CcUC05G103930.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC05G103930.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Copper transport protein like
Location	CicolChr05: 31680924 .. 31683121 (-)
Sequence length	747
RNA-Seq Expression	CcUC05G103930.1
Synteny	CcUC05G103930.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCAATTCGGTTGACCCGACCCATCAACACAGAGTCTATTTAAAGCCTCGTGGAAGCCTACAAAACCCATAGCGCAGAGATCGGCGAGGGCGAATTTTCCAATTATTTTTCCTCAGTTTCTCTTCCAAATTTCTATAATCTGTAACCATGTCTCAGGTGCGCTACGAATTTCTCGGTTGTTTGTTCTTCTATGCAATTGTTGAAGTTTCGTTCTCCGTATTTCATCCTTATCTTTTGTTTCATTTCTCTCGCTCGCTCTCTCTCTCTCTCTCTCTCCGTTTTTCGTATGATTTGGAGATCGAAGATGCGTTAGTTCGTTCCTTTTGAACATCAAATCTGCAGTTCGGAGCATGAATCTTTGATTTAAATTGAAGTATAAGGATCGGTTTTGAAACTTTATTCAATCCATAACTTGAATCTGAGATGAGTGACGGAAATTACTGTAACCGAGGCAATGAGGTCAAAGTCTGAGAGAGCTCCATAGAACTATTTCGTTAGTATCGCATATTGACTAATTTATTGGTTAGTAATTGGTTGATTAATTGGAAAAGAAGCTTTATGTTGATCATATATTGATAATTTGGCAATTGATTGAATGTTTTCCCAATTTGCAAGGTTTGAATGTTCTGTCCTATTGTGCGTTTTTGAATTATTAATCTATGTTATTTTGGGAACCGGAGTTGTGGAAAAATCAGTGAGAATATCTATGGATGTAACTCATGGATACAAGTTCCATTAGATAGAACTGATGAGTAAATTTCTATTGAAGAATTTGATAAAGAGCCATTGTTATTAAACACTCTTGTCTTGTCCATTTAAGTGCGTGTGAGATGAGCTAACTTCCATTTCTTGTTATCAGGTAGTCTGTATTCCACCCTCCCCTTCTAGCTGAGTTCTTTGGTTCCATCTTAATAAATACAATTTGGAATTTGTTTTTGTGCAGACTACTGTCCTCAAGGTTGCCATGTCATGTCAAGGCTGTGTTGGGGCCGTCAAAAGGGTCTTGGGAAAACTGGAAGGTTTGTAATTCACTTGCTAAATTTTGGCTGTCTCATGATTCTCTATGCCCTTGTTTTTTATGTGCAATCTTTGCATCGGACTGCGAGGGTCAAGTTTTGGAGTTTCGTATTGCATTTTTGAGATTTATGTTTCAACATTCTAGCTGCTAAATTGGGTTGCTGCCACTTTTTTGTAGTCCAACCAGGTCACAACAGAAAAATGAAACTTAAGAAAATATATACATAAAGTTAAGTTTGTCACACGGCACCATGTGATAGGGTCACAAGACATGTTTAAGTGCAGCCCAGCTAGCAGCCAAGTATTCTTCACTAATATATGACGTTTTGCATTTTGAGAAATGCTGGGCATATTATACTTGACCATGGTTCAATCTCAACAATCATATGCACGCTTGGTTAGTTTTATTGCAAGTTTTGTTCTGTTTTGTGTCTAAGGTTGTCATGGTAATTCAGTGAACTTGAAGATCTGGTGTTATCCATTACCTATGCTCTGTGCTGAATCAAAGGGAATTCTAAATGATGGTTAATGGATGTTAAATCTATCGATATTTCAAAATCAGAGTATCCTTTAGTATAATCTCTCAAACGCTTGCTATTACCCATTGAATGTGAACATTTGAACACTTAACCAGTTCCTTCTCAAAGTTCTTGGCTACCATTTCAGGAGTCGAGACATTTGACATTGATATTGATGCGCAAAAGGTGACTGTGAAAGGCAATGTAGCGCCCGATGTAGTTTTCCAAACTGTTTCAAAAACTGGGAAGAAGACTGCCTACTGGGAAGACGACGCCCCAGCAGCACCTGCAGCGGCTGAAGCAGAAGCTAAACCTGCCGAGACTGTGGCTGCTGCTTAAACTATCCTCCATTTATTCCATGGAAATTTCAATGCATAAGGTCTTTGCTTCCTGAAGCTAATAATATTGTAACAGTACGCAAACTTGTCTATTTAGTCTGTAATATTTTTATTTAAGCGTCTCTTCTGTGACCTTCTACGTTAAAACTTAACTATAGTCTACGGATATATATCTGTTTTGCCCCATTTCTTTGTTCATTTCGACGTTCTATTTCTGCTTTGTTAAAATAAGTATCGATATAATTAAATTTATCGCAACTTGTCAGCTTAAGTTCTTGGGTTGATTGGTAACTCAACAGAAGATGCCTTCAATGGTTCCTCGT

mRNA sequence

TTATCAATTCGGTTGACCCGACCCATCAACACAGAGTCTATTTAAAGCCTCGTGGAAGCCTACAAAACCCATAGCGCAGAGATCGGCGAGGGCGAATTTTCCAATTATTTTTCCTCAGTTTCTCTTCCAAATTTCTATAATCTGTAACCATGTCTCAGACTACTGTCCTCAAGGTTGCCATGTCATGTCAAGGCTGTGTTGGGGCCGTCAAAAGGGTCTTGGGAAAACTGGAAGGAGTCGAGACATTTGACATTGATATTGATGCGCAAAAGGTGACTGTGAAAGGCAATGTAGCGCCCGATGTAGTTTTCCAAACTGTTTCAAAAACTGGGAAGAAGACTGCCTACTGGGAAGACGACGCCCCAGCAGCACCTGCAGCGGCTGAAGCAGAAGCTAAACCTGCCGAGACTGTGGCTGCTGCTTAAACTATCCTCCATTTATTCCATGGAAATTTCAATGCATAAGGTCTTTGCTTCCTGAAGCTAATAATATTGTAACAGTACGCAAACTTGTCTATTTAGTCTGTAATATTTTTATTTAAGCGTCTCTTCTGTGACCTTCTACGTTAAAACTTAACTATAGTCTACGGATATATATCTGTTTTGCCCCATTTCTTTGTTCATTTCGACGTTCTATTTCTGCTTTGTTAAAATAAGTATCGATATAATTAAATTTATCGCAACTTGTCAGCTTAAGTTCTTGGGTTGATTGGTAACTCAACAGAAGATGCCTTCAATGGTTCCTCGT

Coding sequence (CDS)

ATGTCTCAGACTACTGTCCTCAAGGTTGCCATGTCATGTCAAGGCTGTGTTGGGGCCGTCAAAAGGGTCTTGGGAAAACTGGAAGGAGTCGAGACATTTGACATTGATATTGATGCGCAAAAGGTGACTGTGAAAGGCAATGTAGCGCCCGATGTAGTTTTCCAAACTGTTTCAAAAACTGGGAAGAAGACTGCCTACTGGGAAGACGACGCCCCAGCAGCACCTGCAGCGGCTGAAGCAGAAGCTAAACCTGCCGAGACTGTGGCTGCTGCTTAA

Protein sequence

MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKTGKKTAYWEDDAPAAPAAAEAEAKPAETVAAA

Homology

[Close]

BLAST of CcUC05G103930.1 vs. NCBI nr
Match: XP_008446769.1 (PREDICTED: copper transport protein ATX1-like [Cucumis melo] >KAA0034661.1 copper transport protein ATX1-like [Cucumis melo var. makuwa] >TYK09212.1 copper transport protein ATX1-like [Cucumis melo var. makuwa])

HSP 1 Score: 151.0 bits (380), Expect = 5.0e-33
Identity = 85/95 (89.47%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNV  DVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVDTFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDDAPAAPAA----AEAEAKPAETVAAA 92
          GKKTAYWEDDA AAPAA    AEAEAKPAE +AAA
Sbjct: 61 GKKTAYWEDDASAAPAATPAPAEAEAKPAEPLAAA 95

[Close]

BLAST of CcUC05G103930.1 vs. NCBI nr
Match: XP_038893429.1 (copper transport protein ATX1-like [Benincasa hispida])

HSP 1 Score: 149.4 bits (376), Expect = 1.5e-32
Identity = 85/101 (84.16%), Postives = 87/101 (86.14%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVE FDIDIDAQKVTVKGNV  +VVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVEAFDIDIDAQKVTVKGNVEREVVFQTVSKT 60

Query: 61  GKKTAYWEDDAP----------AAPAAAEAEAKPAETVAAA 92
           GKKTAYWE+DAP          AAPA AEAEAKPAETVAAA
Sbjct: 61  GKKTAYWEEDAPAASAKEATPAAAPAPAEAEAKPAETVAAA 101

[Close]

BLAST of CcUC05G103930.1 vs. NCBI nr
Match: XP_004150491.1 (copper transport protein ATX1 [Cucumis sativus] >XP_031745275.1 copper transport protein ATX1-like [Cucumis sativus] >KAE8645958.1 hypothetical protein Csa_018219 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 1.9e-32
Identity = 83/94 (88.30%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVET+DIDIDAQKVTVKGNV  DVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETYDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDDAPAAPAA----AEAEAKPAETVAA 91
          GKKTAYWE+DA AAPAA    AEAEAKPAE +AA
Sbjct: 61 GKKTAYWEEDASAAPAATPAPAEAEAKPAEPLAA 94

[Close]

BLAST of CcUC05G103930.1 vs. NCBI nr
Match: XP_022150677.1 (copper transport protein ATX1 [Momordica charantia])

HSP 1 Score: 144.1 bits (362), Expect = 6.1e-31
Identity = 80/97 (82.47%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVE+FD+DIDAQKVTVKG V PDVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGPDVVFQTVSKT 60

Query: 61 GKKTAYWEDDAP------AAPAAAEAEAKPAETVAAA 92
          GKKT++WE +AP      A PA AEAEAKPAE VAAA
Sbjct: 61 GKKTSFWEAEAPGTAAPEAPPAPAEAEAKPAEPVAAA 97

[Close]

BLAST of CcUC05G103930.1 vs. NCBI nr
Match: KAE8648832.1 (hypothetical protein Csa_008416 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 8.0e-31
Identity = 80/91 (87.91%), Postives = 83/91 (91.21%), Query Frame = 0


Query: 4   TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKTGKK 63
           TTVLKVAMSCQGCVGAVKRVLGKLEGVET+DIDIDAQKVTVKGNV  DVVFQTVSKTGKK
Sbjct: 22  TTVLKVAMSCQGCVGAVKRVLGKLEGVETYDIDIDAQKVTVKGNVERDVVFQTVSKTGKK 81

Query: 64  TAYWEDDAPAAPAA----AEAEAKPAETVAA 91
           TAYWE+DA AAPAA    AEAEAKPAE +AA
Sbjct: 82  TAYWEEDASAAPAATPAPAEAEAKPAEPLAA 112

[Close]

BLAST of CcUC05G103930.1 vs. ExPASy Swiss-Prot
Match: O82089 (Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-25
Identity = 65/88 (73.86%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKT 60
          M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV P+ VFQTVSKT
Sbjct: 1  MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61 GKKTAYWEDDAPAAPAAAEAEAKPAETV 89
          GKKT+YW  +A A P  AEA+ K  ETV
Sbjct: 61 GKKTSYWPVEAEAEP-KAEADPK-VETV 86

[Close]

BLAST of CcUC05G103930.1 vs. ExPASy Swiss-Prot
Match: Q94BT9 (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 5.2e-25
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKT 60
          MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV PD V QTV+KT
Sbjct: 1  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 60

Query: 61 GKKTAYWEDDAPAAPA 77
          GKKTA+WE +   A A
Sbjct: 61 GKKTAFWEAEGETAKA 76

[Close]

BLAST of CcUC05G103930.1 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.1e-10
Identity = 27/64 (42.19%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 4  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKTGKK 63
          T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNV P+++ + + K G+ 
Sbjct: 31 TWVLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRH 90

Query: 64 TAYW 68
             W
Sbjct: 91 AELW 94

[Close]

BLAST of CcUC05G103930.1 vs. ExPASy Swiss-Prot
Match: F4JZL7 (Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX=3702 GN=HIPP33 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-09
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 3  QTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKTGK 62
          QT VLKV + C GC   VK++L K+EGV T  ID +  KVTV GNV P V+ + + K+GK
Sbjct: 10 QTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGK 69

Query: 63 KTAYW 68
              W
Sbjct: 70 HAEIW 74

[Close]

BLAST of CcUC05G103930.1 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-09
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 7  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKTGKKTAY 66
          L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V  + V + V +TG+   Y
Sbjct: 20 LLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEY 79

Query: 67 W 68
          W
Sbjct: 80 W 80

[Close]

BLAST of CcUC05G103930.1 vs. ExPASy TrEMBL
Match: A0A5A7SZ31 (Copper transport protein ATX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002050 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.4e-33
Identity = 85/95 (89.47%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNV  DVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVDTFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDDAPAAPAA----AEAEAKPAETVAAA 92
          GKKTAYWEDDA AAPAA    AEAEAKPAE +AAA
Sbjct: 61 GKKTAYWEDDASAAPAATPAPAEAEAKPAEPLAAA 95

[Close]

BLAST of CcUC05G103930.1 vs. ExPASy TrEMBL
Match: A0A1S3BFW4 (copper transport protein ATX1-like OS=Cucumis melo OX=3656 GN=LOC103489398 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.4e-33
Identity = 85/95 (89.47%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNV  DVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVDTFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDDAPAAPAA----AEAEAKPAETVAAA 92
          GKKTAYWEDDA AAPAA    AEAEAKPAE +AAA
Sbjct: 61 GKKTAYWEDDASAAPAATPAPAEAEAKPAEPLAAA 95

[Close]

BLAST of CcUC05G103930.1 vs. ExPASy TrEMBL
Match: A0A0A0KTF7 (Copper chaperone OS=Cucumis sativus OX=3659 GN=Csa_5G615220 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 9.2e-33
Identity = 83/94 (88.30%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVET+DIDIDAQKVTVKGNV  DVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETYDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDDAPAAPAA----AEAEAKPAETVAA 91
          GKKTAYWE+DA AAPAA    AEAEAKPAE +AA
Sbjct: 61 GKKTAYWEEDASAAPAATPAPAEAEAKPAEPLAA 94

[Close]

BLAST of CcUC05G103930.1 vs. ExPASy TrEMBL
Match: A0A6J1DBD6 (copper transport protein ATX1 OS=Momordica charantia OX=3673 GN=LOC111018750 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.0e-31
Identity = 80/97 (82.47%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVE+FD+DIDAQKVTVKG V PDVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVESFDVDIDAQKVTVKGTVGPDVVFQTVSKT 60

Query: 61 GKKTAYWEDDAP------AAPAAAEAEAKPAETVAAA 92
          GKKT++WE +AP      A PA AEAEAKPAE VAAA
Sbjct: 61 GKKTSFWEAEAPGTAAPEAPPAPAEAEAKPAEPVAAA 97

[Close]

BLAST of CcUC05G103930.1 vs. ExPASy TrEMBL
Match: A0A6J1HTV3 (copper transport protein ATX1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467756 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.9e-30
Identity = 83/108 (76.85%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNV  DVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDDAP---------------AAPAA---AEAEAKPAETVAA 91
           GKKTAYWED+AP               AAPAA   AEAEAKPAE+VAA
Sbjct: 61  GKKTAYWEDEAPAPAPVAAPAAAPAPEAAPAAAPPAEAEAKPAESVAA 108

[Close]

BLAST of CcUC05G103930.1 vs. TAIR 10
Match: AT3G56240.1 (copper chaperone )

HSP 1 Score: 116.7 bits (291), Expect = 9.8e-27
Identity = 65/88 (73.86%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKT 60
          M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV P+ VFQTVSKT
Sbjct: 1  MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61 GKKTAYWEDDAPAAPAAAEAEAKPAETV 89
          GKKT+YW  +A A P  AEA+ K  ETV
Sbjct: 61 GKKTSYWPVEAEAEP-KAEADPK-VETV 86

[Close]

BLAST of CcUC05G103930.1 vs. TAIR 10
Match: AT1G66240.1 (homolog of anti-oxidant 1 )

HSP 1 Score: 114.8 bits (286), Expect = 3.7e-26
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKT 60
           MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV PD V QTV+KT
Sbjct: 31  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 90

Query: 61  GKKTAYWEDDAPAAPA 77
           GKKTA+WE +   A A
Sbjct: 91  GKKTAFWEAEGETAKA 106

[Close]

BLAST of CcUC05G103930.1 vs. TAIR 10
Match: AT1G66240.2 (homolog of anti-oxidant 1 )

HSP 1 Score: 101.3 bits (251), Expect = 4.2e-22
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 11 MSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKTGKKTAYWEDD 70
          M+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV PD V QTV+KTGKKTA+WE +
Sbjct: 1  MTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGKKTAFWEAE 60

Query: 71 APAAPA 77
             A A
Sbjct: 61 GETAKA 66

[Close]

BLAST of CcUC05G103930.1 vs. TAIR 10
Match: AT5G27690.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 5.7e-11
Identity = 27/64 (42.19%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 4  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKTGKK 63
          T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNV P+++ + + K G+ 
Sbjct: 31 TWVLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRH 90

Query: 64 TAYW 68
             W
Sbjct: 91 AELW 94

[Close]

BLAST of CcUC05G103930.1 vs. TAIR 10
Match: AT5G19090.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-10
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 3  QTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVAPDVVFQTVSKTGK 62
          QT VLKV + C GC   VK++L K+EGV T  ID +  KVTV GNV P V+ + + K+GK
Sbjct: 10 QTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGK 69

Query: 63 KTAYW 68
              W
Sbjct: 70 HAEIW 74

The following BLAST results are available for this feature:

BLAST of CcUC05G103930.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446769.1	5.0e-33	89.47	PREDICTED: copper transport protein ATX1-like [Cucumis melo] >KAA0034661.1 coppe...	[more]
XP_038893429.1	1.5e-32	84.16	copper transport protein ATX1-like [Benincasa hispida]	[more]
XP_004150491.1	1.9e-32	88.30	copper transport protein ATX1 [Cucumis sativus] >XP_031745275.1 copper transport...	[more]
XP_022150677.1	6.1e-31	82.47	copper transport protein ATX1 [Momordica charantia]	[more]
KAE8648832.1	8.0e-31	87.91	hypothetical protein Csa_008416 [Cucumis sativus]	[more]

BLAST of CcUC05G103930.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82089	1.4e-25	73.86	Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1	[more]
Q94BT9	5.2e-25	73.68	Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2	[more]
Q84J88	8.1e-10	42.19	Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX...	[more]
F4JZL7	1.8e-09	49.23	Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX...	[more]
B3H6D0	3.1e-09	47.54	Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX...	[more]

BLAST of CcUC05G103930.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SZ31	2.4e-33	89.47	Copper transport protein ATX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BFW4	2.4e-33	89.47	copper transport protein ATX1-like OS=Cucumis melo OX=3656 GN=LOC103489398 PE=4 ...	[more]
A0A0A0KTF7	9.2e-33	88.30	Copper chaperone OS=Cucumis sativus OX=3659 GN=Csa_5G615220 PE=4 SV=1	[more]
A0A6J1DBD6	3.0e-31	82.47	copper transport protein ATX1 OS=Momordica charantia OX=3673 GN=LOC111018750 PE=...	[more]
A0A6J1HTV3	1.9e-30	76.85	copper transport protein ATX1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of CcUC05G103930.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56240.1	9.8e-27	73.86	copper chaperone	[more]
AT1G66240.1	3.7e-26	73.68	homolog of anti-oxidant 1	[more]
AT1G66240.2	4.2e-22	72.73	homolog of anti-oxidant 1	[more]
AT5G27690.1	5.7e-11	42.19	Heavy metal transport/detoxification superfamily protein	[more]
AT5G19090.1	1.3e-10	49.23	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 7..63 e-value: 1.5E-14 score: 54.2
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 3..66 score: 13.709357
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 11..63 e-value: 8.19175E-13 score: 55.6897
None	No IPR available	GENE3D	3.30.70.100		coord: 1..66 e-value: 5.2E-23 score: 83.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..91
None	No IPR available	PANTHER	PTHR22814:SF310	COPPER TRANSPORT PROTEIN CCH	coord: 1..87
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..87
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 2..68

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC05G103930	CcUC05G103930	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC05G103930.1-exon	CcUC05G103930.1-exon-CicolChr05:31680924..31681436	exon
CcUC05G103930.1-exon	CcUC05G103930.1-exon-CicolChr05:31682101..31682176	exon
CcUC05G103930.1-exon	CcUC05G103930.1-exon-CicolChr05:31682964..31683121	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC05G103930.1-three_prime_utr	CcUC05G103930.1-three_prime_utr-CicolChr05:31680924..31681245	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC05G103930.1-cds	CcUC05G103930.1-cds-CicolChr05:31681246..31681436	CDS
CcUC05G103930.1-cds	CcUC05G103930.1-cds-CicolChr05:31682101..31682176	CDS
CcUC05G103930.1-cds	CcUC05G103930.1-cds-CicolChr05:31682964..31682972	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC05G103930.1-five_prime_utr	CcUC05G103930.1-five_prime_utr-CicolChr05:31682973..31683121	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC05G103930.1	CcUC05G103930.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding