Chy2G023980.1 (mRNA) Cucumber (hystrix) v1

Overview
NameChy2G023980.1
TypemRNA
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH02: 938434 .. 939880 (+)
Sequence length203
RNA-Seq ExpressionChy2G023980.1
SyntenyChy2G023980.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTGGTAAGTGAATATTTAAATATAATTTGGTATTAATTAAGGTAAAGTAGATAGTCTTTAATCTTGGTTAGTATTATTATTGAAAGAGGAGCATATTTAAAGAAAGGAACGGCGGAGTGTCGGAGCTTTACCGATGAGCCCGGTGACCCCAATAAATAAATAAATAAAAAGAAAGAAAGAAAGAAAGAAAGAAAATATCTTCACCTATTATTCACTCTCCTTCTCCACTTCTTCACTTATTTCTCAACTTCTCTTTCTTTTTCTCTTTCAATTTTTCCCGCCGTTCTGCTTCGATTATCTTCTTCCCGGACTGTAGATTCGATTGTTTTCCTTCAGAAGGATCGGCATCAATTCTCTATTATCTGAGAAATTCCGCAGTCTTTATATCTGTTGCGGTGAGAATTGACTAACGAATCGTCTAAACTTGGAGTTTATTGATTTTAATTTTTTAGCTAATGGTATGAACTTCTAATGTGATTTGAACTTTTGTGTTACTTGGAGTTTGAGGAGGAGGAGGAGAAAACTTTTGTGTTACATGCTAGTGATTGAGATTGAGCTACTAGCTAGCGGGATTTTCTGTATCTTGTAGTTGAGGTATATTTGTTGTTCAGAGAATGATAATCTTGCTGGATGAATGTGAATCTAATTTAGGCTCGGAAGGTTTAGTTTCTATTTTGTGATTGTGCATTTTTTTTTTGTCGATGGCTTTGAGGAATTTGTCTTTAGCTTTCATTTTTCTGTTTGACTGGAATTTTGAGCATGAAGAAGCAGATTTTCTACTGGTAGTGGTTAATTTTGGTTTAAGAGATTGCAGATCTGTAAAGGTTTTTGGACGTAGCTAAGAGATTTGAGGATGTTAAACAACAAATAAAAAGAAAATCTAGGATATGTAAGTTCTCTAGGTTTAGTTCTTTGCCTCTCAGCGATGAACACCTGTCACCCAAATAATTGATGTATGCATAATGCGTTCTCCGGACCCAACATTGTCTTCCAGCTCGATAAATTTAATAGTTTCTTGTTTGTGATTGTGTGGATAATTTGGAACATGAATTTGTTAGTTTCTTTTAATTATTTTTTAACAAATATTTCTCACGAGTTGTCGTGTTAATGTTAATTTGTCTGCCATTTTTACGACCAGTGATGAATCTTTAAATACTGCTCAAGGGAAGTATCGTTAGCTTAGATCCGTGAGTTCTTGCTCTATTTCCCTACTTTTTGCTTTCAAAAATGTTTTTCCGAAGAAAAAAACGAAGAAAGGAGGTGAAATCCAGCCATTTTAGACAGTGTAGATAAGGCTCGAAGGTTGAGAGTTTTTCTCTAAAACGGATATTTAACACATTTGTAAAAGCTTATTCTTTTAAAACCCGCTTTAAAGAGACGGGGTGTCAACTCTCTTTCTTCTCTGTCATTGTAGGTTTTAAGACGAGGTTTGCAGATTTGA

mRNA sequence

ATGAAAGTGTTCTTCACTTATTTCTCAACTTCTCTTTCTTTTTCTCTTTCAATTTTTCCCGCCGTTCTGCTTCGATTATCTTCTTCCCGGACTGTAGATTCGATTGTTTTCCTTCAGAAGGATCGGCATCAATTCTCTATTATCTGAGAAATTCCGCAGTCTTTATATCTGTTGCGGTTTTAAGACGAGGTTTGCAGATTTGA

Coding sequence (CDS)

ATGAAAGTGTTCTTCACTTATTTCTCAACTTCTCTTTCTTTTTCTCTTTCAATTTTTCCCGCCGTTCTGCTTCGATTATCTTCTTCCCGGACTGTAGATTCGATTGTTTTCCTTCAGAAGGATCGGCATCAATTCTCTATTATCTGAGAAATTCCGCAGTCTTTATATCTGTTGCGGTTTTAAGACGAGGTTTGCAGATTTGA

Protein sequence

MKVFFTYFSTSLSFSLSIFPAVLLRLSSSRTVDSIVFLQKDRHQFSII*EIPQSLYLLRF*DEVCRFX
Homology
The following BLAST results are available for this feature:
BLAST of Chy2G023980.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy2G023980.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy2G023980.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy2G023980.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Chy2G023980Chy2G023980gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Chy2G023980.1.exon1Chy2G023980.1.exon1exon
Chy2G023980.1.exon2Chy2G023980.1.exon2exon
Chy2G023980.1.exon3Chy2G023980.1.exon3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Chy2G023980.1.cds1Chy2G023980.1.cds1CDS
Chy2G023980.1.cds2Chy2G023980.1.cds2CDS
Chy2G023980.1.cds3Chy2G023980.1.cds3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Chy2G023980.1Chy2G023980.1-proteinpolypeptide