CcUC09G176830.1 (mRNA) Watermelon (PI 537277) v1

Overview
NameCcUC09G176830.1
TypemRNA
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr09: 19455038 .. 19455897 (-)
Sequence length297
RNA-Seq ExpressionCcUC09G176830.1
SyntenyCcUC09G176830.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAGGAAGGCAATCATTGAAAAGACTATTCCAGCACTGCTAGCCAAAGAGCAACGCAAATTCCACCCTAAAGGATTCTTCATTCGCCAAACAGAAGGAGCAAACCAGAGGGGCACAATGCAGCCAAATGGCATTTCCTTTGCAACATATCATGAGTATATTCGCCCATGCGCCACCAACCACAATAAATAAATAAAATAAAATAAAATGTTCACCTTCTTGAGAATTCTAACCGTCCAAATCAATCTAGTCAACGAATATCTAAGGTAAGGCCTATTTCCAGCAAGCTTTGGGTTGGAAGGTCATCCAAACCCAAAGCTGGTTCAACCAGGGTCTCTTTTTGGAACACGCTTTAGGTTGGGAGGTCATCCCTCCGAAAGGCTCCTTACGATATGAACAATTCACCACCTCCCTCAAAGGGCGTCCTTATTGGTTGAAAATCTCTACAGCCACTTGGGGAGGAGACCAAGAACTCTGTGCTTGAGAGACCCTGGTCCCAAACCACCCTGACAGAGAGGGAGATTTAACCTCCCACTACACTAAGTGGCTCCCAGCCCTTGTAATCTCCCCCATTCTAAAAGAAATCTCTAGCCGACTTCTGCATGCTTTTAATTACGCCAGCCAGCAGTTTAAGAAAGGAAAAATAATAAAGGGGCAGCCATTAAGAAACGAGGAATTTCTCATCTCAATCCTCTTGAAGCAATGACTTTTCCTTTAGGCTTCCCTCGCTCCCCTCGTTTAGATCTCAAATGATTGATCAACCAAGAAAAGAGATTCAGTCTCCCAACATTATGAAGTACCAGAGGGCAGTTAAGAAACTAGTAGAGCAAATCAAAGTAACTACAGTAGAATGGTAA

mRNA sequence

ATGTCAAGGAAGGCAATCATTGAAAAGACTATTCCAGCACTGCTAGCCAAAGAGCAACGCAAATTCCACCCTAAAGGATTCTTCATTCGCCAAACAGAAGGAGCAAACCAGAGGGGCACAATGCAGCCAAATGGCATTTCCTTTGCAACATATCATGAGCTTCCCTCGCTCCCCTCGTTTAGATCTCAAATGATTGATCAACCAAGAAAAGAGATTCAGTCTCCCAACATTATGAAGTACCAGAGGGCAGTTAAGAAACTAGTAGAGCAAATCAAAGTAACTACAGTAGAATGGTAA

Coding sequence (CDS)

ATGTCAAGGAAGGCAATCATTGAAAAGACTATTCCAGCACTGCTAGCCAAAGAGCAACGCAAATTCCACCCTAAAGGATTCTTCATTCGCCAAACAGAAGGAGCAAACCAGAGGGGCACAATGCAGCCAAATGGCATTTCCTTTGCAACATATCATGAGCTTCCCTCGCTCCCCTCGTTTAGATCTCAAATGATTGATCAACCAAGAAAAGAGATTCAGTCTCCCAACATTATGAAGTACCAGAGGGCAGTTAAGAAACTAGTAGAGCAAATCAAAGTAACTACAGTAGAATGGTAA

Protein sequence

MSRKAIIEKTIPALLAKEQRKFHPKGFFIRQTEGANQRGTMQPNGISFATYHELPSLPSFRSQMIDQPRKEIQSPNIMKYQRAVKKLVEQIKVTTVEW
Homology
The following BLAST results are available for this feature:
BLAST of CcUC09G176830.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC09G176830.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC09G176830.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC09G176830.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CcUC09G176830CcUC09G176830gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC09G176830.1-exonCcUC09G176830.1-exon-CicolChr09:19455038..19455176exon
CcUC09G176830.1-exonCcUC09G176830.1-exon-CicolChr09:19455740..19455897exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC09G176830.1-cdsCcUC09G176830.1-cds-CicolChr09:19455038..19455176CDS
CcUC09G176830.1-cdsCcUC09G176830.1-cds-CicolChr09:19455740..19455897CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CcUC09G176830.1CcUC09G176830.1-proteinpolypeptide