CcUC01G009280.1 (mRNA) Watermelon (PI 537277) v1

Overview
NameCcUC01G009280.1
TypemRNA
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCicolChr01: 10687454 .. 10689932 (+)
Sequence length1887
RNA-Seq ExpressionCcUC01G009280.1
SyntenyCcUC01G009280.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGCTCATAAAATTTCCATAAATATTCTTCAGTTCCTCGAATTTCTCTAATTCATGGCATTATTTCGCCAAAAACTGTCATCCTTTGTTTTCTCATCATCCAGAAATTCTCTTTGCTTATCCATACGAAAACTCATCTCAGTTGCAGTTGCAGATGAAATTATCAACGACGACGCAACTGTCAATTCCATATGCGATTCATTCACAAGACGCGAAACCTGGGACACTCTTTCTCGAAAATTCCAGTTGCTCCAACTTAACGACTACTTGGTTCAAAAAGTCCTGCTCAAATTCCAGCAACCCGTTGATGCCAAACGCGCTCTGGGGTTCTTCCACTGGTCCGCCAAGAGCAAGAATTTCAATCATGGATCTCAATCGTACGGTATTATGATTCATATTTTAGTGAAAGCGCGGCTGGTAATCGATGCTCGAGCTTTGCTCGAGTCAATTTTGAAAAAAAATGAGGGGAACTCTTTTGACTTCTCGGTTGTAGATTCGCTTTTGGATTCCTATGAGGTGACTGGTTCATCCCCATTTGTGTTCGATTTATTGATTCAGACTTGTGCAAAATTGAGATTGATTGATTTTGCTTTGTGTGTTTGTTCTCATTTGGAGGAACGTGGGTTCTCGTTAAGTCTGATAAGTTTCAACACTTTGATTCATGTTGTGGAAAAATCTGATGAGAATCATAAGGTTTGGAAAATTTATGAGCAAATGATCCGGAAAAGAGTTTACCCAAATGCAATTACTGTTAGAATCATGATTAATTCGTTATGTAAGGAAGGTAAATTGCAAGAAACTTCTGATATGTTGAATAGAATCCGTGGCAGTCGTTGCTCTGCTTCTTTGATTGTCAATACTTGTTTGATTTACAGGATTTTGGAGGAGGGAAGAGTTGAAGAAGGTGTAATGTTGTTGAAGAGAATGTTGCAGAAAAATATGGTTCTTGACGACATTGCTTATTCACTGATTGTTTATGCTAAAGTGAAAACTGGGAGTATAACATCTGCATGGGAAGTGTTTGAGGAAATGTCTAAAAGAGGGTTTCGGGCAAATTCTTTCCTTTATACATTGTTCATTGGTGTCCATTGTAGAGGGGGAAAGATTGAGGAAGCTAATTGCTTAATGCAAGAGATGGAAAACATGGGTCTGAAGCCATATCCGGAGACCTTTAATCTTCTCATTGAAGGGTGTGCTACGTCAGGACATTCAGAAGAAAGCTTGAGAATGTGTGAGAAAATGTTAGATAGAGGGTTTCTTCCTAGTTGTTCAGTTTTCAACATGGCAATAGCTAAGATTTGTGAGGAAGGAGCTTTGAAAAATGCTAATGCATTGTTAACCATGTTATTAGATAAAGGGTTTTTACCTGATGAAACCACTTACACCAATCTGATCTTAGGATATAGGAAAAGTGGTGAAATTCAGGAGATTCTTAAGCTTTACTATGAAATGGAAGCTAGATTGCTGTCTCCTGGAGTGTCAGTTTTCTTTGTACTCATTGGGAGCCTTTGTCAATCTGGGAAATTGGAGGAAGCAGAGAAATATTGGAAGATTATGAAAGATAGCTCTATAACACCTAGTCTACCTATATATCAGACATTAACCTTGTTCTACTTGAAGAAGGGTAATAGAGAAAAAGCTCTAGAACTGTATAAAGAGATGATGTCCAATGGATAGAAGATTATCTGTTTCTAAGCATGTGCATGTTTCAACATGGAACTGAAACGTTCATATACACTCTCTTCTCTGGCAGGTTACGTTCAAAGAAGCAACTCAAATGAAAGGTGATTATTGGTGCCCTGCCTTTAATTTATTTTATCTACTTAATTTCACTAAGAAAGAAAGCAGAGCTCTTCTAAATTCAATAGTTAAAAATCAATTATCGGCTGTTTATTTAGCCTAGCCTTTATATGATAAGAAAGGGGTCAATTTAAGTGGAACTTTATCTTCAAAAAACAGGGCCTATGGTTTCTGTTGGCCGTTTTTGCTAATGAGTTTACTTATCTACATTTTTAATCTGTATATGAATGGATCAAGAAGGCTTAGAAGTTTGATATCTGATAACATATGAGTACACTTTGTGACAGGTAGCGTTGATCAAGGTAATTTCATGCGACTGCTCATTCTCAGGATTCACTTGCGGAGGTTGACCTTCAGTTCAAATGGTGCAATCTGGTGGGGTAATCGTTCCATCAATATACTTGAACAACTTGTGAGCCTCAAGGATCGGAGAAATCTGGAAGTTCCGAAGAACATGTTAGACAAATCAAGATGAACAGCTACGAGATTGCAAATGTTCATGAGAAGAAAATTACATTGAGGAGTTTTGAGAATTCTGTTGATCCGCCATCACTAGCAAGCTTCAGCGCAAAAGACGAATTTGGGATGCTTGGCGAAAAGAAAAATGTGAGTCTTACTAACTCTGATAGCATAGAGATGCTCAGAAAATTGATAATTTCTCCTCTCATTTATTAG

mRNA sequence

ATGGATGAAATTATCAACGACGACGCAACTGTCAATTCCATATGCGATTCATTCACAAGACGCGAAACCTGGGACACTCTTTCTCGAAAATTCCAGTTGCTCCAACTTAACGACTACTTGGTTCAAAAAGTCCTGCTCAAATTCCAGCAACCCGTTGATGCCAAACGCGCTCTGGGGTTCTTCCACTGGTCCGCCAAGAGCAAGAATTTCAATCATGGATCTCAATCGTACGGTATTATGATTCATATTTTAGTGAAAGCGCGGCTGGTAATCGATGCTCGAGCTTTGCTCGAGTCAATTTTGAAAAAAAATGAGGGGAACTCTTTTGACTTCTCGGTTGTAGATTCGCTTTTGGATTCCTATGAGGTGACTGGTTCATCCCCATTTGTGTTCGATTTATTGATTCAGACTTGTGCAAAATTGAGATTGATTGATTTTGCTTTGTGTGTTTGTTCTCATTTGGAGGAACGTGGGTTCTCGTTAAGTCTGATAAGTTTCAACACTTTGATTCATGTTGTGGAAAAATCTGATGAGAATCATAAGGTTTGGAAAATTTATGAGCAAATGATCCGGAAAAGAGTTTACCCAAATGCAATTACTGTTAGAATCATGATTAATTCGTTATGTAAGGAAGGTAAATTGCAAGAAACTTCTGATATGTTGAATAGAATCCGTGGCAGTCGTTGCTCTGCTTCTTTGATTGTCAATACTTGTTTGATTTACAGGATTTTGGAGGAGGGAAGAGTTGAAGAAGGTGTAATGTTGTTGAAGAGAATGTTGCAGAAAAATATGGTTCTTGACGACATTGCTTATTCACTGATTGTTTATGCTAAAGTGAAAACTGGGAGTATAACATCTGCATGGGAAGTGTTTGAGGAAATGTCTAAAAGAGGGTTTCGGGCAAATTCTTTCCTTTATACATTGTTCATTGGTGTCCATTGTAGAGGGGGAAAGATTGAGGAAGCTAATTGCTTAATGCAAGAGATGGAAAACATGGGTCTGAAGCCATATCCGGAGACCTTTAATCTTCTCATTGAAGGGTGTGCTACGTCAGGACATTCAGAAGAAAGCTTGAGAATGTGTGAGAAAATGTTAGATAGAGGGTTTCTTCCTAGTTGTTCAGTTTTCAACATGGCAATAGCTAAGATTTGTGAGGAAGGAGCTTTGAAAAATGCTAATGCATTGTTAACCATGTTATTAGATAAAGGGTTTTTACCTGATGAAACCACTTACACCAATCTGATCTTAGGATATAGGAAAAGTGGTGAAATTCAGGAGATTCTTAAGCTTTACTATGAAATGGAAGCTAGATTGCTGTCTCCTGGAGTGTCAGTTTTCTTTGTACTCATTGGGAGCCTTTGTCAATCTGGGAAATTGGAGGAAGCAGAGAAATATTGGAAGATTATGAAAGATAGCTCTATAACACCTAGTCTACCTATATATCAGACATTAACCTTGTTCTACTTGAAGAAGGGTAATAGAGAAAAAGCTCTAGAACTGTTTCAACATGGAACTGAAACGTTCATATACACTCTCTTCTCTGGCAGGATTCACTTGCGGAGGTTGACCTTCAGTTCAAATGGTGCAATCTGGTGGGGTAATCGTTCCATCAATATACTTGAACAACTTGTGAGCCTCAAGGATCGGAGAAATCTGGAAGTTCCGAAGAACATACAAATCAAGATGAACAGCTACGAGATTGCAAATGTTCATGAGAAGAAAATTACATTGAGGAGTTTTGAGAATTCTGTTGATCCGCCATCACTAGCAAGCTTCAGCGCAAAAGACGAATTTGGGATGCTTGGCGAAAAGAAAAATGTGAGTCTTACTAACTCTGATAGCATAGAGATGCTCAGAAAATTGATAATTTCTCCTCTCATTTATTAG

Coding sequence (CDS)

ATGGATGAAATTATCAACGACGACGCAACTGTCAATTCCATATGCGATTCATTCACAAGACGCGAAACCTGGGACACTCTTTCTCGAAAATTCCAGTTGCTCCAACTTAACGACTACTTGGTTCAAAAAGTCCTGCTCAAATTCCAGCAACCCGTTGATGCCAAACGCGCTCTGGGGTTCTTCCACTGGTCCGCCAAGAGCAAGAATTTCAATCATGGATCTCAATCGTACGGTATTATGATTCATATTTTAGTGAAAGCGCGGCTGGTAATCGATGCTCGAGCTTTGCTCGAGTCAATTTTGAAAAAAAATGAGGGGAACTCTTTTGACTTCTCGGTTGTAGATTCGCTTTTGGATTCCTATGAGGTGACTGGTTCATCCCCATTTGTGTTCGATTTATTGATTCAGACTTGTGCAAAATTGAGATTGATTGATTTTGCTTTGTGTGTTTGTTCTCATTTGGAGGAACGTGGGTTCTCGTTAAGTCTGATAAGTTTCAACACTTTGATTCATGTTGTGGAAAAATCTGATGAGAATCATAAGGTTTGGAAAATTTATGAGCAAATGATCCGGAAAAGAGTTTACCCAAATGCAATTACTGTTAGAATCATGATTAATTCGTTATGTAAGGAAGGTAAATTGCAAGAAACTTCTGATATGTTGAATAGAATCCGTGGCAGTCGTTGCTCTGCTTCTTTGATTGTCAATACTTGTTTGATTTACAGGATTTTGGAGGAGGGAAGAGTTGAAGAAGGTGTAATGTTGTTGAAGAGAATGTTGCAGAAAAATATGGTTCTTGACGACATTGCTTATTCACTGATTGTTTATGCTAAAGTGAAAACTGGGAGTATAACATCTGCATGGGAAGTGTTTGAGGAAATGTCTAAAAGAGGGTTTCGGGCAAATTCTTTCCTTTATACATTGTTCATTGGTGTCCATTGTAGAGGGGGAAAGATTGAGGAAGCTAATTGCTTAATGCAAGAGATGGAAAACATGGGTCTGAAGCCATATCCGGAGACCTTTAATCTTCTCATTGAAGGGTGTGCTACGTCAGGACATTCAGAAGAAAGCTTGAGAATGTGTGAGAAAATGTTAGATAGAGGGTTTCTTCCTAGTTGTTCAGTTTTCAACATGGCAATAGCTAAGATTTGTGAGGAAGGAGCTTTGAAAAATGCTAATGCATTGTTAACCATGTTATTAGATAAAGGGTTTTTACCTGATGAAACCACTTACACCAATCTGATCTTAGGATATAGGAAAAGTGGTGAAATTCAGGAGATTCTTAAGCTTTACTATGAAATGGAAGCTAGATTGCTGTCTCCTGGAGTGTCAGTTTTCTTTGTACTCATTGGGAGCCTTTGTCAATCTGGGAAATTGGAGGAAGCAGAGAAATATTGGAAGATTATGAAAGATAGCTCTATAACACCTAGTCTACCTATATATCAGACATTAACCTTGTTCTACTTGAAGAAGGGTAATAGAGAAAAAGCTCTAGAACTGTTTCAACATGGAACTGAAACGTTCATATACACTCTCTTCTCTGGCAGGATTCACTTGCGGAGGTTGACCTTCAGTTCAAATGGTGCAATCTGGTGGGGTAATCGTTCCATCAATATACTTGAACAACTTGTGAGCCTCAAGGATCGGAGAAATCTGGAAGTTCCGAAGAACATACAAATCAAGATGAACAGCTACGAGATTGCAAATGTTCATGAGAAGAAAATTACATTGAGGAGTTTTGAGAATTCTGTTGATCCGCCATCACTAGCAAGCTTCAGCGCAAAAGACGAATTTGGGATGCTTGGCGAAAAGAAAAATGTGAGTCTTACTAACTCTGATAGCATAGAGATGCTCAGAAAATTGATAATTTCTCCTCTCATTTATTAG

Protein sequence

MDEIINDDATVNSICDSFTRRETWDTLSRKFQLLQLNDYLVQKVLLKFQQPVDAKRALGFFHWSAKSKNFNHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSFDFSVVDSLLDSYEVTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENHKVWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIYRILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRANSFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEESLRMCEKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKSGEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIYQTLTLFYLKKGNREKALELFQHGTETFIYTLFSGRIHLRRLTFSSNGAIWWGNRSINILEQLVSLKDRRNLEVPKNIQIKMNSYEIANVHEKKITLRSFENSVDPPSLASFSAKDEFGMLGEKKNVSLTNSDSIEMLRKLIISPLIY
Homology
BLAST of CcUC01G009280.1 vs. NCBI nr
Match: XP_038875410.1 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Benincasa hispida] >XP_038875411.1 pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Benincasa hispida])

HSP 1 Score: 913.3 bits (2359), Expect = 1.1e-261
Identity = 458/500 (91.60%), Postives = 479/500 (95.80%), Query Frame = 0

Query: 2   DEIINDDATVNSICDSFTRRETWDTLSRKFQLLQLNDYLVQKVLLKFQQPVDAKRALGFF 61
           DE+INDDATVNSICDSFTRRE+WDTL+RKFQLLQLND+LVQKVLLKFQQPVDAKRALGFF
Sbjct: 34  DELINDDATVNSICDSFTRRESWDTLTRKFQLLQLNDFLVQKVLLKFQQPVDAKRALGFF 93

Query: 62  HWSAKSKNFNHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSFDFSVVDSLLDSY 121
           HWSAK KNFNHGSQS GIMIHILVKARLVIDARALLESILKKNEG+SFDFSVVDSLLDSY
Sbjct: 94  HWSAKRKNFNHGSQSCGIMIHILVKARLVIDARALLESILKKNEGSSFDFSVVDSLLDSY 153

Query: 122 EVTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENHK 181
           EVT SSPFVFDLLIQTCAKLRLIDFALCVCS L E GFSLSLISFNTLIHVVEKSDEN K
Sbjct: 154 EVTSSSPFVFDLLIQTCAKLRLIDFALCVCSRLGEHGFSLSLISFNTLIHVVEKSDENRK 213

Query: 182 VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIY 241
           VWKIYE MIRKRVYPNAIT RIMINSLCKEGKLQETSDMLNR+ GSRCSASLIVN CLIY
Sbjct: 214 VWKIYEHMIRKRVYPNAITTRIMINSLCKEGKLQETSDMLNRVHGSRCSASLIVNACLIY 273

Query: 242 RILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRA 301
           RILEEGRVE+GVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGF+A
Sbjct: 274 RILEEGRVEDGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFQA 333

Query: 302 NSFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEESLRMC 361
           NSF+YTLFIGVHCR GKIEEA+CLMQEMENMGLKPYPETF+LLIEG ATSGHS+ESLRMC
Sbjct: 334 NSFIYTLFIGVHCREGKIEEAHCLMQEMENMGLKPYPETFSLLIEGYATSGHSKESLRMC 393

Query: 362 EKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKS 421
           EKML+RGFLPSCSVFN+AIAKICEEG +K ANALLT+LLDKGF+PDETTYTNLI+GY KS
Sbjct: 394 EKMLERGFLPSCSVFNLAIAKICEEGDVKKANALLTILLDKGFIPDETTYTNLIIGYWKS 453

Query: 422 GEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIY 481
           GEIQEILKLYYEMEARLLSPGVSVFF L+GSLCQ GKLEEAEKYWKIMKDSS+ PSLPIY
Sbjct: 454 GEIQEILKLYYEMEARLLSPGVSVFFALVGSLCQYGKLEEAEKYWKIMKDSSLKPSLPIY 513

Query: 482 QTLTLFYLKKGNREKALELF 502
           QTLTLFYLKKGNR KA EL+
Sbjct: 514 QTLTLFYLKKGNRAKAQELY 533

BLAST of CcUC01G009280.1 vs. NCBI nr
Match: XP_031740872.1 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucumis sativus] >KGN51057.1 hypothetical protein Csa_008589 [Cucumis sativus])

HSP 1 Score: 901.0 bits (2327), Expect = 5.9e-258
Identity = 448/500 (89.60%), Postives = 476/500 (95.20%), Query Frame = 0

Query: 2   DEIINDDATVNSICDSFTRRETWDTLSRKFQLLQLNDYLVQKVLLKFQQPVDAKRALGFF 61
           D++INDDATVNSICDS TRR++WDTLSRKFQ L+LND+LVQKVLLKFQQPVDAKRALGFF
Sbjct: 33  DKLINDDATVNSICDSLTRRQSWDTLSRKFQFLELNDFLVQKVLLKFQQPVDAKRALGFF 92

Query: 62  HWSAKSKNFNHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSFDFSVVDSLLDSY 121
           HWSAK KNFNHG QS+GIMIHILVKARLV+DARALLESILKKNEGNSFD+SVVDSL+DSY
Sbjct: 93  HWSAKRKNFNHGPQSFGIMIHILVKARLVLDARALLESILKKNEGNSFDYSVVDSLMDSY 152

Query: 122 EVTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENHK 181
           EVTGSSPFVFDLL+QTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDEN K
Sbjct: 153 EVTGSSPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENLK 212

Query: 182 VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIY 241
           VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRI GSRCSASLIVN CLIY
Sbjct: 213 VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIY 272

Query: 242 RILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRA 301
           RILEEGRVE+G+ LLKRMLQKNMVLDDIAYSLIVYAKVKTGSITS WEVFEEMS+RGF+A
Sbjct: 273 RILEEGRVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQA 332

Query: 302 NSFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEESLRMC 361
           NSF+YTLFIGVHCRGGK+EEA+CLMQEMENMGLKPYPETFNLLIEGCA SGHSEE L MC
Sbjct: 333 NSFIYTLFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMC 392

Query: 362 EKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKS 421
           EKML+RGFLPSCSVFN+AI KICE+G +K ANALLT+LLDKGFLPDETTYTNLI+GYRKS
Sbjct: 393 EKMLERGFLPSCSVFNVAIDKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKS 452

Query: 422 GEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIY 481
           GEIQEILKLYYEM ARLLSPGVSVFF LIGSLCQSG+LEEAEKY KI+KDSS+TP L IY
Sbjct: 453 GEIQEILKLYYEMGARLLSPGVSVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIY 512

Query: 482 QTLTLFYLKKGNREKALELF 502
           Q L L YLKKGNR KALEL+
Sbjct: 513 QALILLYLKKGNRAKALELY 532

BLAST of CcUC01G009280.1 vs. NCBI nr
Match: XP_008460528.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucumis melo] >KAA0062307.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK26670.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 898.3 bits (2320), Expect = 3.8e-257
Identity = 447/500 (89.40%), Postives = 475/500 (95.00%), Query Frame = 0

Query: 2   DEIINDDATVNSICDSFTRRETWDTLSRKFQLLQLNDYLVQKVLLKFQQPVDAKRALGFF 61
           D++INDDATVNSIC+SFTRR++WD LSRKFQ L+LND LVQKVLLKFQQPVDAK ALGFF
Sbjct: 34  DDLINDDATVNSICESFTRRQSWDALSRKFQFLELNDLLVQKVLLKFQQPVDAKLALGFF 93

Query: 62  HWSAKSKNFNHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSFDFSVVDSLLDSY 121
           HWSAK KNFNHGSQSYGIMIHILVKARLV+DARALL+SILKKNEGNSFD+SVVDSLLDSY
Sbjct: 94  HWSAKRKNFNHGSQSYGIMIHILVKARLVLDARALLQSILKKNEGNSFDYSVVDSLLDSY 153

Query: 122 EVTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENHK 181
           +VTGSSPFVFDLL+QTCAKLRLIDFALC CSHLEERGFSLSLISFNTLIHV+EKSDEN K
Sbjct: 154 KVTGSSPFVFDLLVQTCAKLRLIDFALCFCSHLEERGFSLSLISFNTLIHVLEKSDENRK 213

Query: 182 VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIY 241
           VWKIYEQMI KRVYPNAITVRIMINSLCKEGKLQETSDMLNRI GSRCSASLIVN CLIY
Sbjct: 214 VWKIYEQMIGKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIY 273

Query: 242 RILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRA 301
           RILEEGRVE+GVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITS WEVFEEMSKRGF+A
Sbjct: 274 RILEEGRVEDGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQA 333

Query: 302 NSFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEESLRMC 361
           NSF+YTL IGVHCRGG++EEA+CLMQEMENMGLKPY ETFNLLIEGCA SGHSEE LRMC
Sbjct: 334 NSFIYTLLIGVHCRGGEVEEAHCLMQEMENMGLKPYSETFNLLIEGCAISGHSEEILRMC 393

Query: 362 EKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKS 421
           EKML+RGFLPSCSVFN+AIAKICEEG +K AN LLT+LLDKGFLPDETTYTNLI+GYRKS
Sbjct: 394 EKMLERGFLPSCSVFNVAIAKICEEGDVKKANELLTILLDKGFLPDETTYTNLIIGYRKS 453

Query: 422 GEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIY 481
           GEI EILKLYYEMEARLLSPG+SVFF LIGSLCQSG+LEEAEKY KI+KDSS+TPSL IY
Sbjct: 454 GEILEILKLYYEMEARLLSPGISVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPSLSIY 513

Query: 482 QTLTLFYLKKGNREKALELF 502
           Q L LFYLKKGNR KALEL+
Sbjct: 514 QALILFYLKKGNRAKALELY 533

BLAST of CcUC01G009280.1 vs. NCBI nr
Match: XP_023550461.1 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 844.7 bits (2181), Expect = 5.0e-241
Identity = 426/498 (85.54%), Postives = 461/498 (92.57%), Query Frame = 0

Query: 2   DEIINDDATVNSICDSFTRRETWDTLSRKFQLLQLNDYLVQKVLLKFQQPVDAKRALGFF 61
           DE+IN+DA VNSICDSFTRRE+WDTL+RKF+ L+LND LVQKVLLKFQQ VDAKRALGFF
Sbjct: 34  DELINNDAIVNSICDSFTRRESWDTLTRKFETLELNDSLVQKVLLKFQQLVDAKRALGFF 93

Query: 62  HWSAKSKNFNHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSFDFSVVDSLLDSY 121
           HWSAK KNFNHG QSYGIMIHILVKARLVIDARALLESILKKNEG+SF+FS+VDSLLD+Y
Sbjct: 94  HWSAKRKNFNHGFQSYGIMIHILVKARLVIDARALLESILKKNEGSSFNFSIVDSLLDTY 153

Query: 122 EVTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENHK 181
           EVT SSPFVFDLLIQTCAKLRLIDFAL +C+HLEERGFSLSLISFNTL+HVVEKSDEN K
Sbjct: 154 EVTDSSPFVFDLLIQTCAKLRLIDFALNMCAHLEERGFSLSLISFNTLLHVVEKSDENRK 213

Query: 182 VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIY 241
           VWKIYEQMIRKRVYPN ITVRIMINSLCKEGKLQE SDML+RI GSRCSASLIVN CLIY
Sbjct: 214 VWKIYEQMIRKRVYPNVITVRIMINSLCKEGKLQEISDMLSRIHGSRCSASLIVNGCLIY 273

Query: 242 RILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRA 301
           RILEEGRVE+GVMLLKRMLQKNM+LDDIAYSLIVYAK+K G+I SA EVF+EMSKRGF+A
Sbjct: 274 RILEEGRVEDGVMLLKRMLQKNMILDDIAYSLIVYAKLKIGNIKSAQEVFDEMSKRGFQA 333

Query: 302 NSFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEESLRMC 361
           NSF+YTLFIG HCR G+IEEA+CLM+EMENMGLKPYPETFNLLIEGC     SEESLRMC
Sbjct: 334 NSFIYTLFIGAHCRDGRIEEAHCLMEEMENMGLKPYPETFNLLIEGCR---DSEESLRMC 393

Query: 362 EKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKS 421
           EKML+RGF+PSCS FN+AIAKICEEG +K AN +LT+LLDKGFLPDETTYTNLI+GY K 
Sbjct: 394 EKMLERGFVPSCSSFNVAIAKICEEGDVKKANEMLTILLDKGFLPDETTYTNLIIGYGKI 453

Query: 422 GEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIY 481
           GE QEILKLYYEM+ARLLSPGVSVFF LIGS CQSG+LEEAEKY KIMKD SI PS+ IY
Sbjct: 454 GETQEILKLYYEMDARLLSPGVSVFFALIGSFCQSGRLEEAEKYLKIMKDRSIQPSVSIY 513

Query: 482 QTLTLFYLKKGNREKALE 500
           QTL+LFYLKKGNR KALE
Sbjct: 514 QTLSLFYLKKGNRAKALE 528

BLAST of CcUC01G009280.1 vs. NCBI nr
Match: XP_022961108.1 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucurbita moschata])

HSP 1 Score: 840.5 bits (2170), Expect = 9.5e-240
Identity = 425/498 (85.34%), Postives = 459/498 (92.17%), Query Frame = 0

Query: 2   DEIINDDATVNSICDSFTRRETWDTLSRKFQLLQLNDYLVQKVLLKFQQPVDAKRALGFF 61
           DE+IN+DA VNSICDSFTRRE+WDTL+RKF+ L+LND LVQKVLLKFQQ VDAKRALGFF
Sbjct: 34  DELINNDAIVNSICDSFTRRESWDTLTRKFETLELNDSLVQKVLLKFQQLVDAKRALGFF 93

Query: 62  HWSAKSKNFNHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSFDFSVVDSLLDSY 121
           HWSAK KNFNHG QSYGIMIHILVKARLVIDARALLESILKKNEG+SF+FS+VDSLLD+Y
Sbjct: 94  HWSAKRKNFNHGFQSYGIMIHILVKARLVIDARALLESILKKNEGSSFNFSIVDSLLDTY 153

Query: 122 EVTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENHK 181
           EVT SSPFVFDLLIQTCAKLRLIDFAL + +HLEERGFSLSLISFNTL+HVVEKSDEN K
Sbjct: 154 EVTDSSPFVFDLLIQTCAKLRLIDFALNMSAHLEERGFSLSLISFNTLLHVVEKSDENRK 213

Query: 182 VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIY 241
           VWKIYEQMIRKRVYPN ITVRIMINSLCKEGKLQE SDML+RI GSRCSASLIVN CLIY
Sbjct: 214 VWKIYEQMIRKRVYPNVITVRIMINSLCKEGKLQEISDMLSRIHGSRCSASLIVNGCLIY 273

Query: 242 RILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRA 301
           RILEEGRVE+GVMLLKRMLQKNM+LDDIAYSLI+YAK+K G+I SA EVF+EMSKRGF+A
Sbjct: 274 RILEEGRVEDGVMLLKRMLQKNMILDDIAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQA 333

Query: 302 NSFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEESLRMC 361
           NSF+YTLFIG HCRGG+IEEA+CLM+EMENMGLKPYPETFNLLIEGC     SEESLRMC
Sbjct: 334 NSFIYTLFIGAHCRGGRIEEAHCLMEEMENMGLKPYPETFNLLIEGCR---DSEESLRMC 393

Query: 362 EKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKS 421
           EKML+RGF+PSCS FN+AIAKICEEG +K AN +LT LLDKGFLPDETTY NLI+GY K 
Sbjct: 394 EKMLERGFVPSCSSFNVAIAKICEEGDVKKANEMLTTLLDKGFLPDETTYINLIIGYGKI 453

Query: 422 GEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIY 481
           GE QEILKLYYEM+ARLLSPGVSVFF LIGS CQSGKLEEAEKY KIMKD SI PS+ IY
Sbjct: 454 GETQEILKLYYEMDARLLSPGVSVFFALIGSFCQSGKLEEAEKYLKIMKDRSIQPSVSIY 513

Query: 482 QTLTLFYLKKGNREKALE 500
           QTL+LFYLKKGNR KALE
Sbjct: 514 QTLSLFYLKKGNRAKALE 528

BLAST of CcUC01G009280.1 vs. ExPASy Swiss-Prot
Match: Q3ECH5 (Pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g66345 PE=3 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 1.3e-135
Identity = 247/487 (50.72%), Postives = 333/487 (68.38%), Query Frame = 0

Query: 11  VNSICDSFTRRETWDTLSRKFQLLQLNDYLVQKVLLKFQQPVDAKRALGFFHWSAKSKNF 70
           ++ I  S    +TW+TLS KF  + L+D L++ +LL+F+ P  AK+AL FFHWS+ ++N 
Sbjct: 50  IDYISKSLQSNDTWETLSTKFSSIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNL 109

Query: 71  NHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSFDFSVVDSLLDSYEVTGSSPFV 130
            HG +SY + IHILVKARL+IDARAL+ES L  +  +S    +VDSLLD+YE++ S+P V
Sbjct: 110 RHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDS---DLVDSLLDTYEISSSTPLV 169

Query: 131 FDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENHKVWKIYEQMI 190
           FDLL+Q  AK+R ++    V   L + GF+LS+I+ NTLIH   KS  +  VW+IYE  I
Sbjct: 170 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAI 229

Query: 191 RKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIYRILEEGRVE 250
            KR+YPN IT+RIMI  LCKEG+L+E  D+L+RI G RC  S+IVNT L++R+LEE R+E
Sbjct: 230 DKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIE 289

Query: 251 EGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRANSFLYTLFI 310
           E + LLKR+L KNMV+D I YS++VYAK K G + SA +VF+EM +RGF ANSF+YT+F+
Sbjct: 290 ESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFV 349

Query: 311 GVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEESLRMCEKMLDRGFL 370
            V C  G ++EA  L+ EME  G+ PY ETFN LI G A  G  E+ L  CE M+ RG +
Sbjct: 350 RVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 409

Query: 371 PSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKSGEIQEILKL 430
           PSCS FN  +  + +   +  AN +LT  +DKGF+PDE TY++LI G+ +  +I + LKL
Sbjct: 410 PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL 469

Query: 431 YYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIYQTLTLFYLK 490
           +YEME R +SPG  VF  LI  LC  GK+E  EKY KIMK   I P+  IY  L   + K
Sbjct: 470 FYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQK 529

Query: 491 KGNREKA 498
            G++  A
Sbjct: 530 IGDKTNA 533

BLAST of CcUC01G009280.1 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 189.1 bits (479), Expect = 1.5e-46
Identity = 119/453 (26.27%), Postives = 224/453 (49.45%), Query Frame = 0

Query: 52  VDAKRALGFFHWSAKSKNF--NHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSF 111
           V  K AL F  W  K      +H  Q   I  HILV+AR+   AR +L+ +   +  +SF
Sbjct: 48  VHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSF 107

Query: 112 DFSVVDSLLDSYEVTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTL 171
            F    +L+ +Y +  S+P V+D+LI+   +  +I  +L +   +   GF+ S+ + N +
Sbjct: 108 VFG---ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 167

Query: 172 IHVVEKSDENHKVWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRC 231
           +  V KS E+  VW   ++M+++++ P+  T  I+IN LC EG  +++S ++ ++  S  
Sbjct: 168 LGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGY 227

Query: 232 SASLIVNTCLIYRILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWE 291
           + +++    +++   ++GR +  + LL  M  K +  D   Y+++++   ++  I   + 
Sbjct: 228 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 287

Query: 292 VFEEMSKRGFRANSFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCA 351
           +  +M KR    N   Y   I      GK+  A+ L+ EM + GL P   TFN LI+G  
Sbjct: 288 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 347

Query: 352 TSGHSEESLRMCEKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDET 411
           + G+ +E+L+M   M  +G  PS   + + +  +C+      A      +   G      
Sbjct: 348 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 407

Query: 412 TYTNLILGYRKSGEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIM 471
           TYT +I G  K+G + E + L  EM    + P +  +  LI   C+ G+ + A++    +
Sbjct: 408 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 467

Query: 472 KDSSITPSLPIYQTLTLFYLKKGNREKALELFQ 503
               ++P+  IY TL     + G  ++A+ +++
Sbjct: 468 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497

BLAST of CcUC01G009280.1 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 3.7e-45
Identity = 126/499 (25.25%), Postives = 228/499 (45.69%), Query Frame = 0

Query: 44  VLLKFQQPVDAKRALGFFHWSAKSKNFNHGSQSYGIMIHILVKARLVIDARALLESILKK 103
           +LLK Q   D    L F +W+   + F    +   I +HIL K +L   A+ L E +  K
Sbjct: 54  LLLKSQN--DQALILKFLNWANPHQFFTLRCKC--ITLHILTKFKLYKTAQILAEDVAAK 113

Query: 104 NEGNSFDFSVVDSLLDSYEVTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSL 163
              + +   V  SL ++Y++  S+  VFDL++++ ++L LID AL +    +  GF   +
Sbjct: 114 TLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGV 173

Query: 164 ISFNTLIHVVEKSDENHK-VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLN 223
           +S+N ++    +S  N      ++++M+  +V PN  T  I+I   C  G +     + +
Sbjct: 174 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 233

Query: 224 RIRGSRCSASLIVNTCLI------------------------------YRIL-----EEG 283
           ++    C  +++    LI                              Y ++      EG
Sbjct: 234 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 293

Query: 284 RVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRANSFLYT 343
           R++E   +L  M ++   LD++ Y+ ++    K G+   A  +  EM + G   +   YT
Sbjct: 294 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 353

Query: 344 LFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEESLRMCEKMLDR 403
             I   C+ G +  A   + +M   GL P   T+  L++G +  G+  E+ R+  +M D 
Sbjct: 354 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 413

Query: 404 GFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKSGEIQEI 463
           GF PS   +N  I   C  G +++A A+L  + +KG  PD  +Y+ ++ G+ +S ++ E 
Sbjct: 414 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 473

Query: 464 LKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIYQTLTLF 507
           L++  EM  + + P    +  LI   C+  + +EA   ++ M    + P    Y  L   
Sbjct: 474 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 533

BLAST of CcUC01G009280.1 vs. ExPASy Swiss-Prot
Match: Q9LN69 (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana OX=3702 GN=At1g19290 PE=3 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 6.3e-45
Identity = 134/532 (25.19%), Postives = 248/532 (46.62%), Query Frame = 0

Query: 34  LQLNDYLVQKVLLKFQQPVDAKRALGFFHWSAKSKNFNHGSQSYGIMIHILVKARLVIDA 93
           L  +D L+  +L + +  ++ +  L  F+ ++K + F    ++Y  M+HIL +AR     
Sbjct: 66  LDFSDELLNSILRRLR--LNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQT 125

Query: 94  RALLESILKKNEGNSFDFSVVDSLLDSYEVTGSSPFVFDLLIQTCAKLRLIDFALCVCSH 153
           ++ L  ++  N      F V   L+  ++    SP VFD++++  A+  L+  AL V  +
Sbjct: 126 KSYLCELVALNHSG---FVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDN 185

Query: 154 LEERGFSLSLISFNTLIHVVEKSDENHKVWKIYEQMIRKRVYPNAITVRIMINSLCKEGK 213
           +   G   SL+S N+L+  + +  EN     +Y+QMI   V P+  T  I++N+ C+ G 
Sbjct: 186 MGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGN 245

Query: 214 L-------QETSDMLN----------------------------RIRGSR-CSASLIVNT 273
           +       +ET   L                             R+   R  S +++  T
Sbjct: 246 VDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYT 305

Query: 274 CLIYRILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKR 333
            LI    ++G +EE   + + + +K +V D   Y +++    +TG I  A  V + M + 
Sbjct: 306 SLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEI 365

Query: 334 GFRANSFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEES 393
           G R N+ +    I  +C+ G++ EA  +   M +  LKP   T+N L++G   +G+ +E+
Sbjct: 366 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 425

Query: 394 LRMCEKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILG 453
           L++C++M  +  +P+   +N+ +      GA  +  +L  M+L +G   DE + + L+  
Sbjct: 426 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 485

Query: 454 YRKSGEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPS 513
             K G+  E +KL+  + AR L        V+I  LC+  K+ EA++    +      P+
Sbjct: 486 LFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPA 545

Query: 514 LPIYQTLTLFYLKKGNREKALELFQHGTETFIY-------TLFSGRIHLRRL 523
           +  YQ L+  Y K GN ++A  + ++     I+       TL SG    R L
Sbjct: 546 VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHL 592

BLAST of CcUC01G009280.1 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.4e-44
Identity = 110/414 (26.57%), Postives = 207/414 (50.00%), Query Frame = 0

Query: 90  VIDARALLESILKKNEGNSFDFSVVDSLLDSYEVTG--SSPFVFDLLIQTCAKLRLIDFA 149
           VID   L  +I K  +     + +V +L    E  G   S +   ++I    + R + +A
Sbjct: 88  VIDFNRLFSAIAKTKQ-----YELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYA 147

Query: 150 LCVCSHLEERGFSLSLISFNTLIHVVEKSDENHKVWKIYEQMIRKRVYPNAITVRIMINS 209
                 + + G+    + FNTL++ +       +  ++ ++M+     P  IT+  ++N 
Sbjct: 148 FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG 207

Query: 210 LCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIYRILEEGRVEEGVMLLKRMLQKNMVLD 269
           LC  GK+ +   +++R+  +    + +    ++  + + G+    + LL++M ++N+ LD
Sbjct: 208 LCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 267

Query: 270 DIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRANSFLYTLFIGVHCRGGKIEEANCLMQ 329
            + YS+I+    K GS+ +A+ +F EM  +GF+A+   Y   IG  C  G+ ++   L++
Sbjct: 268 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 327

Query: 330 EMENMGLKPYPETFNLLIEGCATSGHSEESLRMCEKMLDRGFLPSCSVFNMAIAKICEEG 389
           +M    + P   TF++LI+     G   E+ ++ ++M+ RG  P+   +N  I   C+E 
Sbjct: 328 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 387

Query: 390 ALKNANALLTMLLDKGFLPDETTYTNLILGYRKSGEIQEILKLYYEMEARLLSPGVSVFF 449
            L+ A  ++ +++ KG  PD  T+  LI GY K+  I + L+L+ EM  R +      + 
Sbjct: 388 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 447

Query: 450 VLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIYQTLTLFYLKKGNREKALELF 502
            L+   CQSGKLE A+K ++ M    + P +  Y+ L       G  EKALE+F
Sbjct: 448 TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496

BLAST of CcUC01G009280.1 vs. ExPASy TrEMBL
Match: A0A0A0KRP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G423870 PE=4 SV=1)

HSP 1 Score: 901.0 bits (2327), Expect = 2.9e-258
Identity = 448/500 (89.60%), Postives = 476/500 (95.20%), Query Frame = 0

Query: 2   DEIINDDATVNSICDSFTRRETWDTLSRKFQLLQLNDYLVQKVLLKFQQPVDAKRALGFF 61
           D++INDDATVNSICDS TRR++WDTLSRKFQ L+LND+LVQKVLLKFQQPVDAKRALGFF
Sbjct: 33  DKLINDDATVNSICDSLTRRQSWDTLSRKFQFLELNDFLVQKVLLKFQQPVDAKRALGFF 92

Query: 62  HWSAKSKNFNHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSFDFSVVDSLLDSY 121
           HWSAK KNFNHG QS+GIMIHILVKARLV+DARALLESILKKNEGNSFD+SVVDSL+DSY
Sbjct: 93  HWSAKRKNFNHGPQSFGIMIHILVKARLVLDARALLESILKKNEGNSFDYSVVDSLMDSY 152

Query: 122 EVTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENHK 181
           EVTGSSPFVFDLL+QTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDEN K
Sbjct: 153 EVTGSSPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENLK 212

Query: 182 VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIY 241
           VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRI GSRCSASLIVN CLIY
Sbjct: 213 VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIY 272

Query: 242 RILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRA 301
           RILEEGRVE+G+ LLKRMLQKNMVLDDIAYSLIVYAKVKTGSITS WEVFEEMS+RGF+A
Sbjct: 273 RILEEGRVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQA 332

Query: 302 NSFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEESLRMC 361
           NSF+YTLFIGVHCRGGK+EEA+CLMQEMENMGLKPYPETFNLLIEGCA SGHSEE L MC
Sbjct: 333 NSFIYTLFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMC 392

Query: 362 EKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKS 421
           EKML+RGFLPSCSVFN+AI KICE+G +K ANALLT+LLDKGFLPDETTYTNLI+GYRKS
Sbjct: 393 EKMLERGFLPSCSVFNVAIDKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKS 452

Query: 422 GEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIY 481
           GEIQEILKLYYEM ARLLSPGVSVFF LIGSLCQSG+LEEAEKY KI+KDSS+TP L IY
Sbjct: 453 GEIQEILKLYYEMGARLLSPGVSVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIY 512

Query: 482 QTLTLFYLKKGNREKALELF 502
           Q L L YLKKGNR KALEL+
Sbjct: 513 QALILLYLKKGNRAKALELY 532

BLAST of CcUC01G009280.1 vs. ExPASy TrEMBL
Match: A0A5D3DTQ8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003260 PE=4 SV=1)

HSP 1 Score: 898.3 bits (2320), Expect = 1.9e-257
Identity = 447/500 (89.40%), Postives = 475/500 (95.00%), Query Frame = 0

Query: 2   DEIINDDATVNSICDSFTRRETWDTLSRKFQLLQLNDYLVQKVLLKFQQPVDAKRALGFF 61
           D++INDDATVNSIC+SFTRR++WD LSRKFQ L+LND LVQKVLLKFQQPVDAK ALGFF
Sbjct: 34  DDLINDDATVNSICESFTRRQSWDALSRKFQFLELNDLLVQKVLLKFQQPVDAKLALGFF 93

Query: 62  HWSAKSKNFNHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSFDFSVVDSLLDSY 121
           HWSAK KNFNHGSQSYGIMIHILVKARLV+DARALL+SILKKNEGNSFD+SVVDSLLDSY
Sbjct: 94  HWSAKRKNFNHGSQSYGIMIHILVKARLVLDARALLQSILKKNEGNSFDYSVVDSLLDSY 153

Query: 122 EVTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENHK 181
           +VTGSSPFVFDLL+QTCAKLRLIDFALC CSHLEERGFSLSLISFNTLIHV+EKSDEN K
Sbjct: 154 KVTGSSPFVFDLLVQTCAKLRLIDFALCFCSHLEERGFSLSLISFNTLIHVLEKSDENRK 213

Query: 182 VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIY 241
           VWKIYEQMI KRVYPNAITVRIMINSLCKEGKLQETSDMLNRI GSRCSASLIVN CLIY
Sbjct: 214 VWKIYEQMIGKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIY 273

Query: 242 RILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRA 301
           RILEEGRVE+GVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITS WEVFEEMSKRGF+A
Sbjct: 274 RILEEGRVEDGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQA 333

Query: 302 NSFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEESLRMC 361
           NSF+YTL IGVHCRGG++EEA+CLMQEMENMGLKPY ETFNLLIEGCA SGHSEE LRMC
Sbjct: 334 NSFIYTLLIGVHCRGGEVEEAHCLMQEMENMGLKPYSETFNLLIEGCAISGHSEEILRMC 393

Query: 362 EKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKS 421
           EKML+RGFLPSCSVFN+AIAKICEEG +K AN LLT+LLDKGFLPDETTYTNLI+GYRKS
Sbjct: 394 EKMLERGFLPSCSVFNVAIAKICEEGDVKKANELLTILLDKGFLPDETTYTNLIIGYRKS 453

Query: 422 GEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIY 481
           GEI EILKLYYEMEARLLSPG+SVFF LIGSLCQSG+LEEAEKY KI+KDSS+TPSL IY
Sbjct: 454 GEILEILKLYYEMEARLLSPGISVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPSLSIY 513

Query: 482 QTLTLFYLKKGNREKALELF 502
           Q L LFYLKKGNR KALEL+
Sbjct: 514 QALILFYLKKGNRAKALELY 533

BLAST of CcUC01G009280.1 vs. ExPASy TrEMBL
Match: A0A1S3CCN8 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499327 PE=4 SV=1)

HSP 1 Score: 898.3 bits (2320), Expect = 1.9e-257
Identity = 447/500 (89.40%), Postives = 475/500 (95.00%), Query Frame = 0

Query: 2   DEIINDDATVNSICDSFTRRETWDTLSRKFQLLQLNDYLVQKVLLKFQQPVDAKRALGFF 61
           D++INDDATVNSIC+SFTRR++WD LSRKFQ L+LND LVQKVLLKFQQPVDAK ALGFF
Sbjct: 34  DDLINDDATVNSICESFTRRQSWDALSRKFQFLELNDLLVQKVLLKFQQPVDAKLALGFF 93

Query: 62  HWSAKSKNFNHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSFDFSVVDSLLDSY 121
           HWSAK KNFNHGSQSYGIMIHILVKARLV+DARALL+SILKKNEGNSFD+SVVDSLLDSY
Sbjct: 94  HWSAKRKNFNHGSQSYGIMIHILVKARLVLDARALLQSILKKNEGNSFDYSVVDSLLDSY 153

Query: 122 EVTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENHK 181
           +VTGSSPFVFDLL+QTCAKLRLIDFALC CSHLEERGFSLSLISFNTLIHV+EKSDEN K
Sbjct: 154 KVTGSSPFVFDLLVQTCAKLRLIDFALCFCSHLEERGFSLSLISFNTLIHVLEKSDENRK 213

Query: 182 VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIY 241
           VWKIYEQMI KRVYPNAITVRIMINSLCKEGKLQETSDMLNRI GSRCSASLIVN CLIY
Sbjct: 214 VWKIYEQMIGKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIY 273

Query: 242 RILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRA 301
           RILEEGRVE+GVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITS WEVFEEMSKRGF+A
Sbjct: 274 RILEEGRVEDGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQA 333

Query: 302 NSFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEESLRMC 361
           NSF+YTL IGVHCRGG++EEA+CLMQEMENMGLKPY ETFNLLIEGCA SGHSEE LRMC
Sbjct: 334 NSFIYTLLIGVHCRGGEVEEAHCLMQEMENMGLKPYSETFNLLIEGCAISGHSEEILRMC 393

Query: 362 EKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKS 421
           EKML+RGFLPSCSVFN+AIAKICEEG +K AN LLT+LLDKGFLPDETTYTNLI+GYRKS
Sbjct: 394 EKMLERGFLPSCSVFNVAIAKICEEGDVKKANELLTILLDKGFLPDETTYTNLIIGYRKS 453

Query: 422 GEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIY 481
           GEI EILKLYYEMEARLLSPG+SVFF LIGSLCQSG+LEEAEKY KI+KDSS+TPSL IY
Sbjct: 454 GEILEILKLYYEMEARLLSPGISVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPSLSIY 513

Query: 482 QTLTLFYLKKGNREKALELF 502
           Q L LFYLKKGNR KALEL+
Sbjct: 514 QALILFYLKKGNRAKALELY 533

BLAST of CcUC01G009280.1 vs. ExPASy TrEMBL
Match: A0A6J1HAX5 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111461713 PE=4 SV=1)

HSP 1 Score: 840.5 bits (2170), Expect = 4.6e-240
Identity = 425/498 (85.34%), Postives = 459/498 (92.17%), Query Frame = 0

Query: 2   DEIINDDATVNSICDSFTRRETWDTLSRKFQLLQLNDYLVQKVLLKFQQPVDAKRALGFF 61
           DE+IN+DA VNSICDSFTRRE+WDTL+RKF+ L+LND LVQKVLLKFQQ VDAKRALGFF
Sbjct: 34  DELINNDAIVNSICDSFTRRESWDTLTRKFETLELNDSLVQKVLLKFQQLVDAKRALGFF 93

Query: 62  HWSAKSKNFNHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSFDFSVVDSLLDSY 121
           HWSAK KNFNHG QSYGIMIHILVKARLVIDARALLESILKKNEG+SF+FS+VDSLLD+Y
Sbjct: 94  HWSAKRKNFNHGFQSYGIMIHILVKARLVIDARALLESILKKNEGSSFNFSIVDSLLDTY 153

Query: 122 EVTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENHK 181
           EVT SSPFVFDLLIQTCAKLRLIDFAL + +HLEERGFSLSLISFNTL+HVVEKSDEN K
Sbjct: 154 EVTDSSPFVFDLLIQTCAKLRLIDFALNMSAHLEERGFSLSLISFNTLLHVVEKSDENRK 213

Query: 182 VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIY 241
           VWKIYEQMIRKRVYPN ITVRIMINSLCKEGKLQE SDML+RI GSRCSASLIVN CLIY
Sbjct: 214 VWKIYEQMIRKRVYPNVITVRIMINSLCKEGKLQEISDMLSRIHGSRCSASLIVNGCLIY 273

Query: 242 RILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRA 301
           RILEEGRVE+GVMLLKRMLQKNM+LDDIAYSLI+YAK+K G+I SA EVF+EMSKRGF+A
Sbjct: 274 RILEEGRVEDGVMLLKRMLQKNMILDDIAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQA 333

Query: 302 NSFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEESLRMC 361
           NSF+YTLFIG HCRGG+IEEA+CLM+EMENMGLKPYPETFNLLIEGC     SEESLRMC
Sbjct: 334 NSFIYTLFIGAHCRGGRIEEAHCLMEEMENMGLKPYPETFNLLIEGCR---DSEESLRMC 393

Query: 362 EKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKS 421
           EKML+RGF+PSCS FN+AIAKICEEG +K AN +LT LLDKGFLPDETTY NLI+GY K 
Sbjct: 394 EKMLERGFVPSCSSFNVAIAKICEEGDVKKANEMLTTLLDKGFLPDETTYINLIIGYGKI 453

Query: 422 GEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIY 481
           GE QEILKLYYEM+ARLLSPGVSVFF LIGS CQSGKLEEAEKY KIMKD SI PS+ IY
Sbjct: 454 GETQEILKLYYEMDARLLSPGVSVFFALIGSFCQSGKLEEAEKYLKIMKDRSIQPSVSIY 513

Query: 482 QTLTLFYLKKGNREKALE 500
           QTL+LFYLKKGNR KALE
Sbjct: 514 QTLSLFYLKKGNRAKALE 528

BLAST of CcUC01G009280.1 vs. ExPASy TrEMBL
Match: A0A6J1JRQ4 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111487740 PE=4 SV=1)

HSP 1 Score: 834.7 bits (2155), Expect = 2.5e-238
Identity = 422/498 (84.74%), Postives = 460/498 (92.37%), Query Frame = 0

Query: 3   EIINDDATVNSICDSFTRRETWDTLSRKFQLLQLNDYLVQKVLLKFQQPVDAKRALGFFH 62
           E+IN+DA VNSICDSFTRRE+WDTL+RKF+ L+LND LVQKVLLKFQQ VD+KRALGFFH
Sbjct: 35  ELINNDAVVNSICDSFTRRESWDTLTRKFETLELNDSLVQKVLLKFQQLVDSKRALGFFH 94

Query: 63  WSAKSKNFNHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSFDFSVVDSLLDSYE 122
           WSAK KNFNHG QSYGIMIHILVKARLV DARALLESILKKNEG+SF+FS+VDSLLD+YE
Sbjct: 95  WSAKRKNFNHGVQSYGIMIHILVKARLVNDARALLESILKKNEGSSFNFSIVDSLLDTYE 154

Query: 123 VTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENHKV 182
           VT SSPFVFDLLIQTCAKLRLIDFAL +C+HLEERGFSLSLISFNTL+HVVEKSDEN KV
Sbjct: 155 VTDSSPFVFDLLIQTCAKLRLIDFALNMCAHLEERGFSLSLISFNTLLHVVEKSDENRKV 214

Query: 183 WKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIYR 242
           WKIYEQMIRKRVYP+ ITVRIMINSLCKEGKLQE SDML+RI GSRCSASLIVN CLIYR
Sbjct: 215 WKIYEQMIRKRVYPDVITVRIMINSLCKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYR 274

Query: 243 ILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRAN 302
           ILEEGRVE+GVMLLKRMLQKNM+LDDIAYSLIVYAK+K G+I  A EVF+EMSKRGF+AN
Sbjct: 275 ILEEGRVEDGVMLLKRMLQKNMILDDIAYSLIVYAKLKIGNIKCAQEVFDEMSKRGFQAN 334

Query: 303 SFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLI-EGCATSGHSEESLRMC 362
           SF+YTLFIG HCR G+IEEA+CLM+EMENMGLKPYPETFNLLI EGC   G SEESLR+C
Sbjct: 335 SFIYTLFIGAHCRDGRIEEAHCLMEEMENMGLKPYPETFNLLIEEGC---GDSEESLRLC 394

Query: 363 EKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKS 422
           EKML+RGF+PSCS FN+AIAKICEEG +K AN +LT+LLDKGFLPDETTYTNLI+GY K 
Sbjct: 395 EKMLERGFVPSCSSFNVAIAKICEEGDVKKANEMLTILLDKGFLPDETTYTNLIIGYGKI 454

Query: 423 GEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIY 482
           GE QEILKLYYEM+ARLLSPGVSVFF LIGS CQSGKLEEAEKY+KIMKD SI PS+ IY
Sbjct: 455 GETQEILKLYYEMDARLLSPGVSVFFALIGSFCQSGKLEEAEKYFKIMKDRSIQPSVSIY 514

Query: 483 QTLTLFYLKKGNREKALE 500
           QTL+LFYLKKGNR KALE
Sbjct: 515 QTLSLFYLKKGNRAKALE 529

BLAST of CcUC01G009280.1 vs. TAIR 10
Match: AT1G66345.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 485.0 bits (1247), Expect = 9.4e-137
Identity = 247/487 (50.72%), Postives = 333/487 (68.38%), Query Frame = 0

Query: 11  VNSICDSFTRRETWDTLSRKFQLLQLNDYLVQKVLLKFQQPVDAKRALGFFHWSAKSKNF 70
           ++ I  S    +TW+TLS KF  + L+D L++ +LL+F+ P  AK+AL FFHWS+ ++N 
Sbjct: 50  IDYISKSLQSNDTWETLSTKFSSIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNL 109

Query: 71  NHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSFDFSVVDSLLDSYEVTGSSPFV 130
            HG +SY + IHILVKARL+IDARAL+ES L  +  +S    +VDSLLD+YE++ S+P V
Sbjct: 110 RHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDS---DLVDSLLDTYEISSSTPLV 169

Query: 131 FDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENHKVWKIYEQMI 190
           FDLL+Q  AK+R ++    V   L + GF+LS+I+ NTLIH   KS  +  VW+IYE  I
Sbjct: 170 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAI 229

Query: 191 RKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIYRILEEGRVE 250
            KR+YPN IT+RIMI  LCKEG+L+E  D+L+RI G RC  S+IVNT L++R+LEE R+E
Sbjct: 230 DKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIE 289

Query: 251 EGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRANSFLYTLFI 310
           E + LLKR+L KNMV+D I YS++VYAK K G + SA +VF+EM +RGF ANSF+YT+F+
Sbjct: 290 ESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFV 349

Query: 311 GVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEESLRMCEKMLDRGFL 370
            V C  G ++EA  L+ EME  G+ PY ETFN LI G A  G  E+ L  CE M+ RG +
Sbjct: 350 RVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 409

Query: 371 PSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKSGEIQEILKL 430
           PSCS FN  +  + +   +  AN +LT  +DKGF+PDE TY++LI G+ +  +I + LKL
Sbjct: 410 PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL 469

Query: 431 YYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIYQTLTLFYLK 490
           +YEME R +SPG  VF  LI  LC  GK+E  EKY KIMK   I P+  IY  L   + K
Sbjct: 470 FYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQK 529

Query: 491 KGNREKA 498
            G++  A
Sbjct: 530 IGDKTNA 533

BLAST of CcUC01G009280.1 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 189.1 bits (479), Expect = 1.1e-47
Identity = 119/453 (26.27%), Postives = 224/453 (49.45%), Query Frame = 0

Query: 52  VDAKRALGFFHWSAKSKNF--NHGSQSYGIMIHILVKARLVIDARALLESILKKNEGNSF 111
           V  K AL F  W  K      +H  Q   I  HILV+AR+   AR +L+ +   +  +SF
Sbjct: 88  VHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSF 147

Query: 112 DFSVVDSLLDSYEVTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTL 171
            F    +L+ +Y +  S+P V+D+LI+   +  +I  +L +   +   GF+ S+ + N +
Sbjct: 148 VFG---ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 207

Query: 172 IHVVEKSDENHKVWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIRGSRC 231
           +  V KS E+  VW   ++M+++++ P+  T  I+IN LC EG  +++S ++ ++  S  
Sbjct: 208 LGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGY 267

Query: 232 SASLIVNTCLIYRILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWE 291
           + +++    +++   ++GR +  + LL  M  K +  D   Y+++++   ++  I   + 
Sbjct: 268 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 327

Query: 292 VFEEMSKRGFRANSFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCA 351
           +  +M KR    N   Y   I      GK+  A+ L+ EM + GL P   TFN LI+G  
Sbjct: 328 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 387

Query: 352 TSGHSEESLRMCEKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDET 411
           + G+ +E+L+M   M  +G  PS   + + +  +C+      A      +   G      
Sbjct: 388 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 447

Query: 412 TYTNLILGYRKSGEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIM 471
           TYT +I G  K+G + E + L  EM    + P +  +  LI   C+ G+ + A++    +
Sbjct: 448 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 507

Query: 472 KDSSITPSLPIYQTLTLFYLKKGNREKALELFQ 503
               ++P+  IY TL     + G  ++A+ +++
Sbjct: 508 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537

BLAST of CcUC01G009280.1 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 184.5 bits (467), Expect = 2.6e-46
Identity = 126/499 (25.25%), Postives = 228/499 (45.69%), Query Frame = 0

Query: 44  VLLKFQQPVDAKRALGFFHWSAKSKNFNHGSQSYGIMIHILVKARLVIDARALLESILKK 103
           +LLK Q   D    L F +W+   + F    +   I +HIL K +L   A+ L E +  K
Sbjct: 54  LLLKSQN--DQALILKFLNWANPHQFFTLRCKC--ITLHILTKFKLYKTAQILAEDVAAK 113

Query: 104 NEGNSFDFSVVDSLLDSYEVTGSSPFVFDLLIQTCAKLRLIDFALCVCSHLEERGFSLSL 163
              + +   V  SL ++Y++  S+  VFDL++++ ++L LID AL +    +  GF   +
Sbjct: 114 TLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGV 173

Query: 164 ISFNTLIHVVEKSDENHK-VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLN 223
           +S+N ++    +S  N      ++++M+  +V PN  T  I+I   C  G +     + +
Sbjct: 174 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 233

Query: 224 RIRGSRCSASLIVNTCLI------------------------------YRIL-----EEG 283
           ++    C  +++    LI                              Y ++      EG
Sbjct: 234 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 293

Query: 284 RVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRANSFLYT 343
           R++E   +L  M ++   LD++ Y+ ++    K G+   A  +  EM + G   +   YT
Sbjct: 294 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 353

Query: 344 LFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEESLRMCEKMLDR 403
             I   C+ G +  A   + +M   GL P   T+  L++G +  G+  E+ R+  +M D 
Sbjct: 354 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 413

Query: 404 GFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILGYRKSGEIQEI 463
           GF PS   +N  I   C  G +++A A+L  + +KG  PD  +Y+ ++ G+ +S ++ E 
Sbjct: 414 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 473

Query: 464 LKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIYQTLTLF 507
           L++  EM  + + P    +  LI   C+  + +EA   ++ M    + P    Y  L   
Sbjct: 474 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 533

BLAST of CcUC01G009280.1 vs. TAIR 10
Match: AT1G19290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 183.7 bits (465), Expect = 4.5e-46
Identity = 134/532 (25.19%), Postives = 248/532 (46.62%), Query Frame = 0

Query: 34  LQLNDYLVQKVLLKFQQPVDAKRALGFFHWSAKSKNFNHGSQSYGIMIHILVKARLVIDA 93
           L  +D L+  +L + +  ++ +  L  F+ ++K + F    ++Y  M+HIL +AR     
Sbjct: 66  LDFSDELLNSILRRLR--LNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQT 125

Query: 94  RALLESILKKNEGNSFDFSVVDSLLDSYEVTGSSPFVFDLLIQTCAKLRLIDFALCVCSH 153
           ++ L  ++  N      F V   L+  ++    SP VFD++++  A+  L+  AL V  +
Sbjct: 126 KSYLCELVALNHSG---FVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDN 185

Query: 154 LEERGFSLSLISFNTLIHVVEKSDENHKVWKIYEQMIRKRVYPNAITVRIMINSLCKEGK 213
           +   G   SL+S N+L+  + +  EN     +Y+QMI   V P+  T  I++N+ C+ G 
Sbjct: 186 MGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGN 245

Query: 214 L-------QETSDMLN----------------------------RIRGSR-CSASLIVNT 273
           +       +ET   L                             R+   R  S +++  T
Sbjct: 246 VDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYT 305

Query: 274 CLIYRILEEGRVEEGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSAWEVFEEMSKR 333
            LI    ++G +EE   + + + +K +V D   Y +++    +TG I  A  V + M + 
Sbjct: 306 SLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEI 365

Query: 334 GFRANSFLYTLFIGVHCRGGKIEEANCLMQEMENMGLKPYPETFNLLIEGCATSGHSEES 393
           G R N+ +    I  +C+ G++ EA  +   M +  LKP   T+N L++G   +G+ +E+
Sbjct: 366 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 425

Query: 394 LRMCEKMLDRGFLPSCSVFNMAIAKICEEGALKNANALLTMLLDKGFLPDETTYTNLILG 453
           L++C++M  +  +P+   +N+ +      GA  +  +L  M+L +G   DE + + L+  
Sbjct: 426 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 485

Query: 454 YRKSGEIQEILKLYYEMEARLLSPGVSVFFVLIGSLCQSGKLEEAEKYWKIMKDSSITPS 513
             K G+  E +KL+  + AR L        V+I  LC+  K+ EA++    +      P+
Sbjct: 486 LFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPA 545

Query: 514 LPIYQTLTLFYLKKGNREKALELFQHGTETFIY-------TLFSGRIHLRRL 523
           +  YQ L+  Y K GN ++A  + ++     I+       TL SG    R L
Sbjct: 546 VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHL 592

BLAST of CcUC01G009280.1 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 1.7e-45
Identity = 110/414 (26.57%), Postives = 207/414 (50.00%), Query Frame = 0

Query: 90  VIDARALLESILKKNEGNSFDFSVVDSLLDSYEVTG--SSPFVFDLLIQTCAKLRLIDFA 149
           VID   L  +I K  +     + +V +L    E  G   S +   ++I    + R + +A
Sbjct: 88  VIDFNRLFSAIAKTKQ-----YELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYA 147

Query: 150 LCVCSHLEERGFSLSLISFNTLIHVVEKSDENHKVWKIYEQMIRKRVYPNAITVRIMINS 209
                 + + G+    + FNTL++ +       +  ++ ++M+     P  IT+  ++N 
Sbjct: 148 FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG 207

Query: 210 LCKEGKLQETSDMLNRIRGSRCSASLIVNTCLIYRILEEGRVEEGVMLLKRMLQKNMVLD 269
           LC  GK+ +   +++R+  +    + +    ++  + + G+    + LL++M ++N+ LD
Sbjct: 208 LCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 267

Query: 270 DIAYSLIVYAKVKTGSITSAWEVFEEMSKRGFRANSFLYTLFIGVHCRGGKIEEANCLMQ 329
            + YS+I+    K GS+ +A+ +F EM  +GF+A+   Y   IG  C  G+ ++   L++
Sbjct: 268 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 327

Query: 330 EMENMGLKPYPETFNLLIEGCATSGHSEESLRMCEKMLDRGFLPSCSVFNMAIAKICEEG 389
           +M    + P   TF++LI+     G   E+ ++ ++M+ RG  P+   +N  I   C+E 
Sbjct: 328 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 387

Query: 390 ALKNANALLTMLLDKGFLPDETTYTNLILGYRKSGEIQEILKLYYEMEARLLSPGVSVFF 449
            L+ A  ++ +++ KG  PD  T+  LI GY K+  I + L+L+ EM  R +      + 
Sbjct: 388 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 447

Query: 450 VLIGSLCQSGKLEEAEKYWKIMKDSSITPSLPIYQTLTLFYLKKGNREKALELF 502
            L+   CQSGKLE A+K ++ M    + P +  Y+ L       G  EKALE+F
Sbjct: 448 TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038875410.11.1e-26191.60pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Benincasa ... [more]
XP_031740872.15.9e-25889.60pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucumis sa... [more]
XP_008460528.13.8e-25789.40PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial ... [more]
XP_023550461.15.0e-24185.54pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucurbita ... [more]
XP_022961108.19.5e-24085.34pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucurbita ... [more]
Match NameE-valueIdentityDescription
Q3ECH51.3e-13550.72Pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Arabidop... [more]
Q9LVQ51.5e-4626.27Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... [more]
Q9FIX33.7e-4525.25Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Q9LN696.3e-4525.19Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis th... [more]
Q9LPX22.4e-4426.57Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0KRP72.9e-25889.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G423870 PE=4 SV=1[more]
A0A5D3DTQ81.9e-25789.40Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CCN81.9e-25789.40pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucumis ... [more]
A0A6J1HAX54.6e-24085.34pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucurbit... [more]
A0A6J1JRQ42.5e-23884.74pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
AT1G66345.19.4e-13750.72Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G55840.11.1e-4726.27Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G39710.12.6e-4625.25Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G19290.14.5e-4625.19Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G12775.11.7e-4526.57Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 200..231
e-value: 9.9E-4
score: 17.1
coord: 270..302
e-value: 0.0011
score: 17.0
coord: 340..373
e-value: 1.6E-5
score: 22.8
coord: 449..477
e-value: 6.6E-5
score: 20.8
coord: 305..336
e-value: 7.5E-5
score: 20.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 270..299
e-value: 0.062
score: 13.6
coord: 410..436
e-value: 4.3E-4
score: 20.3
coord: 448..473
e-value: 3.5E-4
score: 20.6
coord: 76..104
e-value: 0.28
score: 11.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 164..210
e-value: 1.6E-10
score: 41.0
coord: 302..349
e-value: 1.5E-8
score: 34.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 337..371
score: 10.731171
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 197..231
score: 8.769097
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 407..441
score: 10.413293
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 162..196
score: 8.933517
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 442..476
score: 10.270796
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 302..336
score: 11.202506
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 267..301
score: 9.96388
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 16..185
e-value: 8.2E-15
score: 56.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 283..387
e-value: 1.6E-25
score: 91.6
coord: 186..282
e-value: 6.1E-14
score: 53.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 388..539
e-value: 5.1E-23
score: 83.9
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 7..504
NoneNo IPR availablePANTHERPTHR45613:SF248PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIALcoord: 7..504

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CcUC01G009280CcUC01G009280gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC01G009280.1-exonCcUC01G009280.1-exon-CicolChr01:10687454..10687457exon
CcUC01G009280.1-exonCcUC01G009280.1-exon-CicolChr01:10687612..10689106exon
CcUC01G009280.1-exonCcUC01G009280.1-exon-CicolChr01:10689163..10689210exon
CcUC01G009280.1-exonCcUC01G009280.1-exon-CicolChr01:10689588..10689713exon
CcUC01G009280.1-exonCcUC01G009280.1-exon-CicolChr01:10689719..10689932exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC01G009280.1-cdsCcUC01G009280.1-cds-CicolChr01:10687454..10687457CDS
CcUC01G009280.1-cdsCcUC01G009280.1-cds-CicolChr01:10687612..10689106CDS
CcUC01G009280.1-cdsCcUC01G009280.1-cds-CicolChr01:10689163..10689210CDS
CcUC01G009280.1-cdsCcUC01G009280.1-cds-CicolChr01:10689588..10689713CDS
CcUC01G009280.1-cdsCcUC01G009280.1-cds-CicolChr01:10689719..10689932CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CcUC01G009280.1CcUC01G009280.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006396 RNA processing
molecular_function GO:0005515 protein binding