CcUC10G198900.1 (mRNA) Watermelon (PI 537277) v1

Overview
NameCcUC10G198900.1
TypemRNA
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr10: 25731062 .. 25731625 (+)
Sequence length446
RNA-Seq ExpressionCcUC10G198900.1
SyntenyCcUC10G198900.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCGAGACGTCCCCCACATTCTTCACCCCAAGTGAAAACCTCACCTTGCCTCGTTACAAGAGCAATGTGTCGGACACCGCAAGCAATCTGATGAACATCAAGAACAACATTCGTCTCCAATGGCTTGGGAGTGAGCACATCATTTTTAACTGGTATTGGACTTGAAGTTCCATCTGGTAAAACTAAATCAGACCAAATCTCTCCCCATACGTAAACATCACCTAATGATTCTATATCATCTGGTCCAGATCCTCCACTTGAACAACTAGGAGTGCTTGATACACTGCTGCGGAAACCATCTCCACCACTTGTTCTTAGTTGCATATTTGCACGTTCCGAACCAACATCTGAACTTACCAGATGCAAAGGAGATTCACGAGAATTTAAATCAATAGAATCCCTTCCACGAGCTATGCTGTTACTAAATTCTAAAGTTGCACCAAAAGGTCGACTACTTTGAAAGAAGTCGCTAGCATCCTGAACCTGGAAAATAATGATCAATGGTAAATTATAAATTTTTTTGATAGGATAGCTTAGAAAATTAGGTACATGATAACCAGC

mRNA sequence

ATGACCGAGACGTCCCCCACATTCTTCACCCCAAGTGAAAACCTCACCTTGCCTCGTTACAAGAGCAATGTGTCGGACACCGCAAGCAATCTGATGAACATCAAGAACAACATTCGTCTCCAATGGCTTGGGAATCCTCCACTTGAACAACTAGGAGTGCTTGATACACTGCTGCGGAAACCATCTCCACCACTTGTTCTTAGTTGCATATTTGCACGTTCCGAACCAACATCTGAACTTACCAGATGCAAAGGAGATTCACGAGAATTTAAATCAATAGAATCCCTTCCACGAGCTATGCTGTTACTAAATTCTAAAGTTGCACCAAAAGGTCGACTACTTTGAAAGAAGTCGCTAGCATCCTGAACCTGGAAAATAATGATCAATGGTAAATTATAAATTTTTTTGATAGGATAGCTTAGAAAATTAGGTACATGATAACCAGC

Coding sequence (CDS)

ATGACCGAGACGTCCCCCACATTCTTCACCCCAAGTGAAAACCTCACCTTGCCTCGTTACAAGAGCAATGTGTCGGACACCGCAAGCAATCTGATGAACATCAAGAACAACATTCGTCTCCAATGGCTTGGGAATCCTCCACTTGAACAACTAGGAGTGCTTGATACACTGCTGCGGAAACCATCTCCACCACTTGTTCTTAGTTGCATATTTGCACGTTCCGAACCAACATCTGAACTTACCAGATGCAAAGGAGATTCACGAGAATTTAAATCAATAGAATCCCTTCCACGAGCTATGCTGTTACTAAATTCTAAAGTTGCACCAAAAGGTCGACTACTTTGA

Protein sequence

MTETSPTFFTPSENLTLPRYKSNVSDTASNLMNIKNNIRLQWLGNPPLEQLGVLDTLLRKPSPPLVLSCIFARSEPTSELTRCKGDSREFKSIESLPRAMLLLNSKVAPKGRLL
Homology
The following BLAST results are available for this feature:
BLAST of CcUC10G198900.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC10G198900.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC10G198900.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC10G198900.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CcUC10G198900CcUC10G198900gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC10G198900.1-exonCcUC10G198900.1-exon-CicolChr10:25731062..25731194exon
CcUC10G198900.1-exonCcUC10G198900.1-exon-CicolChr10:25731313..25731625exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC10G198900.1-cdsCcUC10G198900.1-cds-CicolChr10:25731062..25731194CDS
CcUC10G198900.1-cdsCcUC10G198900.1-cds-CicolChr10:25731313..25731524CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC10G198900.1-three_prime_utrCcUC10G198900.1-three_prime_utr-CicolChr10:25731525..25731625three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CcUC10G198900.1CcUC10G198900.1-proteinpolypeptide