CcUC07G129150.1 (mRNA) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCAACGAAAGCCCAAAAATTCGATTGCTCGTCGTCTCGTCGGCCCTTTACTGTTGCCGTTCGTCTCCTACAATTCAAAGTGAAGAATTGGAGCTCTCTGTCAAACGAAATTCTTCTTCATTAGCCTTTCAACTACTAAGGAATTCATGAAGCGACTGTCATGGTTCTTCTCCTCTAAACCTGTGAGTTTATCTTTCAGCTTTCTTGTATTTGTGCTTCGCGATTCTCTTGTCAATGTCCTTCATTTACCTTCTTAATCAAAATGGTGGCTGAATCCAGTGATTGCCTTTTTTGTATGCTCTTGTAGAGGCTTGGAGGTGTAAGGGGATATTCCTCGAGCAAAAAGGAGCTGGAAATTCATGGAATTAAGCATGCTATAGCCATTGCTTCTGGCAAAGGAGGTGTGGGCAAGTCCACCACTGCAGGTACTTTCTTTCCTTCTGTTGTCTTTTTCTTAATTTTACATTTTCGTGTATTTTTTTGGTTTTTTGGTATCGTAACTCTTTTTCTAGTTGTAATCTTAGTGGCTAACCAAAATGATTCCCCTGTACAATCTTCACTTTTCTCCATTTTTGTCTACCTCTAATGTTAAATTGCGTCCTTTTGAGTTTAGTTGCCAGGAGTTATCCAGAATGGATCATTGTAAAACTTTGATCAAAGGTGATTTAAAAAAAAAAGGATTTTTAATTGTTAGTTTGTTATTCTGACGTTTCTGATTGTCAGTCTCTATTGCTTTATGTGAATAATATCTCGCCTTCATCACTCATATTTCTAGTCTGTTATCGAGGCACTAATAAATCTTTCGTACCTATTACTATGTGGTGGTTGTTCTAATACAATTGAGTGGGTGGCAGTTAATTTGGCTGTTGCACTGGCTAACAAGTGTCAGCTGAAGGTTGGATTACTTGATGCTGATGTCTATGGACCCAATGTTCCAATCATGATGAAAATCCATCAAAAGCCAGAGTTGACTGAAGGTACTTTATAACATTTTGTACTTATATAAGTTGGTATAGTCAATGGTAGTATAGCTCAACTTACATAAAGCATGTGCTCTCAACGAAGAGGTTAAGTTGCTATAGCACTCATTTGGTCCTGTTGTAAGGATTTGATCTTATTTTCTGTTTTACGCCTGCCTGTTCTCAAACTACTCTTATTTAAATCTAAACTAACTTTTAACCTTCCCTAGTGTAATAGATTTCTGAACTGGCCATCATTTCTCACACTGATAATTACATTGATTTATTGTGGTCGACTTGATTTGGTTCAAGTTTGTTTCCATTTTAGATATTTGATGGCTGACAAAGTTAAATCACTTTAGATAGCACATGGGCATGAAACAACTAAACTTTGCTCAAGGTTTTAACTGAAGGTTATTGGTATTGAATGACAAACATACTCCAAGAAAAATAACACGATAGCAATTCTTATCTCCTCTATTCTCACCCTATAAATCACTTCCCTCCTCTACATGCACCATAGAGGCACTCGTTAGAATTCATATTGTCTCCATTTTATGCTGTATTGCAATAATCCTATGATCTCCAAGAAATTCTAGTTGGTTCAGTATTATATATGCCTTCTCGTGTGTATTTTCTTGATTTCAAGGCAGTATGCTTTCTTTAATTTACTGTGCCTGAAATTCTGTCTACCTTCAGAAGAATTATAGCCAGGCAGGCTAAGCTCGTTTGCTTTTTAGGCTTTGAGTGTGATTCCTAGTGAGCATCCTGATGTACACGTTTTAATCTTTTTTCTTTAAAGAATACAATTACCCAATAATGTATCATTTTATCGTTCTTTCTTTAACAGATAGGAAAATGGTTCCTGTTGAGAACTACGGAGTTAAATGCATGTCAATGGGATTACTCGTGGAAAACAATGCTGCTCTTGTGTGGAGGGGTCCTATGGTTTGTTTTCCCTAAACTTTCCGAGTGAATCCAGTATTTCAAGACAGCATGCTTTATTACTTTTCTTCCTGATTGATAAGTTTTTTCTCTCTATTTCTTGGCCCCCAAAGTGGCAATAGATCTCCTGTGACCGAGATAATAATTCATCCTTTTCATGAATATTTAGTTAATCTCCTTTTAAGTAAATGAAATTATAAGGAAAGGGGTTCACCTGATGGATTGGGACATTATCCCTTTGCCCACAGATCAACGGGCAAGTACTGTGGCCAACAGCTGGTAAGGAATGTGGCTCCCCTGTAGGAAGAAATGCTTTGGGAAACACTTGTGAACTTGAAGTATTTGGTGGTTGATCGCTAGCAAATTAAGTAGAGATAGGAGTAGAGCCCTGGTTTGTCGTGGCTAGTATTTGAATTGTTTTGTCGGTTTCCCTCATTTTAGGTTTTCCCTCATTTTAGATTGGTTCTCTTTCAAGGGAAATAATTTTGTTTGGGAAGGTGAGGAATAATGACGATGAAGTATGTTGAGCCTTTCCTGCTTGCTAATACCCACATAATGAGCAGAGCCATTGCCTTTTACTGTATCTTCAGCTTTAAATTTATTAAGTGTTTCATTGTAAGAGAATCGCTAATTAAGCCATCCTCTAGAGCACAGATCCAGCATTGCAATTGGCGTCCTTCCTAAAAGTGCATACAAGCTTGACTACTCAAATCTTCAAGAATTTTCTTTACCGAATCTCTTCCTCTCTGATTCTACTCTTCACCCAATGATTGTCATGTTAATTAGAAATCCAAATCCCTTTTAGTATCCAAGTATCTTTTTGTTGCTTTCCTTTGGGAAGTTTCATACTCATGAGAAGACTCAAAGGTTGCATCCAAATATCTCTCTTTGGAATATTCATAATATGTCTTGTATACAAGCTTTGGAAGATATCGACCATATTATTCAGGGTAATCAATCGAGTGGGGTGACATTACTTCTTACTCTAGTGCATGCAGTACTTGGTTCATTGCTAGGACACATAGCCATTGGTGCACCTTGCTGCTATTTCAAGGATTGATTATATGGGTTCTCCATCTGCATTCTTGCACCTTTATCCACCATATTCTCTATCTGCTTTTCTCCCAAGAATGTTCATCCAACCAACATTTAAATCCCTCTCTGAGAAAAATGGAACTGCAGGTCTGTTCCCTGTTACACGCTCCAGCAAGAGAATTCCAAAGCTATAAACGTTTGAACATCTGACTTCTTTGGTGGAACTTTATGATCTTACCTTCTTGTTGATTGCTTGAAGAGCCTAAAGACACGATTCATATTTTTCCAAGAACAATCCTAGATATTATGTTGCTAATCAGCTTTTGACTCAACTTCAATGCTTGCTTCCCTTTTTTCCTCGAAAACTGACTTTTACACAAAAGCACGCACTTCAAAATACTATGATTGAAGAATAATTTATTTTCACCATTGAACTCTTTCCACATTTCTTTAGAACTTGGCTAATTGTGCAGGTGTCAAGTGCTCTAGAGAAAATGACGAGGGGAGTTTCCTGGGGAGATCTCGATATTCTTGTTGTTGATATGCCTCCTGGTACAGGCGATGTTCAGATTACTATGTCACAGAGATTATCGCTCTCTGGTACGTAAAAATTTGTGGTTTCACCCCCTTTGTTTTTTGGCAGGTTAGTTATTGAAATTATTGTGTTTATAATCCAAATCCTATCTGTACTAAGTTATTTCCAAGTATGATGGTATAAATATAACCGTTTCTCTCTCGTACATATTTGTTATTCACAAATTTTATTTGTTTGTCACAACACTTAATATTCATTTTCCTTGCTGCTAGGTGCATTGATTGTTTCAACGCCTCAGGATGTTGCATTAATGGATGCTCGTAGGGGAATTAAAATGTTCTCTAATGTCCATGTTCCGGTGTGAATTTCTCCATGTTATTTTGTTAAAATTCCAAACTATCCTGATAGTGCAGTCTTGTCCGTTATCAACATTCTAAAAAGTATAAAAACGTTAGACTTTACCATATTAGCCCATCCTCATGCATCCTCACGGTGATAAGAATCTGTGTATAAGCTCTCTTCACTTTCACACAGATTGCTAAGTTTTCTGAAAGAATCTGAATGTTATTGACTGCTGCTTCAGATTTTGGGAATTGTAGAGAACATGAGCTACTTTACGTGTCCACGTTGTTGCGAACGCTCGTATATCTTTGGGAGCGGAGGAAGTCGTAAGGCAGCTGATGAGATGGGTATCACATTCCTCGGTGAGGTAAGTGCTAATACAACCCATTTGAATTATTTTTCATGACCAGTTATCTTGATTTCCAGATGATATTATCATAAGAATACATGAGTGCTAGGGGTGAACAATAAAACCGACCAAACCGAAATAATTGACAAAACCAAATTGAACTGAATAAAAAATTTGGTTTTTACTAAAGCATCGGTTTGTTTGATTTTAGATTTGAAAACAGAATCCAAAATCGAACTAAACATCTGCGGTTTGATTCGGTTTGGTATCTTTTTTTTCGAAAATTTTTGGTTTGATTTGGTTAGCCCTCAAATTGAACCAAACCGAACCATGAACGTCTGTAATGAGTACACGCATCATCAACGAAGAATTTCTGCCTTGGCTCAGGTACCATTGGAAGAGAAGAATAGGAAATGTTGTGATGAAGGTGTTCCTATTGTAATATCAGAACCAAATTCCTTAGTTTCTACAGCATATGTGGAAATTGCCCAGAAGGTCATGGAGCAAATTGAGGAAGTGGAGAGGCAAAAACTACTCCATCCACAGATTCAACTATAACCACAGCAGCCCCTTTGGGAAATTTGTTTTTCTTTTTATATATATTAGAGGAATAGAACATAATTTATTCAAGGAAGGAGGATATGTTTAATTACCGTAGAGTTATCAGTTATGCTAATTTTAATTTATTTTAAATAATTATATCAACATTCTTGTGATGACATTTCTTCTCCGGTTAATATTGATTTCTATTTGTTGG GGCAACGAAAGCCCAAAAATTCGATTGCTCGTCGTCTCGTCGGCCCTTTACTGTTGCCGTTCGTCTCCTACAATTCAAAGTGAAGAATTGGAGCTCTCTGTCAAACGAAATTCTTCTTCATTAGCCTTTCAACTACTAAGGAATTCATGAAGCGACTGTCATGGTTCTTCTCCTCTAAACCTAGGCTTGGAGGTGTAAGGGGATATTCCTCGAGCAAAAAGGAGCTGGAAATTCATGGAATTAAGCATGCTATAGCCATTGCTTCTGGCAAAGGAGGTGTGGGCAAGTCCACCACTGCAGTTAATTTGGCTGTTGCACTGGCTAACAAGTGTCAGCTGAAGGTTGGATTACTTGATGCTGATGTCTATGGACCCAATGTTCCAATCATGATGAAAATCCATCAAAAGCCAGAGTTGACTGAAGATAGGAAAATGGTTCCTGTTGAGAACTACGGAGTTAAATGCATGTCAATGGGATTACTCGTGGAAAACAATGCTGCTCTTGTGTGGAGGGGTCCTATGGTGTCAAGTGCTCTAGAGAAAATGACGAGGGGAGTTTCCTGGGGAGATCTCGATATTCTTGTTGTTGATATGCCTCCTGGTACAGGCGATGTTCAGATTACTATGTCACAGAGATTATCGCTCTCTGGTGCATTGATTGTTTCAACGCCTCAGGATGTTGCATTAATGGATGCTCGTAGGGGAATTAAAATGTTCTCTAATGTCCATGTTCCGATTTTGGGAATTGTAGAGAACATGAGCTACTTTACGTGTCCACGTTGTTGCGAACGCTCGTATATCTTTGGGAGCGGAGGAAGTCGTAAGGCAGCTGATGAGATGGGTATCACATTCCTCGGTGAGGTACCATTGGAAGAGAAGAATAGGAAATGTTGTGATGAAGGTGTTCCTATTGTAATATCAGAACCAAATTCCTTAGTTTCTACAGCATATGTGGAAATTGCCCAGAAGGTCATGGAGCAAATTGAGGAAGTGGAGAGGCAAAAACTACTCCATCCACAGATTCAACTATAACCACAGCAGCCCCTTTGGGAAATTTGTTTTTCTTTTTATATATATTAGAGGAATAGAACATAATTTATTCAAGGAAGGAGGATATGTTTAATTACCGTAGAGTTATCAGTTATGCTAATTTTAATTTATTTTAAATAATTATATCAACATTCTTGTGATGACATTTCTTCTCCGGTTAATATTGATTTCTATTTGTTGG ATGAAGCGACTGTCATGGTTCTTCTCCTCTAAACCTAGGCTTGGAGGTGTAAGGGGATATTCCTCGAGCAAAAAGGAGCTGGAAATTCATGGAATTAAGCATGCTATAGCCATTGCTTCTGGCAAAGGAGGTGTGGGCAAGTCCACCACTGCAGTTAATTTGGCTGTTGCACTGGCTAACAAGTGTCAGCTGAAGGTTGGATTACTTGATGCTGATGTCTATGGACCCAATGTTCCAATCATGATGAAAATCCATCAAAAGCCAGAGTTGACTGAAGATAGGAAAATGGTTCCTGTTGAGAACTACGGAGTTAAATGCATGTCAATGGGATTACTCGTGGAAAACAATGCTGCTCTTGTGTGGAGGGGTCCTATGGTGTCAAGTGCTCTAGAGAAAATGACGAGGGGAGTTTCCTGGGGAGATCTCGATATTCTTGTTGTTGATATGCCTCCTGGTACAGGCGATGTTCAGATTACTATGTCACAGAGATTATCGCTCTCTGGTGCATTGATTGTTTCAACGCCTCAGGATGTTGCATTAATGGATGCTCGTAGGGGAATTAAAATGTTCTCTAATGTCCATGTTCCGATTTTGGGAATTGTAGAGAACATGAGCTACTTTACGTGTCCACGTTGTTGCGAACGCTCGTATATCTTTGGGAGCGGAGGAAGTCGTAAGGCAGCTGATGAGATGGGTATCACATTCCTCGGTGAGGTACCATTGGAAGAGAAGAATAGGAAATGTTGTGATGAAGGTGTTCCTATTGTAATATCAGAACCAAATTCCTTAGTTTCTACAGCATATGTGGAAATTGCCCAGAAGGTCATGGAGCAAATTGAGGAAGTGGAGAGGCAAAAACTACTCCATCCACAGATTCAACTATAA MKRLSWFFSSKPRLGGVRGYSSSKKELEIHGIKHAIAIASGKGGVGKSTTAVNLAVALANKCQLKVGLLDADVYGPNVPIMMKIHQKPELTEDRKMVPVENYGVKCMSMGLLVENNAALVWRGPMVSSALEKMTRGVSWGDLDILVVDMPPGTGDVQITMSQRLSLSGALIVSTPQDVALMDARRGIKMFSNVHVPILGIVENMSYFTCPRCCERSYIFGSGGSRKAADEMGITFLGEVPLEEKNRKCCDEGVPIVISEPNSLVSTAYVEIAQKVMEQIEEVERQKLLHPQIQL Homology
BLAST of CcUC07G129150.1 vs. NCBI nr
Match: XP_038888219.1 (iron-sulfur protein NUBPL isoform X1 [Benincasa hispida]) HSP 1 Score: 562.4 bits (1448), Expect = 2.3e-156 Identity = 281/294 (95.58%), Postives = 289/294 (98.30%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. NCBI nr
Match: XP_008449374.1 (PREDICTED: iron-sulfur protein NUBPL [Cucumis melo] >KAA0057392.1 iron-sulfur protein NUBPL [Cucumis melo var. makuwa] >TYK30089.1 iron-sulfur protein NUBPL [Cucumis melo var. makuwa]) HSP 1 Score: 551.6 bits (1420), Expect = 4.1e-153 Identity = 275/294 (93.54%), Postives = 286/294 (97.28%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. NCBI nr
Match: XP_004140079.1 (iron-sulfur protein NUBPL isoform X1 [Cucumis sativus] >KGN47856.1 hypothetical protein Csa_003151 [Cucumis sativus]) HSP 1 Score: 544.7 bits (1402), Expect = 5.0e-151 Identity = 271/294 (92.18%), Postives = 283/294 (96.26%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. NCBI nr
Match: XP_022931224.1 (iron-sulfur protein NUBPL isoform X1 [Cucurbita moschata]) HSP 1 Score: 538.1 bits (1385), Expect = 4.7e-149 Identity = 271/294 (92.18%), Postives = 281/294 (95.58%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. NCBI nr
Match: KAG6606394.1 (Iron-sulfur protein NUBPL, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 535.8 bits (1379), Expect = 2.3e-148 Identity = 270/294 (91.84%), Postives = 281/294 (95.58%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. ExPASy Swiss-Prot
Match: Q54F15 (Iron-sulfur protein NUBPL OS=Dictyostelium discoideum OX=44689 GN=nubpl PE=3 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 3.1e-79 Identity = 144/285 (50.53%), Postives = 207/285 (72.63%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. ExPASy Swiss-Prot
Match: Q8TB37 (Iron-sulfur protein NUBPL OS=Homo sapiens OX=9606 GN=NUBPL PE=1 SV=3) HSP 1 Score: 296.2 bits (757), Expect = 4.1e-79 Identity = 143/256 (55.86%), Postives = 189/256 (73.83%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. ExPASy Swiss-Prot
Match: Q9CWD8 (Iron-sulfur protein NUBPL OS=Mus musculus OX=10090 GN=Nubpl PE=1 SV=2) HSP 1 Score: 293.5 bits (750), Expect = 2.6e-78 Identity = 143/257 (55.64%), Postives = 189/257 (73.54%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. ExPASy Swiss-Prot
Match: O24999 (Iron-sulfur cluster carrier protein OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=mrp PE=3 SV=2) HSP 1 Score: 256.9 bits (655), Expect = 2.7e-67 Identity = 129/258 (50.00%), Postives = 178/258 (68.99%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. ExPASy Swiss-Prot
Match: Q9ZMM5 (Iron-sulfur cluster carrier protein OS=Helicobacter pylori (strain J99 / ATCC 700824) OX=85963 GN=mrp PE=3 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 1.0e-66 Identity = 128/258 (49.61%), Postives = 178/258 (68.99%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. ExPASy TrEMBL
Match: A0A5A7UNF7 (Iron-sulfur protein NUBPL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00620 PE=3 SV=1) HSP 1 Score: 551.6 bits (1420), Expect = 2.0e-153 Identity = 275/294 (93.54%), Postives = 286/294 (97.28%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. ExPASy TrEMBL
Match: A0A1S3BLW5 (iron-sulfur protein NUBPL OS=Cucumis melo OX=3656 GN=LOC103491273 PE=3 SV=1) HSP 1 Score: 551.6 bits (1420), Expect = 2.0e-153 Identity = 275/294 (93.54%), Postives = 286/294 (97.28%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. ExPASy TrEMBL
Match: A0A0A0KJA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G408150 PE=3 SV=1) HSP 1 Score: 544.7 bits (1402), Expect = 2.4e-151 Identity = 271/294 (92.18%), Postives = 283/294 (96.26%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. ExPASy TrEMBL
Match: A0A6J1ETQ4 (iron-sulfur protein NUBPL isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437465 PE=3 SV=1) HSP 1 Score: 538.1 bits (1385), Expect = 2.3e-149 Identity = 271/294 (92.18%), Postives = 281/294 (95.58%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. ExPASy TrEMBL
Match: A0A6J1CW38 (iron-sulfur protein NUBPL OS=Momordica charantia OX=3673 GN=LOC111015332 PE=3 SV=1) HSP 1 Score: 535.0 bits (1377), Expect = 1.9e-148 Identity = 267/294 (90.82%), Postives = 284/294 (96.60%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. TAIR 10
Match: AT4G19540.1 (IND1(iron-sulfur protein required for NADH dehydrogenase)-like ) HSP 1 Score: 370.2 bits (949), Expect = 1.6e-102 Identity = 178/257 (69.26%), Postives = 214/257 (83.27%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. TAIR 10
Match: AT3G24430.1 (ATP binding ) HSP 1 Score: 190.3 bits (482), Expect = 2.2e-48 Identity = 103/256 (40.23%), Postives = 157/256 (61.33%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. TAIR 10
Match: AT5G50960.1 (nucleotide binding protein 35 ) HSP 1 Score: 153.7 bits (387), Expect = 2.3e-37 Identity = 96/289 (33.22%), Postives = 149/289 (51.56%), Query Frame = 0
BLAST of CcUC07G129150.1 vs. TAIR 10
Match: AT5G24020.1 (septum site-determining protein (MIND) ) HSP 1 Score: 62.0 bits (149), Expect = 9.2e-10 Identity = 64/288 (22.22%), Postives = 123/288 (42.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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