CcUC08G152830.1 (mRNA) Watermelon (PI 537277) v1

Overview
NameCcUC08G152830.1
TypemRNA
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr08: 21205889 .. 21207838 (-)
Sequence length183
RNA-Seq ExpressionCcUC08G152830.1
SyntenyCcUC08G152830.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGTATGTATGTCTATGTACGTTTCATATATGGAATAAGATTCTAAATATCATCCATGTAATGTTTGTCAATGTCACGTTATATACAAATATATATAACAACTTAGAGACACCCAATATTTCTTCTTCTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTTCTTTTTTCGTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTGACAATGTAGGGTGAGGAAATCGAATTTCAAACCTCAAAGTAAAACAATTTAGACCTTAGATAGTGTCAGTTGATTTTTTGCAAACAATAATTGATTACCTCAAGGATAACAGTTATATCAAAATGTGCGCCCTTTTCTTACCGAATTTAATTTTTGGTATATAATGACAATTTAAAATTGTCATTAAAAGAAACCTTTAATGTTAGTTGAGAAGGGTCATCTTATCCATATGTCAATAAGTGCACAAGGACTATCTGTCGTCATAGACTATTTCATTAAAACAAAAATCGTTTCAACCTTTTTGCATTTGTTTTCTTTACAGTGCCCTCGATGCAAATAATTCATTATTGAAATAATATTAAGGTAAAAAAGTATTGTGACGTTTCACCAATATCGTTATTTACATTTGTGTGTTGACGGTTGATCAGTATTATAAACAAATGAATAATGACAATTTTTCATGTACCCCATAGGAAATGGTAATTTTCTTGATATATGTGCGAATATAATGAAAGGCTAAATTTTTTGTTTAGGAATGTACTTATGACAATTTTAAGAAAGTAATCGTGAAATGATGAAATAATGATAGTAGTGAGAGTTGACATTTCAATCTTTCATGGAAAAATGGCTATTAAACAAAGCGAAAACAGTTGATTAAATCATCAAAATCATTGGTCACATCGAAGAATGAAAGCTAGCTGCAGCCAAGAAACAAACTACTAATTTGGACACAAAATTACATTACTTAAGACAGAGTTGGAGCATCTGCTTTTGTTAAAAGACAAACATAAACTCTGTGTTTGAATGACATTGCAATCATCGGAATCATAAAAAAGAAGACAAACTAAGCTTAAAAACAACCTAATAATTATGAACTCACATGAGCCAATAACCTATATAAACTCCCAAAAAGTTTCCACTTTTTCCCTATGGAACACATAATTCAAAGCTGAGGGAACACAACATTGAATTTATAATATGGACTTTACAGTTCTAAATTCAGGGTTGTGCTCTCTCAAATGTGATTCCATGGCCGTCAAGGGCATCAAGAGACGGCGGAGAACTGCTTCTTCTTCCCCCACAGTTGGTGGTGGAGATGCCCAACCACACAAGTCAATGGCAGATCATTCCACTGCCACAAAAAGAAGCTCCAGGTTTCGTGGAGTTAGCAGGTATTTAGATGCCCTCCATAAAAAAATAAAGATTCTCATGTGCCCATTCTTTTTTTAAACAAAAGGGAAGTATGAGATTAGACGTAGCCTAGGTTACACCTAATGCATGCCTCATTCACAAATACTTAAAGAAAAAGCAAATGATATTTTTTAATTTTCTTGTTCTATTAGAAAGTTTTGATTTATTTTTCATGTATATAGCTTCTATTTAGGTCATTAA

mRNA sequence

ATGCATGGTTGTGCTCTCTCAAATGTGATTCCATGGCCGTCAAGGGCATCAAGAGACGGCGGAGAACTGCTTCTTCTTCCCCCACAGTTGGTGGTGGAGATGCCCAACCACACAAGTCAATGGCAGATCATTCCACTGCCACAAAAAGAAGCTCCAGGTTTCGTGGAGTTAGCAGGTCATTAA

Coding sequence (CDS)

ATGCATGGTTGTGCTCTCTCAAATGTGATTCCATGGCCGTCAAGGGCATCAAGAGACGGCGGAGAACTGCTTCTTCTTCCCCCACAGTTGGTGGTGGAGATGCCCAACCACACAAGTCAATGGCAGATCATTCCACTGCCACAAAAAGAAGCTCCAGGTTTCGTGGAGTTAGCAGGTCATTAA

Protein sequence

MHGCALSNVIPWPSRASRDGGELLLLPPQLVVEMPNHTSQWQIIPLPQKEAPGFVELAGH
Homology
The following BLAST results are available for this feature:
BLAST of CcUC08G152830.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC08G152830.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC08G152830.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC08G152830.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CcUC08G152830CcUC08G152830gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC08G152830.1-exonCcUC08G152830.1-exon-CicolChr08:21205889..21205896exon
CcUC08G152830.1-exonCcUC08G152830.1-exon-CicolChr08:21206109..21206277exon
CcUC08G152830.1-exonCcUC08G152830.1-exon-CicolChr08:21207833..21207838exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC08G152830.1-cdsCcUC08G152830.1-cds-CicolChr08:21205889..21205896CDS
CcUC08G152830.1-cdsCcUC08G152830.1-cds-CicolChr08:21206109..21206277CDS
CcUC08G152830.1-cdsCcUC08G152830.1-cds-CicolChr08:21207833..21207838CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CcUC08G152830.1CcUC08G152830.1-proteinpolypeptide