Chy3G057330.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy3G057330.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3
Location	chrH03: 10079550 .. 10082583 (-)
Sequence length	667
RNA-Seq Expression	Chy3G057330.1
Synteny	Chy3G057330.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTATGTAGATTCATTGGAAGATAATGTTGAAGGAGAGGGAGATTCTGAAAGTAGTTTAATGGCTACATCCTTTACTCAAGAAAATTGTAGAACAATGCTTGCTAGGATGGTTATCTTGGATGGATTGCCATTTAAATTTGTAGAAAGTGAAGGATTTCATCAATTTTGTCGGGCATTAAATCCAAAGTTTGTGATTCCATCAAGAGTAACTGTTGCAAATGATTGTTTTCAAATGAATATGAAGGAGAAAAAAAAGTTAAAAAGTATAATAACTTGAAGTGGCCAAAGAGTTTGTTTAACCACGGATACATGAACTTCTGTACAAAATATTAATTATATGGTTATAACAGCTCATTTCATTGATGATGATTGGAACGTTCACAAAAGAATTTTGAACTTTTGTCAAATAGCTAATCATAAAGGAGATACAATAGGGAGAGCCATTGAAAAGTGCTTAGAAGGATGGGGTATTGATAAGCTCTTTACTATAACAGTTGATAATAGTTCAAATGATGTAGCCATTGCATACTTGGTTAAAAAGTTTAGAGGCAGAAATGGGTTGGTGTTGGATGGTGAATTTATTCACGTTAGATGTTGGGCCCATATTCTTAATTTGATTGTTAATGATGCCTTAAAAGATTTGCATGTGTCTATCATTCGAATCAGGATTACTGTGAAGTATGTTAGGTCATCTTCTGCTAGACTGCAAATATTTAAAGATTTTGCCAAAGAAGATAAAATGTCAACAAAAAATTGTCTTACGATGGATGTTCCAACACGATGGAATTCTACTTTTACTATGTTGGATGGAGCAATTAAGTGTCAAAAGACGTTTGAAAGATTAAAGGAGCACGACCCTAGTTATTTGCCAAAAGATGATATTCCTATTGTTGAAGATTGAGATAATGCAAAAGTGTTTGTAAAGTTCCTGAAAACTTTTTCAGAGGTAACAGTGAAGTTTTATGCATCAATGTTTGTGACTTCAAATATATTTTTTCACTAACTTTGTTTGATCCAAGAAATAATTCGTGAATACTCGTTGTATGAGAATGCATTATTGAGTCAGATGACATTAAGCATGCAGACAAAATTCAACAAGTATTGGGGTATAACTACAAGTGAGAAGACCAATTTATTATTATATGTTTCTGTAGTTCTTGACCCTAGGTACAAATTGGCTTATGTGAATTATTGTTTTAATGAATTTTTAGAGGAAGATAGTGCAAAAAAAATGGACGAATAAGGTTGACGAAGCATTTCGTCGATTGTGTGATGATTATTATATGAGAATGTCAATGTCAAAAGAAAAATATTCACAAACACAATCATGTACTCCTATCGAAGGATTTATGTTTCAAAGTCAAAGTGAAATGCCTTCTATCTCATCTAGTGGATCTTATAAGGTACGTGCTGCTGTTCATGATAGATTTAAACAAAGCAACAAAACATGTCTCGATGATGCTAAAACAGAGGTGGCTCGTTATCTAGATGAGGCTCGTATAGAAGATGAATATTTAGACTTGCTAAGTTGGTGGAAGGTGAATTCTTCTCGATTTAAGATCACTAGCCAAGTAGCCAGAGACATCTACAGTATTCCTATATCAAATGTACCTTCTGAGTCAGCCTTTAGCACTGGAGGACGGGTGTTAGATTCTTTTCGAAGTTCATTAACTCCTCAAACTACAAAAGCACTCATTTGTGCTCAGAATTGGATTCAATCTAATCCTTTGGATGACATGACTGAAGAAATTGATGGGGCTGAAGAAATTGATGAAGGTAATATTCTTTTCGAAGTAAGCATTTAAGATTTAAAATTGTCTCATTAAGGTAACAATTTGTCATTTGGATCTAGAATTCATAAACATAGGAAAGGAGATGGAAGCTCCATTTGAGAATCTGAATCATGACTCTATGGTATAAATCCTTACTCTCATACACTTTTTTGTTTTAAATTGTTAACATCTTTGAATCTTGTTTGTTTAGAATCTTGAAGCACAATGATGTATAAATTATAATTTCTTGTGGTGGTGAACCAAAAAGCAATGACATATCTTCACAACCTGCTGGATGGGCTGGTTTTCTAGTTCCAACCATGGTAAGGAGTTGAACGTAATCTTTGAATGGAGTTCTTTGTTTCGTGGCGATACTTTCTAAAATTTGTGGTCGGCTTGAAAGATGTGTAATTCTGATAGGGATATTTTCATTTAAATCCAATATATATATATGTGTGTGTGTGTATTTGTGGTTGGTTGTGGTTTATTAGATCAAATTTATGGTCTAATATGATATAATAAGTTGCCATTTTTACCAAATATCAGACTTGAAATCATTTTTGTATGTCATCTCTGTGTGATCATATAAAACAAGATCGGCAACTGAAAGAGCAAGTCAAATTCTTCTCATAAATATTCTTTGCACCTATTAGCCGTTTTTAGGTTCCCACTCCTTTTGCATCAAAATAGAAGTTGTGCTTTCTTGTCAATGGATCTGGATAGGTTTCTTTAGTTGATCGATCCGCTGTCATATCACATGGGACAACTAGCCTTTTTAGCGGAAAACCTGCCCAATTCATAGTTCATGCGCGGGTAAGACTTAGAAGGTAAGACATCCGCAGTCTGCTGCCGATCTTCTTTCCGTTCTTGTATCTGTAGCTACGGTTGTTGAACAAAGAGAAACCGATCAATGAAAAGTTCAGGAGAGAGAGTGGAAGTTGGAGTGCTTTTCTAGCCCTAGGCTAGGCTAGTTTGCCTCCCATTTCCCTGAGAGCTAGTTGCTTTCTTTCGCCCTATCAGTCCTATCCCAGCCCTTGGGATGAAGCAGCGTGAGCTCTTTTCTACCCCAAAAAGGATATTTCCAGCTGGGCTCTTTGGGCTGAGCTTTTGATGTTGATGTAAGCAAGTGAGCGAGCCTGTGATTAATATGGCCCTCCATACCCTTTAGGAAGCAACAAGCTTTACGGAAAGAACTTTTCAAGTTTTTCCTTGCTTGCTTACCTACGGGGGTGGTGAACTAGAGCCGAGGGAAGCCCGTGG

mRNA sequence

AAGTATGTAGATTCATTGGAAGATAATGTTGAAGGAGAGGGAGATTCTGAAAGTAGTTTAATGGCTACATCCTTTACTCAAGAAAATTGTAGAACAATGCTTGCTAGGATGGTTATCTTGGATGGATTGCCATTTAAATTTGTAGAAAGTGAAGGATTTCATCAATTTTGTCGGGCATTAAATCCAAAGTTTGTGATTCCATCAAGAGTAACTGTTGCAAATGATTGTTTTCAAATGAATAAAACATGTCTCGATGATGCTAAAACAGAGGTGGCTCGTTATCTAGATGAGGCTCGTATAGAAGATGAATATTTAGACTTGCTAAGTTGGTGGAAGGTGAATTCTTCTCGATTTAAGATCACTAGCCAAGTAGCCAGAGACATCTACAGTATTCCTATATCAAATGTACCTTCTGAGTCAGCCTTTAGCACTGGAGGACGGGTGTTAGATTCTTTTCGAAGTTCATTAACTCCTCAAACTACAAAAGCACTCATTTGTGCTCAGAATTGGATTCAATCTAATCCTTTGGATGACATGACTGAAGAAATTGATGGGGCTGAAGAAATTGATGAAGAATTCATAAACATAGGAAAGGAGATGGAAGCTCCATTTGAGAATCTGAATCATGACTCTATGAATCTTGAAGCACAATGATGGAAGCCCGTGG

Coding sequence (CDS)

AAGTATGTAGATTCATTGGAAGATAATGTTGAAGGAGAGGGAGATTCTGAAAGTAGTTTAATGGCTACATCCTTTACTCAAGAAAATTGTAGAACAATGCTTGCTAGGATGGTTATCTTGGATGGATTGCCATTTAAATTTGTAGAAAGTGAAGGATTTCATCAATTTTGTCGGGCATTAAATCCAAAGTTTGTGATTCCATCAAGAGTAACTGTTGCAAATGATTGTTTTCAAATGAATAAAACATGTCTCGATGATGCTAAAACAGAGGTGGCTCGTTATCTAGATGAGGCTCGTATAGAAGATGAATATTTAGACTTGCTAAGTTGGTGGAAGGTGAATTCTTCTCGATTTAAGATCACTAGCCAAGTAGCCAGAGACATCTACAGTATTCCTATATCAAATGTACCTTCTGAGTCAGCCTTTAGCACTGGAGGACGGGTGTTAGATTCTTTTCGAAGTTCATTAACTCCTCAAACTACAAAAGCACTCATTTGTGCTCAGAATTGGATTCAATCTAATCCTTTGGATGACATGACTGAAGAAATTGATGGGGCTGAAGAAATTGATGAAGAATTCATAAACATAGGAAAGGAGATGGAAGCTCCATTTGAGAATCTGAATCATGACTCTATGAATCTTGAAGCACAATGATGGAAGCCCGTGG

Protein sequence

KYVDSLEDNVEGEGDSESSLMATSFTQENCRTMLARMVILDGLPFKFVESEGFHQFCRALNPKFVIPSRVTVANDCFQMNKTCLDDAKTEVARYLDEARIEDEYLDLLSWWKVNSSRFKITSQVARDIYSIPISNVPSESAFSTGGRVLDSFRSSLTPQTTKALICAQNWIQSNPLDDMTEEIDGAEEIDEEFINIGKEMEAPFENLNHDSMNLEAQ*WKPVX

Homology

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BLAST of Chy3G057330.1 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-15
Identity = 45/94 (47.87%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 88  KTEVARYLDEA---RIEDEYLDLLSWWKVNSSRFKITSQVARDIYSIPISNVPS-ESAFS 147
           K+E+ +YLDE+   RI++   D+L+WWK+N+ +F   S++ARDI +IP+S V S  S FS
Sbjct: 615 KSELEQYLDESLTPRIQE--FDILNWWKLNTLKFPTLSRMARDILAIPMSMVSSGNSIFS 674

Query: 148 --TGGRVLDSFRSSLTPQTTKALICAQNWIQSNP 176
             TG R+LD +RSSL P+  +AL+CA++W+Q  P
Sbjct: 675 AGTGTRMLDDYRSSLRPEIVEALVCAKDWLQYLP 706

[Close]

BLAST of Chy3G057330.1 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.0e-15
Identity = 42/94 (44.68%), Postives = 66/94 (70.21%), Query Frame = 0


Query: 89  TEVARYLDEA---RIEDEYLDLLSWWKVNSSRFKITSQVARDIYSIPISNVPSE----SA 148
           +E+ +YL+EA   RI+D   ++L WWK+N+ +F   S++ARD+ +IP+S V S     SA
Sbjct: 646 SELEQYLEEALMPRIQD--FEILEWWKLNTIKFPTLSKMARDVLAIPMSMVSSGSSIFSA 705

Query: 149 FSTGGRVLDSFRSSLTPQTTKALICAQNWIQSNP 176
            +TG ++LD +RSSL P+T +AL CA++W+Q  P
Sbjct: 706 TATGSQMLDDYRSSLRPETVEALFCAKDWLQYPP 737

[Close]

BLAST of Chy3G057330.1 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 7.0e-15
Identity = 45/140 (32.14%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 54  HQFCRALNPKFVIPSRVTVANDCFQMNKTCLDDAKTEVARYLDEARIEDE---------- 113
           +QF  + +P    P   T  ND   M+ T +++   E   YL E +  D+          
Sbjct: 619 YQFYSSCSPS--APKTKTTTND--SMDDTLMENEDDEFQNYLHELKDYDQVESNELDKYM 678

Query: 114 ---------YLDLLSWWKVNSSRFKITSQVARDIYSIPISNVPSESAFSTGGRVLDSFRS 173
                      D+LSWW+   + + I +Q+ARD+ +I +S V SESAFS GGRV+D +R+
Sbjct: 679 SEPLLKHSGQFDILSWWRGRVAEYPILTQIARDVLAIQVSTVASESAFSAGGRVVDPYRN 738

Query: 174 SLTPQTTKALICAQNWIQSN 175
            L  +  +ALIC ++W+ ++
Sbjct: 739 RLGSEIVEALICTKDWVAAS 754

[Close]

BLAST of Chy3G057330.1 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.0e-15
Identity = 45/140 (32.14%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 54  HQFCRALNPKFVIPSRVTVANDCFQMNKTCLDDAKTEVARYLDEARIEDE---------- 113
           +QF  + +P    P   T  ND   M+ T +++   E   YL E +  D+          
Sbjct: 588 YQFYSSCSPS--APKTKTTTND--SMDDTLMENEDDEFQNYLHELKDYDQVESNELDKYM 647

Query: 114 ---------YLDLLSWWKVNSSRFKITSQVARDIYSIPISNVPSESAFSTGGRVLDSFRS 173
                      D+LSWW+   + + I +Q+ARD+ +I +S V SESAFS GGRV+D +R+
Sbjct: 648 SEPLLKHSGQFDILSWWRGRVAEYPILTQIARDVLAIQVSTVASESAFSAGGRVVDPYRN 707

Query: 174 SLTPQTTKALICAQNWIQSN 175
            L  +  +ALIC ++W+ ++
Sbjct: 708 RLGSEIVEALICTKDWVAAS 723

[Close]

BLAST of Chy3G057330.1 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.7e-14
Identity = 43/94 (45.74%), Postives = 67/94 (71.28%), Query Frame = 0


Query: 88  KTEVARYLDEA---RIEDEYLDLLSWWKVNSSRFKITSQVARDIYSIPISNVPS-ESAFS 147
           K+E+ +YLDE+   RI++   D+L+WWK+N+ ++   S++ARDI +IP+S V S  S FS
Sbjct: 615 KSELEQYLDESLTPRIQE--FDILNWWKLNTLKYPTLSKMARDILAIPMSMVSSGNSIFS 674

Query: 148 --TGGRVLDSFRSSLTPQTTKALICAQNWIQSNP 176
             TG R+LD +RSS  P+  +AL+CA++W+Q  P
Sbjct: 675 AGTGTRMLDDYRSSSRPEIVEALVCAKDWLQYLP 706

[Close]

BLAST of Chy3G057330.1 vs. ExPASy TrEMBL
Match: A0A5A7SW63 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00810 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 2.0e-73
Identity = 159/219 (72.60%), Postives = 173/219 (79.00%), Query Frame = 0


Query: 2   YVDSLEDNVEGEGDSESSLMATSFTQENCRTMLARMVILDGLPFKF----VESEGFHQFC 61
           YV+ LEDNVEG+G SE+SLMA SFTQENCR MLARMVILD LPFK     V++   +   
Sbjct: 363 YVNPLEDNVEGDGGSETSLMAASFTQENCRKMLARMVILDELPFKLFTVTVDNASSNDVA 422

Query: 62  RA-LNPKFVIPSRVTVANDCFQMNKTCLDDAKTEVARYLDEARIE---DEYLDLLSWWKV 121
            A L  KF    R  +  D         DDAKTEV RYLDEARI+   DEYL+LL+WWKV
Sbjct: 423 IAYLVKKF--KGRNGLVLD---------DDAKTEVTRYLDEARIDCIGDEYLNLLTWWKV 482

Query: 122 NSSRFKITSQVARDIYSIPISNVPSESAFSTGGRVLDSFRSSLTPQTTKALICAQNWIQS 181
           NSSRFKI SQVARDIY IPIS VPS+SAFSTGGRVLDSFRSSLTPQT +ALICAQNWIQS
Sbjct: 483 NSSRFKIISQVARDIYGIPISTVPSKSAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQS 542

Query: 182 NPLDDMTEEIDGAEEIDEEFINIGKEMEAPFENLNHDSM 213
            PLDDMTEEIDGAEEIDEEFINIGKEM+APFENLN+DSM
Sbjct: 543 KPLDDMTEEIDGAEEIDEEFINIGKEMKAPFENLNNDSM 570

[Close]

BLAST of Chy3G057330.1 vs. ExPASy TrEMBL
Match: A0A5D3E590 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G001030 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.8e-69
Identity = 194/496 (39.11%), Postives = 199/496 (40.12%), Query Frame = 0


Query: 2   YVDSLEDNVEGEGDSESSLMATSFTQENCRTMLARMVILDGLPFKFVESEGFHQFCRALN 61
           YV+ LEDNVEGEGDSESS MA SFTQENCR MLARMVILD LPFKFVESEGFHQFCRALN
Sbjct: 79  YVNPLEDNVEGEGDSESSSMAASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRALN 138

Query: 62  PKFVIPSRVTVANDCFQM------------------------------------------ 121
           PKFVIPSRVTVA DCFQM                                          
Sbjct: 139 PKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFI 198

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 199 DDDWNLHKRILNFCQVANHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVK 258

Query: 182 ------------------------------------------------------------ 213
                                                                       
Sbjct: 259 KFKGRNGLVLDGEFIHIRCCAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFK 318

[Close]

BLAST of Chy3G057330.1 vs. ExPASy TrEMBL
Match: A0A5A7SNJ1 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G001460 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 5.1e-69
Identity = 192/496 (38.71%), Postives = 199/496 (40.12%), Query Frame = 0


Query: 2   YVDSLEDNVEGEGDSESSLMATSFTQENCRTMLARMVILDGLPFKFVESEGFHQFCRALN 61
           YV+ LEDNVEGEGDSES+LM  SFTQENCR MLARMVILD LPFKFVESEGFHQFCRALN
Sbjct: 107 YVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRALN 166

Query: 62  PKFVIPSRVTVANDCFQM------------------------------------------ 121
           PKFVIPSRVTVA DCFQM                                          
Sbjct: 167 PKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFI 226

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 227 DDDWNLHKRILNFCQVANHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVK 286

Query: 182 ------------------------------------------------------------ 213
                                                                       
Sbjct: 287 KFKGRNGLVLDGEFIHIRCCAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFK 346

[Close]

BLAST of Chy3G057330.1 vs. ExPASy TrEMBL
Match: A0A5D3C2L4 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00130 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 6.7e-69
Identity = 193/496 (38.91%), Postives = 199/496 (40.12%), Query Frame = 0


Query: 2   YVDSLEDNVEGEGDSESSLMATSFTQENCRTMLARMVILDGLPFKFVESEGFHQFCRALN 61
           YV+ LEDNVEGEGDSESSLMA SFTQENCR MLARMVILD LPFKFVESEGFHQFCRALN
Sbjct: 79  YVNPLEDNVEGEGDSESSLMAASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRALN 138

Query: 62  PKFVIPSRVTVANDCFQM------------------------------------------ 121
           PKFVIPSRVTVA DCFQM                                          
Sbjct: 139 PKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFI 198

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 199 DDDWNLHKRILNFCQVANHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVK 258

Query: 182 ------------------------------------------------------------ 213
                                                                       
Sbjct: 259 KFKGRNGLVLDGEFIHIRCCAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFK 318

[Close]

BLAST of Chy3G057330.1 vs. ExPASy TrEMBL
Match: A0A5A7ULM2 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001150 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.0e-64
Identity = 149/216 (68.98%), Postives = 162/216 (75.00%), Query Frame = 0


Query: 2   YVDSLEDNVEGEGDSESSLMATSFTQENCRTMLARMVILDGLPFKFVESEGFHQFCRALN 61
           YV+ LEDNVEGEGDSESSLMA SFTQENCR MLARMVILD   FK         F   ++
Sbjct: 79  YVNPLEDNVEGEGDSESSLMAASFTQENCRKMLARMVILDEFLFKL--------FTITVD 138

Query: 62  PKFVIPSRVTVANDCFQ-MNKTCL-DDAKTEVARYLDEARIE---DEYLDLLSWWKVNSS 121
                 + +      F+  N+  L DDAKTEVARYLDEARI+   DEYLDLL+WWKVNSS
Sbjct: 139 NASSNDAAIAYLVKKFKGRNELVLDDDAKTEVARYLDEARIDCMSDEYLDLLTWWKVNSS 198

Query: 122 RFKITSQVARDIYSIPISNVPSESAFSTGGRVLDSFRSSLTPQTTKALICAQNWIQSNPL 181
           RFKI SQVA+DIYSI IS VPSESAFSTGGRVLDSFRSSLT Q  +ALICAQNWIQS PL
Sbjct: 199 RFKIISQVAKDIYSITISTVPSESAFSTGGRVLDSFRSSLTFQIAQALICAQNWIQSKPL 258

Query: 182 DDMTEEIDGAEEIDEEFINIGKEMEAPFENLNHDSM 213
           +DM       EEIDEEFINIGKEMEA FENLN+DSM
Sbjct: 259 NDM------IEEIDEEFINIGKEMEAAFENLNNDSM 280

[Close]

BLAST of Chy3G057330.1 vs. NCBI nr
Match: KAA0034838.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 280 bits (716), Expect = 8.18e-88
Identity = 159/219 (72.60%), Postives = 173/219 (79.00%), Query Frame = 0


Query: 2   YVDSLEDNVEGEGDSESSLMATSFTQENCRTMLARMVILDGLPFKF----VESEGFHQFC 61
           YV+ LEDNVEG+G SE+SLMA SFTQENCR MLARMVILD LPFK     V++   +   
Sbjct: 363 YVNPLEDNVEGDGGSETSLMAASFTQENCRKMLARMVILDELPFKLFTVTVDNASSNDVA 422

Query: 62  RA-LNPKFVIPSRVTVANDCFQMNKTCLDDAKTEVARYLDEARIE---DEYLDLLSWWKV 121
            A L  KF    R  +  D         DDAKTEV RYLDEARI+   DEYL+LL+WWKV
Sbjct: 423 IAYLVKKF--KGRNGLVLD---------DDAKTEVTRYLDEARIDCIGDEYLNLLTWWKV 482

Query: 122 NSSRFKITSQVARDIYSIPISNVPSESAFSTGGRVLDSFRSSLTPQTTKALICAQNWIQS 181
           NSSRFKI SQVARDIY IPIS VPS+SAFSTGGRVLDSFRSSLTPQT +ALICAQNWIQS
Sbjct: 483 NSSRFKIISQVARDIYGIPISTVPSKSAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQS 542

Query: 182 NPLDDMTEEIDGAEEIDEEFINIGKEMEAPFENLNHDSM 212
            PLDDMTEEIDGAEEIDEEFINIGKEM+APFENLN+DSM
Sbjct: 543 KPLDDMTEEIDGAEEIDEEFINIGKEMKAPFENLNNDSM 570

[Close]

BLAST of Chy3G057330.1 vs. NCBI nr
Match: TYK30761.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 267 bits (682), Expect = 1.08e-82
Identity = 194/496 (39.11%), Postives = 199/496 (40.12%), Query Frame = 0


Query: 2   YVDSLEDNVEGEGDSESSLMATSFTQENCRTMLARMVILDGLPFKFVESEGFHQFCRALN 61
           YV+ LEDNVEGEGDSESS MA SFTQENCR MLARMVILD LPFKFVESEGFHQFCRALN
Sbjct: 79  YVNPLEDNVEGEGDSESSSMAASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRALN 138

Query: 62  PKFVIPSRVTVANDCFQM------------------------------------------ 121
           PKFVIPSRVTVA DCFQM                                          
Sbjct: 139 PKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFI 198

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 199 DDDWNLHKRILNFCQVANHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVK 258

Query: 182 ------------------------------------------------------------ 212
                                                                       
Sbjct: 259 KFKGRNGLVLDGEFIHIRCCAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFK 318

[Close]

BLAST of Chy3G057330.1 vs. NCBI nr
Match: TYK06161.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 265 bits (677), Expect = 6.02e-82
Identity = 193/496 (38.91%), Postives = 199/496 (40.12%), Query Frame = 0


Query: 2   YVDSLEDNVEGEGDSESSLMATSFTQENCRTMLARMVILDGLPFKFVESEGFHQFCRALN 61
           YV+ LEDNVEGEGDSESSLMA SFTQENCR MLARMVILD LPFKFVESEGFHQFCRALN
Sbjct: 79  YVNPLEDNVEGEGDSESSLMAASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRALN 138

Query: 62  PKFVIPSRVTVANDCFQM------------------------------------------ 121
           PKFVIPSRVTVA DCFQM                                          
Sbjct: 139 PKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFI 198

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 199 DDDWNLHKRILNFCQVANHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVK 258

Query: 182 ------------------------------------------------------------ 212
                                                                       
Sbjct: 259 KFKGRNGLVLDGEFIHIRCCAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFK 318

[Close]

BLAST of Chy3G057330.1 vs. NCBI nr
Match: KAA0026183.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 265 bits (678), Expect = 8.29e-82
Identity = 192/496 (38.71%), Postives = 199/496 (40.12%), Query Frame = 0


Query: 2   YVDSLEDNVEGEGDSESSLMATSFTQENCRTMLARMVILDGLPFKFVESEGFHQFCRALN 61
           YV+ LEDNVEGEGDSES+LM  SFTQENCR MLARMVILD LPFKFVESEGFHQFCRALN
Sbjct: 107 YVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRALN 166

Query: 62  PKFVIPSRVTVANDCFQM------------------------------------------ 121
           PKFVIPSRVTVA DCFQM                                          
Sbjct: 167 PKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFI 226

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 227 DDDWNLHKRILNFCQVANHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVK 286

Query: 182 ------------------------------------------------------------ 212
                                                                       
Sbjct: 287 KFKGRNGLVLDGEFIHIRCCAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFK 346

[Close]

BLAST of Chy3G057330.1 vs. NCBI nr
Match: KAA0055978.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 253 bits (645), Expect = 9.85e-81
Identity = 152/219 (69.41%), Postives = 163/219 (74.43%), Query Frame = 0


Query: 2   YVDSLEDNVEGEGDSESSLMATSFTQENCRTMLARMVILDGLPFKF----VESEGFHQFC 61
           YV+ LEDNVEGEGDSESSLMA SFTQENCR MLARMVILD   FK     V++   +   
Sbjct: 79  YVNPLEDNVEGEGDSESSLMAASFTQENCRKMLARMVILDEFLFKLFTITVDNASSNDAA 138

Query: 62  RA-LNPKFVIPSRVTVANDCFQMNKTCLDDAKTEVARYLDEARIE---DEYLDLLSWWKV 121
            A L  KF    R  +  D         DDAKTEVARYLDEARI+   DEYLDLL+WWKV
Sbjct: 139 IAYLVKKF--KGRNELVLD---------DDAKTEVARYLDEARIDCMSDEYLDLLTWWKV 198

Query: 122 NSSRFKITSQVARDIYSIPISNVPSESAFSTGGRVLDSFRSSLTPQTTKALICAQNWIQS 181
           NSSRFKI SQVA+DIYSI IS VPSESAFSTGGRVLDSFRSSLT Q  +ALICAQNWIQS
Sbjct: 199 NSSRFKIISQVAKDIYSITISTVPSESAFSTGGRVLDSFRSSLTFQIAQALICAQNWIQS 258

Query: 182 NPLDDMTEEIDGAEEIDEEFINIGKEMEAPFENLNHDSM 212
            PL+DM EEID      EEFINIGKEMEA FENLN+DSM
Sbjct: 259 KPLNDMIEEID------EEFINIGKEMEAAFENLNNDSM 280

[Close]

BLAST of Chy3G057330.1 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-13
Identity = 35/92 (38.04%), Postives = 57/92 (61.96%), Query Frame = 0


Query: 81  KTCLDDAKTEVARYLDEARI-EDEYLDLLSWWKVNSSRFKITSQVARDIYSIPISNVPSE 140
           +T   + K+E+ +YLDE  +   +  D+L WWK N  ++   S++ARDI SIP+S    +
Sbjct: 583 ETTGQNLKSELDQYLDETLLPRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFD 642

Query: 141 SAFSTGGRVLDSFRSSLTPQTTKALICAQNWI 172
             F    R +D +++SL P+T +ALICA+ W+
Sbjct: 643 YVFDMEPREMDEYKTSLRPETVEALICAREWL 674

HSP 2 Score: 43.1 bits (100), Expect = 3.4e-04
Identity = 18/53 (33.96%), Postives = 28/53 (52.83%), Query Frame = 0


Query: 24  SFTQENCRTMLARMVILDGLPFKFVESEGFHQFCRALNPKFVIPSRVTVANDC 77
           +F Q+ CR  +A+M+I+   P   V+  GF  F +++ P F   S   V  DC
Sbjct: 159 AFNQDKCRQEIAKMIIMHDYPLHMVQHPGFVSFVQSIQPHFDAVSFNNVQGDC 211

[Close]

BLAST of Chy3G057330.1 vs. TAIR 10
Match: AT1G18560.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-08
Identity = 27/84 (32.14%), Postives = 48/84 (57.14%), Query Frame = 0


Query: 90  EVARYLDEARIEDEYLDLLSWWKVNSSRFKITSQVARDIYSIPISNVPSESAFSTGGRVL 149
           E+ +YL E+ I     D+L WWKVNS R+   S +ARD  ++  ++   E  F   G  +
Sbjct: 569 ELTQYLSES-IVPMQTDVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCGKGEEI 628

Query: 150 DSFRSSLTPQTTKALICAQNWIQS 174
           D  +  +   +T+++IC ++WI++
Sbjct: 629 DKQKYCMPHDSTQSVICIRSWIEA 651

The following BLAST results are available for this feature:

BLAST of Chy3G057330.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AVI0	2.4e-15	47.87	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
Q75HY5	7.0e-15	44.68	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
P08770	7.0e-15	32.14	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
P03010	7.0e-15	32.14	Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1	[more]
B9FJG3	2.7e-14	45.74	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]

BLAST of Chy3G057330.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SW63	2.0e-73	72.60	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213...	[more]
A0A5D3E590	1.8e-69	39.11	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343...	[more]
A0A5A7SNJ1	5.1e-69	38.71	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G...	[more]
A0A5D3C2L4	6.7e-69	38.91	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287...	[more]
A0A5A7ULM2	1.0e-64	68.98	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319...	[more]

BLAST of Chy3G057330.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034838.1	8.18e-88	72.60	putative transposase [Cucumis melo var. makuwa]	[more]
TYK30761.1	1.08e-82	39.11	putative transposase [Cucumis melo var. makuwa]	[more]
TYK06161.1	6.02e-82	38.91	putative transposase [Cucumis melo var. makuwa]	[more]
KAA0026183.1	8.29e-82	38.71	putative transposase [Cucumis melo var. makuwa]	[more]
KAA0055978.1	9.85e-81	69.41	putative transposase [Cucumis melo var. makuwa]	[more]

BLAST of Chy3G057330.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	1.0e-13	38.04	BED zinc finger ;hAT family dimerisation domain	[more]
AT1G18560.1	1.0e-08	32.14	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 90..171 e-value: 2.4E-26 score: 91.3
None	No IPR available	PANTHER	PTHR23272:SF138	SUBFAMILY NOT NAMED	coord: 35..79 coord: 86..178
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 35..79 coord: 86..178
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 54..173

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy3G057330	Chy3G057330	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy3G057330.1.exon5	Chy3G057330.1.exon5	exon
Chy3G057330.1.exon4	Chy3G057330.1.exon4	exon
Chy3G057330.1.exon3	Chy3G057330.1.exon3	exon
Chy3G057330.1.exon2	Chy3G057330.1.exon2	exon
Chy3G057330.1.exon1	Chy3G057330.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy3G057330.1.cds5	Chy3G057330.1.cds5	CDS
Chy3G057330.1.cds4	Chy3G057330.1.cds4	CDS
Chy3G057330.1.cds3	Chy3G057330.1.cds3	CDS
Chy3G057330.1.cds2	Chy3G057330.1.cds2	CDS
Chy3G057330.1.cds1	Chy3G057330.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy3G057330.1	Chy3G057330.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0004177	aminopeptidase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0008270	zinc ion binding