CcUC11G222750.1 (mRNA) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCAGATTCGTTCCTAAATTGCTGGCTCTCTTTTATCTCCTCCTTCTCCACTTCCCCTCCTTCACTTCTTCGTCTTCTTCTCTAGAAACCAGAACCGGTTTTTCTGTTCTGGTTTTATAAATTACAAGAAAAGAAATCTTCTTTTTTTAAAAAAGATGTCTTTGGGGAAGAGGTCACGTGCTCCGATGAGAAAAACGCCGAGCATGACAGAGATCACCTTCGATCTGGGTGGCTCCGCCGCTGAACAATTCCCGCCGTCGCTCGGTTATCCGACGAACACCCAAAAATCAGGCTACCAACAAATGATATCCCCAAGAAATTACAGAAGGCATTCGATTGATATACAAGAAAACGCTAGTTTCCTCAGAGCTTGTTCTCTTTGCACCCGCCCTCTCGTTCCTGGTCGAGATATTTACATGTACAGGTAAATCAATTTCAATCTAATTTAATCCAATAATCCCAAAATTTATATTCTATTTATGATTTTTTTTTTTTTTGTTGGGTTTTGTAATGAAACTGAAGTGGACTCTGTTTTTAGGGGGAACAGGGGATTTTGTAGCGACGAATGTAGACAAAAGCAAATGAAGCAAGATGAGAAAATGGAGAGGTGCAATTTAGCGACAAAGAAAGCAGCAGCAGCAGCAGCAACGGCGGCGGCTGTGGTGGTGATTTCTACATCGGCCGCCGTTCCACCACAGATCTCCGGCAAGGGAGAAACGGTAGCTGCTTTATAGTGTTGATGGATGGATTTTTGTGTGCTTAATGTTGTTGTTTCTCTTTATCTATCTTCTAAGCAATATTCCCAAAAATTCATCCCTTTTTCCCAAAGCATTTTATTTTCTTTCTTCATTATTGAGAATGGAAATGGGATTAATTCCTTTAAACAAATTAAGATAAAAGGGGTCGATTTTGATGCC ACCAGATTCGTTCCTAAATTGCTGGCTCTCTTTTATCTCCTCCTTCTCCACTTCCCCTCCTTCACTTCTTCGTCTTCTTCTCTAGAAACCAGAACCGGTTTTTCTGTTCTGGTTTTATAAATTACAAGAAAAGAAATCTTCTTTTTTTAAAAAAGATGTCTTTGGGGAAGAGGTCACGTGCTCCGATGAGAAAAACGCCGAGCATGACAGAGATCACCTTCGATCTGGGTGGCTCCGCCGCTGAACAATTCCCGCCGTCGCTCGGTTATCCGACGAACACCCAAAAATCAGGCTACCAACAAATGATATCCCCAAGAAATTACAGAAGGCATTCGATTGATATACAAGAAAACGCTAGTTTCCTCAGAGCTTGTTCTCTTTGCACCCGCCCTCTCGTTCCTGGTCGAGATATTTACATGTACAGGGGGAACAGGGGATTTTGTAGCGACGAATGTAGACAAAAGCAAATGAAGCAAGATGAGAAAATGGAGAGGTGCAATTTAGCGACAAAGAAAGCAGCAGCAGCAGCAGCAACGGCGGCGGCTGTGGTGGTGATTTCTACATCGGCCGCCGTTCCACCACAGATCTCCGGCAAGGGAGAAACGGTAGCTGCTTTATAGTGTTGATGGATGGATTTTTGTGTGCTTAATGTTGTTGTTTCTCTTTATCTATCTTCTAAGCAATATTCCCAAAAATTCATCCCTTTTTCCCAAAGCATTTTATTTTCTTTCTTCATTATTGAGAATGGAAATGGGATTAATTCCTTTAAACAAATTAAGATAAAAGGGGTCGATTTTGATGCC ATGTCTTTGGGGAAGAGGTCACGTGCTCCGATGAGAAAAACGCCGAGCATGACAGAGATCACCTTCGATCTGGGTGGCTCCGCCGCTGAACAATTCCCGCCGTCGCTCGGTTATCCGACGAACACCCAAAAATCAGGCTACCAACAAATGATATCCCCAAGAAATTACAGAAGGCATTCGATTGATATACAAGAAAACGCTAGTTTCCTCAGAGCTTGTTCTCTTTGCACCCGCCCTCTCGTTCCTGGTCGAGATATTTACATGTACAGGGGGAACAGGGGATTTTGTAGCGACGAATGTAGACAAAAGCAAATGAAGCAAGATGAGAAAATGGAGAGGTGCAATTTAGCGACAAAGAAAGCAGCAGCAGCAGCAGCAACGGCGGCGGCTGTGGTGGTGATTTCTACATCGGCCGCCGTTCCACCACAGATCTCCGGCAAGGGAGAAACGGTAGCTGCTTTATAG MSLGKRSRAPMRKTPSMTEITFDLGGSAAEQFPPSLGYPTNTQKSGYQQMISPRNYRRHSIDIQENASFLRACSLCTRPLVPGRDIYMYRGNRGFCSDECRQKQMKQDEKMERCNLATKKAAAAAATAAAVVVISTSAAVPPQISGKGETVAAL Homology
BLAST of CcUC11G222750.1 vs. NCBI nr
Match: XP_038898979.1 (FCS-Like Zinc finger 6-like [Benincasa hispida]) HSP 1 Score: 275.4 bits (703), Expect = 3.0e-70 Identity = 139/155 (89.68%), Postives = 149/155 (96.13%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. NCBI nr
Match: XP_008444103.1 (PREDICTED: uncharacterized protein LOC103487542 [Cucumis melo]) HSP 1 Score: 258.8 bits (660), Expect = 2.9e-65 Identity = 132/155 (85.16%), Postives = 144/155 (92.90%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. NCBI nr
Match: XP_004150522.1 (FCS-Like Zinc finger 6 [Cucumis sativus] >KGN54618.1 hypothetical protein Csa_012886 [Cucumis sativus]) HSP 1 Score: 257.7 bits (657), Expect = 6.4e-65 Identity = 131/155 (84.52%), Postives = 143/155 (92.26%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. NCBI nr
Match: XP_022975921.1 (uncharacterized protein LOC111476480 [Cucurbita maxima]) HSP 1 Score: 234.6 bits (597), Expect = 5.8e-58 Identity = 122/154 (79.22%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. NCBI nr
Match: KAA0040729.1 (senescence-associated family protein [Cucumis melo var. makuwa] >TYK21126.1 senescence-associated family protein [Cucumis melo var. makuwa]) HSP 1 Score: 230.7 bits (587), Expect = 8.4e-57 Identity = 117/139 (84.17%), Postives = 128/139 (92.09%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.0e-21 Identity = 71/174 (40.80%), Postives = 94/174 (54.02%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.3e-17 Identity = 65/157 (41.40%), Postives = 89/157 (56.69%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. ExPASy Swiss-Prot
Match: F4JW68 (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 5.4e-14 Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.0e-12 Identity = 48/120 (40.00%), Postives = 61/120 (50.83%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 8.0e-10 Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. ExPASy TrEMBL
Match: A0A1S3B9M7 (uncharacterized protein LOC103487542 OS=Cucumis melo OX=3656 GN=LOC103487542 PE=3 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65 Identity = 132/155 (85.16%), Postives = 144/155 (92.90%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. ExPASy TrEMBL
Match: A0A0A0KYN7 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G378780 PE=3 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 3.1e-65 Identity = 131/155 (84.52%), Postives = 143/155 (92.26%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. ExPASy TrEMBL
Match: A0A6J1IFI1 (uncharacterized protein LOC111476480 OS=Cucurbita maxima OX=3661 GN=LOC111476480 PE=3 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.8e-58 Identity = 122/154 (79.22%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. ExPASy TrEMBL
Match: A0A5D3DC40 (Senescence-associated family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45680G00010 PE=3 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 4.1e-57 Identity = 117/139 (84.17%), Postives = 128/139 (92.09%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. ExPASy TrEMBL
Match: A0A6J1FAL0 (uncharacterized protein LOC111443579 OS=Cucurbita moschata OX=3662 GN=LOC111443579 PE=3 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.9e-55 Identity = 120/155 (77.42%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 103.6 bits (257), Expect = 1.4e-22 Identity = 71/174 (40.80%), Postives = 94/174 (54.02%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18 Identity = 65/157 (41.40%), Postives = 89/157 (56.69%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. TAIR 10
Match: AT4G39795.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 79.0 bits (193), Expect = 3.8e-15 Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 72.4 bits (176), Expect = 3.6e-13 Identity = 48/120 (40.00%), Postives = 61/120 (50.83%), Query Frame = 0
BLAST of CcUC11G222750.1 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 65.1 bits (157), Expect = 5.7e-11 Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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