CcUC06G117670.1 (mRNA) Watermelon (PI 537277) v1

Overview
NameCcUC06G117670.1
TypemRNA
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr06: 10703750 .. 10705035 (+)
Sequence length228
RNA-Seq ExpressionCcUC06G117670.1
SyntenyCcUC06G117670.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTAGTCTGTAAAGGTCTGAGAAATAGTTGTATGCATTCTATTTTTATTGTCTGGCACTTGGTCCATCTTGTGCTAATCTGTTTAGCTTGAATTATGACAATAAGAAATATAAAGTTCCTCTCATCTTTTATTGTTATCTTCTCTTTCTATGATGCAGATCTTATTCTCCTTGTTTTCTTCTTTAATAATGCTGCCCTTGTGATCTACTACCAAGCAAACTGCTGATTTTTCTCATAGTCAATAGATCTACACCAACTTTTACTTGCTTTATAATAATATCACCTTGCGTTTTTCCAATATATTTGCATCTCTCCCCTGTTATATTGAAGGACAAGGAAGCTAACAAGTCGGTTTTGCTTTAGTTCATGAATTTTATTTCCAGCATTCGGGAGGCTCGGAGAGCGACAAGATCTCTTCAATTGAGGTAAGAATACTTTCTTTTTCTCTTTCTGTTGTAGGGTGAGAATGGTTTGTTGTTGCAAGTCTGCGACGATTGAATATCTTCGTCAAAGAATGCTTTTGTCATTTTTCTCTCCAAAATTGCATCGTCGTGCACAGAACGATGTGCAGATAAGAATAGTGATTTGTTGCGGTTAGTTAATCATTGAACATAAATTCAAATTTATAGCTGGAACTTGGTATTGGTGATGATACAGGGTGTTGAATCATTTTTCAAGCTACTGGCTTAGATTAGAACAGGAAACACATTTTCAATTACAGGCACACACTTTGCTCTTCTGCTTAAGAAATAGTATTTCAAGTTCTCTAAATATATAACCTAAGCGAGAAGTGAATTTTGTTATAGATTTTGAATTCTCTCTATCCTATCAAATTTAAATTTGCTAAACATGCATTATCATATTTAGAATATAGGAAATTTGCTAAACATGCATTATCATATTTAGAATATAGGAGGGGCTGCTTTTACAAGGCCATGAGAATAATGGTAAGAATGCACTTGGGGTGTTTGCGGCAAAAAGTGGAGTTGTGAAGTCATGGACCCACAATGCAAGTTAACAAAGCATAAAATTGATGTTTTTAATCGTGGGCCCACGAACTCTTGGACCAAACAAAGAGTGGAGTTGACTCCAACTCCTTGGGTCAAACACTCCATTGGTATGCATTGGTGACCAATGACTCGATTTGGATTCATTAGGCACCAATCTTACATACTCACCTCTAAATATTAAAGATAAATTGAGATGTACCGCCTATATTTTGTATTATATTTTTTAAGGATACCCAATTGTAAAATTTTGGTATGGCACAAAGTGTCGATAA

mRNA sequence

ATGGATTACATTCGGGAGGCTCGGAGAGCGACAAGATCTCTTCAATTGAGGGTGAGAATGGTTTGTTGTTGCAAGTCTGCGACGATTGAATATCTTCGTCAAAGAATGCTTTTGTCATTTTTCTCTCCAAAATTGCATCGTCGTGCACAGAACGATGTGCAGATAAGAATAGTGATTTGTTGCGGATACCCAATTGTAAAATTTTGGTATGGCACAAAGTGTCGATAA

Coding sequence (CDS)

ATGGATTACATTCGGGAGGCTCGGAGAGCGACAAGATCTCTTCAATTGAGGGTGAGAATGGTTTGTTGTTGCAAGTCTGCGACGATTGAATATCTTCGTCAAAGAATGCTTTTGTCATTTTTCTCTCCAAAATTGCATCGTCGTGCACAGAACGATGTGCAGATAAGAATAGTGATTTGTTGCGGATACCCAATTGTAAAATTTTGGTATGGCACAAAGTGTCGATAA

Protein sequence

MDYIREARRATRSLQLRVRMVCCCKSATIEYLRQRMLLSFFSPKLHRRAQNDVQIRIVICCGYPIVKFWYGTKCR
Homology
The following BLAST results are available for this feature:
BLAST of CcUC06G117670.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC06G117670.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC06G117670.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC06G117670.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CcUC06G117670CcUC06G117670gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC06G117670.1-exonCcUC06G117670.1-exon-CicolChr06:10703750..10703757exon
CcUC06G117670.1-exonCcUC06G117670.1-exon-CicolChr06:10704137..10704178exon
CcUC06G117670.1-exonCcUC06G117670.1-exon-CicolChr06:10704213..10704346exon
CcUC06G117670.1-exonCcUC06G117670.1-exon-CicolChr06:10704992..10705035exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC06G117670.1-cdsCcUC06G117670.1-cds-CicolChr06:10703750..10703757CDS
CcUC06G117670.1-cdsCcUC06G117670.1-cds-CicolChr06:10704137..10704178CDS
CcUC06G117670.1-cdsCcUC06G117670.1-cds-CicolChr06:10704213..10704346CDS
CcUC06G117670.1-cdsCcUC06G117670.1-cds-CicolChr06:10704992..10705035CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CcUC06G117670.1CcUC06G117670.1-proteinpolypeptide