Chy4G077840.1 (mRNA) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAACATCAAGTTTGTTGAAATTGAAATTCCCAAATTTTATTGCTGTAATATGGATAAAAAAATAGTTATTGAAGTAGAAACCACGTTTTCATCATAAATGGAAAATAGTAAATAAATTGAGAAATAAAAAAAAAAATTGAAAATTACCCTTTCTTTATGTATGACTTTGAATTTTGCTCCTTAGCTAACCTTCCAACAAAAGACGATCTATTCTATACAAATTTTAGAACATTTATGAAATGTGAAGTGTAAAATTAAAAATGAATATTCTAAAAACAAAGGATAAGTTTATGGGCACATATTTTGTAGATCTGGAATTGCGTTTGTGGGACTAAAAAACACCATTTTGATCGTCAGTTAAATCTAATTATTTATTAATTTATCTGCAATCACTTTTTAAATTGTTCTTATGCTCAAAACACCTTCACATTGTCATTAGCTTTAGATTTTTACTTTAAGAAAAATATTTAGCTTAATTAAAGGTTAATTTTTCATAAATGTAACAAAATATTGAAATATGTAAACCTGTGTAACAAAAATGAGAAGTTCATGAAGTCGATAAAATATTTTCATAAATTTTAAATTTTTCTTTGACATTTTAAACGATTCGTCACTTCTCTTTCTTCTTTTTTCTTGCAATTTATTCATCTTCTCTTCTAAGTTTCTTCAGCTCATCTTTTAAATTTTCATTCTTCTATTTTTATTCATTTCTCTTTTTTTCTTCTCGTTCCTCTTCCAGAATATCAAGGTAGTTTAAATATTACTTTGATATGATCTAAACGATCGCTTACCTAGTCAACAACATAAACGTTTAGCATTAATGTTAGCACGATCGTTTAGATTTGAAGCCCTTTTCGTATCGTTTAAAAAGAACTACACGATCGTGTGGATATGATCTAAACGATCGCTTATCATAGTCAACATGATAGTTTTTTTAGGTCAACATGGTTGCTTAGATTTTAAGTCCTTTTTTCATCGTTTAAGAAAACTACACGTTCATGTGAATATGATCTAAACGATCGCTTACCATAGTCAACAAATTGTTTAGGGTAATCAACATGATCATTTAGATTTGAAGCATTTTTCCCATCGTTAAAAAAACTACACAATCGTGTATAATTTTCTACACGATTGTGTATCATGATCGTTTAGAAGAGAGAATTATACACGCGCGTGTGGTCAATTCATCACGTGTTGATTGGGGCATTGGTATTTTTCATTATGGGCTTGTGGACTTTTTCCGTTTTCAAAATTGTTCTATGCAGTGTAAATATTTTGTCGATGTATTATATTTTTTAAAAATTTCCTTAATTAAACTTTTAAAATTATCATCTTATAGTAAGTTTGATATTAACATCAATAATCACAATTGAGATAGCATGTCTACTTAGCTTGCTAAGTTATAATGACTTATTAATTTTATCAAGTAAACATACATTTTTATGTAAAATTAAAAAAATTGCCACACTATTTTTACTACTTTTACTTTACGATTTTCTCTCTCTAAATATTGTTAATTATGAACAATGATTAAGTATATTGTAGGTTGCACTTTAATCTCCAATACAACTCTCTTTTATTTAAACAATAAAAAGGAAAAACATTTCAATTAGTCTTTGTAAAAAATTGTTAACCGACCCTCGGATTTTGGGTCAATTACACAGCTTTCCCAAACAGAAAATAAAGTCACATCTTAAGCTAATACTAACTAGAGAACTTAAGATTATTATTCTACGAGTTGTTATAATTTCTTTGATCTCAAGTTTTTGATTAATTGGATTTGAATAATATGTTTGGATGTTTTCGAACAGTAGTTTATATGAATGGTCCAACCTACGTGTTCTTTGATTCATTCTAACGTTGTTGTCAACTTTCAAACTACATTACTCAGTCAAATCAATAACTATTTTTTTTTTAATTAAAACACTTCTAAAAAGTCTTTGGTCAATTTACACCAACAATACTATAAATATCAACCCAACTATCAATTCTTCTCATTCTCATTTCTCTTTACATAAAAAAAGAAAGAAGGAAAGAAGTTGGTATTATTTGTATTGAAATTAAAAGATGGGCATCTCTCAAAAGAATGTGTTGTTATTGTTCATTATTTTGGTAGCTTCTTCACAAGTTATGGTGGGAGCTAGGGTTATGAAAGTAGAGAAATGGATGAAGGAGGAAAAGAATGATCATAGGGTTTTTGTGTTACCTATCATTCAAGTCTTGCAACGTGCTCCAGTGCCACCGTCCGGTCGCAATCCATGCACCGGCATTCCAGGCCAAAGCAATGGTCGATGCACTCTTCAGACGATGAATGTTGCCGGTCATCATTTCGTCAATGCACGACCGCCAGCTATTCCCAATTCCGCTCTCAACGATGCCTCTACTGCTCAAAGCTCTTGA ATGTCAACATCAACTTCTTCACAAGTTATGGTGGGAGCTAGGGTTATGAAAGTAGAGAAATGGATGAAGGAGGAAAAGAATGATCATAGGGTTTTTGTGTTACCTATCATTCAAGTCTTGCAACGTGCTCCAGTGCCACCGTCCGGTCGCAATCCATGCACCGGCATTCCAGGCCAAAGCAATGGTCGATGCACTCTTCAGACGATGAATGTTGCCGGTCATCATTTCGTCAATGCACGACCGCCAGCTATTCCCAATTCCGCTCTCAACGATGCCTCTACTGCTCAAAGCTCTTGA ATGTCAACATCAACTTCTTCACAAGTTATGGTGGGAGCTAGGGTTATGAAAGTAGAGAAATGGATGAAGGAGGAAAAGAATGATCATAGGGTTTTTGTGTTACCTATCATTCAAGTCTTGCAACGTGCTCCAGTGCCACCGTCCGGTCGCAATCCATGCACCGGCATTCCAGGCCAAAGCAATGGTCGATGCACTCTTCAGACGATGAATGTTGCCGGTCATCATTTCGTCAATGCACGACCGCCAGCTATTCCCAATTCCGCTCTCAACGATGCCTCTACTGCTCAAAGCTCTTGA MSTSTSSQVMVGARVMKVEKWMKEEKNDHRVFVLPIIQVLQRAPVPPSGRNPCTGIPGQSNGRCTLQTMNVAGHHFVNARPPAIPNSALNDASTAQSS* Homology
BLAST of Chy4G077840.1 vs. ExPASy TrEMBL
Match: A0A0A0LCX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G391390 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.0e-41 Identity = 87/93 (93.55%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of Chy4G077840.1 vs. ExPASy TrEMBL
Match: A0A6J1K3A7 (uncharacterized protein LOC111491306 OS=Cucurbita maxima OX=3661 GN=LOC111491306 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 4.1e-18 Identity = 63/91 (69.23%), Postives = 68/91 (74.73%), Query Frame = 0
BLAST of Chy4G077840.1 vs. ExPASy TrEMBL
Match: A0A6J1ET04 (uncharacterized protein LOC111437447 OS=Cucurbita moschata OX=3662 GN=LOC111437447 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.7e-17 Identity = 62/91 (68.13%), Postives = 67/91 (73.63%), Query Frame = 0
BLAST of Chy4G077840.1 vs. ExPASy TrEMBL
Match: A0A7N0SY69 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.6e-09 Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = 0
BLAST of Chy4G077840.1 vs. ExPASy TrEMBL
Match: B9I5L3 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G043600 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.6e-09 Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 0
BLAST of Chy4G077840.1 vs. NCBI nr
Match: KAG6606390.1 (hypothetical protein SDJN03_03707, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100 bits (249), Expect = 3.57e-25 Identity = 63/91 (69.23%), Postives = 68/91 (74.73%), Query Frame = 0
BLAST of Chy4G077840.1 vs. NCBI nr
Match: XP_022995941.1 (uncharacterized protein LOC111491306 [Cucurbita maxima]) HSP 1 Score: 100 bits (250), Expect = 3.74e-25 Identity = 63/91 (69.23%), Postives = 68/91 (74.73%), Query Frame = 0
BLAST of Chy4G077840.1 vs. NCBI nr
Match: XP_022931191.1 (uncharacterized protein LOC111437447 [Cucurbita moschata]) HSP 1 Score: 98.6 bits (244), Expect = 3.05e-24 Identity = 62/91 (68.13%), Postives = 67/91 (73.63%), Query Frame = 0
BLAST of Chy4G077840.1 vs. NCBI nr
Match: XP_002319090.1 (uncharacterized protein LOC7487687 [Populus trichocarpa] >PNT06657.1 hypothetical protein POPTR_013G043600 [Populus trichocarpa]) HSP 1 Score: 72.0 bits (175), Expect = 1.04e-13 Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Chy4G077840.1 vs. NCBI nr
Match: KAG6738310.1 (hypothetical protein POTOM_057921 [Populus tomentosa] >TKR86240.1 hypothetical protein D5086_0000239880 [Populus alba]) HSP 1 Score: 71.6 bits (174), Expect = 1.48e-13 Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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