CcUC06G112310.1 (mRNA) Watermelon (PI 537277) v1

Overview
NameCcUC06G112310.1
TypemRNA
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
LocationCicolChr06: 3305880 .. 3307211 (+)
Sequence length768
RNA-Seq ExpressionCcUC06G112310.1
SyntenyCcUC06G112310.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTTAAACTTCGTCGTCAACGATATGCGCGCCCTCATAAATGCGGCCATGACATTGGGCATGGTGGATAGAATGGCGGATGTAACATTTTCGCCGGAAATGTTTTGCATAATGGCCGATTCATATCCTGCCATTCACGCCGCCATCGGCCTTCAACTCTGGCCTCCATTCTTTGACCATTACGTCTGCAGTGGGCTTCAACATTCCTGGTTTTACCTTACCGCCATTTTCCCTCTTGCCCTAGACTTACAAGATTCTGGTTACACTTCTTTGACCTTCACTGTCCCTTACCCCGAACGTGCCCAACTCAAATTCCAAGGCCCAAATGGTAATTCTCCTCCTCTTCGATCTTTTTCCAACAAATTAAATCATTTCTTATTTCTTTAATTCCTTTCTTTCATTTCTTTTTAATTTCAGACCTTCTTCGCGAAATTGATTTCGAAATGTGTTTTTCCCATCGCCCCATGTACATCAACGAATTTGATCTCTCTTTTTTCGTTACCATGGAGTCTCAACATTTCTCCAACATTATCGCTGAATATCATATGTTTGATTACGGTAATAATTACATCTTCTTTCATTTTTAAGTTTTAGGTTTAAATACCGCCCCTAAAGTTTGTTCAATTTAGTAGTCTATCTACTTTTAAAGATTTTCAATCAATCCTAAGTTTAGGATATTCACATATTGTATTTGTTATTATTAATGTGAAATTATGGCTGGTCTCACTCGTAGCTTGTACAAAATAATGACATATATATTCAAAAATATTGTTTTCTATTAGCATTTTTACTATAAATCATATTGGTAGTAGAAATTAACTATGAGATACTAAATTAAATTATAATAAAAGTATATGGATACGGAGGCTAAAATTGTATTTTGACTTTATATTTTTATATATATAATATATGTGTATGAGTTAATTTCACATTTTGATGGTTTATTATATTATTTAACAGTTCATGTTACTATAACGAGCGCACGAGTGACATTCTCTTATGCAATTATGCAAGAGACAAGTCTTAGCCCACAGGTATTGTATATTGATTTTTGGAGGATGTTAATTACATAACATATAAAAATGGTTTAATTATTGTTAAATTTAGGATGGAGAGTGCATAATTGGAGGTATTAGAGCACCAAATCAAATTCAATTCATAACCAATTTGAGTCCACCAGAAGCTTTCTATCATATTGCAAGTCAAACGAAGAGGGTATGGTTCTTCAAGTCATTTAGTTCCAACAAAGGTGTAATTACTGCCCCTCTTGGATTGAATGGTCGACTTGTCGCTTTTTTCTGTAATGTGTTTAGAACAGATGATCATTAA

mRNA sequence

ATGTCGTTAAACTTCGTCGTCAACGATATGCGCGCCCTCATAAATGCGGCCATGACATTGGGCATGGTGGATAGAATGGCGGATGTAACATTTTCGCCGGAAATGTTTTGCATAATGGCCGATTCATATCCTGCCATTCACGCCGCCATCGGCCTTCAACTCTGGCCTCCATTCTTTGACCATTACGTCTGCAGTGGGCTTCAACATTCCTGGTTTTACCTTACCGCCATTTTCCCTCTTGCCCTAGACTTACAAGATTCTGGTTACACTTCTTTGACCTTCACTGTCCCTTACCCCGAACGTGCCCAACTCAAATTCCAAGGCCCAAATGACCTTCTTCGCGAAATTGATTTCGAAATGTGTTTTTCCCATCGCCCCATGTACATCAACGAATTTGATCTCTCTTTTTTCGTTACCATGGAGTCTCAACATTTCTCCAACATTATCGCTGAATATCATATGTTTGATTACGTTCATGTTACTATAACGAGCGCACGAGTGACATTCTCTTATGCAATTATGCAAGAGACAAGTCTTAGCCCACAGGATGGAGAGTGCATAATTGGAGGTATTAGAGCACCAAATCAAATTCAATTCATAACCAATTTGAGTCCACCAGAAGCTTTCTATCATATTGCAAGTCAAACGAAGAGGGTATGGTTCTTCAAGTCATTTAGTTCCAACAAAGGTGTAATTACTGCCCCTCTTGGATTGAATGGTCGACTTGTCGCTTTTTTCTGTAATGTGTTTAGAACAGATGATCATTAA

Coding sequence (CDS)

ATGTCGTTAAACTTCGTCGTCAACGATATGCGCGCCCTCATAAATGCGGCCATGACATTGGGCATGGTGGATAGAATGGCGGATGTAACATTTTCGCCGGAAATGTTTTGCATAATGGCCGATTCATATCCTGCCATTCACGCCGCCATCGGCCTTCAACTCTGGCCTCCATTCTTTGACCATTACGTCTGCAGTGGGCTTCAACATTCCTGGTTTTACCTTACCGCCATTTTCCCTCTTGCCCTAGACTTACAAGATTCTGGTTACACTTCTTTGACCTTCACTGTCCCTTACCCCGAACGTGCCCAACTCAAATTCCAAGGCCCAAATGACCTTCTTCGCGAAATTGATTTCGAAATGTGTTTTTCCCATCGCCCCATGTACATCAACGAATTTGATCTCTCTTTTTTCGTTACCATGGAGTCTCAACATTTCTCCAACATTATCGCTGAATATCATATGTTTGATTACGTTCATGTTACTATAACGAGCGCACGAGTGACATTCTCTTATGCAATTATGCAAGAGACAAGTCTTAGCCCACAGGATGGAGAGTGCATAATTGGAGGTATTAGAGCACCAAATCAAATTCAATTCATAACCAATTTGAGTCCACCAGAAGCTTTCTATCATATTGCAAGTCAAACGAAGAGGGTATGGTTCTTCAAGTCATTTAGTTCCAACAAAGGTGTAATTACTGCCCCTCTTGGATTGAATGGTCGACTTGTCGCTTTTTTCTGTAATGTGTTTAGAACAGATGATCATTAA

Protein sequence

MSLNFVVNDMRALINAAMTLGMVDRMADVTFSPEMFCIMADSYPAIHAAIGLQLWPPFFDHYVCSGLQHSWFYLTAIFPLALDLQDSGYTSLTFTVPYPERAQLKFQGPNDLLREIDFEMCFSHRPMYINEFDLSFFVTMESQHFSNIIAEYHMFDYVHVTITSARVTFSYAIMQETSLSPQDGECIIGGIRAPNQIQFITNLSPPEAFYHIASQTKRVWFFKSFSSNKGVITAPLGLNGRLVAFFCNVFRTDDH
Homology
BLAST of CcUC06G112310.1 vs. NCBI nr
Match: XP_038876014.1 (uncharacterized protein LOC120068348 [Benincasa hispida])

HSP 1 Score: 390.2 bits (1001), Expect = 1.4e-104
Identity = 184/253 (72.73%), Postives = 216/253 (85.38%), Query Frame = 0

Query: 1   MSLNFVVNDMRALINAAMTLGMVDRMADVTFSPEMFCIMADSYPAIHAAIGLQLWPPFFD 60
           M  NFVVNDMR LINAA  +GMVD MADVTFSPEM CIMADSY +I AAIG+QLWPPFFD
Sbjct: 1   MLFNFVVNDMRTLINAATAVGMVDTMADVTFSPEMLCIMADSYVSIKAAIGIQLWPPFFD 60

Query: 61  HYVC-SGLQHSWFYLTAIFPLALDLQDSGYTSLTFTV--PYPERAQLKFQGPNDLLREID 120
           HY C + LQ SWFYLT IFPL L+L DSGYTS TF++  PY ERA+LKF+GPN LL EI+
Sbjct: 61  HYFCINNLQRSWFYLTKIFPLTLELLDSGYTSFTFSIIEPYEERAKLKFEGPNGLLHEIE 120

Query: 121 FEMCFSHRPMYINEFDLSFFVTMESQHFSNIIAEYHMFDYVHVTITSARVTFSYAIMQET 180
           F++ +SH P+Y+ EFDLS FV+++SQ FS+I+ EYHMFDYVHVTITS RVTFSYAI+QET
Sbjct: 121 FKLYYSHHPLYVGEFDLSVFVSLDSQEFSSIVDEYHMFDYVHVTITSTRVTFSYAIVQET 180

Query: 181 SLSPQDGECIIGGIRAPNQIQFITNLSPPEAFYHIASQTKRVWFFKSFSSNKGVITAPLG 240
            L+PQDG+C+IGG+RAPNQIQFI  L+P E FYHIA + KR+WFFK+F+S KGVITAP+G
Sbjct: 181 ILTPQDGQCLIGGVRAPNQIQFIITLAPAEVFYHIAGEAKRIWFFKAFNSTKGVITAPIG 240

Query: 241 LNGRLVAFFCNVF 251
           LNGRLVAFFC+VF
Sbjct: 241 LNGRLVAFFCDVF 253

BLAST of CcUC06G112310.1 vs. NCBI nr
Match: XP_008459734.1 (PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo])

HSP 1 Score: 358.6 bits (919), Expect = 4.4e-95
Identity = 171/251 (68.13%), Postives = 206/251 (82.07%), Query Frame = 0

Query: 1   MSLNFVVNDMRALINAAMTLGMVDRMADVTFSPEMFCIMADSYPAIHAAIGLQLWPPFFD 60
           MS NFVVN+M+ LI+A  TLG+ D++AD TFSPEMFC+M DS  +IH+ IGLQLWPPFFD
Sbjct: 1   MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFD 60

Query: 61  HYVCSGLQHSWFYLTAIFPLALDLQDSGYTSLTFTV-PYPERAQLKFQGPNDLLREIDFE 120
           HY CS LQ+SWF+   IFPLA DLQDSGYTS +F++ P P+ AQ+KFQGPN LL E +FE
Sbjct: 61  HYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNPDLAQIKFQGPNGLLHETNFE 120

Query: 121 MCFSHRPMYINEFDLSFFVTMESQHFSNIIAEYHMFDYVHVTITSARVTFSYAIMQETSL 180
           + +SH P+ I +FDLS FV+M+SQ FSN+I++YHMFD VHVTITS RV FSY+IMQET L
Sbjct: 121 LVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETIL 180

Query: 181 SPQDGECIIGGIRAPNQIQFITNLSPPEAFYHIASQTKRVWFFKSFSSNKGVITAPLGLN 240
           + Q+G+CIIGGI+APNQ+QFI  L P E F HIASQTKRVWFFK  +SNKG+ITAPLGLN
Sbjct: 181 NQQNGQCIIGGIKAPNQVQFILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLN 240

Query: 241 GRLVAFFCNVF 251
            RLVA F +VF
Sbjct: 241 SRLVACFFDVF 251

BLAST of CcUC06G112310.1 vs. NCBI nr
Match: XP_004146827.2 (uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus] >KGN59826.1 hypothetical protein Csa_001355 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 8.1e-89
Identity = 158/250 (63.20%), Postives = 199/250 (79.60%), Query Frame = 0

Query: 2   SLNFVVNDMRALINAAMTLGMVDRMADVTFSPEMFCIMADSYPAIHAAIGLQLWPPFFDH 61
           S NF+VN+MR L++A  TLG+ D   D TFSPEMFC+MADS  +IH+AIGLQLWPPFFDH
Sbjct: 3   SFNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFFDH 62

Query: 62  YVCSGLQHSWFYLTAIFPLALDLQDSGYTSLTFTVPY-PERAQLKFQGPNDLLREIDFEM 121
           Y C  L++SWF+ + IFPLA  L+D GYTS +F++   P  AQ++FQGP  LL E+   +
Sbjct: 63  YFCRDLKNSWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPHHAQIEFQGPTRLLLEVTLRL 122

Query: 122 CFSHRPMYINEFDLSFFVTMESQHFSNIIAEYHMFDYVHVTITSARVTFSYAIMQETSLS 181
            F H P+ I++FDLS FV+M+SQ FSN+I++YHMFD VHVTITS RV FSY+ MQET LS
Sbjct: 123 VFCHLPLRIHQFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQETILS 182

Query: 182 PQDGECIIGGIRAPNQIQFITNLSPPEAFYHIASQTKRVWFFKSFSSNKGVITAPLGLNG 241
           PQ+G+CIIGG+RAP++++F+  L P E F HIASQTKRVWFFK  +SN+G+ITAPLGLN 
Sbjct: 183 PQNGQCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPLGLNA 242

Query: 242 RLVAFFCNVF 251
           RLVAFFC+VF
Sbjct: 243 RLVAFFCDVF 252

BLAST of CcUC06G112310.1 vs. NCBI nr
Match: XP_011652354.1 (uncharacterized protein LOC101206630 isoform X2 [Cucumis sativus])

HSP 1 Score: 328.6 bits (841), Expect = 4.9e-86
Identity = 157/250 (62.80%), Postives = 196/250 (78.40%), Query Frame = 0

Query: 2   SLNFVVNDMRALINAAMTLGMVDRMADVTFSPEMFCIMADSYPAIHAAIGLQLWPPFFDH 61
           S NF+VN+MR L++A  TLG+ D   D TFSPEMFC+MADS  +IH+AIGLQLWPPFFDH
Sbjct: 3   SFNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFFDH 62

Query: 62  YVCSGLQHSWFYLTAIFPLALDLQDSGYTSLTFTVPY-PERAQLKFQGPNDLLREIDFEM 121
           Y C  L++SWF+ + IFPLA  L+D GYTS +F++   P  AQ++FQGP  LL E+   +
Sbjct: 63  YFCRDLKNSWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPHHAQIEFQGPTRLLLEVTLRL 122

Query: 122 CFSHRPMYINEFDLSFFVTMESQHFSNIIAEYHMFDYVHVTITSARVTFSYAIMQETSLS 181
            F H P+ I++FDLS FV+M+SQ FSN+I++YHMFD VHVTITS RV FSY+ MQET LS
Sbjct: 123 VFCHLPLRIHQFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQETILS 182

Query: 182 PQDGECIIGGIRAPNQIQFITNLSPPEAFYHIASQTKRVWFFKSFSSNKGVITAPLGLNG 241
           PQ   CIIGG+RAP++++F+  L P E F HIASQTKRVWFFK  +SN+G+ITAPLGLN 
Sbjct: 183 PQ---CIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPLGLNA 242

Query: 242 RLVAFFCNVF 251
           RLVAFFC+VF
Sbjct: 243 RLVAFFCDVF 249

BLAST of CcUC06G112310.1 vs. NCBI nr
Match: KAE8646781.1 (hypothetical protein Csa_005116, partial [Cucumis sativus])

HSP 1 Score: 309.3 bits (791), Expect = 3.1e-80
Identity = 151/254 (59.45%), Postives = 196/254 (77.17%), Query Frame = 0

Query: 2   SLNFVVNDMRALINAAMTLGMVDRMADVTFSPEMFCIMADSYPAIHAAIGLQLWPPFFDH 61
           S    V+DM+ LI+  +TLG+VD MAD  FSP+ FCIMADS  +IH+A G+QLWPPFFD 
Sbjct: 17  SFRVAVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFFDS 76

Query: 62  YVCSGL-QHSWFYLTAIFPLALDLQDSGYTSLTFTVPYPER-----AQLKFQGPNDLLRE 121
           +    + Q  WF LT +FPLA++L +SGYTSLTF++   ER     AQ KF+GPN LLR+
Sbjct: 77  FYSDDIRQLFWFRLTHLFPLAVELLESGYTSLTFSI---ERFRYNYAQFKFEGPNGLLRD 136

Query: 122 IDFEMCFSHRPMYINEFDLSFFVTMESQHFSNIIAEYHMFDYVHVTITSARVTFSYAIMQ 181
           ++F +    RP+ I + DLS FV+M+S+ FSNII+EYHMFDYV V ITS RV+FSYAI+Q
Sbjct: 137 VNFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQ 196

Query: 182 ETSLSPQDGECIIGGIRAPNQIQFITNLSPPEAFYHIASQTKRVWFFKSFSSNKGVITAP 241
           ET ++P+DG+C+IGG+RAPNQ+QFI  +S P+AFYH ASQ+KR+W FK  +S KG+ITAP
Sbjct: 197 ETIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLFKEVNSTKGIITAP 256

Query: 242 LGLNGRLVAFFCNV 250
           LGL GRLV+FFC+V
Sbjct: 257 LGLYGRLVSFFCDV 267

BLAST of CcUC06G112310.1 vs. ExPASy TrEMBL
Match: A0A1S3CBB9 (uncharacterized protein LOC103498776 OS=Cucumis melo OX=3656 GN=LOC103498776 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 2.1e-95
Identity = 171/251 (68.13%), Postives = 206/251 (82.07%), Query Frame = 0

Query: 1   MSLNFVVNDMRALINAAMTLGMVDRMADVTFSPEMFCIMADSYPAIHAAIGLQLWPPFFD 60
           MS NFVVN+M+ LI+A  TLG+ D++AD TFSPEMFC+M DS  +IH+ IGLQLWPPFFD
Sbjct: 1   MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFD 60

Query: 61  HYVCSGLQHSWFYLTAIFPLALDLQDSGYTSLTFTV-PYPERAQLKFQGPNDLLREIDFE 120
           HY CS LQ+SWF+   IFPLA DLQDSGYTS +F++ P P+ AQ+KFQGPN LL E +FE
Sbjct: 61  HYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNPDLAQIKFQGPNGLLHETNFE 120

Query: 121 MCFSHRPMYINEFDLSFFVTMESQHFSNIIAEYHMFDYVHVTITSARVTFSYAIMQETSL 180
           + +SH P+ I +FDLS FV+M+SQ FSN+I++YHMFD VHVTITS RV FSY+IMQET L
Sbjct: 121 LVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETIL 180

Query: 181 SPQDGECIIGGIRAPNQIQFITNLSPPEAFYHIASQTKRVWFFKSFSSNKGVITAPLGLN 240
           + Q+G+CIIGGI+APNQ+QFI  L P E F HIASQTKRVWFFK  +SNKG+ITAPLGLN
Sbjct: 181 NQQNGQCIIGGIKAPNQVQFILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLN 240

Query: 241 GRLVAFFCNVF 251
            RLVA F +VF
Sbjct: 241 SRLVACFFDVF 251

BLAST of CcUC06G112310.1 vs. ExPASy TrEMBL
Match: A0A0A0LIF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848840 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.9e-89
Identity = 158/250 (63.20%), Postives = 199/250 (79.60%), Query Frame = 0

Query: 2   SLNFVVNDMRALINAAMTLGMVDRMADVTFSPEMFCIMADSYPAIHAAIGLQLWPPFFDH 61
           S NF+VN+MR L++A  TLG+ D   D TFSPEMFC+MADS  +IH+AIGLQLWPPFFDH
Sbjct: 3   SFNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFFDH 62

Query: 62  YVCSGLQHSWFYLTAIFPLALDLQDSGYTSLTFTVPY-PERAQLKFQGPNDLLREIDFEM 121
           Y C  L++SWF+ + IFPLA  L+D GYTS +F++   P  AQ++FQGP  LL E+   +
Sbjct: 63  YFCRDLKNSWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPHHAQIEFQGPTRLLLEVTLRL 122

Query: 122 CFSHRPMYINEFDLSFFVTMESQHFSNIIAEYHMFDYVHVTITSARVTFSYAIMQETSLS 181
            F H P+ I++FDLS FV+M+SQ FSN+I++YHMFD VHVTITS RV FSY+ MQET LS
Sbjct: 123 VFCHLPLRIHQFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQETILS 182

Query: 182 PQDGECIIGGIRAPNQIQFITNLSPPEAFYHIASQTKRVWFFKSFSSNKGVITAPLGLNG 241
           PQ+G+CIIGG+RAP++++F+  L P E F HIASQTKRVWFFK  +SN+G+ITAPLGLN 
Sbjct: 183 PQNGQCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPLGLNA 242

Query: 242 RLVAFFCNVF 251
           RLVAFFC+VF
Sbjct: 243 RLVAFFCDVF 252

BLAST of CcUC06G112310.1 vs. ExPASy TrEMBL
Match: A0A0A0KFM5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106730 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 3.7e-79
Identity = 149/254 (58.66%), Postives = 195/254 (76.77%), Query Frame = 0

Query: 2   SLNFVVNDMRALINAAMTLGMVDRMADVTFSPEMFCIMADSYPAIHAAIGLQLWPPFFDH 61
           S    V+DM+ LI++ +TLG+VD MAD  FSP+ FCIMADS  +IH+A G+QLWPPFFD 
Sbjct: 3   SFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFFDS 62

Query: 62  YVCSGL-QHSWFYLTAIFPLALDLQDSGYTSLTFTVPYPER-----AQLKFQGPNDLLRE 121
           +    + Q  WF LT +F LA++L +SGYTSLTF++   ER     AQ KF+GPN LLR+
Sbjct: 63  FYSDDIRQLFWFRLTHLFTLAVELLESGYTSLTFSI---ERFRYNYAQFKFEGPNGLLRD 122

Query: 122 IDFEMCFSHRPMYINEFDLSFFVTMESQHFSNIIAEYHMFDYVHVTITSARVTFSYAIMQ 181
           ++F +    RP+ I + DLS FV+M+S+ FSNII+EYHMFDYV V ITS RV+FSYAI+Q
Sbjct: 123 VNFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQ 182

Query: 182 ETSLSPQDGECIIGGIRAPNQIQFITNLSPPEAFYHIASQTKRVWFFKSFSSNKGVITAP 241
           ET ++P+DG+C+IGG+RAPNQ+QFI  +S P AF+H ASQ+KR+W FK  +S KG+ITAP
Sbjct: 183 ETIITPEDGQCLIGGVRAPNQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAP 242

Query: 242 LGLNGRLVAFFCNV 250
           LGL GRLV+FFC+V
Sbjct: 243 LGLYGRLVSFFCDV 253

BLAST of CcUC06G112310.1 vs. ExPASy TrEMBL
Match: A0A5D3DMK7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003150 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 6.3e-79
Identity = 150/250 (60.00%), Postives = 191/250 (76.40%), Query Frame = 0

Query: 2   SLNFVVNDMRALINAAMTLGMVDRMADVTFSPEMFCIMADSYPAIHAAIGLQLWPPFFDH 61
           S    VNDM+ LI+  +TLG+VD MAD  FSP+MFCIMADS  +IH+A G++L PPFFD 
Sbjct: 3   SFRVSVNDMKVLIDPLITLGLVDIMADGIFSPDMFCIMADSDVSIHSAFGIELLPPFFDT 62

Query: 62  YVCSGL-QHSWFYLTAIFPLALDLQDSGYTSLTFTVP--YPERAQLKFQGPNDLLREIDF 121
           +    + Q  WF LT +FPLA+ L +SGYTS TF++       AQ +F+GPN LLRE++F
Sbjct: 63  FYADEVRQLFWFRLTHLFPLAVQLLESGYTSFTFSIERFRYNHAQFRFEGPNGLLREVNF 122

Query: 122 EMCFSHRPMYINEFDLSFFVTMESQHFSNIIAEYHMFDYVHVTITSARVTFSYAIMQETS 181
            +    RP+ I E DLS FVTM+SQ FSNII+EYHMFDYV V IT+ RV+FSYAI+QET 
Sbjct: 123 LLTPVVRPLSIGEIDLSAFVTMDSQEFSNIISEYHMFDYVQVIITNRRVSFSYAIIQETI 182

Query: 182 LSPQDGECIIGGIRAPNQIQFITNLSPPEAFYHIASQTKRVWFFKSFSSNKGVITAPLGL 241
           ++PQDG+CIIGGIR PN++QFI  +S P+AFYH ASQ+KR+W FK  +S KG+ITAPLGL
Sbjct: 183 ITPQDGQCIIGGIRPPNEVQFIITMSQPDAFYHFASQSKRIWLFKEVNSTKGIITAPLGL 242

Query: 242 NGRLVAFFCN 249
           +GRLV+FFC+
Sbjct: 243 HGRLVSFFCD 252

BLAST of CcUC06G112310.1 vs. ExPASy TrEMBL
Match: A0A6J1L2R2 (uncharacterized protein LOC111499308 OS=Cucurbita maxima OX=3661 GN=LOC111499308 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.5e-75
Identity = 138/244 (56.56%), Postives = 179/244 (73.36%), Query Frame = 0

Query: 5   FVVNDMRALINAAMTLGMVDRMADVTFSPEMFCIMADSYPAIHAAIGLQLWPPFFDHYVC 64
           FV+N M+ L++AA  +   D MAD+ FS EMF IMADSYPA+   I L LWP FFD YVC
Sbjct: 9   FVLNQMQDLVDAASVVASADDMADMKFSREMFAIMADSYPALGGVIALHLWPQFFDEYVC 68

Query: 65  SGLQHSWFYLTAIFPLALDLQDSGYTSLTFTVPYPERAQLKFQGPNDLLREIDFEMCFSH 124
           + L  SW ++  +FPL +D+++SG+ SL+FTV YPE A+LKFQ PN L  E++FE+  S 
Sbjct: 69  NELLKSWTFVKNLFPLMIDMEESGFNSLSFTVTYPESAELKFQAPNGLSNEVEFELIPSL 128

Query: 125 RPMYINEFDLSFFVTMESQHFSNIIAEYHMFDYVHVTITSARVTFSYAIMQETSLSPQDG 184
            P+ + +FD S FV+++S+ F NI+ EYHMFDYVHVT+TS RV FSYAIM ET L+ +DG
Sbjct: 129 DPLEVGDFDFSSFVSLDSEEFVNIVTEYHMFDYVHVTVTSTRVIFSYAIMLETILTQEDG 188

Query: 185 ECIIGGIRAPNQIQFITNLSPPEAFYHIASQTKRVWFFKSFSSNKGVITAPLGLNGRLVA 244
           EC+IGGI APN ++FI  LSP EAFY +A ++KRVW +KS  + KGVI  PLGL  R VA
Sbjct: 189 ECLIGGITAPNHMEFIITLSPIEAFYSMAHRSKRVWLYKSMKTTKGVIIFPLGLYYRFVA 248

Query: 245 FFCN 249
           +F N
Sbjct: 249 YFYN 252

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038876014.11.4e-10472.73uncharacterized protein LOC120068348 [Benincasa hispida][more]
XP_008459734.14.4e-9568.13PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo][more]
XP_004146827.28.1e-8963.20uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus] >KGN59826.1 hy... [more]
XP_011652354.14.9e-8662.80uncharacterized protein LOC101206630 isoform X2 [Cucumis sativus][more]
KAE8646781.13.1e-8059.45hypothetical protein Csa_005116, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3CBB92.1e-9568.13uncharacterized protein LOC103498776 OS=Cucumis melo OX=3656 GN=LOC103498776 PE=... [more]
A0A0A0LIF23.9e-8963.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848840 PE=4 SV=1[more]
A0A0A0KFM53.7e-7958.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106730 PE=4 SV=1[more]
A0A5D3DMK76.3e-7960.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1L2R22.5e-7556.56uncharacterized protein LOC111499308 OS=Cucurbita maxima OX=3661 GN=LOC111499308... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.70.10.10coord: 3..223
e-value: 2.5E-5
score: 25.7

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CcUC06G112310CcUC06G112310gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC06G112310.1-exonCcUC06G112310.1-exon-CicolChr06:3305880..3306210exon
CcUC06G112310.1-exonCcUC06G112310.1-exon-CicolChr06:3306300..3306440exon
CcUC06G112310.1-exonCcUC06G112310.1-exon-CicolChr06:3306843..3306916exon
CcUC06G112310.1-exonCcUC06G112310.1-exon-CicolChr06:3306990..3307211exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC06G112310.1-cdsCcUC06G112310.1-cds-CicolChr06:3305880..3306210CDS
CcUC06G112310.1-cdsCcUC06G112310.1-cds-CicolChr06:3306300..3306440CDS
CcUC06G112310.1-cdsCcUC06G112310.1-cds-CicolChr06:3306843..3306916CDS
CcUC06G112310.1-cdsCcUC06G112310.1-cds-CicolChr06:3306990..3307211CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CcUC06G112310.1CcUC06G112310.1-proteinpolypeptide