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Chy11G189850.1 (mRNA) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGTTGTGCAGAAAGAAAAATCTTCAGTGAAGAACAAGAAGCTCTTGTGATCAAATCATGGAGTGTCATGAAAAAGAATGCTCCTGATTTGGCTTTCAAATTCTTCCTCAAGTATAATTACTTTACACTTCTTTTTCATTTTCATATTTACGCTTGATAGAAAGATTCGTCTTTTTTTAGATTGAATATTCTTTGGATTGTTTAGGATATTTGAGATTGCACCTTCTGCTCAAAAAATGTTTCCCTTTCTAAGAGACTCAAAAGTTCCATTGGAGCAAAATCCAAAGTTGAAACCTCATGCTTTGAATGTCTTTACTTTGGTAAGTTTGTAAAACTTTTTTTTTGTTAGAGTTGAGTTATTTCTAGTGGAGTTCGTTAAAACCACTTTTGTTAAACGTGCATTTAACCAAAAGTGATTTTAATCATTTCACTATTACTCTCCAACCTACTAATAATTTTCCATGAATTCAGTTGATTAACAATATAACTTGCTTTGAATTTTGTAGACTTGCGAGTCAGCCGTTCAACTTCGAAAAGGTGGCATAGCAGCTGCAAAAGAAAGCACCATGAAGAGGCTAGGTGCTAGTCACCTTAAGTACGGTGTTCTTGACGAACATTTTGAGGTAGCTTCGTATTCTATTTTGTTGTCCAAACTTCAAAACTCTATTGTAATAATTCCGATCTCGACGAAGACGACTTTATTAATTTTGTTTGTTTGATTGATAGGTGACAAAATTTGCTCTTTTGGAGACGATAAAGGAAGGAATTCCAGAAATGTGGAGTGTGGAGATGAAAGGGGCATGGGCTGAAGCCTATGATCAATTGGTTTCTGCCATTAAAGCTCAGATGAAGCCTTGA ATGGGAAGTTGTGCAGAAAGAAAAATCTTCAGTGAAGAACAAGAAGCTCTTGTGATCAAATCATGGAGTGTCATGAAAAAGAATGCTCCTGATTTGGCTTTCAAATTCTTCCTCAAGATATTTGAGATTGCACCTTCTGCTCAAAAAATGTTTCCCTTTCTAAGAGACTCAAAAGTTCCATTGGAGCAAAATCCAAAGTTGAAACCTCATGCTTTGAATGTCTTTACTTTGACTTGCGAGTCAGCCGTTCAACTTCGAAAAGGTGGCATAGCAGCTGCAAAAGAAAGCACCATGAAGAGGCTAGGTGCTAGTCACCTTAAGTACGGTGTTCTTGACGAACATTTTGAGGTGACAAAATTTGCTCTTTTGGAGACGATAAAGGAAGGAATTCCAGAAATGTGGAGTGTGGAGATGAAAGGGGCATGGGCTGAAGCCTATGATCAATTGGTTTCTGCCATTAAAGCTCAGATGAAGCCTTGA ATGGGAAGTTGTGCAGAAAGAAAAATCTTCAGTGAAGAACAAGAAGCTCTTGTGATCAAATCATGGAGTGTCATGAAAAAGAATGCTCCTGATTTGGCTTTCAAATTCTTCCTCAAGATATTTGAGATTGCACCTTCTGCTCAAAAAATGTTTCCCTTTCTAAGAGACTCAAAAGTTCCATTGGAGCAAAATCCAAAGTTGAAACCTCATGCTTTGAATGTCTTTACTTTGACTTGCGAGTCAGCCGTTCAACTTCGAAAAGGTGGCATAGCAGCTGCAAAAGAAAGCACCATGAAGAGGCTAGGTGCTAGTCACCTTAAGTACGGTGTTCTTGACGAACATTTTGAGGTGACAAAATTTGCTCTTTTGGAGACGATAAAGGAAGGAATTCCAGAAATGTGGAGTGTGGAGATGAAAGGGGCATGGGCTGAAGCCTATGATCAATTGGTTTCTGCCATTAAAGCTCAGATGAAGCCTTGA MGSCAERKIFSEEQEALVIKSWSVMKKNAPDLAFKFFLKIFEIAPSAQKMFPFLRDSKVPLEQNPKLKPHALNVFTLTCESAVQLRKGGIAAAKESTMKRLGASHLKYGVLDEHFEVTKFALLETIKEGIPEMWSVEMKGAWAEAYDQLVSAIKAQMKP* Homology
BLAST of Chy11G189850.1 vs. ExPASy Swiss-Prot
Match: Q9FVL0 (Non-symbiotic hemoglobin 1 OS=Medicago sativa OX=3879 GN=MHB1 PE=2 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 2.7e-61 Identity = 112/154 (72.73%), Postives = 133/154 (86.36%), Query Frame = 0
BLAST of Chy11G189850.1 vs. ExPASy Swiss-Prot
Match: Q947C5 (Non-symbiotic hemoglobin 1 OS=Gossypium hirsutum OX=3635 GN=HB1 PE=2 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 1.4e-60 Identity = 111/153 (72.55%), Postives = 131/153 (85.62%), Query Frame = 0
BLAST of Chy11G189850.1 vs. ExPASy Swiss-Prot
Match: P23244 (Hemoglobin-2 OS=Casuarina glauca OX=3522 GN=HBII PE=3 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 8.8e-60 Identity = 112/157 (71.34%), Postives = 131/157 (83.44%), Query Frame = 0
BLAST of Chy11G189850.1 vs. ExPASy Swiss-Prot
Match: P68168 (Non-legume hemoglobin OS=Parasponia andersonii OX=3476 PE=1 SV=2) HSP 1 Score: 229.6 bits (584), Expect = 2.6e-59 Identity = 110/159 (69.18%), Postives = 131/159 (82.39%), Query Frame = 0
BLAST of Chy11G189850.1 vs. ExPASy Swiss-Prot
Match: P68169 (Non-legume hemoglobin OS=Parasponia rigida OX=3477 PE=1 SV=2) HSP 1 Score: 229.6 bits (584), Expect = 2.6e-59 Identity = 110/159 (69.18%), Postives = 131/159 (82.39%), Query Frame = 0
BLAST of Chy11G189850.1 vs. ExPASy TrEMBL
Match: A0A0A0LLW6 (GLOBIN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G238880 PE=3 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 2.9e-82 Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0
BLAST of Chy11G189850.1 vs. ExPASy TrEMBL
Match: A0A5D3CTW6 (Plastid division protein PDV2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001460 PE=3 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 6.7e-79 Identity = 150/159 (94.34%), Postives = 156/159 (98.11%), Query Frame = 0
BLAST of Chy11G189850.1 vs. ExPASy TrEMBL
Match: A0A1S4E332 (plastid division protein PDV2 OS=Cucumis melo OX=3656 GN=LOC103498462 PE=3 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 6.7e-79 Identity = 150/159 (94.34%), Postives = 156/159 (98.11%), Query Frame = 0
BLAST of Chy11G189850.1 vs. ExPASy TrEMBL
Match: A0A5A7TVN3 (Plastid division protein PDV2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004930 PE=3 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 9.7e-78 Identity = 148/159 (93.08%), Postives = 155/159 (97.48%), Query Frame = 0
BLAST of Chy11G189850.1 vs. ExPASy TrEMBL
Match: A0A6J1KWX0 (plastid division protein PDV2-like OS=Cucurbita maxima OX=3661 GN=LOC111499505 PE=3 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 4.2e-73 Identity = 137/159 (86.16%), Postives = 152/159 (95.60%), Query Frame = 0
BLAST of Chy11G189850.1 vs. NCBI nr
Match: KGN61772.1 (hypothetical protein Csa_006184 [Cucumis sativus]) HSP 1 Score: 314 bits (805), Expect = 6.04e-108 Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0
BLAST of Chy11G189850.1 vs. NCBI nr
Match: TYK13639.1 (plastid division protein PDV2 [Cucumis melo var. makuwa]) HSP 1 Score: 303 bits (776), Expect = 1.60e-103 Identity = 150/159 (94.34%), Postives = 156/159 (98.11%), Query Frame = 0
BLAST of Chy11G189850.1 vs. NCBI nr
Match: XP_031736713.1 (plastid division protein PDV2 [Cucumis sativus]) HSP 1 Score: 314 bits (805), Expect = 2.21e-103 Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0
BLAST of Chy11G189850.1 vs. NCBI nr
Match: XP_016902385.1 (PREDICTED: plastid division protein PDV2 [Cucumis melo]) HSP 1 Score: 303 bits (776), Expect = 4.57e-99 Identity = 150/159 (94.34%), Postives = 156/159 (98.11%), Query Frame = 0
BLAST of Chy11G189850.1 vs. NCBI nr
Match: KAA0045947.1 (plastid division protein PDV2 [Cucumis melo var. makuwa]) HSP 1 Score: 299 bits (766), Expect = 1.14e-97 Identity = 148/159 (93.08%), Postives = 155/159 (97.48%), Query Frame = 0
BLAST of Chy11G189850.1 vs. TAIR 10
Match: AT2G16060.1 (hemoglobin 1 ) HSP 1 Score: 225.7 bits (574), Expect = 2.6e-59 Identity = 106/149 (71.14%), Postives = 127/149 (85.23%), Query Frame = 0
BLAST of Chy11G189850.1 vs. TAIR 10
Match: AT3G10520.1 (haemoglobin 2 ) HSP 1 Score: 161.4 bits (407), Expect = 6.1e-40 Identity = 77/149 (51.68%), Postives = 109/149 (73.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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