Chy1G009220.1 (mRNA) Cucumber (hystrix) v1

Overview
NameChy1G009220.1
TypemRNA
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH01: 8614166 .. 8615073 (+)
Sequence length378
RNA-Seq ExpressionChy1G009220.1
SyntenyChy1G009220.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGGTAATCAAATCGACCAATTTTCTAACGCTACATATGATCAAATGGTTAACAATGTTGCTACTAACTCGATTGGAACTTCACTTCCAGTAAGGTCTTTAATTGTTTATTTCTAATACTTTATTTCTAATTGTTATAACTTGCTCATTATGCTTAATATTGCATTTTATATTGCCTTGTTGGTATAGAGTATTAATAACAACAATACTCTTTGCAAGTGCACATTACTAGATTGAGGTGGTTGCTGAAGTTCGATGGTCATCAAATGATCATAAAGTTACTATTCTCCATGTTCCTCTCAGTTCACACGTTGTTAGAGTTTGGACGGACTTGCCAAAGAAGTCGGATGCATTTTTATGGAGACCTAACTCAAAGATGACATACGTTGAGGATGTTGTTGGAAGCACAGTAGCATGGCCTTTTTGACAAAGTTATTTTAAGTATGTACATTCTTTAACTATTAACTTCTAGCTAGCGTTTTGAACTAAAATTTTTGTGTATAACCTTAATTATTCATTTAGTTTTTGTTCATAATTTTTTTGTAGGTTGATAAAAAAACAATTGTACAAAGCCCAAGAATGTCATTACCAAGACACAACAAGCTTCAAGTATTTAGATTTATATATTATAACAAATTTTGTAACTAATGAATGGTATAGGTTGATCATTGTGTTGTGTTAAATGATACTAGTGACTATCTTTTGTGAGAATACTTAACCACATAAATAGTGCTAGCATTTTGTGCAAGGTAATATAAATCTTTTGTGAAAATAACATAAATAACATTTTGATGGTACAAACTCTTTCTATATTATAAGGATCATTTTTTGTTATTTGACATTTTATTAGCCAACAATGTATGAGACATGAACAATAGCCTTTTAAATAGATTTCCTTCACATAACTGG

mRNA sequence

AGGGTAATCAAATCGACCAATTTTCTAACGCTACATATGATCAAATGGTTAACAATGTTGCTACTAACTCGATTGGAACTTCACTTCCAGTAAGATTGAGGTGGTTGCTGAAGTTCGATGGTCATCAAATGATCATAAAGTTACTATTCTCCATGTTCCTCTCAGTTCACACGTTGTTAGAGTTTGGACGGACTTGCCAAAGAAGTCGGATGCATTTTTATGGAGACCTAACTCAAAGATGACATACGTTGAGGATGTTGATAAAAAAACAATTGTACAAAGCCCAAGAATGTCATTACCAAGACACAACAAGCTTCAACCAACAATGTATGAGACATGAACAATAGCCTTTTAAATAGATTTCCTTCACATAACTGG

Coding sequence (CDS)

AGGGTAATCAAATCGACCAATTTTCTAACGCTACATATGATCAAATGGTTAACAATGTTGCTACTAACTCGATTGGAACTTCACTTCCAGTAAGATTGAGGTGGTTGCTGAAGTTCGATGGTCATCAAATGATCATAAAGTTACTATTCTCCATGTTCCTCTCAGTTCACACGTTGTTAGAGTTTGGACGGACTTGCCAAAGAAGTCGGATGCATTTTTATGGAGACCTAACTCAAAGATGACATACGTTGAGGATGTTGATAAAAAAACAATTGTACAAAGCCCAAGAATGTCATTACCAAGACACAACAAGCTTCAACCAACAATGTATGAGACATGAACAATAGCCTTTTAAATAGATTTCCTTCACATAACTGG

Protein sequence

RVIKSTNFLTLHMIKWLTMLLLTRLELHFQ*D*GGC*SSMVIK*S*SYYSPCSSQFTRC*SLDGLAKEVGCIFMET*LKDDIR*GC**KNNCTKPKNVITKTQQASTNNV*DMNNSLLNRFPSHNW
Homology
The following BLAST results are available for this feature:
BLAST of Chy1G009220.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy1G009220.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy1G009220.1 vs.
Match NameE-valueIdentityDescription
BLAST of Chy1G009220.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Chy1G009220Chy1G009220gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Chy1G009220.1.exon1Chy1G009220.1.exon1exon
Chy1G009220.1.exon2Chy1G009220.1.exon2exon
Chy1G009220.1.exon3Chy1G009220.1.exon3exon
Chy1G009220.1.exon4Chy1G009220.1.exon4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Chy1G009220.1.cds1Chy1G009220.1.cds1CDS
Chy1G009220.1.cds2Chy1G009220.1.cds2CDS
Chy1G009220.1.cds3Chy1G009220.1.cds3CDS
Chy1G009220.1.cds4Chy1G009220.1.cds4CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Chy1G009220.1Chy1G009220.1-proteinpolypeptide