Chy2G042380.1 (mRNA) Cucumber (hystrix) v1

Overview
NameChy2G042380.1
TypemRNA
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH02: 23474203 .. 23474914 (-)
Sequence length570
RNA-Seq ExpressionChy2G042380.1
SyntenyChy2G042380.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATCGTCTGCCGTGGAGTCATCGTCGTCCAACTCGTATTGCATTTGTTATTCACGTTCAACGCGAGACACATCCTCTCTAATGGAGACAACAATTTTGGTGCCTTTCACACCAGCCACGAGTTACTTCTATTAATGTAAATATTCTACATTTTAGGAATTCTTACCTTATTTACATTGTACATGCTCTCTATTTATGCACAGTATTTTCATGTAATAGACACAATTATTTCATCAATAAAATATTGATCCACATGGTATCAGAGCAAAAGATTATGACCTAGCTTCCTCAAATTTTTTTATCCTTGCCGCTGCCAATATTCAGTTACAAGTAGACTGCCACCTCCCTCCACCACAAACTTCGCTGTCGTCGACGTTCGTCTGCTCGTCTCCAGATCCCGATTTGACTGTTCATCAGTCTCTGTTTCATTTGATTCGTGAGTCTCACCTCCTCCACCGTCGTCTCAATCGATCTTCCATCAAAGATCTCTGTTCACGGGACGACCACGTACTCCTCTCCAGATCTCGTTCGGCTGTCAGTCAGCCTCTATTTGTCCGATTCGCCGCCAGATCCGAACATCAACGCGGCCTCCATCTCGTGCGATTCAGACATCATCGTTGTCTTCTGCTTCCGACGGTCTCTGTTAAACTAAATCGATCTACAATCGGTATTCTCCTCTCAAATCCAGCTCCTTTCATTCACGTCTGA

mRNA sequence

ATGAACATCGTCTGCCGTGGAGTCATCGTCGTCCAACTCGTATTGCATTTGTTATTCACGTTCAACGCGAGACACATCCTCTCTAATGGAGACAACAATTTTGGTGCCTTTCACACCAGCCACGAAGCAAAAGATTATGACCTAGCTTCCTCAAATTTTTTTATCCTTGCCGCTGCCAATATTCAGTTACAAGTAGACTGCCACCTCCCTCCACCACAAACTTCGCTGTCGTCGACGTTCGTCTGCTCGTCTCCAGATCCCGATTTGACTGTTCATCAGTCTCTGTTTCATTTGATTCGTGAGTCTCACCTCCTCCACCGTCGTCTCAATCGATCTTCCATCAAAGATCTCTGTTCACGGGACGACCACGTACTCCTCTCCAGATCTCGTTCGGCTGTCAGTCAGCCTCTATTTGTCCGATTCGCCGCCAGATCCGAACATCAACGCGGCCTCCATCTCGTGCGATTCAGACATCATCGTTGTCTTCTGCTTCCGACGGTCTCTGTTAAACTAAATCGATCTACAATCGGTATTCTCCTCTCAAATCCAGCTCCTTTCATTCACGTCTGA

Coding sequence (CDS)

ATGAACATCGTCTGCCGTGGAGTCATCGTCGTCCAACTCGTATTGCATTTGTTATTCACGTTCAACGCGAGACACATCCTCTCTAATGGAGACAACAATTTTGGTGCCTTTCACACCAGCCACGAAGCAAAAGATTATGACCTAGCTTCCTCAAATTTTTTTATCCTTGCCGCTGCCAATATTCAGTTACAAGTAGACTGCCACCTCCCTCCACCACAAACTTCGCTGTCGTCGACGTTCGTCTGCTCGTCTCCAGATCCCGATTTGACTGTTCATCAGTCTCTGTTTCATTTGATTCGTGAGTCTCACCTCCTCCACCGTCGTCTCAATCGATCTTCCATCAAAGATCTCTGTTCACGGGACGACCACGTACTCCTCTCCAGATCTCGTTCGGCTGTCAGTCAGCCTCTATTTGTCCGATTCGCCGCCAGATCCGAACATCAACGCGGCCTCCATCTCGTGCGATTCAGACATCATCGTTGTCTTCTGCTTCCGACGGTCTCTGTTAAACTAAATCGATCTACAATCGGTATTCTCCTCTCAAATCCAGCTCCTTTCATTCACGTCTGA

Protein sequence

MNIVCRGVIVVQLVLHLLFTFNARHILSNGDNNFGAFHTSHEAKDYDLASSNFFILAAANIQLQVDCHLPPPQTSLSSTFVCSSPDPDLTVHQSLFHLIRESHLLHRRLNRSSIKDLCSRDDHVLLSRSRSAVSQPLFVRFAARSEHQRGLHLVRFRHHRCLLLPTVSVKLNRSTIGILLSNPAPFIHV*
Homology
The following BLAST results are available for this feature:
BLAST of Chy2G042380.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy2G042380.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy2G042380.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy2G042380.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Chy2G042380Chy2G042380gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Chy2G042380.1.exon2Chy2G042380.1.exon2exon
Chy2G042380.1.exon1Chy2G042380.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Chy2G042380.1.cds2Chy2G042380.1.cds2CDS
Chy2G042380.1.cds1Chy2G042380.1.cds1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Chy2G042380.1Chy2G042380.1-proteinpolypeptide