CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 65  GCRKNRRSPKPLTLTPSPSNPKFHHTNDSDYQRYHCGLSDTDVSPTIDLAVVYANFVNQK 124
           GCRK+RR PK    + S +N K   T +S         +    SP+IDLA+VYANF+N K
Sbjct: 73  GCRKSRR-PK----SSSGNNTKTSLTANSG--------NPGGGSPSIDLALVYANFLNPK 132

Query: 125 PDTTETIPTSN---AASHFPVSGESGVVGCGNFCEFSMQECGLGANGYRVGGGCFGLEKS 184
           PD  E+I   N   A + F V   +G          SM                + ++ +
Sbjct: 133 PD--ESILQENCDLATTDFLVDNPTGT---------SMDP-------------SWSMDIN 192

Query: 185 NNNNEDQVDNIEVVAREL---QLPPLPGEDMVE-----AWGNSMIMVNNHHRLQPTRVEM 244
           + +++  ++ +E +  E     LPP PGE+++       W +++++ +NH  +  T V+ 
Sbjct: 193 DGHHDHYINPVEHIVEECGYNGLPPFPGEELLSLDTNGVWSDALLIGHNHVDVGVTPVQA 244

Query: 245 FEDP------------NLLSGNWSPIDLS 247
             +P            NLL G+WSP D +
Sbjct: 253 VHEPVVHFADESNDSTNLLFGSWSPFDFT 244

[Close]

BLAST of Chy4G085730.1 vs. TAIR 10
Match: AT3G61850.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-29
Identity = 58/74 (78.38%), Postives = 61/74 (82.43%), Query Frame = 0


Query: 14  NCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRSPKPLT 73
           NCPRC S+NTKFCYYNNYSLTQPRYFCKGCRRYWT+GGSLRNVPVGG  RKN+RS  PL 
Sbjct: 75  NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSTPLA 134

Query: 74  LTPSPSNPKFHHTN 88
              SPSNPK    N
Sbjct: 135 ---SPSNPKLPDLN 145

[Close]

BLAST of Chy4G085730.1 vs. TAIR 10
Match: AT3G61850.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-29
Identity = 58/74 (78.38%), Postives = 61/74 (82.43%), Query Frame = 0


Query: 14  NCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRSPKPLT 73
           NCPRC S+NTKFCYYNNYSLTQPRYFCKGCRRYWT+GGSLRNVPVGG  RKN+RS  PL 
Sbjct: 63  NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSTPLA 122

Query: 74  LTPSPSNPKFHHTN 88
              SPSNPK    N
Sbjct: 123 ---SPSNPKLPDLN 133

[Close]

BLAST of Chy4G085730.1 vs. TAIR 10
Match: AT3G61850.3 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-29
Identity = 58/74 (78.38%), Postives = 61/74 (82.43%), Query Frame = 0


Query: 14  NCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRSPKPLT 73
           NCPRC S+NTKFCYYNNYSLTQPRYFCKGCRRYWT+GGSLRNVPVGG  RKN+RS  PL 
Sbjct: 63  NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSTPLA 122

Query: 74  LTPSPSNPKFHHTN 88
              SPSNPK    N
Sbjct: 123 ---SPSNPKLPDLN 133

[Close]

BLAST of Chy4G085730.1 vs. TAIR 10
Match: AT3G61850.4 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-29
Identity = 58/74 (78.38%), Postives = 61/74 (82.43%), Query Frame = 0


Query: 14  NCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRSPKPLT 73
           NCPRC S+NTKFCYYNNYSLTQPRYFCKGCRRYWT+GGSLRNVPVGG  RKN+RS  PL 
Sbjct: 75  NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSTPLA 134

Query: 74  LTPSPSNPKFHHTN 88
              SPSNPK    N
Sbjct: 135 ---SPSNPKLPDLN 145

The following BLAST results are available for this feature:

BLAST of Chy4G085730.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVC5	7.1e-43	40.89	Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV...	[more]
Q43385	3.8e-28	78.38	Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV...	[more]
Q84TE9	4.2e-27	37.24	Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV...	[more]
Q8LAP8	5.5e-27	77.61	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV...	[more]
P68349	7.2e-27	50.79	Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV...	[more]

BLAST of Chy4G085730.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DP00	4.7e-146	92.80	Dof zinc finger protein DOF3.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B959	4.7e-146	92.80	dof zinc finger protein DOF3.5 OS=Cucumis melo OX=3656 GN=LOC103487154 PE=4 SV=1	[more]
A0A0A0LGT7	2.2e-143	93.08	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G782640 PE...	[more]
A0A6J1F338	3.5e-101	72.37	dof zinc finger protein DOF3.5 OS=Cucurbita moschata OX=3662 GN=LOC111441744 PE=...	[more]
A0A6J1IYA6	2.0e-96	71.71	dof zinc finger protein DOF3.5-like OS=Cucurbita maxima OX=3661 GN=LOC111481739 ...	[more]

BLAST of Chy4G085730.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443597.1	1.80e-187	92.80	PREDICTED: dof zinc finger protein DOF3.5 [Cucumis melo] >KAA0043808.1 dof zinc ...	[more]
XP_004136713.1	5.91e-184	93.08	dof zinc finger protein DOF3.5 [Cucumis sativus]	[more]
KGN59356.2	8.60e-174	89.27	hypothetical protein Csa_000933 [Cucumis sativus]	[more]
XP_038903679.1	1.20e-149	79.85	dof zinc finger protein DOF3.5 [Benincasa hispida]	[more]
XP_023528880.1	2.21e-129	71.60	dof zinc finger protein DOF3.5 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy4G085730.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52440.1	5.1e-44	40.89	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.1	2.7e-29	78.38	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.2	2.7e-29	78.38	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.3	2.7e-29	78.38	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.4	2.7e-29	78.38	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 174..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..88
None	No IPR available	PANTHER	PTHR31992:SF131	DOF DOMAIN ZINC FINGER PROTEIN	coord: 178..251
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 1..181 coord: 178..251
None	No IPR available	PANTHER	PTHR31992:SF131	DOF DOMAIN ZINC FINGER PROTEIN	coord: 1..181
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 14..67 e-value: 2.8E-31 score: 107.4
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 15..51
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 13..67 score: 28.676903

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy4G085730	Chy4G085730	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy4G085730.1.exon1	Chy4G085730.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy4G085730.1.cds1	Chy4G085730.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy4G085730.1	Chy4G085730.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding