Chy4G067280.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy4G067280.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	WD repeat-containing protein RUP2-like
Location	chrH04: 131727 .. 132875 (+)
Sequence length	1149
RNA-Seq Expression	Chy4G067280.1
Synteny	Chy4G067280.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGCCTCTCCTCTCCCAGTTCCCCAACCCCACAAATCCAAAACTCAGAAAAACTCAAACAACAATCCCCATCCCCCACCACCACCCCCCTTCGATGCGAATGGGATTTCACCCTCGCCTCCATCGTCTCCTCCCCCACCAATTGCGCCGCTTCTGACACACTCGGCGTTGTCGAATTCGACCCTTCCGATTCCCTCATCGCCACCGCCGGAATCGCTAGAAAAATCCGTGGCTACCGTCTTCATAATCTCCTACCCCAAGACATTGATCATAACGCTACTATTACTCAATTGGACCACACCCGTGCTTCTGATTTCTGCATCTGTACTCCCGCTAAACTCAGTAGCCTCCGTTGGAAACCCAATGCTAACGGTCGAATCTTAGGCTCCGGCGATTACGATGGGGTTGTCATGGAGTACGATCTGGAAATGAAGGTACCGATTTTCGAACGAGATGAACATGGGGGCCGACGCGTCTGGAGTGTGGATTACTCAACAGTAGAGCCCGTAGTGGGAGCGTCCGGGTCAGACGATGGAACAGTGCAAGTATGGGATACGCGATGTGAGAGTGGGGAGTGCGTGGCGGTGGTGCAGCCGAGCGTGGTAGGGAGTGCGGTTTGTTGCGTGGAATTCAACCCGTTCGGAGGGGGGTTAGTGGCGGTTGGATGCGCGGACAGGAAAGCATATGGGTATGACAGACGGAAAATGAGGGAACCGGTAGTGGTATTTGAAGGGCATGGGAAAACGGTGACGTATGTGAAATTCGTGGACGGAGGGACGGTGGTGTCGGCGAGTACAGACGGGAGTTTAAAGATGTGGAAGACGGAGGAGGGAGGGGGTGCAAGGGTGGTACGCACGTACGAGGGGCACGTGAATGGGAGGAGCTTTGTGGGGTTATCAGTGTGGAGGGAGGGGGGCTTAATCGGGTGTGGATCGGAGGACAAGAGAGTGTTTGTGTACGATAAGAGATGGGGAGAGCCAATATGGGTAAAGGAATTTGATGGGGGAGTGGGGGTGGGGACGGGTTATGGGTTGGTCAGTAGTGTGTGTTGGAGGCAAGTGGGAGAGCAAGAATGCACCTTGGTAGCTGGCGGGTCGGATGGCGTTTTGCAAGTTTTTGTTGGACACAAGAACAGGTCCTTTTGA

mRNA sequence

ATGAGAAGCCTCTCCTCTCCCAGTTCCCCAACCCCACAAATCCAAAACTCAGAAAAACTCAAACAACAATCCCCATCCCCCACCACCACCCCCCTTCGATGCGAATGGGATTTCACCCTCGCCTCCATCGTCTCCTCCCCCACCAATTGCGCCGCTTCTGACACACTCGGCGTTGTCGAATTCGACCCTTCCGATTCCCTCATCGCCACCGCCGGAATCGCTAGAAAAATCCGTGGCTACCGTCTTCATAATCTCCTACCCCAAGACATTGATCATAACGCTACTATTACTCAATTGGACCACACCCGTGCTTCTGATTTCTGCATCTGTACTCCCGCTAAACTCAGTAGCCTCCGTTGGAAACCCAATGCTAACGGTCGAATCTTAGGCTCCGGCGATTACGATGGGGTTGTCATGGAGTACGATCTGGAAATGAAGGTACCGATTTTCGAACGAGATGAACATGGGGGCCGACGCGTCTGGAGTGTGGATTACTCAACAGTAGAGCCCGTAGTGGGAGCGTCCGGGTCAGACGATGGAACAGTGCAAGTATGGGATACGCGATGTGAGAGTGGGGAGTGCGTGGCGGTGGTGCAGCCGAGCGTGGTAGGGAGTGCGGTTTGTTGCGTGGAATTCAACCCGTTCGGAGGGGGGTTAGTGGCGGTTGGATGCGCGGACAGGAAAGCATATGGGTATGACAGACGGAAAATGAGGGAACCGGTAGTGGTATTTGAAGGGCATGGGAAAACGGTGACGTATGTGAAATTCGTGGACGGAGGGACGGTGGTGTCGGCGAGTACAGACGGGAGTTTAAAGATGTGGAAGACGGAGGAGGGAGGGGGTGCAAGGGTGGTACGCACGTACGAGGGGCACGTGAATGGGAGGAGCTTTGTGGGGTTATCAGTGTGGAGGGAGGGGGGCTTAATCGGGTGTGGATCGGAGGACAAGAGAGTGTTTGTGTACGATAAGAGATGGGGAGAGCCAATATGGGTAAAGGAATTTGATGGGGGAGTGGGGGTGGGGACGGGTTATGGGTTGGTCAGTAGTGTGTGTTGGAGGCAAGTGGGAGAGCAAGAATGCACCTTGGTAGCTGGCGGGTCGGATGGCGTTTTGCAAGTTTTTGTTGGACACAAGAACAGGTCCTTTTGA

Coding sequence (CDS)

ATGAGAAGCCTCTCCTCTCCCAGTTCCCCAACCCCACAAATCCAAAACTCAGAAAAACTCAAACAACAATCCCCATCCCCCACCACCACCCCCCTTCGATGCGAATGGGATTTCACCCTCGCCTCCATCGTCTCCTCCCCCACCAATTGCGCCGCTTCTGACACACTCGGCGTTGTCGAATTCGACCCTTCCGATTCCCTCATCGCCACCGCCGGAATCGCTAGAAAAATCCGTGGCTACCGTCTTCATAATCTCCTACCCCAAGACATTGATCATAACGCTACTATTACTCAATTGGACCACACCCGTGCTTCTGATTTCTGCATCTGTACTCCCGCTAAACTCAGTAGCCTCCGTTGGAAACCCAATGCTAACGGTCGAATCTTAGGCTCCGGCGATTACGATGGGGTTGTCATGGAGTACGATCTGGAAATGAAGGTACCGATTTTCGAACGAGATGAACATGGGGGCCGACGCGTCTGGAGTGTGGATTACTCAACAGTAGAGCCCGTAGTGGGAGCGTCCGGGTCAGACGATGGAACAGTGCAAGTATGGGATACGCGATGTGAGAGTGGGGAGTGCGTGGCGGTGGTGCAGCCGAGCGTGGTAGGGAGTGCGGTTTGTTGCGTGGAATTCAACCCGTTCGGAGGGGGGTTAGTGGCGGTTGGATGCGCGGACAGGAAAGCATATGGGTATGACAGACGGAAAATGAGGGAACCGGTAGTGGTATTTGAAGGGCATGGGAAAACGGTGACGTATGTGAAATTCGTGGACGGAGGGACGGTGGTGTCGGCGAGTACAGACGGGAGTTTAAAGATGTGGAAGACGGAGGAGGGAGGGGGTGCAAGGGTGGTACGCACGTACGAGGGGCACGTGAATGGGAGGAGCTTTGTGGGGTTATCAGTGTGGAGGGAGGGGGGCTTAATCGGGTGTGGATCGGAGGACAAGAGAGTGTTTGTGTACGATAAGAGATGGGGAGAGCCAATATGGGTAAAGGAATTTGATGGGGGAGTGGGGGTGGGGACGGGTTATGGGTTGGTCAGTAGTGTGTGTTGGAGGCAAGTGGGAGAGCAAGAATGCACCTTGGTAGCTGGCGGGTCGGATGGCGTTTTGCAAGTTTTTGTTGGACACAAGAACAGGTCCTTTTGA

Protein sequence

MRSLSSPSSPTPQIQNSEKLKQQSPSPTTTPLRCEWDFTLASIVSSPTNCAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGVGTGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVGHKNRSF*

Homology

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BLAST of Chy4G067280.1 vs. ExPASy Swiss-Prot
Match: Q9FFA7 (WD repeat-containing protein RUP2 OS=Arabidopsis thaliana OX=3702 GN=RUP2 PE=1 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 3.4e-126
Identity = 220/371 (59.30%), Postives = 278/371 (74.93%), Query Frame = 0


Query: 12  PQIQNSEKLKQQSPSPTTTPLRCEWDFTLASIVSSPTNCAASDTLGVVEFDPSDSLIATA 71
           P  Q  E+ +QQ  +      R EWD +L+++VSS ++ +ASD +G +EFDP+D+++ATA
Sbjct: 6   PHKQQQEQAQQQEEA------RYEWDLSLSTVVSS-SSSSASDVIGAIEFDPTDNIVATA 65

Query: 72  GIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGS 131
           GI+RKIR Y L +LL  +      ++ +D   A ++ ICTPAKLSSLRW+P + GR++GS
Sbjct: 66  GISRKIRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIGS 125

Query: 132 GDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYST--VEPVVGASGSDDGTVQVWDTRC 191
           GDYDGVVMEYDLE + P+FERDEHGGRRVWSVDY+       VGASGSDDGT+QVWD RC
Sbjct: 126 GDYDGVVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPRC 185

Query: 192 ESGECVAVVQPS-VVGSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHG 251
              E V VV+P+ +  SAVCCVEF+P GG  VAVGCADRK Y YD RK+ +P +  +GH 
Sbjct: 186 PPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHT 245

Query: 252 KTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWREGGL 311
           KTV+YV+F+DGGTVV+A TDG LK+W  E+G   RV+RTYEGHVN R+FVGLSVWR G L
Sbjct: 246 KTVSYVRFLDGGTVVTAGTDGCLKLWSVEDG---RVIRTYEGHVNNRNFVGLSVWRNGAL 305

Query: 312 IGCGSEDKRVFVYDKRWGEPIWVKEFDG-GVGVGTGYGLVSSVCWRQVGEQECTLVAGGS 371
            GCGSE+ RVFVYD+RWG+P+WV  F+  G+  G+    VSSVCWRQ G  +CTLVAGGS
Sbjct: 306 FGCGSENNRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGS 365

Query: 372 DGVLQVFVGHK 379
           DGVLQV+VG +
Sbjct: 366 DGVLQVYVGKR 366

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BLAST of Chy4G067280.1 vs. ExPASy Swiss-Prot
Match: Q9LTJ6 (WD repeat-containing protein RUP1 OS=Arabidopsis thaliana OX=3702 GN=RUP1 PE=1 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.8e-111
Identity = 211/385 (54.81%), Postives = 267/385 (69.35%), Query Frame = 0


Query: 1   MRSLSSPSSPT-PQIQNSEKLKQQSPSPTTTPL----RCEWDFTLASIVSSPTNCAASDT 60
           +  LSS SS T P I  S      S SPT   +    RC+WD +L+++VSS +    SD 
Sbjct: 18  INDLSSSSSYTWPMIMTSS--SSSSSSPTIMNIENIPRCDWDLSLSAVVSSAS--TGSDA 77

Query: 61  LGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKL 120
           +G +EFDP+  +IAT GIARKIR YRL +LL          ++ DH  AS+  ICTPAKL
Sbjct: 78  IGAIEFDPTGEIIATGGIARKIRSYRLSSLLE---------SRDDHVTASESYICTPAKL 137

Query: 121 SSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVE-PVVGA 180
           SSL+W+P+ +GR++GSGDYDGVV EYD+E +VP+ ERDEHGGRR+WSVDY+     ++GA
Sbjct: 138 SSLKWRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGA 197

Query: 181 SGSDDGTVQVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYGYDR 240
           SGSDDGTVQ+WD R   G     V+P   G+A+C VEF+PFGG  +AVGCADR AY YD 
Sbjct: 198 SGSDDGTVQMWDPR-NGGTLEETVRPG-GGAAICSVEFDPFGGSSIAVGCADRNAYVYDI 257

Query: 241 RKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNG 300
           R++ +P++V +GH KTVTY +F+D  T+V+ STDGSLK W  +   G RVVRTY GHVN 
Sbjct: 258 RRLVDPLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDID--NGRRVVRTYRGHVNS 317

Query: 301 RSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGVGTGYGLVSSVCWRQ 360
           R+FVGLSVWR GGL+  GSE+ +VFVYDKRW EP+WV         G+    VSSVC RQ
Sbjct: 318 RNFVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPVWVCGLGHTNRFGSDRRFVSSVCLRQ 377

Query: 361 VGEQECTLVAGGSDGVLQVFVGHKN 380
           V E  CTLVAGGSDG L++F G ++
Sbjct: 378 VDEDWCTLVAGGSDGALEIFSGKQS 385

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BLAST of Chy4G067280.1 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 196.4 bits (498), Expect = 5.7e-49
Identity = 112/328 (34.15%), Postives = 175/328 (53.35%), Query Frame = 0


Query: 52  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICT 111
           +++ +  +EFD  D L ATAG++R I+ +   +++ +  D    I ++           T
Sbjct: 370 SANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMS----------T 429

Query: 112 PAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPV 171
            +KLS L W  +    I  S DY+G+V  +D+  +  + E +EH  +R WSVD+S  EP 
Sbjct: 430 RSKLSCLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEH-EKRAWSVDFSRTEPS 489

Query: 172 VGASGSDDGTVQVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYG 231
           +  SGSDD  V+VW TR E+    +V+   +  + +CCV++NP     +AVG AD   + 
Sbjct: 490 MLVSGSDDCKVKVWCTRQEA----SVINIDMKAN-ICCVKYNPGSSNYIAVGSADHHIHY 549

Query: 232 YDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGH 291
           YD R + +P+ VF GH K V+YVKF+    + SASTD +L++W  ++      VRT+ GH
Sbjct: 550 YDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDN---LPVRTFRGH 609

Query: 292 VNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG----GVGVGTGYGLV 351
            N ++FVGL+V  E   + CGSE   V+VY K    P+    F            G   +
Sbjct: 610 TNEKNFVGLTVNSE--YLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFI 669

Query: 352 SSVCWRQVGEQECTLVAGGSDGVLQVFV 376
           S+VCW+       T++   S G ++V V
Sbjct: 670 SAVCWK---SDSPTMLTANSQGTIKVLV 672

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BLAST of Chy4G067280.1 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.5e-49
Identity = 115/329 (34.95%), Postives = 177/329 (53.80%), Query Frame = 0


Query: 52  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICT 111
           +++ +  +EFD  D L ATAG++R+I+ +    ++ +  D +  + ++           T
Sbjct: 367 SANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVEM----------TT 426

Query: 112 PAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPV 171
            +KLS L W   A  +I  S DY+G+V  + +  +  + E +EH  +R WSVD+S  +P 
Sbjct: 427 RSKLSCLSWNKYAKNQI-ASSDYEGIVTVWTMTTRKSLMEYEEH-EKRAWSVDFSRTDPS 486

Query: 172 VGASGSDDGTVQVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYG 231
           +  SGSDD  V+VW T  E     A V    + + +CCV++NP  G  +AVG AD   + 
Sbjct: 487 MLVSGSDDCKVKVWCTNQE-----ASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHY 546

Query: 232 YDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGH 291
           YD R +  PV VF GH K V+YVKF+    + SASTD +L++W  ++      VRT+ GH
Sbjct: 547 YDLRNISRPVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQN---LPVRTFRGH 606

Query: 292 VNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGV-----GTGYGL 351
            N ++FVGL+V  E   I CGSE   VFVY K   +P+    F G + +       G   
Sbjct: 607 ANEKNFVGLTVRSE--YIACGSETNEVFVYHKEISKPLTWHRF-GTLDMEDAEDEAGSYF 666

Query: 352 VSSVCWRQVGEQECTLVAGGSDGVLQVFV 376
           +S+VCW+       T++   S G ++V V
Sbjct: 667 ISAVCWK---SDRPTILTANSQGTIKVLV 669

[Close]

BLAST of Chy4G067280.1 vs. ExPASy Swiss-Prot
Match: Q9LJR3 (Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 8.3e-48
Identity = 118/330 (35.76%), Postives = 177/330 (53.64%), Query Frame = 0


Query: 52  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICT 111
           +S+ +  + FD    L ATAG+ +KI+ +  ++++  + D +  + +L            
Sbjct: 533 SSNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVEL----------AG 592

Query: 112 PAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPV 171
            +KLSSL W      +I  S ++DGVV  +D+     + E  EH  +RVWS+D S+ +P 
Sbjct: 593 RSKLSSLCWNSYIKSQI-ASSNFDGVVQIWDVARSQLVTEMKEH-KKRVWSIDISSADPT 652

Query: 172 VGASGSDDGTVQVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYG 231
           + ASGSDDGTV++W      G  +  ++     + VCCV+F    G  +A G AD K Y 
Sbjct: 653 LLASGSDDGTVKLWS--INQGVSIGTIKTK---ANVCCVQFPSDSGRSLAFGSADHKVYY 712

Query: 232 YDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMW---KTEEGGGARVVRTY 291
           YD R  + P+    GH KTV+YVKFVD  T+VS+STD +LK+W    +  G     + ++
Sbjct: 713 YDLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSF 772

Query: 292 EGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFD-----GGVGVGTG 351
            GH N ++FVGLSV    G I  GSE   VFVY K +  P+    F+      G+ V   
Sbjct: 773 TGHTNLKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDA 832

Query: 352 YGLVSSVCWRQVGEQECTLVAGGSDGVLQV 374
              +SS+CWR    Q  TLVA  S+G +++
Sbjct: 833 SQFISSICWR---GQSSTLVAANSNGNIKI 840

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BLAST of Chy4G067280.1 vs. ExPASy TrEMBL
Match: A0A0A0LHK2 (Ubiquitin ligase protein cop1 OS=Cucumis sativus OX=3659 GN=Csa_3G914590 PE=4 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 6.3e-216
Identity = 371/386 (96.11%), Postives = 373/386 (96.63%), Query Frame = 0


Query: 3   SLSSPSSPTPQIQNSEKLKQQSPSPTTTPLRCEWDFTLASIVSSPTNCAASDTLGVVEFD 62
           SLSSPSSPTPQIQNSEKL QQSP    TPLRCEWDFTLAS+VSSPTNCAASDTLGVVEFD
Sbjct: 4   SLSSPSSPTPQIQNSEKLTQQSP----TPLRCEWDFTLASVVSSPTNCAASDTLGVVEFD 63

Query: 63  PSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKP 122
           PSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKP
Sbjct: 64  PSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKP 123

Query: 123 NANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV 182
           NANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV
Sbjct: 124 NANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV 183

Query: 183 QVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVV 242
           QVWDTRCESGECVAVVQPSVV SAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVV
Sbjct: 184 QVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVV 243

Query: 243 VFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSV 302
           VFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSV
Sbjct: 244 VFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSV 303

Query: 303 WREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGV------GTGYGLVSSVCWRQVG 362
           WREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGV      G+GYGLVSSVCWRQVG
Sbjct: 304 WREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGVGVGVGMGSGYGLVSSVCWRQVG 363

Query: 363 EQECTLVAGGSDGVLQVFVGHKNRSF 383
           EQECTLVAGGSDGVLQVFVGHK RSF
Sbjct: 364 EQECTLVAGGSDGVLQVFVGHKKRSF 385

[Close]

BLAST of Chy4G067280.1 vs. ExPASy TrEMBL
Match: A0A5A7T553 (WD repeat-containing protein RUP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G00140 PE=4 SV=1)

HSP 1 Score: 729.9 bits (1883), Expect = 5.3e-207
Identity = 357/383 (93.21%), Postives = 365/383 (95.30%), Query Frame = 0


Query: 1   MRSLSSPSSPTPQIQNSEKLKQQSPSPTTTPLRCEWDFTLASIVSSPTNCAASDTLGVVE 60
           MRS+SSPSSPTPQ QN EKLKQQSP P      CEWDFTLAS+VSSPTNCAASDTLGV+E
Sbjct: 1   MRSVSSPSSPTPQNQNPEKLKQQSPLP------CEWDFTLASVVSSPTNCAASDTLGVLE 60

Query: 61  FDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNA-TITQLDHTRASDFCICTPAKLSSLR 120
           FDPSDSLIATAGIARKIRGYRLHNLLPQDI HNA TITQLDH+RASDFCICTPAKLSSLR
Sbjct: 61  FDPSDSLIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLR 120

Query: 121 WKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDD 180
           WKPNAN RILGSGDYDGVV EYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDD
Sbjct: 121 WKPNANARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDD 180

Query: 181 GTVQVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMRE 240
           GTVQVWDTRCESGECVAVVQPSVV S VCCVEFNP+GGGLVAVGCADRKAYGYDRRKMRE
Sbjct: 181 GTVQVWDTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMRE 240

Query: 241 PVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVG 300
           PVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVG
Sbjct: 241 PVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVG 300

Query: 301 LSVWREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGVGTGYGLVSSVCWRQVGEQE 360
           LSVWR+GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG  G+G+GYGLVSSVCWRQVGEQE
Sbjct: 301 LSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG--GMGSGYGLVSSVCWRQVGEQE 360

Query: 361 CTLVAGGSDGVLQVFVGHKNRSF 383
           CTLVAGGSDGVLQVFVGHK RSF
Sbjct: 361 CTLVAGGSDGVLQVFVGHKKRSF 375

[Close]

BLAST of Chy4G067280.1 vs. ExPASy TrEMBL
Match: A0A6J1GKZ5 (WD repeat-containing protein RUP2-like OS=Cucurbita moschata OX=3662 GN=LOC111455289 PE=4 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 3.1e-170
Identity = 296/359 (82.45%), Postives = 317/359 (88.30%), Query Frame = 0


Query: 29  TTPLRCEWDFTLASIVSSPTNCA-ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLP 88
           +TPLR EW F+LAS+VSS +    ASDTLGVVEFDPSDSLIATAGIARKIRGY L NLLP
Sbjct: 5   STPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLP 64

Query: 89  QDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKV 148
               H+ T+  LDH+RAS+FCICTPAKLSSLRWKP A GRILGSGDYDGVVMEYDLE KV
Sbjct: 65  ----HDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKV 124

Query: 149 PIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVGSAV 208
           P+FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRC+  +CVAVVQPSVV S V
Sbjct: 125 PVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPV 184

Query: 209 CCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSAST 268
           CCVEFNP+GG LV VGCADRKAYGYDRRKM E V+VFEGH KTVTYVKFVDGGT+VSAST
Sbjct: 185 CCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSAST 244

Query: 269 DGSLKMWKTEE----GGGARVVRTYEGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDK 328
           DGSLKMWK EE    GGGARVVRTYEGHVNGRSFVGLSVWR GGLIGCGSEDKRVFVYDK
Sbjct: 245 DGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDK 304

Query: 329 RWGEPIWVKEFDGGVGVGTGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVGHKNRSF 383
           RWGE +WV+EFD    VG+GYGLVSSVCWRQVGE ECTLVAGGSDGVL+VFVG K RSF
Sbjct: 305 RWGEAVWVEEFD---RVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLKVFVGEKKRSF 356

[Close]

BLAST of Chy4G067280.1 vs. ExPASy TrEMBL
Match: A0A6J1I327 (WD repeat-containing protein RUP2-like OS=Cucurbita maxima OX=3661 GN=LOC111470535 PE=4 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 1.1e-167
Identity = 292/357 (81.79%), Postives = 313/357 (87.68%), Query Frame = 0


Query: 30  TPLRCEWDFTLASIVSSPTNCAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQD 89
           TPLR EW F+LAS+VSS     ASDTLGVVEFDPSDSLIATAGIARKIRGY L +LLP  
Sbjct: 6   TPLRREWSFSLASVVSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSSLLP-- 65

Query: 90  IDHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPI 149
             H+ T+  LDH+RA +FCICTPAKLSSLRWKP   GRILGSGDYDGVVMEYDLE KVP+
Sbjct: 66  --HDGTVALLDHSRACEFCICTPAKLSSLRWKPGGGGRILGSGDYDGVVMEYDLEKKVPV 125

Query: 150 FERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVGSAVCC 209
           FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRC+  +CVAVVQPS+V S VCC
Sbjct: 126 FERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSMVRSPVCC 185

Query: 210 VEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDG 269
           VEFNP+GG LV VGCADRKAYGYDRRKM E V+VFEGH KTVTYVKFVDGGT+VSASTDG
Sbjct: 186 VEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDG 245

Query: 270 SLKMWKTEEG--GGAR--VVRTYEGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKRW 329
           SLKMWK EEG  GGAR  VVRTYEGHVNGRSFVGLSVWR GGLIGCGSEDKRVFVYDKRW
Sbjct: 246 SLKMWKAEEGGDGGARAGVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKRW 305

Query: 330 GEPIWVKEFDGGVGVGTGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVGHKNRSF 383
           GE +WV+EFD    VG+GYGLVSSVCWRQVGE ECTLVAGGSDGVL+VFVG K RSF
Sbjct: 306 GEAVWVEEFD---RVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLKVFVGEKKRSF 355

[Close]

BLAST of Chy4G067280.1 vs. ExPASy TrEMBL
Match: A0A5N6QZY3 (WD_REPEATS_REGION domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_008312 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 5.4e-143
Identity = 243/346 (70.23%), Postives = 276/346 (79.77%), Query Frame = 0


Query: 33  RCEWDFTLASIVSSPTNCAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDH 92
           RCEWDF L++IVSS T  A +DTLGV+EFDPSDS +AT GIARKIR Y L +LL  +  +
Sbjct: 52  RCEWDFNLSTIVSSDTAGAGTDTLGVIEFDPSDSFVATGGIARKIRFYSLSSLLAHESSN 111

Query: 93  NATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFER 152
           N + T LDH  A DFCICTPAKLSSL+WKP ++GRILGSGDYDGVVMEYDLE ++P+FER
Sbjct: 112 NNSTTSLDHAGACDFCICTPAKLSSLKWKPGSDGRILGSGDYDGVVMEYDLERRIPVFER 171

Query: 153 DEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVGSAVCCVEF 212
           DEHGGRRVWSVDYS  +PV+GASGSDDGT+Q+WD RCE G+CVA VQPS   S VCCVEF
Sbjct: 172 DEHGGRRVWSVDYSRWDPVMGASGSDDGTMQMWDPRCEGGKCVATVQPSARRSPVCCVEF 231

Query: 213 NPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLK 272
           NP GG LVAVGCADR+AY YD RKM +PVVVF+GH KTVTYV+F+D  T+VSA TDG L 
Sbjct: 232 NPVGGALVAVGCADRRAYVYDIRKMVDPVVVFDGHDKTVTYVRFLDAHTMVSAGTDGCLN 291

Query: 273 MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGEPIWVK 332
            W   E   ARV+RTY+GHVN RSFVGLSVWR GGL+GCGSE   VFVYD+RW EPIWV 
Sbjct: 292 TWSINE---ARVIRTYKGHVNNRSFVGLSVWRNGGLLGCGSESNEVFVYDRRWSEPIWVH 351

Query: 333 EFDGGVGVGTGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVGHK 379
            F+     G   G VSSVCWRQ+ E  CTLVAGGSDGVLQVFVG +
Sbjct: 352 GFEPVTRSGCDQGFVSSVCWRQIEEDRCTLVAGGSDGVLQVFVGKR 394

[Close]

BLAST of Chy4G067280.1 vs. NCBI nr
Match: XP_004148378.3 (LOW QUALITY PROTEIN: WD repeat-containing protein RUP2 [Cucumis sativus])

HSP 1 Score: 749 bits (1933), Expect = 2.17e-272
Identity = 370/386 (95.85%), Postives = 372/386 (96.37%), Query Frame = 0


Query: 3   SLSSPSSPTPQIQNSEKLKQQSPSPTTTPLRCEWDFTLASIVSSPTNCAASDTLGVVEFD 62
           SLSSPSSPTPQIQNSEKL QQSP    TPLRCEWDFTLAS+VSSPTNCAASDTLGVVEFD
Sbjct: 4   SLSSPSSPTPQIQNSEKLTQQSP----TPLRCEWDFTLASVVSSPTNCAASDTLGVVEFD 63

Query: 63  PSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKP 122
           PSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKP
Sbjct: 64  PSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKP 123

Query: 123 NANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV 182
           NANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV
Sbjct: 124 NANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV 183

Query: 183 QVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVV 242
           QVWDTRCESGECVAVVQPSVV SAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVV
Sbjct: 184 QVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVV 243

Query: 243 VFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSV 302
           VFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSV
Sbjct: 244 VFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSV 303

Query: 303 WREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGVG------TGYGLVSSVCWRQVG 362
           WR GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGVG      +GYGLVSSVCWRQVG
Sbjct: 304 WRXGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGVGVGVGMGSGYGLVSSVCWRQVG 363

Query: 363 EQECTLVAGGSDGVLQVFVGHKNRSF 382
           EQECTLVAGGSDGVLQVFVGHK RSF
Sbjct: 364 EQECTLVAGGSDGVLQVFVGHKKRSF 385

[Close]

BLAST of Chy4G067280.1 vs. NCBI nr
Match: KAA0038490.1 (WD repeat-containing protein RUP2-like [Cucumis melo var. makuwa])

HSP 1 Score: 722 bits (1864), Expect = 4.90e-262
Identity = 357/383 (93.21%), Postives = 365/383 (95.30%), Query Frame = 0


Query: 1   MRSLSSPSSPTPQIQNSEKLKQQSPSPTTTPLRCEWDFTLASIVSSPTNCAASDTLGVVE 60
           MRS+SSPSSPTPQ QN EKLKQQSP P      CEWDFTLAS+VSSPTNCAASDTLGV+E
Sbjct: 1   MRSVSSPSSPTPQNQNPEKLKQQSPLP------CEWDFTLASVVSSPTNCAASDTLGVLE 60

Query: 61  FDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNAT-ITQLDHTRASDFCICTPAKLSSLR 120
           FDPSDSLIATAGIARKIRGYRLHNLLPQDI HNAT ITQLDH+RASDFCICTPAKLSSLR
Sbjct: 61  FDPSDSLIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLR 120

Query: 121 WKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDD 180
           WKPNAN RILGSGDYDGVV EYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDD
Sbjct: 121 WKPNANARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDD 180

Query: 181 GTVQVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMRE 240
           GTVQVWDTRCESGECVAVVQPSVV S VCCVEFNP+GGGLVAVGCADRKAYGYDRRKMRE
Sbjct: 181 GTVQVWDTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMRE 240

Query: 241 PVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVG 300
           PVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVG
Sbjct: 241 PVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVG 300

Query: 301 LSVWREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGVGTGYGLVSSVCWRQVGEQE 360
           LSVWR+GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGG+G  +GYGLVSSVCWRQVGEQE
Sbjct: 301 LSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMG--SGYGLVSSVCWRQVGEQE 360

Query: 361 CTLVAGGSDGVLQVFVGHKNRSF 382
           CTLVAGGSDGVLQVFVGHK RSF
Sbjct: 361 CTLVAGGSDGVLQVFVGHKKRSF 375

[Close]

BLAST of Chy4G067280.1 vs. NCBI nr
Match: XP_038887335.1 (WD repeat-containing protein RUP2-like [Benincasa hispida])

HSP 1 Score: 644 bits (1660), Expect = 5.71e-231
Identity = 326/382 (85.34%), Postives = 342/382 (89.53%), Query Frame = 0


Query: 1   MRSLSSPSSP---TPQIQNSEKLKQQSPSPTTTPLRCEWDFTLASIVSSPTNC-AASDTL 60
           M+SL +P+SP    P+ Q   KL+Q      TTP RCEWDFTLA++VSS +   AASDTL
Sbjct: 1   MKSLCTPNSPQNQNPEKQLHNKLQQNE----TTPPRCEWDFTLAALVSSSSAIGAASDTL 60

Query: 61  GVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLS 120
           GVVEFDPSDSLIATAGIARKIRGYRLHNLLP++I HN TI QLDH+RAS+FCICTPAKLS
Sbjct: 61  GVVEFDPSDSLIATAGIARKIRGYRLHNLLPENI-HNGTINQLDHSRASEFCICTPAKLS 120

Query: 121 SLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASG 180
           SLRWKP  NGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYS V+PVVGASG
Sbjct: 121 SLRWKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSMVDPVVGASG 180

Query: 181 SDDGTVQVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRK 240
           SDDGTVQVWDTRC+ GECVAVVQPSVV S VCCVEFNP+GG LVAVGCADRKAYGYDRRK
Sbjct: 181 SDDGTVQVWDTRCDGGECVAVVQPSVVRSPVCCVEFNPYGGALVAVGCADRKAYGYDRRK 240

Query: 241 MREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRS 300
           MREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEE   ARVVRTYEGHVNGRS
Sbjct: 241 MREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEE---ARVVRTYEGHVNGRS 300

Query: 301 FVGLSVWREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGVGTGYGLVSSVCWRQVG 360
           FVGLSVWR GGLIGCGSEDKRVFVYDKRWGEPIWVKEFD    VG+GYGLVSSVCWRQVG
Sbjct: 301 FVGLSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDR---VGSGYGLVSSVCWRQVG 360

Query: 361 EQECTLVAGGSDGVLQVFVGHK 378
           E ECTLVAGGSDGVLQVFVG K
Sbjct: 361 EHECTLVAGGSDGVLQVFVGQK 371

[Close]

BLAST of Chy4G067280.1 vs. NCBI nr
Match: KAE8651477.1 (hypothetical protein Csa_002658 [Cucumis sativus])

HSP 1 Score: 600 bits (1546), Expect = 9.82e-215
Identity = 297/304 (97.70%), Postives = 298/304 (98.03%), Query Frame = 0


Query: 3   SLSSPSSPTPQIQNSEKLKQQSPSPTTTPLRCEWDFTLASIVSSPTNCAASDTLGVVEFD 62
           SLSSPSSPTPQIQNSEKL QQSP    TPLRCEWDFTLAS+VSSPTNCAASDTLGVVEFD
Sbjct: 4   SLSSPSSPTPQIQNSEKLTQQSP----TPLRCEWDFTLASVVSSPTNCAASDTLGVVEFD 63

Query: 63  PSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKP 122
           PSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKP
Sbjct: 64  PSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKP 123

Query: 123 NANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV 182
           NANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV
Sbjct: 124 NANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV 183

Query: 183 QVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVV 242
           QVWDTRCESGECVAVVQPSVV SAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVV
Sbjct: 184 QVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVV 243

Query: 243 VFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSV 302
           VFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSV
Sbjct: 244 VFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSV 303

Query: 303 WREG 306
           WREG
Sbjct: 304 WREG 303

[Close]

BLAST of Chy4G067280.1 vs. NCBI nr
Match: XP_022952662.1 (WD repeat-containing protein RUP2-like [Cucurbita moschata])

HSP 1 Score: 600 bits (1546), Expect = 6.75e-214
Identity = 296/358 (82.68%), Postives = 316/358 (88.27%), Query Frame = 0


Query: 30  TPLRCEWDFTLASIVSSPTNCA-ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQ 89
           TPLR EW F+LAS+VSS +    ASDTLGVVEFDPSDSLIATAGIARKIRGY L NLLP 
Sbjct: 6   TPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLP- 65

Query: 90  DIDHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVP 149
              H+ T+  LDH+RAS+FCICTPAKLSSLRWKP A GRILGSGDYDGVVMEYDLE KVP
Sbjct: 66  ---HDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKVP 125

Query: 150 IFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVGSAVC 209
           +FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRC+  +CVAVVQPSVV S VC
Sbjct: 126 VFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVC 185

Query: 210 CVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTD 269
           CVEFNP+GG LV VGCADRKAYGYDRRKM E V+VFEGH KTVTYVKFVDGGT+VSASTD
Sbjct: 186 CVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTD 245

Query: 270 GSLKMWKTEEGG----GARVVRTYEGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKR 329
           GSLKMWK EEGG    GARVVRTYEGHVNGRSFVGLSVWR GGLIGCGSEDKRVFVYDKR
Sbjct: 246 GSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKR 305

Query: 330 WGEPIWVKEFDGGVGVGTGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVGHKNRSF 382
           WGE +WV+EFD    VG+GYGLVSSVCWRQVGE ECTLVAGGSDGVL+VFVG K RSF
Sbjct: 306 WGEAVWVEEFDR---VGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLKVFVGEKKRSF 356

[Close]

BLAST of Chy4G067280.1 vs. TAIR 10
Match: AT5G23730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 453.0 bits (1164), Expect = 2.4e-127
Identity = 220/371 (59.30%), Postives = 278/371 (74.93%), Query Frame = 0


Query: 12  PQIQNSEKLKQQSPSPTTTPLRCEWDFTLASIVSSPTNCAASDTLGVVEFDPSDSLIATA 71
           P  Q  E+ +QQ  +      R EWD +L+++VSS ++ +ASD +G +EFDP+D+++ATA
Sbjct: 6   PHKQQQEQAQQQEEA------RYEWDLSLSTVVSS-SSSSASDVIGAIEFDPTDNIVATA 65

Query: 72  GIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGS 131
           GI+RKIR Y L +LL  +      ++ +D   A ++ ICTPAKLSSLRW+P + GR++GS
Sbjct: 66  GISRKIRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIGS 125

Query: 132 GDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYST--VEPVVGASGSDDGTVQVWDTRC 191
           GDYDGVVMEYDLE + P+FERDEHGGRRVWSVDY+       VGASGSDDGT+QVWD RC
Sbjct: 126 GDYDGVVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPRC 185

Query: 192 ESGECVAVVQPS-VVGSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHG 251
              E V VV+P+ +  SAVCCVEF+P GG  VAVGCADRK Y YD RK+ +P +  +GH 
Sbjct: 186 PPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHT 245

Query: 252 KTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWREGGL 311
           KTV+YV+F+DGGTVV+A TDG LK+W  E+G   RV+RTYEGHVN R+FVGLSVWR G L
Sbjct: 246 KTVSYVRFLDGGTVVTAGTDGCLKLWSVEDG---RVIRTYEGHVNNRNFVGLSVWRNGAL 305

Query: 312 IGCGSEDKRVFVYDKRWGEPIWVKEFDG-GVGVGTGYGLVSSVCWRQVGEQECTLVAGGS 371
            GCGSE+ RVFVYD+RWG+P+WV  F+  G+  G+    VSSVCWRQ G  +CTLVAGGS
Sbjct: 306 FGCGSENNRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGS 365

Query: 372 DGVLQVFVGHK 379
           DGVLQV+VG +
Sbjct: 366 DGVLQVYVGKR 366

[Close]

BLAST of Chy4G067280.1 vs. TAIR 10
Match: AT5G52250.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 404.1 bits (1037), Expect = 1.3e-112
Identity = 211/385 (54.81%), Postives = 267/385 (69.35%), Query Frame = 0


Query: 1   MRSLSSPSSPT-PQIQNSEKLKQQSPSPTTTPL----RCEWDFTLASIVSSPTNCAASDT 60
           +  LSS SS T P I  S      S SPT   +    RC+WD +L+++VSS +    SD 
Sbjct: 18  INDLSSSSSYTWPMIMTSS--SSSSSSPTIMNIENIPRCDWDLSLSAVVSSAS--TGSDA 77

Query: 61  LGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKL 120
           +G +EFDP+  +IAT GIARKIR YRL +LL          ++ DH  AS+  ICTPAKL
Sbjct: 78  IGAIEFDPTGEIIATGGIARKIRSYRLSSLLE---------SRDDHVTASESYICTPAKL 137

Query: 121 SSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVE-PVVGA 180
           SSL+W+P+ +GR++GSGDYDGVV EYD+E +VP+ ERDEHGGRR+WSVDY+     ++GA
Sbjct: 138 SSLKWRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGA 197

Query: 181 SGSDDGTVQVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYGYDR 240
           SGSDDGTVQ+WD R   G     V+P   G+A+C VEF+PFGG  +AVGCADR AY YD 
Sbjct: 198 SGSDDGTVQMWDPR-NGGTLEETVRPG-GGAAICSVEFDPFGGSSIAVGCADRNAYVYDI 257

Query: 241 RKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNG 300
           R++ +P++V +GH KTVTY +F+D  T+V+ STDGSLK W  +   G RVVRTY GHVN 
Sbjct: 258 RRLVDPLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDID--NGRRVVRTYRGHVNS 317

Query: 301 RSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGVGTGYGLVSSVCWRQ 360
           R+FVGLSVWR GGL+  GSE+ +VFVYDKRW EP+WV         G+    VSSVC RQ
Sbjct: 318 RNFVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPVWVCGLGHTNRFGSDRRFVSSVCLRQ 377

Query: 361 VGEQECTLVAGGSDGVLQVFVGHKN 380
           V E  CTLVAGGSDG L++F G ++
Sbjct: 378 VDEDWCTLVAGGSDGALEIFSGKQS 385

[Close]

BLAST of Chy4G067280.1 vs. TAIR 10
Match: AT2G32950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 196.4 bits (498), Expect = 4.1e-50
Identity = 112/328 (34.15%), Postives = 175/328 (53.35%), Query Frame = 0


Query: 52  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICT 111
           +++ +  +EFD  D L ATAG++R I+ +   +++ +  D    I ++           T
Sbjct: 370 SANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMS----------T 429

Query: 112 PAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPV 171
            +KLS L W  +    I  S DY+G+V  +D+  +  + E +EH  +R WSVD+S  EP 
Sbjct: 430 RSKLSCLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEH-EKRAWSVDFSRTEPS 489

Query: 172 VGASGSDDGTVQVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYG 231
           +  SGSDD  V+VW TR E+    +V+   +  + +CCV++NP     +AVG AD   + 
Sbjct: 490 MLVSGSDDCKVKVWCTRQEA----SVINIDMKAN-ICCVKYNPGSSNYIAVGSADHHIHY 549

Query: 232 YDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGH 291
           YD R + +P+ VF GH K V+YVKF+    + SASTD +L++W  ++      VRT+ GH
Sbjct: 550 YDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDN---LPVRTFRGH 609

Query: 292 VNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG----GVGVGTGYGLV 351
            N ++FVGL+V  E   + CGSE   V+VY K    P+    F            G   +
Sbjct: 610 TNEKNFVGLTVNSE--YLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFI 669

Query: 352 SSVCWRQVGEQECTLVAGGSDGVLQVFV 376
           S+VCW+       T++   S G ++V V
Sbjct: 670 SAVCWK---SDSPTMLTANSQGTIKVLV 672

[Close]

BLAST of Chy4G067280.1 vs. TAIR 10
Match: AT3G15354.1 (SPA1-related 3 )

HSP 1 Score: 183.7 bits (465), Expect = 2.7e-46
Identity = 116/330 (35.15%), Postives = 173/330 (52.42%), Query Frame = 0


Query: 52  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICT 111
           +S+ +  + FD    L ATAG+ +KI+ +  ++++  + D +  + +L            
Sbjct: 533 SSNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVEL----------AG 592

Query: 112 PAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPV 171
            +KLSSL W      +I  S ++DGVV  +D+     + E  EH  +RVWS+D S+ +P 
Sbjct: 593 RSKLSSLCWNSYIKSQI-ASSNFDGVVQIWDVARSQLVTEMKEH-KKRVWSIDISSADPT 652

Query: 172 VGASGSDDGTVQVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYG 231
           + ASGSDDGT          G  +  ++     + VCCV+F    G  +A G AD K Y 
Sbjct: 653 LLASGSDDGT----------GVSIGTIKTK---ANVCCVQFPSDSGRSLAFGSADHKVYY 712

Query: 232 YDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMW---KTEEGGGARVVRTY 291
           YD R  + P+    GH KTV+YVKFVD  T+VS+STD +LK+W    +  G     + ++
Sbjct: 713 YDLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSF 772

Query: 292 EGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFD-----GGVGVGTG 351
            GH N ++FVGLSV    G I  GSE   VFVY K +  P+    F+      G+ V   
Sbjct: 773 TGHTNLKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDA 832

Query: 352 YGLVSSVCWRQVGEQECTLVAGGSDGVLQV 374
              +SS+CWR    Q  TLVA  S+G +++
Sbjct: 833 SQFISSICWR---GQSSTLVAANSNGNIKI 832

[Close]

BLAST of Chy4G067280.1 vs. TAIR 10
Match: AT1G53090.1 (SPA1-related 4 )

HSP 1 Score: 183.0 bits (463), Expect = 4.7e-46
Identity = 111/330 (33.64%), Postives = 172/330 (52.12%), Query Frame = 0


Query: 52  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICT 111
           +S+ +  + FD      ATAG+ +KI+ +   +++    D +  + +L           +
Sbjct: 483 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVEL----------AS 542

Query: 112 PAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPV 171
            +KLS + W      ++  S +++GVV  +D+     + E  EH  +RVWS+DYS+ +P 
Sbjct: 543 RSKLSGICWNSYIKSQV-ASSNFEGVVQVWDVARNQLVTEMKEH-EKRVWSIDYSSADPT 602

Query: 172 VGASGSDDGTVQVWDTRCESGECVAVVQPSVVGSAVCCVEFNPFGGGLVAVGCADRKAYG 231
           + ASGSDDG+V++W      G  +  ++     + +CCV+F    G  +A G AD K Y 
Sbjct: 603 LLASGSDDGSVKLWS--INQGVSIGTIKTK---ANICCVQFPSETGRSLAFGSADHKVYY 662

Query: 232 YDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTE---EGGGARVVRTY 291
           YD R  + P+    GH KTV+YV+FVD  T+VS+STD +LK+W       G     + ++
Sbjct: 663 YDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSF 722

Query: 292 EGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGEPIWVKEFD-----GGVGVGTG 351
            GH N ++FVGLSV    G I  GSE   VFVY K +  P+   +F        + V   
Sbjct: 723 MGHTNVKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDA 782

Query: 352 YGLVSSVCWRQVGEQECTLVAGGSDGVLQV 374
              +SSVCWR    Q  TLVA  S G +++
Sbjct: 783 SQFISSVCWR---GQSSTLVAANSTGNIKI 790

The following BLAST results are available for this feature:

BLAST of Chy4G067280.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFA7	3.4e-126	59.30	WD repeat-containing protein RUP2 OS=Arabidopsis thaliana OX=3702 GN=RUP2 PE=1 S...	[more]
Q9LTJ6	1.8e-111	54.81	WD repeat-containing protein RUP1 OS=Arabidopsis thaliana OX=3702 GN=RUP1 PE=1 S...	[more]
P43254	5.7e-49	34.15	E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV...	[more]
P93471	7.5e-49	34.95	E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1	[more]
Q9LJR3	8.3e-48	35.76	Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1	[more]

BLAST of Chy4G067280.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHK2	6.3e-216	96.11	Ubiquitin ligase protein cop1 OS=Cucumis sativus OX=3659 GN=Csa_3G914590 PE=4 SV...	[more]
A0A5A7T553	5.3e-207	93.21	WD repeat-containing protein RUP2-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1GKZ5	3.1e-170	82.45	WD repeat-containing protein RUP2-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1I327	1.1e-167	81.79	WD repeat-containing protein RUP2-like OS=Cucurbita maxima OX=3661 GN=LOC1114705...	[more]
A0A5N6QZY3	5.4e-143	70.23	WD_REPEATS_REGION domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH...	[more]

BLAST of Chy4G067280.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148378.3	2.17e-272	95.85	LOW QUALITY PROTEIN: WD repeat-containing protein RUP2 [Cucumis sativus]	[more]
KAA0038490.1	4.90e-262	93.21	WD repeat-containing protein RUP2-like [Cucumis melo var. makuwa]	[more]
XP_038887335.1	5.71e-231	85.34	WD repeat-containing protein RUP2-like [Benincasa hispida]	[more]
KAE8651477.1	9.82e-215	97.70	hypothetical protein Csa_002658 [Cucumis sativus]	[more]
XP_022952662.1	6.75e-214	82.68	WD repeat-containing protein RUP2-like [Cucurbita moschata]	[more]

BLAST of Chy4G067280.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23730.1	2.4e-127	59.30	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G52250.1	1.3e-112	54.81	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G32950.1	4.1e-50	34.15	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G15354.1	2.7e-46	35.15	SPA1-related 3	[more]
AT1G53090.1	4.7e-46	33.64	SPA1-related 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 281..322 e-value: 0.99 score: 17.0 coord: 105..142 e-value: 25.0 score: 8.1 coord: 327..375 e-value: 190.0 score: 2.6 coord: 37..81 e-value: 330.0 score: 1.1 coord: 191..233 e-value: 0.094 score: 21.8 coord: 145..186 e-value: 0.036 score: 23.2 coord: 237..275 e-value: 1.7E-5 score: 34.3
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 154..186 e-value: 0.0076 score: 17.1 coord: 239..275 e-value: 6.7E-4 score: 20.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 244..284 score: 10.608706
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 174..188 score: 8.770704
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 35..375 e-value: 1.8E-82 score: 278.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 244..279 score: 8.676514
IPR044616	WD repeat-containing protein RUP1/2	PANTHER	PTHR45389	WD REPEAT-CONTAINING PROTEIN RUP1	coord: 15..379
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 56..374

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy4G067280	Chy4G067280	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy4G067280.1.exon1	Chy4G067280.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy4G067280.1.cds1	Chy4G067280.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy4G067280.1	Chy4G067280.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010224	response to UV-B
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016874	ligase activity