CcUC09G165400.1 (mRNA) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAACAAAAAAAATCATAAAAATCTTTTACTTTTCCTTTCTGTTGCAGCCCCGCGGCCTTCTTGTCACCTCCGTCGCCGATAGGCTTACAGATAACAAATGGCCGATAGGTTTTCTCTTGTTCTGCCTTTTGCTCTCTTTTTGTTGCTTCAATACTCCGCCGCTCAGACCGTTCATACCGTCGGTGACTCCGCCGGCTGGAGGATCCCTCCAAACGGCGCCGCTTTCTATGGCAACTGGGCTACTGGAAAAACTTTCCGCGTCGGTGATTCTCTCGGTGAGTAATTAAGTCCTCCTTTGAATGCTCTGTTTCTCTGAACTTCTCTCTTACTCTTTTTTTCTTGGTTATAGTTTTCAATTTCGCGACTGGTTTGGATGAATTGACGAGAGTTTCGAAGAGGTCGTTTGATTTGTGCAGTGACGACGATGAAATTGGAGATTCCATTGAAACAGGGCCTGCAACCATTCTGTTATCATCTCCAGGTGAGTATTATTTCATCAGCTCTGAGGATAGGCACTGCCAGCAAGGTCAAAAGTTAGCCATCAATGTCATCGCCGCCCCTGGAGCTCCGACGCCGCCGTCTTCCAACGCTCCTCCACCAACCCCAGGACGAGCTCCAGTGACCCATGTCGTCGGAGACGCCGCTGGGTGGGCGGTTCCTCAAGGCGGTGCGATCTTCTATGTCAACTGGGTTGGCAGAAAAACCTTCGTTCTGGGCGATTCTCTATGTAAGGATAATCTATTCAATGTGGTAAGAAATTTGAAATTTGAAATATGGAAATTTGAAAATTGTCAGTGATTCTGTTTTTGCAGTGTTCAATTTTACAACCAACGATGATATAGTTAGAGTATCGAAAACGTCGTCCGATTTATGTAGCGATGACGACGAGATCAGCGACGACATCGATAATGGACCGGCTATCCTAATGTCAACTCCCGGCGAGTATTATCAGTGGCAGATACAGAGGTGCAAATCAATGGAGCACAAATGTATATATAGATTTAAAAGTTTGAACATAAACTTTTAAATGGTTGTTAGCATGTAGTTTTGAAAATGTTTAATAAGTCTTTGAAATTTTATATTTTTTATTTAATAGATTCACAAAATATCGATATTAAATATTAAATAAACATAAATTTTAACATTTTACTTCATAGGCACACATCTTTTTAAATTAATTTATCTATCAAGTATAAAGTTTAAACTTAAAATTTTATAAACACAAACTAGTTCTTTTCTCTAGTAAAACAGTTAATTTGAAATGCGAGAAAATTCCAGATTTTTGGACATGTTTTAAGTGTATTAGAAATTAAAATATTATGTATGTATATATATATATTTAAAAGAAAAGTGAGCCTCTTATGAATTGAACCTCAACTTGATGTTAAAAACTTAAAACAAACTCCCAAGACACCTTTGAAGCAGAGTTTTATTAATAAAATATATTTAATATAAATATAAAATTTTAATATTTAATAAAAATAATATACAAATATGTAAGATGCGAAGGAATGTCCCTAGCCATTCATAGATCCACTCCTGAGTATTACTTGATAAGCAATGGAGATAGGCAGTACCAGGAAGGTCAGGGGAATTAGCAATCAATGTCTGTACCGTAGCTGGACCAATGGCCCTCACTTCATCAAATCCTCCACCTTCCAACACTCGTCTGCCACCTCCACGCCTTGCCCCTATTTCAACTCCCCAACCTCTGGTTCGACTGCTGGTGTGGTTCACCATCTACACCTAGTGGCATCGAACCACTGTACTCCTCTGCCAACATTGTTGCCGCTGCTCTCTCCGCCACAGTTTTTGGCCTTGTTCTAAGCTTCTTCTAG AAAAAACAAAAAAAATCATAAAAATCTTTTACTTTTCCTTTCTGTTGCAGCCCCGCGGCCTTCTTGTCACCTCCGTCGCCGATAGGCTTACAGATAACAAATGGCCGATAGGTTTTCTCTTGTTCTGCCTTTTGCTCTCTTTTTGTTGCTTCAATACTCCGCCGCTCAGACCGTTCATACCGTCGGTGACTCCGCCGGCTGGAGGATCCCTCCAAACGGCGCCGCTTTCTATGGCAACTGGGCTACTGGAAAAACTTTCCGCGTCGGTGATTCTCTCGTTTTCAATTTCGCGACTGGTTTGGATGAATTGACGAGAGTTTCGAAGAGGTCGTTTGATTTGTGCAGTGACGACGATGAAATTGGAGATTCCATTGAAACAGGGCCTGCAACCATTCTGTTATCATCTCCAGGTGAGTATTATTTCATCAGCTCTGAGGATAGGCACTGCCAGCAAGGTCAAAAGTTAGCCATCAATGTCATCGCCGCCCCTGGAGCTCCGACGCCGCCGTCTTCCAACGCTCCTCCACCAACCCCAGGACGAGCTCCAGTGACCCATGTCGTCGGAGACGCCGCTGGGTGGGCGGTTCCTCAAGGCGGTGCGATCTTCTATGTCAACTGGGTTGGCAGAAAAACCTTCGTTCTGGGCGATTCTCTATGTAAGGATAATCTATTCAATGTGCTGGACCAATGGCCCTCACTTCATCAAATCCTCCACCTTCCAACACTCGTCTGCCACCTCCACGCCTTGCCCCTATTTCAACTCCCCAACCTCTGGTTCGACTGCTGGTGTGGTTCACCATCTACACCTAGTGGCATCGAACCACTGTACTCCTCTGCCAACATTGTTGCCGCTGCTCTCTCCGCCACAGTTTTTGGCCTTGTTCTAAGCTTCTTCTAG ATGGCCGATAGGTTTTCTCTTGTTCTGCCTTTTGCTCTCTTTTTGTTGCTTCAATACTCCGCCGCTCAGACCGTTCATACCGTCGGTGACTCCGCCGGCTGGAGGATCCCTCCAAACGGCGCCGCTTTCTATGGCAACTGGGCTACTGGAAAAACTTTCCGCGTCGGTGATTCTCTCGTTTTCAATTTCGCGACTGGTTTGGATGAATTGACGAGAGTTTCGAAGAGGTCGTTTGATTTGTGCAGTGACGACGATGAAATTGGAGATTCCATTGAAACAGGGCCTGCAACCATTCTGTTATCATCTCCAGGTGAGTATTATTTCATCAGCTCTGAGGATAGGCACTGCCAGCAAGGTCAAAAGTTAGCCATCAATGTCATCGCCGCCCCTGGAGCTCCGACGCCGCCGTCTTCCAACGCTCCTCCACCAACCCCAGGACGAGCTCCAGTGACCCATGTCGTCGGAGACGCCGCTGGGTGGGCGGTTCCTCAAGGCGGTGCGATCTTCTATGTCAACTGGGTTGGCAGAAAAACCTTCGTTCTGGGCGATTCTCTATGTAAGGATAATCTATTCAATGTGCTGGACCAATGGCCCTCACTTCATCAAATCCTCCACCTTCCAACACTCGTCTGCCACCTCCACGCCTTGCCCCTATTTCAACTCCCCAACCTCTGGTTCGACTGCTGGTGTGGTTCACCATCTACACCTAGTGGCATCGAACCACTGTACTCCTCTGCCAACATTGTTGCCGCTGCTCTCTCCGCCACAGTTTTTGGCCTTGTTCTAAGCTTCTTCTAG MADRFSLVLPFALFLLLQYSAAQTVHTVGDSAGWRIPPNGAAFYGNWATGKTFRVGDSLVFNFATGLDELTRVSKRSFDLCSDDDEIGDSIETGPATILLSSPGEYYFISSEDRHCQQGQKLAINVIAAPGAPTPPSSNAPPPTPGRAPVTHVVGDAAGWAVPQGGAIFYVNWVGRKTFVLGDSLCKDNLFNVLDQWPSLHQILHLPTLVCHLHALPLFQLPNLWFDCWCGSPSTPSGIEPLYSSANIVAAALSATVFGLVLSFF Homology
BLAST of CcUC09G165400.1 vs. NCBI nr
Match: XP_038899883.1 (blue copper protein-like [Benincasa hispida]) HSP 1 Score: 334.3 bits (856), Expect = 9.3e-88 Identity = 166/192 (86.46%), Postives = 173/192 (90.10%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. NCBI nr
Match: XP_038899883.1 (blue copper protein-like [Benincasa hispida]) HSP 1 Score: 48.1 bits (113), Expect = 1.3e-01 Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0
HSP 2 Score: 292.4 bits (747), Expect = 4.1e-75 Identity = 140/187 (74.87%), Postives = 158/187 (84.49%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. NCBI nr
Match: XP_004135850.1 (early nodulin-like protein 2 [Cucumis sativus] >KGN45270.1 hypothetical protein Csa_016128 [Cucumis sativus]) HSP 1 Score: 278.5 bits (711), Expect = 6.1e-71 Identity = 135/187 (72.19%), Postives = 150/187 (80.21%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. NCBI nr
Match: KAA0058752.1 (mucin-5AC [Cucumis melo var. makuwa] >TYK10546.1 mucin-5AC [Cucumis melo var. makuwa]) HSP 1 Score: 277.3 bits (708), Expect = 1.4e-70 Identity = 136/187 (72.73%), Postives = 154/187 (82.35%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. NCBI nr
Match: XP_023513444.1 (uncharacterized protein LOC111778056 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 276.9 bits (707), Expect = 1.8e-70 Identity = 141/195 (72.31%), Postives = 156/195 (80.00%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. ExPASy Swiss-Prot
Match: P29602 (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3) HSP 1 Score: 104.4 bits (259), Expect = 2.1e-21 Identity = 57/128 (44.53%), Postives = 73/128 (57.03%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. ExPASy Swiss-Prot
Match: Q07488 (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2) HSP 1 Score: 94.4 bits (233), Expect = 2.1e-18 Identity = 62/164 (37.80%), Postives = 85/164 (51.83%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. ExPASy Swiss-Prot
Match: P42849 (Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 6.2e-18 Identity = 47/107 (43.93%), Postives = 67/107 (62.62%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. ExPASy Swiss-Prot
Match: P00302 (Stellacyanin OS=Toxicodendron vernicifluum OX=4013 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 9.9e-16 Identity = 43/104 (41.35%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.2e-15 Identity = 56/148 (37.84%), Postives = 78/148 (52.70%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. ExPASy TrEMBL
Match: A0A1S3CDI6 (uncharacterized protein LOC103499800 OS=Cucumis melo OX=3656 GN=LOC103499800 PE=4 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 2.0e-75 Identity = 140/187 (74.87%), Postives = 158/187 (84.49%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. ExPASy TrEMBL
Match: A0A0A0K6B8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432520 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 2.9e-71 Identity = 135/187 (72.19%), Postives = 150/187 (80.21%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. ExPASy TrEMBL
Match: A0A5D3CJG7 (Mucin-5AC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001990 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 6.5e-71 Identity = 136/187 (72.73%), Postives = 154/187 (82.35%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. ExPASy TrEMBL
Match: A0A6J1KVF8 (uncharacterized protein LOC111497949 OS=Cucurbita maxima OX=3661 GN=LOC111497949 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 5.5e-70 Identity = 142/195 (72.82%), Postives = 153/195 (78.46%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. ExPASy TrEMBL
Match: A0A6J1H8Q4 (uncharacterized protein LOC111461118 OS=Cucurbita moschata OX=3662 GN=LOC111461118 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 7.2e-70 Identity = 140/195 (71.79%), Postives = 155/195 (79.49%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. TAIR 10
Match: AT5G20230.1 (blue-copper-binding protein ) HSP 1 Score: 94.4 bits (233), Expect = 1.5e-19 Identity = 62/164 (37.80%), Postives = 85/164 (51.83%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. TAIR 10
Match: AT1G45063.1 (copper ion binding;electron carriers ) HSP 1 Score: 93.6 bits (231), Expect = 2.6e-19 Identity = 65/186 (34.95%), Postives = 92/186 (49.46%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. TAIR 10
Match: AT1G45063.2 (copper ion binding;electron carriers ) HSP 1 Score: 93.6 bits (231), Expect = 2.6e-19 Identity = 65/186 (34.95%), Postives = 92/186 (49.46%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. TAIR 10
Match: AT2G32300.1 (uclacyanin 1 ) HSP 1 Score: 87.4 bits (215), Expect = 1.8e-17 Identity = 55/151 (36.42%), Postives = 77/151 (50.99%), Query Frame = 0
BLAST of CcUC09G165400.1 vs. TAIR 10
Match: AT2G31050.1 (Cupredoxin superfamily protein ) HSP 1 Score: 85.9 bits (211), Expect = 5.4e-17 Identity = 59/158 (37.34%), Postives = 83/158 (52.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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