Chy3G052830.1 (mRNA) Cucumber (hystrix) v1

Overview
NameChy3G052830.1
TypemRNA
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH03: 3367887 .. 3368735 (+)
Sequence length752
RNA-Seq ExpressionChy3G052830.1
SyntenyChy3G052830.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAGGGAATAACCATATCTTTCTTTCACAATCAAATATGAATTGAAGCAAGTGAAATCCATTGGTTGCCTTCATCTTCAAGAGTCACTCAAAGTTTAATTAAAACCTGATCTCAACTTTGATGTTTACATATCTTAGCCCAATAGGCCCAACCCTAAACCCTACAATAATATTACACCTCCAATCAAATTCTAATAGAAAGAAAAAAAAATGTGTAATATTAGGTTGAGTTGCACTGTTGAACTAACTTTCTAACTAATACCCACTCCCATAATTGAAGATTCTCTTTGCTTCTCTGTCTTCAAAGCACCAAACTTTTTGAAGTAGGTCTTGTTTTTGTTCCATATGTAAAATCATTCTGTCTTGCTTCTAAAGCCACCTTAGCTTTTGTTAACATAACAAACTCTCTCACCCTTTTTCTTATGTTTTGCTTACTTTCCATACCCTTAATTACAAAACACAATTACCTTCTTAATCATCATTTCCTTCTCAACATTCTTCACTTAATCACATTCTACTTTTCCTCTTCTCCAAAACCATGAGAGCCATTCAAAAATTTGTATCTCTTCCTTTCTTCTCAGGTTGTGCTTCTCGCTCTAGTGTCGCGACAAGCACCTTTGTTTCCACAACTCGAATCCGAGAGCTTGAAGGTGTTGGTCCGGAAGTAAACACAAGGGTAGCAATTGCAAGTAAGATCTTTTGTTTTTGTTTCTTTTCTTCCCATTTTTCCTGTTTTATTGGAAAATAAAACCAATGTGTTGGGTTATTTATTTACTTTTATTTTAGGAAGAGAAGAAAGTGAAAATAAAACTTCAGAAGTGAAAATGAAAAACCCTTCTGGTTTCTTAT

mRNA sequence

TTAAGGGAATAACCATATCTTTCTTTCACAATCAAATATGAATTGAAGCAAGTGAAATCCATTGGTTGCCTTCATCTTCAAGAGTCACTCAAAGTTTAATTAAAACCTGATCTCAACTTTGATGTTTACATATCTTAGCCCAATAGGCCCAACCCTAAACCCTACAATAATATTACACCTCCAATCAAATTCTAATAGAAAGAAAAAAAAATGTGTAATATTAGGTTGAGTTGCACTGTTGAACTAACTTTCTAACTAATACCCACTCCCATAATTGAAGATTCTCTTTGCTTCTCTGTCTTCAAAGCACCAAACTTTTTGAAGTAGGTCTTGTTTTTGTTCCATATGTAAAATCATTCTGTCTTGCTTCTAAAGCCACCTTAGCTTTTGTTAACATAACAAACTCTCTCACCCTTTTTCTTATGTTTTGCTTACTTTCCATACCCTTAATTACAAAACACAATTACCTTCTTAATCATCATTTCCTTCTCAACATTCTTCACTTAATCACATTCTACTTTTCCTCTTCTCCAAAACCATGAGAGCCATTCAAAAATTTGTATCTCTTCCTTTCTTCTCAGGTTGTGCTTCTCGCTCTAGTGTCGCGACAAGCACCTTTGTTTCCACAACTCGAATCCGAGAGCTTGAAGGTGTTGGTCCGGAAGTAAACACAAGGGTAGCAATTGCAAGAAGAGAAGAAAGTGAAAATAAAACTTCAGAAGTGAAAATGAAAAACCCTTCTGGTTTCTTAT

Coding sequence (CDS)

TTAAGGGAATAACCATATCTTTCTTTCACAATCAAATATGAATTGAAGCAAGTGAAATCCATTGGTTGCCTTCATCTTCAAGAGTCACTCAAAGTTTAATTAAAACCTGATCTCAACTTTGATGTTTACATATCTTAGCCCAATAGGCCCAACCCTAAACCCTACAATAATATTACACCTCCAATCAAATTCTAATAGAAAGAAAAAAAAATGTGTAATATTAGGTTGAGTTGCACTGTTGAACTAACTTTCTAACTAATACCCACTCCCATAATTGAAGATTCTCTTTGCTTCTCTGTCTTCAAAGCACCAAACTTTTTGAAGTAGGTCTTGTTTTTGTTCCATATGTAAAATCATTCTGTCTTGCTTCTAAAGCCACCTTAGCTTTTGTTAACATAACAAACTCTCTCACCCTTTTTCTTATGTTTTGCTTACTTTCCATACCCTTAATTACAAAACACAATTACCTTCTTAATCATCATTTCCTTCTCAACATTCTTCACTTAATCACATTCTACTTTTCCTCTTCTCCAAAACCATGAGAGCCATTCAAAAATTTGTATCTCTTCCTTTCTTCTCAGGTTGTGCTTCTCGCTCTAGTGTCGCGACAAGCACCTTTGTTTCCACAACTCGAATCCGAGAGCTTGAAGGTGTTGGTCCGGAAGTAAACACAAGGGTAGCAATTGCAAGAAGAGAAGAAAGTGAAAATAAAACTTCAGAAGTGAAAATGAAAAACCCTTCTGGTTTCTTAT

Protein sequence

LRE*PYLSFTIKYELKQVKSIGCLHLQESLKV*LKPDLNFDVYIS*PNRPNPKPYNNITPPIKF**KEKKMCNIRLSCTVELTF*LIPTPIIEDSLCFSVFKAPNFLK*VLFLFHM*NHSVLLLKPP*LLLT*QTLSPFFLCFAYFPYP*LQNTITFLIIISFSTFFT*SHSTFPLLQNHESHSKICISSFLLRLCFSL*CRDKHLCFHNSNPRA*RCWSGSKHKGSNCKKRRK*K*NFRSENEKPFWFLX
Homology
The following BLAST results are available for this feature:
BLAST of Chy3G052830.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G052830.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G052830.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G052830.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Chy3G052830Chy3G052830gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Chy3G052830.1.exon1Chy3G052830.1.exon1exon
Chy3G052830.1.exon2Chy3G052830.1.exon2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Chy3G052830.1.cds1Chy3G052830.1.cds1CDS
Chy3G052830.1.cds2Chy3G052830.1.cds2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Chy3G052830.1Chy3G052830.1-proteinpolypeptide