CcUC10G187980.1 (mRNA) Watermelon (PI 537277) v1

Overview
NameCcUC10G187980.1
TypemRNA
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr10: 2089915 .. 2090876 (-)
Sequence length357
RNA-Seq ExpressionCcUC10G187980.1
SyntenyCcUC10G187980.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACATTCTCCAGGGAAGCTGCCACCACTTTTTGATTTTTTTGACCCAAATGCAGAGACTTTCCATATTCATGATGGAGTGGCCAGAGCTTTCCTACACGACAACCCAAAAACTAATGAAAAGATTAATATAGCAGCTAATAGGGGAAAAAGAGAAGGCAAATCGATTGTCATAGAGGAAGCAGGAGACATTTCACACGGGAAAGATACAGTTGAGAAAAGGTGGGCCTAGACAAATCATAAGAAAAAAAGGGTCTCTTTCACTTCTCCAAAGTCAACTACCGTATTTTACAAGCCACAGATAGCCCCTACTTATTCATTTGCTGAGGAAGGACCAAGTTATTAGGCCCAAATCAACCCCATAGATAAAATTGATACACAAGAACAGGCCCAAGAACCCAACTCGAAAATGCCCCAAGTTCAGATCACTGGGAAATCAGCTGAAAAGGAGGCAGAAAAAGATATTGGCCCAAAAATCCTAAAACGCGGTAGTAATCAAATTTCTCTGGAGTTCGATTCGCATTAATTAAGCTGTTGTTAATGCCACTCACTCATCAAGTGCAATCATAATCATGTGGGACTCCCTCACCCATGAAGTTGTTGAAGTTTTCAAGGGGAATTTCTCCTTATCTGTTCATATAGTTAAAATTGATGGATTAACCTGGTGGCTATCGGGCATTTATGGTCCTGCGAGCAGAAGAAATCGCATGGCTTTATGGAACGAGCTCACTAATGTAAGATCTTTATGTGGCAGTCATTGGATTCTTACGGGGGATTTCAATGTATATCGTTGGAGCTCTGAAACTACCTCTCCCCATCCATCTCAGATCTGAGAAGATTCAATTCTTCATAGCCAGTGCTGATCTAATTGAGCCCATACAAATTAATGGAACCTATGCCTGGTCCAATCTCCGATGCTCCCCTGTGCTAACAAAACTTGACAGATTCTTATACACTTAG

mRNA sequence

ATGGCACATTCTCCAGGGAAGCTGCCACCACTTTTTGATTTTTTTGACCCAAATGCAGAGACTTTCCATATTCATGATGGAGTGGCCAGAGCTTTCCTACACGACAACCCAAAAACTAATGAAAAGATTAATATAGCAGCTAATAGGGGAAAAAGAGAAGGCAAATCGATTGTCATAGAGGAAGCAGGAGACATTTCACACGGGAAAGATACAGTTGAGAAAAGATCTGAGAAGATTCAATTCTTCATAGCCAGTGCTGATCTAATTGAGCCCATACAAATTAATGGAACCTATGCCTGGTCCAATCTCCGATGCTCCCCTGTGCTAACAAAACTTGACAGATTCTTATACACTTAG

Coding sequence (CDS)

ATGGCACATTCTCCAGGGAAGCTGCCACCACTTTTTGATTTTTTTGACCCAAATGCAGAGACTTTCCATATTCATGATGGAGTGGCCAGAGCTTTCCTACACGACAACCCAAAAACTAATGAAAAGATTAATATAGCAGCTAATAGGGGAAAAAGAGAAGGCAAATCGATTGTCATAGAGGAAGCAGGAGACATTTCACACGGGAAAGATACAGTTGAGAAAAGATCTGAGAAGATTCAATTCTTCATAGCCAGTGCTGATCTAATTGAGCCCATACAAATTAATGGAACCTATGCCTGGTCCAATCTCCGATGCTCCCCTGTGCTAACAAAACTTGACAGATTCTTATACACTTAG

Protein sequence

MAHSPGKLPPLFDFFDPNAETFHIHDGVARAFLHDNPKTNEKINIAANRGKREGKSIVIEEAGDISHGKDTVEKRSEKIQFFIASADLIEPIQINGTYAWSNLRCSPVLTKLDRFLYT
Homology
The following BLAST results are available for this feature:
BLAST of CcUC10G187980.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC10G187980.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC10G187980.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC10G187980.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CcUC10G187980CcUC10G187980gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC10G187980.1-exonCcUC10G187980.1-exon-CicolChr10:2089915..2090047exon
CcUC10G187980.1-exonCcUC10G187980.1-exon-CicolChr10:2090653..2090876exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC10G187980.1-cdsCcUC10G187980.1-cds-CicolChr10:2089915..2090047CDS
CcUC10G187980.1-cdsCcUC10G187980.1-cds-CicolChr10:2090653..2090876CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CcUC10G187980.1CcUC10G187980.1-proteinpolypeptide