Chy12G218790.1 (mRNA) Cucumber (hystrix) v1

Overview
NameChy12G218790.1
TypemRNA
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH12: 17331544 .. 17332504 (+)
Sequence length961
RNA-Seq ExpressionChy12G218790.1
SyntenyChy12G218790.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCTGTCTCTGTGTGTCTTTAAAACTCAACCCCAACAAAATTCTGCCCTTTGAGATCCAAAATGAGTGAATGTACAAAATAGAACCAAAACCAAAACAAAAGGGGTTTGTCATTTTGTGGAGAGTATTATGGTTATGGAGATTGTTGTATCAGCTGTTCTGTTAGTGGTTGGAATAGCTGTTTTAGTTGTAATTCATGTTTGTATTGTTGGGAGAGCTTTAAGAGAAGAAGGAATTTGGAGAAGTGATAATAATAATAACAATAGTTATGGAATGAAGAGATTTTCAAATGAAGATTTGGAGAAGATTCCTTGTTATGAGTACGGCAACAAACTGGAGGATTTTGAAATGGAATGTGTGGTTTGTTTGGAGAATTTCAAAATGGGGGAAAGATGCAGATTGCTGCCTAATTGTAATCATAGTTTTCATGTTCATTGTATAGATTCTTGGCTTTTGAACAAACCCATTTGCCCAATTTGTAGAACTTTTGCTGCTGTTCTTCCTAAAATTTCATTGATTCAATTGAATTGATTTGGTTCATGGTTCTGATTTTGCTGCCACTTGTGGTGGCCGGGCCGGAGGAAGTCGACGTTCACAAGAAGCCCCAACGTCTGCGGTGACAAAGTTGTAGAGTATGGCTAAGAGAAGAAGAAGATGAAGAACTCTTTTTTGTGGATGAATATTGTTCTTGTTTGTAACTTCTTTCTGTTGTTTTGTATTATTCAGTTTCGTAATGAATAAGAATGTGGACTATTTTTCTTCAGTTAGTTTGTGATTGGAAGATTTATGGAATTGAATTTAACGTCGTATTTGTAGCATTTTGTTTTCGTCAAAAATCTTTTTTTCTTCTTTCGATCTTATTCGTTAATTCTTAGAACTCAAGGATGTAGTTGTACAAACTATATAGAATCCCATTCAAATGAGAAGGTAATTGTATTTTCAAATTCTCTTAATCTCCTT

mRNA sequence

CTCTCTGTCTCTGTGTGTCTTTAAAACTCAACCCCAACAAAATTCTGCCCTTTGAGATCCAAAATGAGTGAATGTACAAAATAGAACCAAAACCAAAACAAAAGGGGTTTGTCATTTTGTGGAGAGTATTATGGTTATGGAGATTGTTGTATCAGCTGTTCTGTTAGTGGTTGGAATAGCTGTTTTAGTTGTAATTCATGTTTGTATTGTTGGGAGAGCTTTAAGAGAAGAAGGAATTTGGAGAAGTGATAATAATAATAACAATAGTTATGGAATGAAGAGATTTTCAAATGAAGATTTGGAGAAGATTCCTTGTTATGAGTACGGCAACAAACTGGAGGATTTTGAAATGGAATGTGTGGTTTGTTTGGAGAATTTCAAAATGGGGGAAAGATGCAGATTGCTGCCTAATTGTAATCATAGTTTTCATGTTCATTGTATAGATTCTTGGCTTTTGAACAAACCCATTTGCCCAATTTGTAGAACTTTTGCTGCTGTTCTTCCTAAAATTTCATTGATTCAATTGAATTGATTTGGTTCATGGTTCTGATTTTGCTGCCACTTGTGGTGGCCGGGCCGGAGGAAGTCGACGTTCACAAGAAGCCCCAACGTCTGCGGTGACAAAGTTGTAGAGTATGGCTAAGAGAAGAAGAAGATGAAGAACTCTTTTTTGTGGATGAATATTGTTCTTGTTTGTAACTTCTTTCTGTTGTTTTGTATTATTCAGTTTCGTAATGAATAAGAATGTGGACTATTTTTCTTCAGTTAGTTTGTGATTGGAAGATTTATGGAATTGAATTTAACGTCGTATTTGTAGCATTTTGTTTTCGTCAAAAATCTTTTTTTCTTCTTTCGATCTTATTCGTTAATTCTTAGAACTCAAGGATGTAGTTGTACAAACTATATAGAATCCCATTCAAATGAGAAGGTAATTGTATTTTCAAATTCTCTTAATCTCCTT

Coding sequence (CDS)

CTCTCTGTCTCTGTGTGTCTTTAAAACTCAACCCCAACAAAATTCTGCCCTTTGAGATCCAAAATGAGTGAATGTACAAAATAGAACCAAAACCAAAACAAAAGGGGTTTGTCATTTTGTGGAGAGTATTATGGTTATGGAGATTGTTGTATCAGCTGTTCTGTTAGTGGTTGGAATAGCTGTTTTAGTTGTAATTCATGTTTGTATTGTTGGGAGAGCTTTAAGAGAAGAAGGAATTTGGAGAAGTGATAATAATAATAACAATAGTTATGGAATGAAGAGATTTTCAAATGAAGATTTGGAGAAGATTCCTTGTTATGAGTACGGCAACAAACTGGAGGATTTTGAAATGGAATGTGTGGTTTGTTTGGAGAATTTCAAAATGGGGGAAAGATGCAGATTGCTGCCTAATTGTAATCATAGTTTTCATGTTCATTGTATAGATTCTTGGCTTTTGAACAAACCCATTTGCCCAATTTGTAGAACTTTTGCTGCTGTTCTTCCTAAAATTTCATTGATTCAATTGAATTGATTTGGTTCATGGTTCTGATTTTGCTGCCACTTGTGGTGGCCGGGCCGGAGGAAGTCGACGTTCACAAGAAGCCCCAACGTCTGCGGTGACAAAGTTGTAGAGTATGGCTAAGAGAAGAAGAAGATGAAGAACTCTTTTTTGTGGATGAATATTGTTCTTGTTTGTAACTTCTTTCTGTTGTTTTGTATTATTCAGTTTCGTAATGAATAAGAATGTGGACTATTTTTCTTCAGTTAGTTTGTGATTGGAAGATTTATGGAATTGAATTTAACGTCGTATTTGTAGCATTTTGTTTTCGTCAAAAATCTTTTTTTCTTCTTTCGATCTTATTCGTTAATTCTTAGAACTCAAGGATGTAGTTGTACAAACTATATAGAATCCCATTCAAATGAGAAGGTAATTGTATTTTCAAATTCTCTTAATCTCCTT

Protein sequence

LSVSVCL*NSTPTKFCPLRSKMSECTK*NQNQNKRGLSFCGEYYGYGDCCISCSVSGWNSCFSCNSCLYCWESFKRRRNLEK*****Q*LWNEEIFK*RFGEDSLL*VRQQTGGF*NGMCGLFGEFQNGGKMQIAA*L*S*FSCSLYRFLAFEQTHLPNL*NFCCCSS*NFIDSIELIWFMVLILLPLVVAGPEEVDVHKKPQRLR*QSCRVWLREEEDEELFFVDEYCSCL*LLSVVLYYSVS**IRMWTIFLQLVCDWKIYGIEFNVVFVAFCFRQKSFFLLSILFVNS*NSRM*LYKLYRIPFK*EGNCIFKFS*SPX
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Chy12G218790Chy12G218790gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Chy12G218790.1.exon1Chy12G218790.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Chy12G218790.1.cds1Chy12G218790.1.cds1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Chy12G218790.1Chy12G218790.1-proteinpolypeptide