CcUC04G062500.1 (mRNA) Watermelon (PI 537277) v1

Overview
NameCcUC04G062500.1
TypemRNA
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr04: 15937158 .. 15937934 (+)
Sequence length234
RNA-Seq ExpressionCcUC04G062500.1
SyntenyCcUC04G062500.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCTAATGACTGCGAAACAATTAAAAAGGTGCTTTGGGAATATGAGGCTGCTTTGGAACAAATGATTAATCTAGATAAGTCAAACTTCATGGTTAGCAAGAACGTGAGCCCCAAAAAATCTGTAATGATTAGCTAAGTTTAAGGTATCAAGTCTACGGAAAACCTGGTTGATTACTTGAGAATGTAGTTTCAATCGGAACAAAACAAACACATTATGTTTCAGAAGATCAAAGAAAGAGTTTGGAAAGTGTTGTAGAGCTAGAAAGAAAGGCTTTTTTTGATGGGTGGCAAAGGATCCTGCTTAAGTCCATTGCTCGGGCAATCCCCACCCACACCATGAGCTGTTTTAGGCTTCCCATCAAGACATGAGATGAACTTAATAGATTGGGTGCTCGCTTTGGTGGGGTTGAGATCATTTGGAATTATATATGGTTCTAAAGGTCGCTTCTAGGTCAAAATTACCTATCACCTTGCTCCGTCTCTAGATGGCTATAAAGAGGCTTCGTCTTCTTTCGGAAGTGCTTTGGAAAGTGAAATTACTCCCTAGGAGCCAAGCATTGTGTCTGAAAAATCATTCAAGATATCATTCCAAACGAAGTCAATATTATTTAAAAAGAGGTTCAATTCTAACCCTCTATGTTTATAGGGTGTTGTTACTTGCGTAGGGGTGATTAGTCGCCTTTGGCTTATTGGGGGTGGATTGTTGAAAAGCTTGAAGTTGAGGACCTTACTAAAGTCATTACTATTTTGTGGTGCATCTAAAGCTATATAA

mRNA sequence

ATGGCCTCTAATGACTGCGAAACAATTAAAAAGGTGCTTTGGGAATATGAGGCTGCTTTGGAACAAATGATTAATCTAGATAAGTCAAACTTCATGGTTAGCAAGAACGGTGTTGTTACTTGCGTAGGGGTGATTAGTCGCCTTTGGCTTATTGGGGGTGGATTGTTGAAAAGCTTGAAGTTGAGGACCTTACTAAAGTCATTACTATTTTGTGGTGCATCTAAAGCTATATAA

Coding sequence (CDS)

ATGGCCTCTAATGACTGCGAAACAATTAAAAAGGTGCTTTGGGAATATGAGGCTGCTTTGGAACAAATGATTAATCTAGATAAGTCAAACTTCATGGTTAGCAAGAACGGTGTTGTTACTTGCGTAGGGGTGATTAGTCGCCTTTGGCTTATTGGGGGTGGATTGTTGAAAAGCTTGAAGTTGAGGACCTTACTAAAGTCATTACTATTTTGTGGTGCATCTAAAGCTATATAA

Protein sequence

MASNDCETIKKVLWEYEAALEQMINLDKSNFMVSKNGVVTCVGVISRLWLIGGGLLKSLKLRTLLKSLLFCGASKAI
Homology
The following BLAST results are available for this feature:
BLAST of CcUC04G062500.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC04G062500.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC04G062500.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC04G062500.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CcUC04G062500CcUC04G062500gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC04G062500.1-exonCcUC04G062500.1-exon-CicolChr04:15937158..15937265exon
CcUC04G062500.1-exonCcUC04G062500.1-exon-CicolChr04:15937809..15937934exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC04G062500.1-cdsCcUC04G062500.1-cds-CicolChr04:15937158..15937265CDS
CcUC04G062500.1-cdsCcUC04G062500.1-cds-CicolChr04:15937809..15937934CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CcUC04G062500.1CcUC04G062500.1-proteinpolypeptide