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Chy2G027140.1 (mRNA) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGCAGGGGAGCAGGAGAGTGCAGGGTATATGGCTGTGGCTGTTGTGTTTTTTTTTGCTGATGTGTTGTGTTGTTTTTGTGGTTGGTGATGATATGTGGTTGATATGTTTTTTTTTGTTATGGATGTTAACTTCGCTAATGAAAAGGGGTCCATGTGTTTTATCTTGTGAGTTCGTGGTTGTATTAGGTTTTAACCTTGTGTTTGACTTCTGAATTGGTTTGCTCTGGGGTAACTGCTTTCGCTGTCAGAATAAGATGTGGCTCTGATTGATCACAAAAAGAATGGTGGTGTATTTGACAAAAAAGGGGGAGTTTGTTGAGATTTGATTTTTGTCAAATATATGATTCTTTTAAACTAATTTCAAATCTCTCTAAAATCTAGGGAGTATTAGTTAAGATTGTCCCCTATGAATAAGGAAAGGAGAATCTGAATGAAAGAGATGACGGGTATATATTTGTGATGAGCATGAAGTAGTTTGATGATGAAAAAGCAACGAAAAAAAACAGGTGTACTTGTGAAGATACACAACGACCAATCTTATAGAAAACCAGTGGAAAGCGCAAAAGAAAAAGGTGATTAATTTGACACTGGTTATATGCTTTATGTACGGAAAGATGTAATTCCATGGTTCAAGATTTCTTTACTCAGATCAGAAATATTCACACGAAGCATTGAGTTGAGGGTTGACCTTACAGATTCAGGGGGAGTCTGAAAGTGTTGGTTGCTAGTTTCATGTTACTTTCAGGGGGAGCCTGAAGTTAGTTGAATCATAGTTATAATTATCGATGTAACTAGTGTAATCTGTTATTCAGAATGATCTTTAATAATATTCCTGATCTGAGCAAGAAAGCTCCCCAGATGTAGGTTATATTTACCGAACTGGGTTACCAAAGTGTCGTGCATTTACTTATCTTCTTATATCTTTAGTTAATACTGAAGTCAACTGCATGTGGTATAACTAGGAGTTACTTAACAGTAGTTTATTTTTTCACTATATACTTTATGTGAGAAAGTTGTAGGATCTTAGGTAAAGTGATCGATAATGAACTTGGTTAAAGTTTTTTTGGATAAGAAACACAAAAAAAAATTGTTCCGTTAGATCTAAGATCTGCAAACTCAACGAAATAAGATATCTCCTTCCAATGAAAGATTCCAAAAGATCAACTTCATTGAAAGGTCTCACTCTGCAATGTAATGAGTGAACGAAGTGTAACTCTGTGAGTGAGTACTATTCCTTTTTTGGGATTTTGTTGTGGAGTGAAAGTGGCTGGCCACTAGCCCACTTGGAAGAGGAGCTTCTTTTCGTTGAGTGGTAGATTGACCCTCGTTCATTTGGTGTTGAGTGGTATCTTTGCCTATGTTCCTCTCTTCTTAGACCCTTTCTTCTGTTTGTAACACTTTAGAGAAGCCTGTGAGAGACTGTATGGGAATGAGTTGATGAGGGGAGAAGCACACACTTTTTGAGCTGTGTGGTGATGGGTAGTCAATAAATCTTGGGGAGCTGGAGCTAGGGAACCTAAGGACTTGCGACAAAAGGCACTTACAATTATCCTTGGAAATACATTTTCCATGAGGTCTCCTTTTTGGATCCAATACATTGTTATGTGGGTAATGAGAAGGAGCGTACTTCTAGGAGGATAAGTGGTTGGCAGGGAGATAGACCCATTATGGCTTTCTTAAACAAGATCTGTTCTATAGGTTGGACATCTGTGTCCTTGAGTTCTAGGGAGATAGATCCCTTTGCTCTACTTCTCCTTGTTTATAACATTTGTCCTCTATGAAAAGCCATTTTGTGGCTGTTATTTTTATTCCATTAGGGAGCTCTCACTGTTTATGAGGTTTCCTTTGTCTGTTATCCAATCATTGAATGACAAACATCTAACTCTCTTGTCTTTGATAGGAGAGTTTGTTGAGCTTAGGTCTTGGAGAAGGGACACTCACTCTTCAAATCCTAATGTCTTTAATAAATAGAATGAAACTAATGCTCAAAAGAAATATACTAAGAGTAAAAGGAGCTAAGATGACACCCGCTAAGCGCTCACAACAAGCCGAACAAGTGATCAATGTATAAAGCATTTCCCAAGCTAAAGAGAATTACGTTCAAAGATTAAATTGTATGGCCATAAACAAAGCAAAAATACAAAACCAGCCATAGAACAAGAACAAAACAGGATAACTTGAGAACATCTTATCCACAAATCAAGCTGCTGGATTATCTCTCAACCCCAGACATTGAATCTTCTTTCAAAACTGATCCCTGCAAAAAGTCTTGCAATTACACTTGAAGCTCAAGAATCTTTCAACACGACCAACTTCTACAGACTCTCAAAGCTTTTTGATTGTATTGCCATGAAATCCAGGGTTGAGTCTTTGTTGCATCTTTTGTTGGAAAAGTGTTGGAGAGGAATCCTCTTGATATTTGGTCCCTTGTTAGGTTCAATGTTCCTCTCTTGGTGCTGGTGACAAAGGCTTTTTGTAGTTATTTGTTAGGTTTCATTTTGGTTGTTTGGAGCTCAATCTTTTAGTTTTTTTATTTTGGATTTCTCAGTGGGCTTGATTTTTTTTGTATGCCCTTGTTTTCTTTTGTTTTTTCCCTCGATGAAAACTTGGTTTATTTATTTATTTACATATATTAAAAAGGATAATAATGAAAAGTGAATAAATAATTGCTTTGCTATTCCTGTGGAAATGGATTCAATGATCTGCTTTGCCTCTCACCTCTTACCTGTGCCCCTACCACCCCTATTTAACTGCTATGCCATCGGATAATATCTCTTATTCCCCCACATATTGCAGTTGTCAATTTACTGGTAGAATTGAAGAATATAAAGTTTAAAAGCTATTCTTGGTTAATAATTATTTTACACTCTATAAGAAATAAAAGTAGTTCTTTTAATACAGCAATATGCATTACGTGTGGGAAGTAGTATTTAAAGCTAAAGTAAGTGGGAAGTAGTATTTTTGTGTCCATCTGAGACTTGAGGACCATAAGTAGATTGTGCCTCTACTCAGTTATGGTGCTGTTTATAAATCTTCTGTAATGTAGACATTAGATGCAAGCTATTCTTATCTTTACCTGTGATGATTGCATGTTGCAGCTTCAAAGGTGGACCCCATGCATCTCAATTATTTCAATTTTTCTGGCCGAGTTATTGCCCTTGCTTTGATGTATAAAGTGCAAGTTGGTGTTGTCTTTGATCGTGTTTTTTTCTTGCAATTGGCTGGAATGTGTATCTCCTTAGAAGATATACGAGATGCCGATCCATGCTTGTACAATAGCTGTAAGCAGATTCTTGATATGGACCCTGGGCTTGTTGATTCAGATGCTTTAGGACTTACGTTTGTTAGTGATTTTGAGGAGCTAGGAACAAGAAAAGTTGTGGATCTTTGCCCTGGAGGCAAAGACATGGTTGTCAACAGTAAGAATCGTGAGGAATATGTTAAGCTTCTAATAGAGAACCGCTTCATGAAATCTGTCTCTGAGCAGATATCATATTTTGCAAGTGGTTTTACTGATATACTTTCTGGCAAAAGAACACACAAATGCTTTTTCCAAAGCATAGAGCTTGAAGATCTCGATTGGATGCTATATGGGAGCGAAAGTGCGATCTCTGTTGGGGATTGGAAGGCACACACTGAATATAATGGCTACAAAGAAACTGATCCTCAGATATCCTGGTTCTGGAAGGTATACATTTCTAGAATTAATTAGTAGCTTTTTCATCAGTTTTTTGCACGGCATGCTTGCTGTCCACCTAGGTCATAACTTCACAATCGGTTGACGTATCACATTTGGTTTTATGCTTTTGCATTGATTTGTCATTTTTCACAACATTTCAGGTAGTAAATGAAACTTTTTATGGATTATTAGAAGAGATTTCATATGCAAGTACTTAACCTATATATAAACTGTTGGAAATTCTTCAATGTATTATATGATGCTTCGAATGGGTCTCAGTAAGTTGTATACAATTTTGGCCTGCCCGAGGTGCATTATATTCAAACTCTCTAACTCACTCCTCTGCAATTTGTTTGTTATTTTACCACATAAATCTTTGTGTCGATCTGCATCTTTTACGTTTCTTCTTGGTTTATTTACTTGTAAAAATGAATTACCCTACTTTTCATTGCAGATTGTGTATGGGATGACACCGGAGCAGAGGAAGAATCTTCTGTTTTTCTGGACCTCATTGAAATACCTTCCAGTTCAGGGTTTTAGTGGATTGACTTCAAAGCTGTACATTTACAAATCCTCATCTCCATATGATCATCTCCCTTCTTCTCATACGTGCTTTTACCGTTTATGCTTCCCTCCTTATCCCTCCAGGTCTATCATGAAAAGTCGTCTTCAAATCATCACGCAAGAGCACGTTGGATGTAGCTTTGGTACATGGTAA ATGGGGCAGGGGAGCAGGAGAGTGCAGGCTTCAAAGGTGGACCCCATGCATCTCAATTATTTCAATTTTTCTGGCCGAGTTATTGCCCTTGCTTTGATGTATAAAGTGCAAGTTGGTGTTGTCTTTGATCGTGTTTTTTTCTTGCAATTGGCTGGAATGTGTATCTCCTTAGAAGATATACGAGATGCCGATCCATGCTTGTACAATAGCTGTAAGCAGATTCTTGATATGGACCCTGGGCTTGTTGATTCAGATGCTTTAGGACTTACGTTTGTTAGTGATTTTGAGGAGCTAGGAACAAGAAAAGTTGTGGATCTTTGCCCTGGAGGCAAAGACATGGTTGTCAACAGTAAGAATCGTGAGGAATATGTTAAGCTTCTAATAGAGAACCGCTTCATGAAATCTGTCTCTGAGCAGATATCATATTTTGCAAGTGGTTTTACTGATATACTTTCTGGCAAAAGAACACACAAATGCTTTTTCCAAAGCATAGAGCTTGAAGATCTCGATTGGATGCTATATGGGAGCGAAAGTGCGATCTCTGTTGGGGATTGGAAGGCACACACTGAATATAATGGCTACAAAGAAACTGATCCTCAGATATCCTGGTTCTGGAAGATTGTGTATGGGATGACACCGGAGCAGAGGAAGAATCTTCTGTTTTTCTGGACCTCATTGAAATACCTTCCAGTTCAGGGTTTTAGTGGATTGACTTCAAAGCTGTACATTTACAAATCCTCATCTCCATATGATCATCTCCCTTCTTCTCATACGTGCTTTTACCGTTTATGCTTCCCTCCTTATCCCTCCAGGTCTATCATGAAAAGTCGTCTTCAAATCATCACGCAAGAGCACGTTGGATGTAGCTTTGGTACATGGTAA ATGGGGCAGGGGAGCAGGAGAGTGCAGGCTTCAAAGGTGGACCCCATGCATCTCAATTATTTCAATTTTTCTGGCCGAGTTATTGCCCTTGCTTTGATGTATAAAGTGCAAGTTGGTGTTGTCTTTGATCGTGTTTTTTTCTTGCAATTGGCTGGAATGTGTATCTCCTTAGAAGATATACGAGATGCCGATCCATGCTTGTACAATAGCTGTAAGCAGATTCTTGATATGGACCCTGGGCTTGTTGATTCAGATGCTTTAGGACTTACGTTTGTTAGTGATTTTGAGGAGCTAGGAACAAGAAAAGTTGTGGATCTTTGCCCTGGAGGCAAAGACATGGTTGTCAACAGTAAGAATCGTGAGGAATATGTTAAGCTTCTAATAGAGAACCGCTTCATGAAATCTGTCTCTGAGCAGATATCATATTTTGCAAGTGGTTTTACTGATATACTTTCTGGCAAAAGAACACACAAATGCTTTTTCCAAAGCATAGAGCTTGAAGATCTCGATTGGATGCTATATGGGAGCGAAAGTGCGATCTCTGTTGGGGATTGGAAGGCACACACTGAATATAATGGCTACAAAGAAACTGATCCTCAGATATCCTGGTTCTGGAAGATTGTGTATGGGATGACACCGGAGCAGAGGAAGAATCTTCTGTTTTTCTGGACCTCATTGAAATACCTTCCAGTTCAGGGTTTTAGTGGATTGACTTCAAAGCTGTACATTTACAAATCCTCATCTCCATATGATCATCTCCCTTCTTCTCATACGTGCTTTTACCGTTTATGCTTCCCTCCTTATCCCTCCAGGTCTATCATGAAAAGTCGTCTTCAAATCATCACGCAAGAGCACGTTGGATGTAGCTTTGGTACATGGTAA MGQGSRRVQASKVDPMHLNYFNFSGRVIALALMYKVQVGVVFDRVFFLQLAGMCISLEDIRDADPCLYNSCKQILDMDPGLVDSDALGLTFVSDFEELGTRKVVDLCPGGKDMVVNSKNREEYVKLLIENRFMKSVSEQISYFASGFTDILSGKRTHKCFFQSIELEDLDWMLYGSESAISVGDWKAHTEYNGYKETDPQISWFWKIVYGMTPEQRKNLLFFWTSLKYLPVQGFSGLTSKLYIYKSSSPYDHLPSSHTCFYRLCFPPYPSRSIMKSRLQIITQEHVGCSFGTW* Homology
BLAST of Chy2G027140.1 vs. ExPASy Swiss-Prot
Match: Q9SU29 (E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis thaliana OX=3702 GN=UPL5 PE=1 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 2.0e-102 Identity = 178/285 (62.46%), Postives = 222/285 (77.89%), Query Frame = 0
BLAST of Chy2G027140.1 vs. ExPASy Swiss-Prot
Match: B8N7E5 (Probable E3 ubiquitin-protein ligase hulA OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=hulA PE=3 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 7.8e-46 Identity = 108/283 (38.16%), Postives = 156/283 (55.12%), Query Frame = 0
BLAST of Chy2G027140.1 vs. ExPASy Swiss-Prot
Match: Q2UBP1 (Probable E3 ubiquitin-protein ligase hulA OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=hulA PE=3 SV=2) HSP 1 Score: 185.7 bits (470), Expect = 7.8e-46 Identity = 108/283 (38.16%), Postives = 156/283 (55.12%), Query Frame = 0
BLAST of Chy2G027140.1 vs. ExPASy Swiss-Prot
Match: Q5BDP1 (E3 ubiquitin-protein ligase RSP5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=hulA PE=1 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.7e-45 Identity = 108/283 (38.16%), Postives = 155/283 (54.77%), Query Frame = 0
BLAST of Chy2G027140.1 vs. ExPASy Swiss-Prot
Match: Q0CCL1 (Probable E3 ubiquitin-protein ligase hulA OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=hulA PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 3.0e-45 Identity = 108/283 (38.16%), Postives = 154/283 (54.42%), Query Frame = 0
BLAST of Chy2G027140.1 vs. ExPASy TrEMBL
Match: A0A0A0KH74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511700 PE=4 SV=1) HSP 1 Score: 594.3 bits (1531), Expect = 2.7e-166 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
BLAST of Chy2G027140.1 vs. ExPASy TrEMBL
Match: A0A5D3CNH6 (E3 ubiquitin-protein ligase UPL5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005980 PE=4 SV=1) HSP 1 Score: 588.2 bits (1515), Expect = 1.9e-164 Identity = 281/284 (98.94%), Postives = 283/284 (99.65%), Query Frame = 0
BLAST of Chy2G027140.1 vs. ExPASy TrEMBL
Match: A0A1S3B104 (E3 ubiquitin-protein ligase UPL5 OS=Cucumis melo OX=3656 GN=LOC103484660 PE=4 SV=1) HSP 1 Score: 588.2 bits (1515), Expect = 1.9e-164 Identity = 281/284 (98.94%), Postives = 283/284 (99.65%), Query Frame = 0
BLAST of Chy2G027140.1 vs. ExPASy TrEMBL
Match: A0A6J1GF78 (E3 ubiquitin-protein ligase UPL5-like OS=Cucurbita moschata OX=3662 GN=LOC111453624 PE=4 SV=1) HSP 1 Score: 528.5 bits (1360), Expect = 1.8e-146 Identity = 248/283 (87.63%), Postives = 267/283 (94.35%), Query Frame = 0
BLAST of Chy2G027140.1 vs. ExPASy TrEMBL
Match: A0A6J1BUW7 (E3 ubiquitin-protein ligase UPL5 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005576 PE=4 SV=1) HSP 1 Score: 525.4 bits (1352), Expect = 1.5e-145 Identity = 248/284 (87.32%), Postives = 268/284 (94.37%), Query Frame = 0
BLAST of Chy2G027140.1 vs. NCBI nr
Match: TYK13000.1 (E3 ubiquitin-protein ligase UPL5 [Cucumis melo var. makuwa]) HSP 1 Score: 582 bits (1500), Expect = 1.36e-207 Identity = 281/284 (98.94%), Postives = 283/284 (99.65%), Query Frame = 0
BLAST of Chy2G027140.1 vs. NCBI nr
Match: XP_004134983.1 (E3 ubiquitin-protein ligase UPL5 [Cucumis sativus]) HSP 1 Score: 588 bits (1516), Expect = 1.38e-202 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
BLAST of Chy2G027140.1 vs. NCBI nr
Match: XP_008440072.1 (PREDICTED: E3 ubiquitin-protein ligase UPL5 [Cucumis melo]) HSP 1 Score: 582 bits (1500), Expect = 3.57e-200 Identity = 281/284 (98.94%), Postives = 283/284 (99.65%), Query Frame = 0
BLAST of Chy2G027140.1 vs. NCBI nr
Match: XP_038881795.1 (E3 ubiquitin-protein ligase UPL5 [Benincasa hispida]) HSP 1 Score: 562 bits (1448), Expect = 2.32e-192 Identity = 272/284 (95.77%), Postives = 278/284 (97.89%), Query Frame = 0
BLAST of Chy2G027140.1 vs. NCBI nr
Match: XP_023522098.1 (E3 ubiquitin-protein ligase UPL5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 523 bits (1346), Expect = 4.30e-177 Identity = 247/283 (87.28%), Postives = 268/283 (94.70%), Query Frame = 0
BLAST of Chy2G027140.1 vs. TAIR 10
Match: AT4G12570.1 (ubiquitin protein ligase 5 ) HSP 1 Score: 373.6 bits (958), Expect = 1.4e-103 Identity = 178/285 (62.46%), Postives = 222/285 (77.89%), Query Frame = 0
BLAST of Chy2G027140.1 vs. TAIR 10
Match: AT1G55860.1 (ubiquitin-protein ligase 1 ) HSP 1 Score: 141.0 bits (354), Expect = 1.6e-33 Identity = 92/280 (32.86%), Postives = 137/280 (48.93%), Query Frame = 0
BLAST of Chy2G027140.1 vs. TAIR 10
Match: AT1G55860.2 (ubiquitin-protein ligase 1 ) HSP 1 Score: 141.0 bits (354), Expect = 1.6e-33 Identity = 92/280 (32.86%), Postives = 137/280 (48.93%), Query Frame = 0
BLAST of Chy2G027140.1 vs. TAIR 10
Match: AT1G70320.1 (ubiquitin-protein ligase 2 ) HSP 1 Score: 139.4 bits (350), Expect = 4.5e-33 Identity = 91/280 (32.50%), Postives = 137/280 (48.93%), Query Frame = 0
BLAST of Chy2G027140.1 vs. TAIR 10
Match: AT3G53090.1 (ubiquitin-protein ligase 7 ) HSP 1 Score: 110.5 bits (275), Expect = 2.3e-24 Identity = 74/282 (26.24%), Postives = 125/282 (44.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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