CcUC07G139580.1 (mRNA) Watermelon (PI 537277) v1

Overview
NameCcUC07G139580.1
TypemRNA
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr07: 25759410 .. 25759836 (-)
Sequence length264
RNA-Seq ExpressionCcUC07G139580.1
SyntenyCcUC07G139580.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAATTTAACATGCCGGTTATGAAAATAGAAGCCCATTTACAGGGATTTTGAAGCTTGAACTATTTTTCATCCGTGCCTTAGAAAAGTGTCGTCCGTACAATTTCCCCCTAAAATTTCTACCCCATTCCAATTATCAAAGGAAAACGACTGCTGTGTTTGCAGCTTTAGTCTGCACTGCATCTTCTTCGACTCCGGCGACGAACCCACTCGACGGCAGTCTTCTTCTTCCGCTAGTGAATTGCAGTGTTAGAACGGCAACGGCGCGCAACCTTCACTCTCGAATGATCTTCTTTCCCGACGTGAGAGCGGCGCGGAACACCCACGAACAGCGGCGATCTACTCCACCACGAGGGCCACACGCCGATCTGCGACGGCAGCGGGAACTCTCCTGGGTATCGGCGACGCGTTTCTTGGTTCATTAA

mRNA sequence

ATGACTTTAGTCTGCACTGCATCTTCTTCGACTCCGGCGACGAACCCACTCGACGGCAGTCTTCTTCTTCCGCTAGTGAATTGCAGTGTTAGAACGGCAACGGCGCGCAACCTTCACTCTCGAATGATCTTCTTTCCCGACGTGAGAGCGGCGCGGAACACCCACGAACAGCGGCGATCTACTCCACCACGAGGGCCACACGCCGATCTGCGACGGCAGCGGGAACTCTCCTGGGTATCGGCGACGCGTTTCTTGGTTCATTAA

Coding sequence (CDS)

ATGACTTTAGTCTGCACTGCATCTTCTTCGACTCCGGCGACGAACCCACTCGACGGCAGTCTTCTTCTTCCGCTAGTGAATTGCAGTGTTAGAACGGCAACGGCGCGCAACCTTCACTCTCGAATGATCTTCTTTCCCGACGTGAGAGCGGCGCGGAACACCCACGAACAGCGGCGATCTACTCCACCACGAGGGCCACACGCCGATCTGCGACGGCAGCGGGAACTCTCCTGGGTATCGGCGACGCGTTTCTTGGTTCATTAA

Protein sequence

MTLVCTASSSTPATNPLDGSLLLPLVNCSVRTATARNLHSRMIFFPDVRAARNTHEQRRSTPPRGPHADLRRQRELSWVSATRFLVH
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..72

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CcUC07G139580CcUC07G139580gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC07G139580.1-exonCcUC07G139580.1-exon-CicolChr07:25759410..25759669exon
CcUC07G139580.1-exonCcUC07G139580.1-exon-CicolChr07:25759833..25759836exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC07G139580.1-cdsCcUC07G139580.1-cds-CicolChr07:25759410..25759669CDS
CcUC07G139580.1-cdsCcUC07G139580.1-cds-CicolChr07:25759833..25759836CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CcUC07G139580.1CcUC07G139580.1-proteinpolypeptide