Chy2G038240.1 (mRNA) Cucumber (hystrix) v1

Overview
NameChy2G038240.1
TypemRNA
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH02: 13644137 .. 13650159 (+)
Sequence length150
RNA-Seq ExpressionChy2G038240.1
SyntenyChy2G038240.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGTCATCTCCACGCTTTACACGTGTCAAGCTACCACTCATCAGGCCATGCAACCAATTGTCACTTCTGATTAGACATTTCCCTTAAAATGCTAACCTTTTCTTCTTGGAATGCTCAACTATTTATCGTCTGACTCTCTTTTCGAAAAACAACAGAACATTTACTTTCCCTCAAAGGTTCATCTGGTCACCTCATACGAACGTCTACTTCATCGCGACCACACTTAGGCGTAGGTACTTCTCATCGCGTTACTACCCAAATGCCTAGTTCTTAGCATCAGTTGCATGCTTCTTCTTCCCCAGTCAATCCTATAGTGTCGCCTTGCTTCAAAGCAAGCATTTTCTTCTCGCGTTACCTCTCCTCAATCGCATTCTTCCTCGCCGAATGCCTCTTATTTATGCTTAGCCAAAATGACTTCTCAACAGGCCTCCTCTTCAACATTGCTCCTTTTATCTGGATCAGGGCCTCACAATATATCACTAGCAATATATAAAAATTAATATTGCAAATTTAAAATCTAAAATTTAAAGGTTAATTTAAATAAATATAACATAACGCCAAATATTTATGGCTCGTGTAACAAAAACAAAAAACTCATAAAGTCAATAAAATATTTTTGTAAATTCAGATTTTTCCTTAATATTGGGGATGATTCGTCACTTCTCTTTCTTCTTTTTCTTTGCGATTTATTCTCTTCTCTTCAAGATTTCTTCATATCCTCTTTTAGATTTTCTTTCTTCTATTTTTATACATTTTCTTTTTCTTTCTTTTTCATCTTCTATTTCTTTCTTCCAGCTCCTCTTCCAGAACATCAAAATCGTTTAAATATCACTTTGATATGATCTAAACGATTGATATGATCTAAATGATTGCTTACCTAGTCAACACGATCGTTAACATAGTCAACATGATCGTTTAGATTTGAAGTCCTTTTTCTATTATTAAAAAATAACTACACGATCGTGTGGATATGATCTAAACGATTGCTTACCTAGTCAACACGATCGTTAATATGGTCAACATGATCGTTTAGATTTGAAGTCCTTTTTCCATTATTAAAAAATAACTACATGATCGTGTGAATATGATCTAAACGATCGCTTACCATAGTTAACGTGATTGTTTAACATGGTGAACACGATCGTTTAAATTTAAAGCCCTTTATCCCATCATTTAAAAATAACTGCAGGATCATATGGATATGATCTAAACGATCGCATACCATAGCCAACACAATCGTTTAACATGTCAACACAATCATTTAGATTTGAAACATTTTTTCCATCGTTAAAAGGAACTATACGATTGTGTTGATACTACCTACACGATAGTATATCATTTCCTACACGAGCGCGTATCATGATCGTTTAGAAGAAGAATTACACGAGCATGTGTGATCGATTAATCGCGTGTTAACTGAGACATTTTTTGTATTTTTTCATTGTAAGTCTGTGGGCTTTTTCCTTTATTTGTTGTCTATGTATAAATTTTTTTAAAAGCCCCATGAGGAGAACTTCATCATTACATAAGCGCCTCTTGACCAACATGACAAACAAATTTGTTATTATCTAGGAAATATATGTATTATATTTTCTCATAGCCGCAAATAAAGAATCAATAGAATAATTAGGAATCACCTCATCATTACCAATATCTGCTGCTGGTGTTCCCTTTGAACAAAAGGTGAAGAAGATTGTGTAGTAGTTTGGTGAATCATATTAATTGGCTGAACACTATGGGTTAGAATACAGGCAACTGAAGGCGAGCATCAAATTTGGGACCGAGTAGTCACCTTTGTTGGCTACAACATCACCTGCTCCAATGCTCGGTGCTGAAGTTCGATTGGATAGTCACGAACACAACCTATTCGAGGTCCTGCACCAGTTGTCCATTTGCAAGATAGACGCTTTCCCAATTGATATGATTTTGTTTCTTTGTGTGAGTTTATTCGTTTCAGTACTGATTCATCAAGGATGATACCAAACTCGTAACTCCTATTTTCCTCTTCTAACATGTTTTTCTTCGGAGTTTCTGTATCCAACTCCGAAACATATTTTAAGGATCTCATTTCTATGTTTTCTCGTATGTGAAGATTGGTTAATTTTCTTCTCAAATTGATTGACCTATTTGGCTCAAATGTTTTGATGGTTGACGATGCTAATTGCTCTTGAAAATCTGATTTTCCACCAATTGTTTCTGCAGCAACAATCTTTGAAACGCCATCATCCGAACCACCACTCACTTGTTCAATCCAATCCTCCTCTGACGAGCCTTTTCGAACATGAAGACTTCCTTTTTGTGTTTGTAGTACATTGTCTTCCTCACCCTCCTCATCACGTGGACTTATCTAAATTTAATTGAAAAAGGAAACATGTAAATAATGTTCTGATTTCTTTAGAAAAGAACATCATAGATCTAAAATCTCAAATCTAACCTTCACATGAGTGAGGTCAACGTTGTTTTCTGAAAGGAAGGAGATAAATTCACGAAAGTTTTCTTCTGTGGGACGGTAATGACCACTATGAGGCCAAATTGCCTGCTTAAAAAAACGAGAAACTGTCACTAAACGGTAAACAGACTCAAACATGAAGATGAACCACTTAAATAGTAGGAATTCCAGTGAGAAAAGAATGAAAGAGAATTCTAAAAGCACTGTGACTTGTACCTGTAGGATGCCATTTTCAACAACCAATCTCCCAGCAGCAAGTGTGGCTCCTCCAGCCAAGAAACTCGAATGGTGAAACTTACCCTTCATTTTCTTTCCAACATACAAGGCTTTAGAGGTGCTGAGAACAAATATCCACTTCTCACGCTTATCAACTCTAGTGATGTGAAGTAGTTCCCCAGATTGCTTGTAAATGAACTTCCCATCCTCCACAACAACTTCATAGGCTGTTCTTTCCAACTGAAAGAAAACCATTTGGATGGTTCAACATTCCATATGAACTACAAGAATAATAACAATTTGATGCAGGTTTTAGAGGCTCACTGGACCCAAATACTGAATGCACTGCTGTTGAAGTTTCACTCTAGGGCATTCTTCAACAAGATCTACTCCCTTTCCTTCTCCTATATCCAACCTAAGAAGTATAGGTACTTTATTTTAACTAATGTGTAAACGCCCAAATGCATGTCCCATATTTGTTAGGCCCATTTAAAATGCTCAATAGTTTTATAATAAAGGGACATCAAAGTTATATATAACAAAAAAAGCAAAAATAGTAAGATATGATCCAAAAAAATTAACAAAGTTTAAGCTGGAGTATATCATCCTCGTTTCTTAAGCATATTGACTTCAATATTTTTTAGAATTAAAATTGATATATATTCTAATAAACTGATGGAATCTCTTTAAAGAATAATAATAAAAACTATGTACACGTTATGGTAAAAAACCACTTAAGGTCAAAAATCCACTAGACTTGATTTTGCCAATGAAGTGTATATATTTTGTTCACTTTGCCCTTTTTTTGCAAATTCCCCTAAACTTATTGTTGTTGTGCCTATGAGTCTATAACCTATGTCCTCTCCTAGACTAAAAATAAAAATAATAATAAAGATGATAATAATAATAATAGTGTGATATTGTGTCTAGTCATCTAAGTTAATATCAATGCTTCTTTAGTTCTTAGTATCCAACATGTTTTACTCTAAACCTTTAGCTTTTAGAAAACCTGAATTTAGCACTGAAGCTTTTAAAAATTAGGTCAAGGAATGTTTACCAATAGAAAAAGGGTTGTTCACTCTGAGAGTAAAGCCATTTATCATAATAAAACTGTAGGTTCTGGCCATAACGATGTCGTGGATCAATCTGGCAACAGAAAAAGAAATTACAACTAATAATAACAAGTTAATTTTTTTAAAAAAAAAAAACTGGTCCAATGTAACACTTTATTTATCTCAAGTCCATTAGACGTACAGCCTCAAGCCAGTGTTGTAAAGCAAGCATCTGAGCTTTGTCATTTTTAAACAAACCCTTTCCAACCTGTCATGTTTTAAAGACATATGGTTTATATTTTTGAGATGTTTGTTTGTTTCATGACAATATCAAGTAAAACATGGTGAAATTTACCCTAGCAGCATTGGTTCTTGCTCGAGACCACCGCGAAATGGCAGTTTTGTGTTTCTCGATGTCATAAAATGAGATGGAACTTCTCCTGAGGTCAGCAAAATTCAAGAGTTTCCACCTGCAACAGGGATAACCACTGAGAACAACCTAAAAAAAATCCATTTTGATTCAGAAAAAAGGCACAAGCCGGCACACATACCAACTCTTCTCTGCAATAACTGCACAATCAGCCAGCCTTCTCCTTGTTCTAAAGCTTTTATAAACTTTCTGTAATTCAGTTGCTGCCATGTGCTCCATAGTTATTGCAGCGAGATCCATCACAGCTTGGGTCCCATCATGATTCTCGGGCCTAGAAGATTGACTCTCCACGTCAATGCTCTTAGGACTATTAGCAACAACATCCAACTCTGCCTCCTGTAGAGGAATATCTGTTATCTCTGTTGAAGTCATCTTCTCCAAATCTTTACCACTCAACCTAACAGATGAATCTAACGCCGCCTTGTGCAAACCCACCGATTTGATTACTGAAGGCTTCAAATCTCCACTATCAGAACTATCAGAACTATCAGAACTGGTGGATCGCTGAAGAGCTTTTACTTCATCATCGCCAAAATTGATGAATTTCACAGTACCAGATCCAGATTCTCCCCCATTTTTCTTATCAATGTATTTGGCCAAAGGACATGTAAAGAAAGCCCCCATTTTAGCAAAAATGGTTCAGTAATGACAAGATGAACATTATTCCTGTAACATGAAGTTCCTAGAAATAAGAACAAAAAAAAAAATCCAACACAAATGAAGTCATAAATCTTCAAGGAATAGACAGAGTCAATCTCTTAACAAACAAGTTGAATTTATGCCCAGAAAAAAAAGATTCGCAAACAATCAATCCAAGAATACTTTAGAAGAAAACAAAAAAAGTGAAAGATATAAATGCTAAACTTGAAGCCCAAGGAGAGTTTCCCTTAATTTTCAAGCCCAAAACAATGTACTAACAGCAGACAGACCAGTATGATTTCCAGTAGCCTAGAACCAAAGATTTGTGAGACAGGTCAGAAACGGTAAAAAACCCATTTCATCAAGAAAACTAGATTCCTTAGCTCTTGTTTGATAACCCTTTGGTGTTTAGTTTTTGGTATTTGAAAATTAAGCTTAAACACTCAACCCATCTATTGATTTGTCTATAGGGTTATGTAGTTTTAAGGCGTGTTTTAAAAAACCAAGCCAAATTCTGAAGGACAACTTTAAAAAACTTGTTTTCGTGTATTTGTAATTGACTAAAAATTCAAAAGTTTAGTTAGGAAATATGAAACAGTATTAAAGAAGTAAGAAATGAAGCATAATTTTCAAAACCAAGAACCAAACTATTATCAATCGGATCTAATCAACCAAATTCCAGTAAGCAATCACAGTGGGACTTCAGAAACAGACAGAAAAAGAGCATCAAGCACAGACCGAACTTCAGAAATAAGCAATCCACATTGCCATGAGACCAATATCAGAGAGAAAAAGAATTGGAAAAAAAAATCCATTTCATCAGAAAAGCTTGAAATGAATGAACAAACAGCAAGAACCAACATGGAGCAAAAGAGAAACCTGAAATGACAGATTTACCTAAATCATAGGATGGTAAGAACTAAAAAATGTGATAGGTATAAGAGAGAACTCGCGCTTTGGAAAAGGTAAAAGCCATAGAGCATCAATTACTAATGAGTATAAAAAAATTAATGTAAGAGAATTCACAAGCAGACAGTACAAGGATCGAAACAAAACAATAAATTCGTTGAATGGACATGGAAGAGGGGGAGTCTCGTGCTGGACGAAGGGGAAATAGTTGTGGAGGATTGAGATTCTGGGGGACCAAAATTCGTTGTAGCTCCCCCTAGAGAAGAAGTGAGATGGAAAATCTTCCATAATTGTTGAGCTGGGAACAGATTATGAATGTGAATTTAG

mRNA sequence

TGGGTCATCTCCACGCTTTACACGTGTCAAGCTACCACTCATCAGGCCAACAGAACATTTACTTTCCCTCAAAGGTTCATCTGGTCACCTCATACGAACGTCTACTTCATCGCGACCACACTTAGGCGTAGATTATGAATGTGAATTTAG

Coding sequence (CDS)

TGGGTCATCTCCACGCTTTACACGTGTCAAGCTACCACTCATCAGGCCAACAGAACATTTACTTTCCCTCAAAGGTTCATCTGGTCACCTCATACGAACGTCTACTTCATCGCGACCACACTTAGGCGTAGATTATGAATGTGAATTTAG

Protein sequence

WVISTLYTCQATTHQANRTFTFPQRFIWSPHTNVYFIATTLRRRL*M*I*
Homology
The following BLAST results are available for this feature:
BLAST of Chy2G038240.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy2G038240.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy2G038240.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy2G038240.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Chy2G038240Chy2G038240gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Chy2G038240.1.exon1Chy2G038240.1.exon1exon
Chy2G038240.1.exon2Chy2G038240.1.exon2exon
Chy2G038240.1.exon3Chy2G038240.1.exon3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Chy2G038240.1.cds1Chy2G038240.1.cds1CDS
Chy2G038240.1.cds2Chy2G038240.1.cds2CDS
Chy2G038240.1.cds3Chy2G038240.1.cds3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Chy2G038240.1Chy2G038240.1-proteinpolypeptide