Chy3G063490.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy3G063490.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Multifunctional methyltransferase subunit TRM112-like protein
Location	chrH03: 16542244 .. 16542862 (+)
Sequence length	375
RNA-Seq Expression	Chy3G063490.1
Synteny	Chy3G063490.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCTACTGACTCATAACATGCTCTCATCTAACATCAAGGGTGTCATCAATGGCTTCCCTCTCCGAATTGAGGTCGAGAAAGTTGTCGAGAAGCCAGTTGACTTCAACCCAGACTTCCTCAAGAACATGTTCTCCAAGATTGAATGGAAACCCCTTGTCGATGCCTCTCGGACTATGGGCTATGCCGAGCTTCCCGAGGAGGCCGATGCATCGATGCTAGACTCCCATGACTTTCTCCAACGGTTTCACCATGCACTTCTGGAGTTGCATCTTGAGGAAGGCGCTCTTTTTTGCCCAGAGACCAACAGAAGATTCCCCGTCAATAAAGGCATTCCCAATATGCTTCTTCACGAAGACGAGGTCTGAGTTTGAGATTTTACAAAATCCTCTATTTTCTCCTATCTTATTCAGTGCTGAAAAGGAAAATCTTGGGTTTCACTAGACGAAGCACAGGGTATTTGTGAACGCTTTGTCATGAGTTTGGAAATTAGGGTTTACGCCTTTCTTTGCTTTTGTTAGCTGTGAATGAGATTATTAGATCTTTGTTTACTGATTTGATGGGTGTAAACTGCTTCGGAACATATGATTTCTATATGAATTTTAGTGCTATGCTTAA

mRNA sequence

ATGAGGCTACTGACTCATAACATGCTCTCATCTAACATCAAGGGTGTCATCAATGGCTTCCCTCTCCGAATTGAGGTCGAGAAAGTTGTCGAGAAGCCAGTTGACTTCAACCCAGACTTCCTCAAGAACATGTTCTCCAAGATTGAATGGAAACCCCTTGTCGATGCCTCTCGGACTATGGGCTATGCCGAGCTTCCCGAGGAGGCCGATGCATCGATGCTAGACTCCCATGACTTTCTCCAACGGTTTCACCATGCACTTCTGGAGTTGCATCTTGAGGAAGGCGCTCTTTTTTGCCCAGAGACCAACAGAAGATTCCCCGTCAATAAAGGCATTCCCAATATGCTTCTTCACGAAGACGAGTGCTATGCTTAA

Coding sequence (CDS)

ATGAGGCTACTGACTCATAACATGCTCTCATCTAACATCAAGGGTGTCATCAATGGCTTCCCTCTCCGAATTGAGGTCGAGAAAGTTGTCGAGAAGCCAGTTGACTTCAACCCAGACTTCCTCAAGAACATGTTCTCCAAGATTGAATGGAAACCCCTTGTCGATGCCTCTCGGACTATGGGCTATGCCGAGCTTCCCGAGGAGGCCGATGCATCGATGCTAGACTCCCATGACTTTCTCCAACGGTTTCACCATGCACTTCTGGAGTTGCATCTTGAGGAAGGCGCTCTTTTTTGCCCAGAGACCAACAGAAGATTCCCCGTCAATAAAGGCATTCCCAATATGCTTCTTCACGAAGACGAGTGCTATGCTTAA

Protein sequence

MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHEDECYA*

Homology

[Close]

BLAST of Chy3G063490.1 vs. ExPASy Swiss-Prot
Match: Q8LFJ5 (Multifunctional methyltransferase subunit TRM112 homolog A OS=Arabidopsis thaliana OX=3702 GN=TRM112A PE=1 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 6.0e-48
Identity = 91/123 (73.98%), Postives = 108/123 (87.80%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRL+THNMLS NIKGV +GFPLRIE   V+EK VDFNPDF+++MF+KIEWK LV+ +R+M
Sbjct: 1   MRLITHNMLSCNIKGVTSGFPLRIEAGNVIEKEVDFNPDFIRHMFAKIEWKALVEGARSM 60

Query: 61  GYAELPEEA-DASMLDSHD-FLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLH 120
           GYAELPEE+ DA++L S + FL++ HHALLELHLEEGAL CPET R+FPVNKGIPNMLLH
Sbjct: 61  GYAELPEESPDAAVLKSDEPFLKKLHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLH 120

Query: 121 EDE 122
           EDE
Sbjct: 121 EDE 123

[Close]

BLAST of Chy3G063490.1 vs. ExPASy Swiss-Prot
Match: Q9C9R3 (Multifunctional methyltransferase subunit TRM112 homolog B OS=Arabidopsis thaliana OX=3702 GN=TRM112B PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.1e-44
Identity = 86/123 (69.92%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRL+ HNMLS NIKGV+N FPLRIE EKV  K VDFNPDFL+ MF+KI+WK LVD +R+M
Sbjct: 1   MRLIVHNMLSCNIKGVVNKFPLRIEAEKVTVKEVDFNPDFLRYMFAKIDWKALVDGARSM 60

Query: 61  GYAELPEEA-DASMLDSHD-FLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLH 120
            Y ELP+ A D + L+S + FL++FHHALLELHLEEG+L CPET R+F V+KGIPNMLLH
Sbjct: 61  EYTELPDNAPDTTTLESDETFLRKFHHALLELHLEEGSLVCPETGRKFSVSKGIPNMLLH 120

Query: 121 EDE 122
           EDE
Sbjct: 121 EDE 123

[Close]

BLAST of Chy3G063490.1 vs. ExPASy Swiss-Prot
Match: Q9DCG9 (Multifunctional methyltransferase subunit TRM112-like protein OS=Mus musculus OX=10090 GN=Trmt112 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-29
Identity = 59/122 (48.36%), Postives = 86/122 (70.49%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGV-INGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRT 60
           M+LLTHN+LSS+++GV   GFPLR++  +V   PV+FNP+F+  M  K+EW  LV A+ T
Sbjct: 1   MKLLTHNLLSSHVRGVGTRGFPLRLQATEVRINPVEFNPEFVARMIPKVEWAALVQAADT 60

Query: 61  MGYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHE 120
           +  AE+P+E          FL++ HH LLE+ + EG L CPE+ R FP+++GIPNMLL++
Sbjct: 61  LNLAEVPKEPTEGYEHDETFLRKMHHVLLEVDVLEGTLQCPESGRLFPISRGIPNMLLND 120

Query: 121 DE 122
           +E
Sbjct: 121 EE 122

[Close]

BLAST of Chy3G063490.1 vs. ExPASy Swiss-Prot
Match: Q2KIA2 (Multifunctional methyltransferase subunit TRM112-like protein OS=Bos taurus OX=9913 GN=TRMT112 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.1e-28
Identity = 57/122 (46.72%), Postives = 86/122 (70.49%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGV-INGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRT 60
           MRLLTHN+LSS+++GV   GFPLR++  +V   PV+FNPDF+  M  K+EW  L++A+  
Sbjct: 1   MRLLTHNLLSSHVRGVGPRGFPLRLQATEVRINPVEFNPDFIVRMIPKVEWAALLEAADH 60

Query: 61  MGYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHE 120
           +   ++P+E       + +FL++ HH LLE+ + EG L CPE+ R FP+++GIPNMLL +
Sbjct: 61  LHLIQVPKEPIQGYEHNEEFLRKMHHVLLEVEVLEGTLQCPESGRVFPISRGIPNMLLSD 120

Query: 121 DE 122
           +E
Sbjct: 121 EE 122

[Close]

BLAST of Chy3G063490.1 vs. ExPASy Swiss-Prot
Match: Q9UI30 (Multifunctional methyltransferase subunit TRM112-like protein OS=Homo sapiens OX=9606 GN=TRMT112 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-26
Identity = 54/122 (44.26%), Postives = 84/122 (68.85%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGV-INGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRT 60
           M+LLTHN+LSS+++GV   GFPLR++  +V   PV+FNP+F+  M  K+EW   ++A+  
Sbjct: 1   MKLLTHNLLSSHVRGVGSRGFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADN 60

Query: 61  MGYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHE 120
           +   ++P+       ++ +FL+  HH LLE+ + EG L CPE+ R FP+++GIPNMLL E
Sbjct: 61  LRLIQVPKGPVEGYEENEEFLRTMHHLLLEVEVIEGTLQCPESGRMFPISRGIPNMLLSE 120

Query: 121 DE 122
           +E
Sbjct: 121 EE 122

[Close]

BLAST of Chy3G063490.1 vs. ExPASy TrEMBL
Match: A0A0A0LPH5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368930 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 4.8e-64
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120
           GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED
Sbjct: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]

BLAST of Chy3G063490.1 vs. ExPASy TrEMBL
Match: A0A1S3BBA0 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Cucumis melo OX=3656 GN=LOC103488061 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.4e-63
Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120
           GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGAL CPETNRRFPVNKGIPNMLLHED
Sbjct: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALICPETNRRFPVNKGIPNMLLHED 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]

BLAST of Chy3G063490.1 vs. ExPASy TrEMBL
Match: A0A5A7VD78 (Multifunctional methyltransferase subunit TRM112-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004860 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.4e-63
Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 67  MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 126

Query: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120
           GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGAL CPETNRRFPVNKGIPNMLLHED
Sbjct: 127 GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALICPETNRRFPVNKGIPNMLLHED 186

Query: 121 E 122
           E
Sbjct: 187 E 187

[Close]

BLAST of Chy3G063490.1 vs. ExPASy TrEMBL
Match: A0A6J1JT67 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488115 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.3e-60
Identity = 113/121 (93.39%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGV+NGFPLRIEVEKVVEK VDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120
           GYAELPEEA++S LDSHDFLQRFHHALLELHLEEGAL CPET RRFPVNKGIPN+LLHED
Sbjct: 61  GYAELPEEAESSKLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHED 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]

BLAST of Chy3G063490.1 vs. ExPASy TrEMBL
Match: A0A6J1JUC5 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Cucurbita maxima OX=3661 GN=LOC111487970 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59
Identity = 113/121 (93.39%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGV+NGFPLRIEVEKVVEK VDFNPDFLKNMFSKIEWKPLVDASR M
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRAM 60

Query: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120
           GYAELPEEA++SMLDSHDFLQRFHHALLELHLEEGAL CPET RRFPVNKGIPN+LLHED
Sbjct: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]

BLAST of Chy3G063490.1 vs. NCBI nr
Match: XP_004152640.1 (multifunctional methyltransferase subunit TRM112 homolog A [Cucumis sativus] >XP_031736795.1 multifunctional methyltransferase subunit TRM112 homolog A [Cucumis sativus] >KGN62692.1 hypothetical protein Csa_022115 [Cucumis sativus])

HSP 1 Score: 251 bits (640), Expect = 5.99e-84
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120
           GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED
Sbjct: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120

[Close]

BLAST of Chy3G063490.1 vs. NCBI nr
Match: XP_008444834.1 (PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucumis melo] >XP_008444835.1 PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucumis melo])

HSP 1 Score: 248 bits (634), Expect = 4.93e-83
Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120
           GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGAL CPETNRRFPVNKGIPNMLLHED
Sbjct: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALICPETNRRFPVNKGIPNMLLHED 120

[Close]

BLAST of Chy3G063490.1 vs. NCBI nr
Match: KAA0065150.1 (multifunctional methyltransferase subunit TRM112-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 248 bits (634), Expect = 4.53e-82
Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 67  MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 126

Query: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120
           GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGAL CPETNRRFPVNKGIPNMLLHED
Sbjct: 127 GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALICPETNRRFPVNKGIPNMLLHED 186

[Close]

BLAST of Chy3G063490.1 vs. NCBI nr
Match: XP_038885364.1 (multifunctional methyltransferase subunit TRM112 homolog A-like [Benincasa hispida] >XP_038885365.1 multifunctional methyltransferase subunit TRM112 homolog A-like [Benincasa hispida] >XP_038885366.1 multifunctional methyltransferase subunit TRM112 homolog A-like [Benincasa hispida])

HSP 1 Score: 243 bits (620), Expect = 6.74e-81
Identity = 116/121 (95.87%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKG+INGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGIINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120
           GYAELPEEA+ASMLDSHDFLQRFHHALLELHLEEGAL CPET RRFPVNKGIPN+LLHED
Sbjct: 61  GYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHED 120

[Close]

BLAST of Chy3G063490.1 vs. NCBI nr
Match: XP_023548932.1 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239 bits (609), Expect = 3.21e-79
Identity = 114/121 (94.21%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGV+NGFPLRIEVEKVVEK VDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120
           GYAELPEEA++SMLDSHDFLQRFHHALLELHLEEGAL CPET RRFPVNKGIPN+LLHED
Sbjct: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHED 120

[Close]

BLAST of Chy3G063490.1 vs. TAIR 10
Match: AT1G22270.1 (Trm112p-like protein )

HSP 1 Score: 191.4 bits (485), Expect = 4.3e-49
Identity = 91/123 (73.98%), Postives = 108/123 (87.80%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRL+THNMLS NIKGV +GFPLRIE   V+EK VDFNPDF+++MF+KIEWK LV+ +R+M
Sbjct: 1   MRLITHNMLSCNIKGVTSGFPLRIEAGNVIEKEVDFNPDFIRHMFAKIEWKALVEGARSM 60

Query: 61  GYAELPEEA-DASMLDSHD-FLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLH 120
           GYAELPEE+ DA++L S + FL++ HHALLELHLEEGAL CPET R+FPVNKGIPNMLLH
Sbjct: 61  GYAELPEESPDAAVLKSDEPFLKKLHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLH 120

Query: 121 EDE 122
           EDE
Sbjct: 121 EDE 123

[Close]

BLAST of Chy3G063490.1 vs. TAIR 10
Match: AT1G78190.1 (Trm112p-like protein )

HSP 1 Score: 179.1 bits (453), Expect = 2.2e-45
Identity = 86/123 (69.92%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRL+ HNMLS NIKGV+N FPLRIE EKV  K VDFNPDFL+ MF+KI+WK LVD +R+M
Sbjct: 1   MRLIVHNMLSCNIKGVVNKFPLRIEAEKVTVKEVDFNPDFLRYMFAKIDWKALVDGARSM 60

Query: 61  GYAELPEEA-DASMLDSHD-FLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLH 120
            Y ELP+ A D + L+S + FL++FHHALLELHLEEG+L CPET R+F V+KGIPNMLLH
Sbjct: 61  EYTELPDNAPDTTTLESDETFLRKFHHALLELHLEEGSLVCPETGRKFSVSKGIPNMLLH 120

Query: 121 EDE 122
           EDE
Sbjct: 121 EDE 123

The following BLAST results are available for this feature:

BLAST of Chy3G063490.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFJ5	6.0e-48	73.98	Multifunctional methyltransferase subunit TRM112 homolog A OS=Arabidopsis thalia...	[more]
Q9C9R3	3.1e-44	69.92	Multifunctional methyltransferase subunit TRM112 homolog B OS=Arabidopsis thalia...	[more]
Q9DCG9	1.3e-29	48.36	Multifunctional methyltransferase subunit TRM112-like protein OS=Mus musculus OX...	[more]
Q2KIA2	4.1e-28	46.72	Multifunctional methyltransferase subunit TRM112-like protein OS=Bos taurus OX=9...	[more]
Q9UI30	1.7e-26	44.26	Multifunctional methyltransferase subunit TRM112-like protein OS=Homo sapiens OX...	[more]

BLAST of Chy3G063490.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPH5	4.8e-64	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368930 PE=3 SV=1	[more]
A0A1S3BBA0	2.4e-63	99.17	multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Cucum...	[more]
A0A5A7VD78	2.4e-63	99.17	Multifunctional methyltransferase subunit TRM112-like protein OS=Cucumis melo va...	[more]
A0A6J1JT67	9.3e-60	93.39	multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform ...	[more]
A0A6J1JUC5	1.2e-59	93.39	multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Cucur...	[more]

BLAST of Chy3G063490.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152640.1	5.99e-84	100.00	multifunctional methyltransferase subunit TRM112 homolog A [Cucumis sativus] >XP...	[more]
XP_008444834.1	4.93e-83	99.17	PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g222...	[more]
KAA0065150.1	4.53e-82	99.17	multifunctional methyltransferase subunit TRM112-like protein [Cucumis melo var....	[more]
XP_038885364.1	6.74e-81	95.87	multifunctional methyltransferase subunit TRM112 homolog A-like [Benincasa hispi...	[more]
XP_023548932.1	3.21e-79	94.21	multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucurbi...	[more]

BLAST of Chy3G063490.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22270.1	4.3e-49	73.98	Trm112p-like protein	[more]
AT1G78190.1	2.2e-45	69.92	Trm112p-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.20.25.10		coord: 1..124 e-value: 1.3E-39 score: 137.3
None	No IPR available	PANTHER	PTHR12773:SF5	BNAA09G30730D PROTEIN	coord: 1..121
None	No IPR available	SUPERFAMILY	158997	Trm112p-like	coord: 87..122
IPR005651	Trm112-like	PFAM	PF03966	Trm112p	coord: 3..111 e-value: 4.7E-14 score: 52.7
IPR039127	Multifunctional methyltransferase subunit Trm112	PANTHER	PTHR12773	UPF0315 PROTEIN-RELATED	coord: 1..121

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy3G063490	Chy3G063490	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy3G063490.1.exon1	Chy3G063490.1.exon1	exon
Chy3G063490.1.exon2	Chy3G063490.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy3G063490.1.cds1	Chy3G063490.1.cds1	CDS
Chy3G063490.1.cds2	Chy3G063490.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy3G063490.1	Chy3G063490.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070476	rRNA (guanine-N7)-methylation
biological_process	GO:0018364	peptidyl-glutamine methylation
biological_process	GO:0030488	tRNA methylation
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0008168	methyltransferase activity