CcUC05G093270.1 (mRNA) Watermelon (PI 537277) v1

Overview
NameCcUC05G093270.1
TypemRNA
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr05: 11292226 .. 11297536 (+)
Sequence length609
RNA-Seq ExpressionCcUC05G093270.1
SyntenyCcUC05G093270.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCGAGCTGTCCTCAACGTCCTATATCCTCCTGAAGATAAAGGCCATTTATTACAACAAGTTAATTTCTTTGCTTATTTGTAGAGGAGATATGGGGTTTTACATATCGTATTGCCTCTCTTTGGTTCTTACCTCTAAAGCCTTTTTTTAGTTATCTGTTATCCTTTTGTCCTTGATTAATAACAGCTAGGGCTCCTTCTTTGTAATCTTTTTCTTGTAGTCCCCATGTTGATTGGGCTGGGTTTTTCTATGTGATCCTTTTCATCAGAATGGTAATCCTTGATTAAAATTAATTAAAAAAAAAAAAAAAAGAGAGAAGGTGAATTTCTGCCTCAATTTCTGCAGCCAACATGATACACAAACAACTAGACTACTATATCAAAATCAATGAAAAGATCCAAAACGTTGATCGAGAAATGTTACTAAGAAACAACCAAGAAAATCAGCTTAGCAATGGATTAAAAAACTTTGCTATCACATTAGAAATGCAATTGGGTAAAATGTTGGGACCGTTAAGAAGCCTATTAACCATTGAATGAAAAGCTTGTGAGAGTTGTTATACATAAAGCGGATTACGAGGTTAAGGAGGAGGCATATTTTGGGATTAGTTGTCAGATAGAACTAGACCATTTGAAAGCTTAGAACTTTCACAAAATTGTAATACATTTCAGTCCTTAATCTCAAGATTAGGTTCCTATCAAATTGGCTTAGGAGTACTTATAAGAAAAGCATTGTTTATAATGTTATGTAGGTACTTTAAGTACCTTGGAGAACCACACTCCAAAAGCTAGCTAATGGAGGTGGGAGAGCCAACCACCTAAGTACCACATTGGTCATCCCATTCTAACCAATGTGGGACAAAGGTAGCCAGTACTACCTTGGTTCCTAATAATACTGAAAAGCCGACATCCTGGCAACTACTCCGATAGCACTTCACTCGGCCACACCCGATCAAAACCCTCACAGATTCTACTCCAGAATGTCAACAACCGGCTCCAATACCATTTTTAGGTACTTAAGCACCTTGGAAAACCACACCCCAAAAGCTAGCTATTGAGGTAGGAGAACCAAGCCACTTAAGTACCACATTGGTCATCCCATTCTAATCAATATAGGACAAAGGTAGCCCATACTACCTTGGTTTAAGAGGTTACTAGGGGCATATTAGTTATTGGACGAGGGGTTAGAAATAAAGTGCAAGCGGATGCTTAAGGGGCATATTTTCTACTAAAATTTTAGTTTTAGAAGTCATTATTTCAAAGCTCTGATTTTGCGTATTTATCATTACTTTGTTTTACTAATAGTTATTAAGATGTTTTAGAAAGTGAAAGAAACAAACATACCCATTCAGGACTCCATCCAGTGAACTATTCTTATCTTTAAGGTCATCTAAAAGCTCGGCAATTGAACTCTCAGTATTTCCACAGTTCAGTGCAGGTCCTACATCAAATTGGTCTTCAAATTCTTCCACCAAATCTTCGAGACATTCTGCAGCTGGATGCTTCTCGGTTCTTGATGTAACGGCATCAAAGGTGTCAGATAAATTACGAACCTTGGATACGGATGCTGAGCAGAGTCTATCCTCACAAATAACAGAGCAAGATTGTTCTCTCCTCTGTGAATGAAACGTAAATTTAGGTTTGGTTTTGCCTCTGATTCCTGCAGCAGTAAATTTGATAATCAATATCAATAGAAGTTCACAAATTTGAAGAAAATAGTAACATGTAGAGAAAAATGATCAGCTCATGGAGGATTATCATCATAAATGTTATTTGTAATTGATTGACTCATGCATCCAAAATGGCTTAAATCAAACCAGATAAGAAATGGATTTAATTAACCAATCTTTACAACTGCAAGCAAATTCATTCAACTTTCAGCTAGCATAGTGCTTTTGCCTTTTGGTCTATGAGCATGTGTATCTTTTGATTCAATAAGGGTATGTTTGACCCAAGGAGTTGTGAAGTAGGAATATAGAAGTCCACTCCTTGTTTGGCCCAACTCCTTGGTGGGTCTCACTACTAAAAAACATCAATTTTATATCTTATCACCTCCTTACAGTGTGGGCCCCAAAAGTTGACAACTCCCTAGACTTCATAACTCCTTACTCCTCACTATTCCAATCCTTACCCCTAACACCCCCTAAGAGTTATATTGACCAGTAAGCATGTGTAAGGCGTAAGCTCCGCTCTTTGTTTAATATTTCCCTTGTTCTTTAGAAACATAAAGAAAACATGTGACATAATTCTCTCTCTTCCATTAACAAACACTGGGGACAATGTTTAGTAGTACCCTAAGAAGCAAGATACGAATACAAGACACAGATACGACACAAACACGGTGACACGACATATTTTAAATATGTAGGACACGACATGGCAAGGACACGTTTATTAAAATATACATTTTAAAAAAAATATATATCATTTTCATACCAAAATAAAATTCAATGTAAACGGTTTGATGCATTTATATGCTTAAAAGACTTAGCTTGATGTATTTCAAGCTCAAAGGTTATTACTATTTTCATATGTGTCTTTTTAGTCTACTTAACAAGTGTTCAATGCATGTCTAACACATTTGTTGCACTAACAAGTCTTCGATATGTGTCCAACAAGTATCGGAGTGTCCAACTGTAGGACACTGACACGCCATCCAAACTAAAGTGCCCGTGCTTCTTAGGTAATACCAAATGATCAATCAAATGATTCAATAAGCCAACTATTTAGCACGTACCACTTGAATGGTGGAGTATGGCTTAAATGAAATGGATTGAGAAATATTATTTAAAGAGATACTTTAAAAAAAAAAAATGTTTTTCATAGAAATTACAGAAAGACGGGAAAGCTATGACATCCTCCATGCTGCAAAAAAGACTTTGTGTAGTTTAAGCCTTCTCTAATTGCAGAAAGTGGCTTAAATGAAATGGATTGAGTCTAAGCCTTCTCTAATCACAAGAGAGCTGTGCCTACATGAAAGTGCACTAAAGCTAAGAGTTGTCATGCCTCGTGAAATGGCTAAAATTATATATATCAGTTTACTATTTGTTGTTCAACAATATAAAAGTGCACTTGTGTATTCAAGCCAACACATCAATACTAGCAGTAAAATAGCCGATAACTAGTTTTACGACCACCATCTATACAGACATTGATGACAAAAATTACAAAATATAAGCCAATAATGTTAAGAATCTTTTATAATATTCTTTTTTTTTATAACGTCAAGTGATGCTTGTTTTTACTCTTTCCTTTCTTTTCTTTTTAATGATTTTTCAATGTTCTTCAATTTAAAATCAGGCTTATTCCTCATATCACTTCAAAACTTATGTCTCACCTCTTCAAAGAAAAAAAGCTTCGAGGTGCTTTTAGTCGTTTAAAACATTAATGTGCGGAAACATAATTAAGCCATGGAGACACTCCTATTATAAGTCTTCCTACTCCAGGACCTGTTAACCATCAAAGGTCAAGAAAAAATGAGCTTATAATGCATACGGGAAAAAGTTCCCACAACTAACTAGGAATAAGGTGGTACCTTTGTCTGAGTTGCAGACTTCAGAGTATGCTATATGGTATGAAGAACGGGAACCGCTGTTATTCAGAACCTTAACCACCTTGGTTTCTTTGTTTACATTAAACCATGAGCATACACCATTTTGCCTTTTACTTGCACAACCAGGAGGGCTATCTTCATTTAACCTTTTGGTACCAGAGGCAGGGGAGAGTTCGAGAGAACATTGCTTGCCTTGCCAAAGATATAAAAACCAATATAATTTTAAATTAAAGGAGAAGAATGCTAGAAAAGGCCACTCACAAAGCCCTTAACCACTCCCTTTAGAAAAACTGAAGAAGTATAATTGAATATTACAGTGAGGCAATTAATGAAAGATATGAAAAGTGGCTGATTGATAAATTATCAGTACAAGACCTTTAGAAGCTACCTCCCGGTCACAAAAAGAGGCAAGATGATGAAAAGTAACAAAAACTCATTTTCCAGTTCAAAGTTACAGGACATTGTCTTGTAACAGGATACAGAAAAGATACTTCACCTTTGAGCCTTTCCAGTCTTAAATTGAGCTGAAGTTCTTCCTAGTAAAGTGTAAGGAAATATGAGTCAAATAAGATCAATTTGGGACAAGGAAAAAAAATAATTCAACCTCAAAAGAAAAAATCACATCTAAGAATGGACAAGACCATGTATTGGAAAAACAAAAAATGGGAGGAAAACTAAAAAATGTAAACCTACTTCCGGAAGTAAGATAGTTCGGACGTTATTCTCAAATAAATTAGGCAAGACTAAGAGAGAAGACCATTTCAATGCTTGAAAGTATCATTTGTGATTTTATGATTGTATAAGCAAAAAACAACTTCAATAATCTTTAAGGAAAAAATAGGTTTCCGTGAAAACAACTAAAAAGGCACTCATCCAAACCTGTTTTCACTCACTTCTTACAATACTTGTTTTTTTTCCTGATTTTTATTTGAATAGCAGAAACTGTTTTCAAACCACTTCCAGATAGCCACTAGCATTTATTTCAAAGTTTATTTCGCGAGGTAATAAATATTTCATTTAAGACAGTTGAAGAATAAGTTCAAAACTTGCACGTAATTGATAGAAAAAGCAAACAAAAATTAATTAATGCCTCGTTTCGTAACCTTTAGATTTTTCATTCTTGAAAATTAAGCTTAAAACACTGCATGCTTTCTTTGTTTTGTTTATTAAGAGTGTTTTAAAAAACCGGATGTGGCTTAGAATTCAAATGTTTAGTATTCAAAGCAAGCTGAAAGAAAACAAACATAATTTTCAAGAACACAAAACTAATGTAATATAGCACTAACACTAGTTATTTTTAAAAAATACAAAAATAAAAGCCCTAAATATCGTCGTTAAAGACAAAACGTTGAGTTATAAAACCCCAAGAACAAGATTAAGGGTAAACAAGGTGATTAGAGAGAACGAGATACAAACCTTTTGCTCCGTAGTTCCTTCAATTGAATCAAAGTCATCGCCCTCTGTAGCGATCAGATTAGGAAACAAAGCCAAGAAATTAATCATCACCCTAGGAGGGAGGAAAAAGAAAGTCTAATAACCGAGGTAAAGGAAGTACCGGAAACATCGCAGTCAGAGTCTGCATTCGCCTGCATTTCCCTCCTGAAACAACTGGTCATCAGCGTTCGCAACCGGAATATTGAACAAACAAGAAATTTCAATGTTGAAGGCGATGCATAGGCAATGGATTGGAGCTTTTCAGCGCCACTGGGACGAGAATTTTCCAGGGAGAGGGTTTCATTTCTCGCTGAATCATGATGCC

mRNA sequence

GTTCGAGCTGTCCTCAACGTCCTATATCCTCCTGAAGATAAAGGCCATTTATTACAACAAAAACAAACATACCCATTCAGGACTCCATCCAGTGAACTATTCTTATCTTTAAGGTCATCTAAAAGCTCGGCAATTGAACTCTCAGTATTTCCACAGTTCAGTGCAGGTCCTACATCAAATTGGTCTTCAAATTCTTCCACCAAATCTTCGAGACATTCTGCAGCTGGATGCTTCTCGGTTCTTGATGTAACGGCATCAAAGAAACTGTTTTCAAACCACTTCCAGATAGCCACTAGCATTTATTTCAAAGTTTATTTCGCGAGCGATCAGATTAGGAAACAAAGCCAAGAAATTAATCATCACCCTAGGAGGGAGGAAAAAGAAAGTCTAATAACCGAGGTAAAGGAAGTACCGGAAACATCGCAGTCAGAGTCTGCATTCGCCTGCATTTCCCTCCTGAAACAACTGGTCATCAGCGTTCGCAACCGGAATATTGAACAAACAAGAAATTTCAATGCGATGCATAGGCAATGGATTGGAGCTTTTCAGCGCCACTGGGACGAGAATTTTCCAGGGAGAGGGTTTCATTTCTCGCTGAATCATGATGCC

Coding sequence (CDS)

GTTCGAGCTGTCCTCAACGTCCTATATCCTCCTGAAGATAAAGGCCATTTATTACAACAAAAACAAACATACCCATTCAGGACTCCATCCAGTGAACTATTCTTATCTTTAAGGTCATCTAAAAGCTCGGCAATTGAACTCTCAGTATTTCCACAGTTCAGTGCAGGTCCTACATCAAATTGGTCTTCAAATTCTTCCACCAAATCTTCGAGACATTCTGCAGCTGGATGCTTCTCGGTTCTTGATGTAACGGCATCAAAGAAACTGTTTTCAAACCACTTCCAGATAGCCACTAGCATTTATTTCAAAGTTTATTTCGCGAGCGATCAGATTAGGAAACAAAGCCAAGAAATTAATCATCACCCTAGGAGGGAGGAAAAAGAAAGTCTAATAACCGAGGTAAAGGAAGTACCGGAAACATCGCAGTCAGAGTCTGCATTCGCCTGCATTTCCCTCCTGAAACAACTGGTCATCAGCGTTCGCAACCGGAATATTGAACAAACAAGAAATTTCAATGCGATGCATAGGCAATGGATTGGAGCTTTTCAGCGCCACTGGGACGAGAATTTTCCAGGGAGAGGGTTTCATTTCTCGCTGAATCATGATGCC

Protein sequence

VRAVLNVLYPPEDKGHLLQQKQTYPFRTPSSELFLSLRSSKSSAIELSVFPQFSAGPTSNWSSNSSTKSSRHSAAGCFSVLDVTASKKLFSNHFQIATSIYFKVYFASDQIRKQSQEINHHPRREEKESLITEVKEVPETSQSESAFACISLLKQLVISVRNRNIEQTRNFNAMHRQWIGAFQRHWDENFPGRGFHFSLNHDA
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CcUC05G093270CcUC05G093270gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC05G093270.1-exonCcUC05G093270.1-exon-CicolChr05:11292226..11292285exon
CcUC05G093270.1-exonCcUC05G093270.1-exon-CicolChr05:11293557..11293757exon
CcUC05G093270.1-exonCcUC05G093270.1-exon-CicolChr05:11296717..11296778exon
CcUC05G093270.1-exonCcUC05G093270.1-exon-CicolChr05:11297244..11297436exon
CcUC05G093270.1-exonCcUC05G093270.1-exon-CicolChr05:11297444..11297536exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC05G093270.1-cdsCcUC05G093270.1-cds-CicolChr05:11292226..11292285CDS
CcUC05G093270.1-cdsCcUC05G093270.1-cds-CicolChr05:11293557..11293757CDS
CcUC05G093270.1-cdsCcUC05G093270.1-cds-CicolChr05:11296717..11296778CDS
CcUC05G093270.1-cdsCcUC05G093270.1-cds-CicolChr05:11297244..11297436CDS
CcUC05G093270.1-cdsCcUC05G093270.1-cds-CicolChr05:11297444..11297536CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CcUC05G093270.1CcUC05G093270.1-proteinpolypeptide