CcUC04G065080.1 (mRNA) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTCTATATAGAAGAATTAGAAGGTCGGGCAACACAAATGGCAACGCAACAGGAAAGATCAGAGCTCGACGCTAAAGCAAAGCAGGGTGAGACTGTGGTTCCTGGCGGAACCGGCGGCAAAAGCTTTGAAGCTCAAGAACGTCTCGCTGAAGGTGTTCTTAACTGTCTCTCAATTAATTGTTAATGTACTATATATTTCTGCTCTAATAACACAATACAGTAGAAAACATTTTCAAATATTTCTTGAGGAAAACTTAGATTTTATCTTTGTCCAACAAAGAAAAAAACTTTCATGTGATAATTCTTTTTCAAAAAAATGATTTTTTTAGAGTTTTGTTAACTCGTTTGTTTCTTGGGTCGTGGCGACATGGAGGTCGGAGTCGGGGTGGGCAGACGAGGAAAGAGCAATTGGGGCATGAAGGGTATCAGGAGCTAGGGCACCAGGGAGGAGAGGCAAGAAGGGAGCAGATGGGCCATGAAGGCTACCAAGAAATGGGTCGTAAAGGAGGGCTGAGCACCATGGACAAGTCCGGTGGTGAGCGGGCAGCGGAGGAAGGAATCGAGATCGACGAGTCCAAGTTCAGGACCAAGGACCGTTGATCAGAGCTTATGGCTCTGTGTGCATACCAGATGATGATCCAGCTGACTTTGTTTTGAAAGTAGCTGTGTGGCGTGTTCTTGTCGTGTTTTTTTTTTTTCCCCCCCCCTTCATGTTTATGTATTTTGGTAAGGTTGCTTTGTAATAGCTAATGTCTTTTTAAGTCTGTTTTTCTTTCCGTTTCTGGCCACATGTACGTCGGCACGTCAGGGTTTTGGTTATTGGACTTGAACAAGGAGAAACTTTGCTTTATTATGTGAATTTTAGATGTCTTATTTTATTTGCATAGAAAAAGGAAAGGACCTTGGCCAACTTTAATTCGCATTGCCATGAACACTCTCCCTATTCTCAATGGGTTAAGATGGAAATTTCATGTTTCTCTTTCCAGATCCAATTTGTGCTTAGCTAAGTTCATAGTGAAGATAAAGAAACTGGAACAAACTAACTTTGCTTTATTATGTGAATTTTAGATGTCTTATTTTATTTGCATAGAAAAAGGAAAGGATCTTGGCCAACTTTAATTCGCATTGCCATGAACACTCCCCCTATTCTCAATGGGTTAAGATGGAAATTTCATGTTTCTCTTTCCAGATCAAATTTGTGCTTAGTTAAGTTCACTATGTGAAGATAAAGCAAACTAACTCATAATTGTTTCAATTAAATGTTAGAACTAATGTGAGTTTGATTCTGAAATTGAAATTTAGGGCGGAGTGTAAATTAATATGATATATCCTATTAGACAATGGAGATATGATATATCCTATTAGACAATGGGAGATTATGCAAGATTTTCTAGAGTTTGACCCACTCGAATTAAAAGTTTTATCAACGAAATTAAGGAAATACACAAAAAAATTAAAAGAATTTAGAAGATAATTAGGAGTTTATATTTAGGGGTGACTTAATATTTTTTCTAAAAATATAAAAAGAATGAAGTTCGACATCAATTTTCATCTTTCATTTAGTGAAGAAGTTCAAATAAGAATTTTGTACGATTTAATTTTGAAATAAGAAAACGAAATTACAAATGCGCTTCCAACTTATGTTTGGGGTTTAAAATCAAAATGAGTAGGTTTAAACTGATTCTTTTTAAATATTTCAATATTTCTTAAGATATCAAGGAAGAGCTAATGCTTTGTTTGACATTTTACCATGATACCTTACTGGATGAAAACTTGAAGTTGGACTACTATGATGACATCAGAATCACTCCCCATTTGATCCCAACTTCTAATTAGACATTAGGTAAGCACTTTTGGTCCAATAAAAGTAAATATTAAATTAAACCATTATCAGCAAAGGTTCTAAGCCTAAATTGTTATTTCAAATAGAAAGATAAAAACTACTTTTTAACTGATTTTAAAATAGCTATGAGCCAATAATCTAATGACAAAATTTTAGCATTTTGTTCCCACTATAAATTTGTGTTAGTAAATTGAGCACTTAAATATTCATCGTGCTGAATATTTTAAGGGTTCTTGATTTTTGTTTTTCATGGTTTAGAAAACTAAATCTAAAGCTGGGGTTTAAATTTCTAGTCAAAATATTATATTGGTATCTAACTGGTCAAAATTTCAATCCCAACGTCGAATTTTAATCTATATCCTTAGACTTATTTTGAAACAACTTTGTCATACATATTTATTTATTTTATTTTCTGAAAATTATTGTTATCATTATTATTTAATCGGTTTTGGTAAAAGTCAGTTTCAGGAATTAAAACTGGACTAAAATGGAATAAACTGGGACTGAAATGGTATTTGACCTAAAATTTTCTACCTTATCGTAGTACTGGACCTAAATTTTTCTACCTTATCGTTGTACTGTTGATAGAAGGGAATCAGATCTTAGAACCGCTATCTCGTCTCAACACGTGTCACCTGTGGGACACTAGAAGAAACTTTTTGACTGAGTAAGCACCTACGTGTCACCCAAGCAATGTTCTACAATTCGTTATCAGCCACGCAGGCACTCCAGAGTTGGGAATAAGAGTTCTCAAATTCTATATAAACCCAAAGGGACAAGAAGAGACAGGCATAAAACTCTTATCTTCTCTTGTCGAAGCTAAGTATTTGGAAGAGTTGAAGAAAGAGATGTCGTCTGAGCAAGAAAGATGTGAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTTGTCCCCGGTGGAACTGGGGGTAAGAGTCTCGAAGCTCAGGAGCACCTTGCTGAAGGTGTGACGACTTGTCGACTTTTCTAGTTTCCAACCCTATTGTTCCATTTTAAACTTACCTTTTCTTAGTTAAAAAGCACTTTTTAACTAAATTTAACCATTTGAATCCTTTAGCTCTGGTACTTAATTATTTAAGTCTTAATACTTTTTAACTCGATATAATATAAATCAAAATGAAGTGTCGCTACTATAAAACAAGGTTTATTATTCAACAAATTTAATAAATTTCATTTGGTATCTAAAATTTTTAAAATGGTTAAATTAAAATTCTAGTCTCTAATTATTTTTATCTCGTTGATTCGAGACCTGACCGAACTTCAAATCTTGTGTCTGAAGTCTCTACTTCTAATTTTCTATATTTAATAAGGCTATGATATATGCAACTTTTTTTCTTTTCTTTTCTTTTAAAAAAACTAGGAAAGGGATAGTTTAAAAAAAAAAAAAAAAAGGAAAGGGATAGTTTAAAAAAAAAAAAAAAAAGGAAAGGGATAGTTTAAAAAAAAAAAAAAAAAGGAAAGGGATAGTTTAAAAAAAAAAAAAAAAAGGAAAGGGATAGTTTAAAAAAAAAAAAAAAAAGGAAAGGGATAGTTTAAAAAAAAAAAAAAAAAGGAAAGGGATAGTTTAAAAAAAAAAAAAAAAAGGAAAGGGATAGTTTAAAAAAAAAAAAAAAAAGGAAAGGGATAGTTTAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAGAACTTATAGGAAAGAGGTAGTTTTAAAAAATATAACAAAATCCGTGTAGCGAAATGTTTAATAAATATAGTTAAATTAGACTCCTATCATTCATGACCGACTACTACGGATAAGTCGACTACTATTTACTTAGAATTATTGCCAGAAAAAGAATTGCTATATTTTAAAATATTTTAAGCAATTTTGTTATTTAAAACAATTATTTAAAAAAAATATATTATATTTGATAATTTTTTAAGTAAATTTTAGTTAATAATTGATCTATTAGACATACTCTAAAAATTTTATGTCTTATAAGATACAATACTACAGAAAATTTTATAAGACTGAAAATTGGAACTAATTTATAGGATAAACTTTTAAGAAAATTATTATAAATTGAAAAGACATCCCAAAACTTTTAATTTAATCTTTAAAAATATCTCTAAATAGCATAGAGACCACGTAAAACACTCTTGAAAGTACTAATGTTGGGGCCATTTTAAACCCAAGCCAACCGCCAAAGTGGAAAGTGGTGACTCATTCTGATGGTGATGCAGGGCGGAGCCGTGGGGGCCAGACAAGGAAGGAGCAGCTAGGACACGAAGGGTACCAAGAGATGGGCCGTAAAGGAGGGCTAAGCAACACGGGTATGCCAGGAGGAGAGCGTGCTGCTGAGGAAGGGGTTGAAATTGACGAATCCAAGTTCAGGACTAAGTAGAAGAAAGCCTTTCACAATGTCGTTGAGTTTCAAGTTCTAAGTTCCATTTTCAGCTTT GTTTCTATATAGAAGAATTAGAAGGTCGGGCAACACAAATGGCAACGCAACAGGAAAGATCAGAGCTCGACGCTAAAGCAAAGCAGGGTGAGACTGTGGTTCCTGGCGGAACCGGCGGCAAAAGCTTTGAAGCTCAAGAACGTCTCGCTGAAGGTCGGAGTCGGGGTGGGCAGACGAGGAAAGAGCAATTGGGGCATGAAGGGTATCAGGAGCTAGGGCACCAGGGAGGAGAGGCAAGAAGGGAGCAGATGGGCCATGAAGGCTACCAAGAAATGGGTCGTAAAGGAGGGCTGAGCACCATGGACAAGTCCGGTGGTGAGCGGGCAGCGGAGGAAGGAATCGAGATCGACGAGTCCAAGTTCAGGACCAAGGACCCTAAGTATTTGGAAGAGTTGAAGAAAGAGATGTCGTCTGAGCAAGAAAGATGTGAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTTGTCCCCGGTGGAACTGGGGGTAAGAGTCTCGAAGCTCAGGAGCACCTTGCTGAAGGGCGGAGCCGTGGGGGCCAGACAAGGAAGGAGCAGCTAGGACACGAAGGGTACCAAGAGATGGGCCGTAAAGGAGGGCTAAGCAACACGGGTATGCCAGGAGGAGAGCGTGCTGCTGAGGAAGGGGTTGAAATTGACGAATCCAAGTTCAGGACTAAGTAGAAGAAAGCCTTTCACAATGTCGTTGAGTTTCAAGTTCTAAGTTCCATTTTCAGCTTT ATGGCAACGCAACAGGAAAGATCAGAGCTCGACGCTAAAGCAAAGCAGGGTGAGACTGTGGTTCCTGGCGGAACCGGCGGCAAAAGCTTTGAAGCTCAAGAACGTCTCGCTGAAGGTCGGAGTCGGGGTGGGCAGACGAGGAAAGAGCAATTGGGGCATGAAGGGTATCAGGAGCTAGGGCACCAGGGAGGAGAGGCAAGAAGGGAGCAGATGGGCCATGAAGGCTACCAAGAAATGGGTCGTAAAGGAGGGCTGAGCACCATGGACAAGTCCGGTGGTGAGCGGGCAGCGGAGGAAGGAATCGAGATCGACGAGTCCAAGTTCAGGACCAAGGACCCTAAGTATTTGGAAGAGTTGAAGAAAGAGATGTCGTCTGAGCAAGAAAGATGTGAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTTGTCCCCGGTGGAACTGGGGGTAAGAGTCTCGAAGCTCAGGAGCACCTTGCTGAAGGGCGGAGCCGTGGGGGCCAGACAAGGAAGGAGCAGCTAGGACACGAAGGGTACCAAGAGATGGGCCGTAAAGGAGGGCTAAGCAACACGGGTATGCCAGGAGGAGAGCGTGCTGCTGAGGAAGGGGTTGAAATTGACGAATCCAAGTTCAGGACTAAGTAG MATQQERSELDAKAKQGETVVPGGTGGKSFEAQERLAEGRSRGGQTRKEQLGHEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTMDKSGGERAAEEGIEIDESKFRTKDPKYLEELKKEMSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFRTK Homology
BLAST of CcUC04G065080.1 vs. NCBI nr
Match: KAG7033764.1 (Em-like protein GEA1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 326.2 bits (835), Expect = 2.0e-85 Identity = 181/213 (84.98%), Postives = 188/213 (88.26%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. NCBI nr
Match: KAF4401425.1 (hypothetical protein G4B88_001619 [Cannabis sativa]) HSP 1 Score: 265.4 bits (677), Expect = 4.3e-67 Identity = 159/271 (58.67%), Postives = 178/271 (65.68%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. NCBI nr
Match: XP_016183975.2 (LOW QUALITY PROTEIN: late embryogenesis abundant protein B19.4 [Arachis ipaensis]) HSP 1 Score: 249.2 bits (635), Expect = 3.2e-62 Identity = 152/233 (65.24%), Postives = 167/233 (71.67%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. NCBI nr
Match: XP_007206180.2 (late embryogenesis abundant protein B19.3 [Prunus persica]) HSP 1 Score: 235.7 bits (600), Expect = 3.6e-58 Identity = 143/235 (60.85%), Postives = 161/235 (68.51%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. NCBI nr
Match: XP_021296037.1 (late embryogenesis abundant protein B19.4 [Herrania umbratica]) HSP 1 Score: 217.2 bits (552), Expect = 1.3e-52 Identity = 135/225 (60.00%), Postives = 157/225 (69.78%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. ExPASy Swiss-Prot
Match: Q07187 (Em-like protein GEA1 OS=Arabidopsis thaliana OX=3702 GN=EM1 PE=2 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 7.6e-43 Identity = 111/214 (51.87%), Postives = 125/214 (58.41%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. ExPASy Swiss-Prot
Match: Q05191 (Late embryogenesis abundant protein B19.4 OS=Hordeum vulgare OX=4513 GN=B19.4 PE=2 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 9.3e-41 Identity = 104/210 (49.52%), Postives = 123/210 (58.57%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. ExPASy Swiss-Prot
Match: I1N2Z5 (Protein SLE1 OS=Glycine max OX=3847 GN=SLE1 PE=2 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 3.9e-39 Identity = 87/106 (82.08%), Postives = 94/106 (88.68%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. ExPASy Swiss-Prot
Match: Q5KTS7 (Carrot ABA-induced in somatic embryos 3 OS=Daucus carota OX=4039 GN=CAISE3 PE=2 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 8.7e-39 Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. ExPASy Swiss-Prot
Match: Q02400 (Late embryogenesis abundant protein B19.3 OS=Hordeum vulgare OX=4513 GN=B19.3 PE=2 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 2.8e-37 Identity = 88/128 (68.75%), Postives = 99/128 (77.34%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. ExPASy TrEMBL
Match: A0A7J6I2G2 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_001619 PE=3 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 2.1e-67 Identity = 159/271 (58.67%), Postives = 178/271 (65.68%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. ExPASy TrEMBL
Match: A0A6J1B9A4 (late embryogenesis abundant protein B19.4 OS=Herrania umbratica OX=108875 GN=LOC110425442 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 6.5e-53 Identity = 135/225 (60.00%), Postives = 157/225 (69.78%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. ExPASy TrEMBL
Match: A0A498K5A7 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_014793 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 6.9e-47 Identity = 132/269 (49.07%), Postives = 150/269 (55.76%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. ExPASy TrEMBL
Match: A0A446J0E8 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_1Av1G143760 PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 2.6e-46 Identity = 116/210 (55.24%), Postives = 133/210 (63.33%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. ExPASy TrEMBL
Match: R0HE60 (Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10019332mg PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 2.9e-45 Identity = 123/215 (57.21%), Postives = 145/215 (67.44%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. TAIR 10
Match: AT3G51810.1 (Stress induced protein ) HSP 1 Score: 175.3 bits (443), Expect = 5.4e-44 Identity = 111/214 (51.87%), Postives = 125/214 (58.41%), Query Frame = 0
BLAST of CcUC04G065080.1 vs. TAIR 10
Match: AT2G40170.1 (Stress induced protein ) HSP 1 Score: 141.0 bits (354), Expect = 1.1e-33 Identity = 73/91 (80.22%), Postives = 81/91 (89.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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