CcUC08G147000.1 (mRNA) Watermelon (PI 537277) v1

Overview
NameCcUC08G147000.1
TypemRNA
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr08: 4782213 .. 4788096 (+)
Sequence length273
RNA-Seq ExpressionCcUC08G147000.1
SyntenyCcUC08G147000.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAAGTGTTTAGTCTATACAACATAATTTTGTAATTGCATATTGTTTTAGCACTCAACTTCTTATAGAAAAAACTTGGACTGAACATACGCTTTTCATGTTTTGAATTTTCAAATGAAGAGACATTTGTTGCTCACATATTCCTTTGGTTTATTAATTAAACATGCCAAACAATCTCGTAAATTGCTATAAATTTTGAGGAAATTTCTAGTACTACAGTACTATGGAAAATTTTCTATATTACCTCCATTTAGTACTTACCACATTAGGAGTTTTTATGAATTATGTGAGGTCCACATATTAAATATTTAATAAATTAATAAATTATTTAGTGACGTGACAAATACTTAATAGAGGTAATATGTACTACCGCACACTAAAAGTTTTTCAAAAAATCTCTGAGTGACATGGATACCAACCAAATATTTTTGGGTCTATTTTATAGCCCATTGATGTTTTTTCTTTCCGTTTTTTCATTTTTAAAGGTTGAGACTTTGGTTTCCAATTGATTTTCTTTTTTTCTTTTTCTTTTTTGGGTTAAAATTCAATCAACAGTTTTGAAGAATTCAAGGATTTTTGAAAGGAAAAAAAAAAAAACAAAAAAAAAGGGGGTTTAAAACCGGTTTTCAAGTGGCCTAATTAACTATCATAAATATGCAGTGCTTAGCAAATGGGAAATTTGTACGAATTGCCCAAATTCAAGGACCCAAATGAAATTCCAATTTTCAATGAAATATGGCTTTCAGCTAGCGTCAACAACGTGTAAATTTACTACACTACCCCCAAAAACGTTATTCAGGGTTTAACGATTAACATAGTCAAGCTAATTCAGGATGTTTAATAATTACAACAACTGCACTTGACTCTCTCAACCCTCACTATATGTACAACATTTACTTAAGTTCAATATTTACAATTTTTCAAGTTACTAGACTCTAAAGACGGGCCCAGACGAGTATCTTCTGTAGGCTAAGCACCTCGGACACGCTCGCTACCTGGAATATAGAGAAACATGGAAAGCATGAGCTAAACGACCAATGAGTGACTAGCTAAGAGTCCTCCTTTAAGCCATGTAAGCTACAACACAGAATCCAGCTATAACAACAATATCATGTGTAATTCATAGCTTAAACATACATTTGCATTCGAGTAAAAGACATACATAAACTGGTTTACCTAAAACCTTTCCTTAGTTGAGGAGGAGCGAGGCTCAACACCACTCAACGTCGAAATAACTTTAGCTGTGTGGAGTAATCTCAACACATCAACATAACTACACATACACATATCCAGGGTCTCCCAAGGACCTTCTTCGAGTCCTTCAGTACTAGTCCCTTAATACATTTTCGGCCTCCCACATGCCTTCTCCTAGTTCTTCAGCATTTGGACCATTTCCATACATAATTCACCCATATGCCTTCTCCGAGTCCTTCAACATAGGGAATCATTTTCATACATATTTTACCCAAATGCCTTCTCCAGTCCTTCAGCATTGGGAGTCATATTCATACATAATTTTTTCGCATGCCTTCTTCGAGTCCTTCAGCACTGGGAGTCATTTAAATAAAACTATAACATAGCATAAATAGTACATTTGAAACATTTCATTCATCACTTCATCAATCACATGTTTACATGCTTTCGTTTACTCACATAATTATAAATTCCATACTTAGCTAATTTAACAGCCACGTAGGCCTTTCACAAAATTCGTAGCTCAATCAGTATATATATATCTCATACTTTTCAACACATAACACACGTCATACTTGTAACACAAATGGAGATGTTTCACATAATCAAGTTTCAAACATATATCCAATCAAGAAACTATGCTTGAATTAAACATTTAGAAATCAAGTGTCACTCACAACTTGTCCTAGGCCTTGAGCGGATTATACACCTTCCCTAGCTCCTCTCGACCTCAAATAACACATTTCTCGTGTTAGACTTCCCTAAAGTTTCTTTTTACAAACCATTAGTTTATGCATTTTTATTTTATTCATGTTTCACCACTGAGACCAACTTCTTCCAAAAACAATCATAATAAGCGAGATCCACAATATAGCGAGATTACTAGCAAGATTCCACACTACTAGCAAGATTAAACTACAGGCACACGGTACTAGCGATACCATGGTGAGCGAGACTAGCAAGACTTACTTGAGCAGCGATAACCAGCAAGAGTTGTGAGACGTAAAGCCTTCAGTGTTACCAACGACACTCGTCTCGCTACTCACGCTTAAATTCCTAGCGTTACCGTAGTTCCAGCGACACCTGCTATCTTAGTTTTTGCCTTTCCTCTTATTCTCACTTCTACCTGTTAAAAGTCGCATTTCTAGCCAAATTTAAAACTTCTTTCCTTCTATAAACTTGTAGAGAAATATGTTTTCTAGCTTACCTTAAATTTTTTAGGCTTAACTTCTCTTCGTTCCTCGGATATTTCAAGATTACCTTGCGCTACTTCAGATCACACAACAACTCTATATCAGTCACTTCCACCTAAAGGTTTACATATTTCTCTTCCAATTAAGCTCAAACATTCTTCATAAAAGTTGTTAAGAATTGAGTTAACTTACTGACCTTAAAGTTTCAGCCCTAAATTCGATCTCTTCAATACGTTCTTCTCCAAACACCAGACCATGCTGGGATTTCGCGACAACAGCCAAACTCACTGTTCCAGCTTTAGTTTTACCACGAAAACGATCTGAATTCTCCACAACTTTGCCCTAAACACCTTATTCTACCTCTCTTCGTCTCTCAGCTGTGAAATTCAACTGATTTGAGCTTTTGAATGTGTTTAAAATGATCAAACACTCAGCTTACTCACTTAAATAGGCCGCCGACTTAACCTCCACTTTCTTTTCCTTTAAAAGTGAATTGGCTAACGCGTACTTCAGCTCACTAATGCATAGCAGTCTTCACAAACGCATGGCACACCATCACCAATGCATAGCAGCCTTCACAAACGCATAGGACACCTTCAACGCATGATAACTCATGCCTTAAGGCTCTCGGCCGCTCTTTACTTACCTTCTTTAGCTTGTCATCTTCCAAAACCAATCTTTATAGCTTGCTAACTTCCAAAGCTAAGTGTGGGGCTTACAAGTAATCCGTGGACTTCAAAAATTTTCCCTTCTTTTTAACATTGTATTATCACAAAATCATTGGGCATGAGCTAGGCATGATCACGAGAGAGTAGTAGGATAGTGACACGAAATATAGATAAAGAATGTGCGAGAGATGAGAGTACACGAAGTGAGGGTCAAGAGTAGGACACATGGTGCCGAAGAAGGAATGAGTACTAGAGTCGAGGCTCAAGAGTCGAGGATCGAGGGGCAAGGATCGAGAGTCAAGAGAGAGAAAGGTTAGTTGTAGTATTTCGTAATGAGAATCAAGAAACATAGCGAGAAGGGAGAATGTAATGATAAACGAGTATCTAAATATACAGCGAGAAGTGAGATTCAGATTAGAGGAGCGAGAGCGTGAGTTCATAGCAGGAATCGAGAGTCGTTAGCGAGATTTTGACAGAAAACAAAATTTTGTAATTGGCTTTTCTTGTTTACTATTTAGAAGGATGGATGGGAAGCAATTGTTTATTTGACATGGTGGGACGTGGGATGACAACAAACAGAGTTATGACGGACGCGTTTTAAAGGGCATCATGGTGCCAATCACATTGACATACCAAGAACTGAAGGACCAAGTATACAGAATAGCAAGGGTTGATTCATTAGAATTCAACATTGTATGCCTAAATGACGACGACAACATTAGATTTTTGTGAGTAGAGGCTGACCAGAATAGACCTCAAACTTTTGTCAGTGTTGAGAGCAACCATTAGACAGAACATCAGGCTGAACCGTGGATAGAACAACACACTATTGGTGAGTCTGACATTTTTTCCTTCCGTGGTTTCCATGGGAAATGACGACACTAATCCATGGGATGAGAAAGGTGTTTCACAACATCATTCTTGCAAAAAGAGGGTTCGTAACACTAAAGTGGATGCACTCACAAAATATGATATGAATTTGAATGGTGGTGAATGGGATGAGAATTGTTGTGAGGATGTTGGGTGTGATCCTCCTATAAATGAGTTTATGCCTACTATAGTATTTAATATGCATCCAACACCACATGTGCATCCTGTCTTCAATGCACCGCTGGAAACTCCAATTTTGCATAACGAGTTCAGCCATCTTCTTGGAAATGTGCCTAGGATGTTATACATCTGTTGGGTGTGTGGTACTTCAGGAATTGGACCATCTGTCATGCAGCCACATTCCTCGTCTGGTATGAACATGGAGGTTAGGCAAATCTTCTTCTCGAAGGATGATGTGAAGATAAGGTTGTCCATGCTAACTATCAAAGAAAATTTTGAGATGCGGGTCCGAAAGTCAATAAAAAATTGTACAATGTGAGGTGTATCCACGAGACATGTAAGTGAGCAGTACAGGCGGTGAAGATGGAAGGATGTGACATCTTCAAGATTACAAAATATATTATTGTATACACATGCTCCATTGAAGCTTTAAACCACGACCAATCTCAAGCTAGTGCATCTGTAGTTGCTCAATTGATAAAGAAACAAGTTTGTTGTGAGTTGTGCTAAAAACCTCGTAACATAATTGAGGATATACGACAAGAGTATGGAGTTAATGTAAGCTACGAAGGGGAGTCTTGAGGAATCGTACGCTCTTTTGCATGCCTACGATGAAGCCTTAAATATTGAAACCCCGATACGTATTTCAAGATTGAACTTGAGGGTGGCCAATACTTTAAGTACTTATTCATGGCGTTAGGGCCTCACATACGAGGGTTTAAGAATATTCATCCAGTTATTATTGTAAGTGGTGCTTACCTTATAAATACCAGGGCACGATGTTGGTGGCTATTGCCATGGACTGTAATAATCAGCTGTACCCACTTACATATGTTATTGTTGACACTGAGACTAACGCATCATGGGCATGGTTCATGACAAACCTAAAAAGGGCAATTGGAGAATGTCCTGATTGTGCTTCGTTTCAAATCATCATCAGACCATAACGCATGTAATTGGTGCTATCTTCCTGAATATGTTCCATGATCGTATATTTACTACTTACAGAAGAACATTGAAAAGGATTTCAAGGACCCAGCAGTGACCAAGTTGTTTGATAATGCTGCTAAAGCATACAGACAATTTGAGTTCAAAGCTTTGTGAGACCAGCTAATGAGAGTAAAAAACGGTAGCTTTCGGAGATATTTGGAAGACATCAGTCTTGAACGATGGAGTTAGGCATACTAGCATGGGAACCAATATGACAACATGACTAGTAACACAGCTGAGTGCTTCAACTCACTGATAGTGGACGTAAGGAAGTTGCCAATAGTCTCTTTCCTCGAAATACATACTAGACCTGTGTCAAAATTGATTCTATAAAAGGTGAAATAATGATCAGTTAGTATGTCCACACATTTGAAATATGAGTATGTCAAAGCGAGATGGTATACGGTAAATCCACTTGACTGTTGCCAGTTCCATGTGAAGGATGGTGGGTTAGACGACATAGTTAGGCTGAGCATGAACGAGTGCAGCTGAATGAAGTTTGAGAATTTATAGATCCCATGTTTTGCATGCCATTGCTGCAGCTAAGGAGAGGAACATCAACCCCTTCACACTTTGTAGTCGGTTTTATAGTGTTGAGTCGCTCGTACTTGCATATGCAGTGTCTATATCACCAATTGTCCACGTGTTGGAATGGAAGAAACCCCCAGATTCTGTTGAGTTAAGGATCCTTTCTCTGATGAGGGTTGTAGTGTAGGTCGCCGACGAGTACAAAGAATTCCATCAGCCAATGTTGAGTCAAGAAATGCAATCGATGTGGTGGAACTAG

mRNA sequence

ATGCGAATATTTAATATGCATCCAACACCACATGTGCATCCTGTCTTCAATGCACCGCTGGAAACTCCAATTTTGCATAACGAGTTCAGCCATCTTCTTGGAAATGTGCCTAGGATGTTATACATCTGTTGGGTGTGTGGTACTTCAGGAATTGGACCATCTGTCATGCAGCCACATTCCTCGTCTGGTATGAACATGGAGGTCGCCGACGAGTACAAAGAATTCCATCAGCCAATGTTGAGTCAAGAAATGCAATCGATGTGGTGGAACTAG

Coding sequence (CDS)

ATGCGAATATTTAATATGCATCCAACACCACATGTGCATCCTGTCTTCAATGCACCGCTGGAAACTCCAATTTTGCATAACGAGTTCAGCCATCTTCTTGGAAATGTGCCTAGGATGTTATACATCTGTTGGGTGTGTGGTACTTCAGGAATTGGACCATCTGTCATGCAGCCACATTCCTCGTCTGGTATGAACATGGAGGTCGCCGACGAGTACAAAGAATTCCATCAGCCAATGTTGAGTCAAGAAATGCAATCGATGTGGTGGAACTAG

Protein sequence

MRIFNMHPTPHVHPVFNAPLETPILHNEFSHLLGNVPRMLYICWVCGTSGIGPSVMQPHSSSGMNMEVADEYKEFHQPMLSQEMQSMWWN
Homology
The following BLAST results are available for this feature:
BLAST of CcUC08G147000.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC08G147000.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC08G147000.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC08G147000.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CcUC08G147000CcUC08G147000gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC08G147000.1-exonCcUC08G147000.1-exon-CicolChr08:4782213..4782219exon
CcUC08G147000.1-exonCcUC08G147000.1-exon-CicolChr08:4786331..4786524exon
CcUC08G147000.1-exonCcUC08G147000.1-exon-CicolChr08:4788025..4788096exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC08G147000.1-cdsCcUC08G147000.1-cds-CicolChr08:4782213..4782219CDS
CcUC08G147000.1-cdsCcUC08G147000.1-cds-CicolChr08:4786331..4786524CDS
CcUC08G147000.1-cdsCcUC08G147000.1-cds-CicolChr08:4788025..4788096CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CcUC08G147000.1CcUC08G147000.1-proteinpolypeptide