Carg27158-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27158-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	elongation factor family protein
Location	Carg_Chr11: 12029166 .. 12033058 (-)
Sequence length	1137
RNA-Seq Expression	Carg27158-RA
Synteny	Carg27158-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGTCCGTTGCTCCGATGTCTCTGGTCATCTTCTCGTAGATCTATTTCTTCCTCTTCTTATCATCACAAGTCTCATCTTATCACAAAATCATCCGTCTTCCCCAATCTCTTAGCGCGCGCTTTTTCAGCAGCCACTGCTACTTCTGCTGCTGGCGTCGCACCGAGTAGCGACCTTGATCCGAGCCGACTTAGGAACGTCGCGGTGATTGCTCATGTTGATCATGGAAAAACTACACTCATGGACCGTTTACTCCGGCAGTGCGGTGCTGATATTCCGCACGAGCGAGCTATGGATTCGATTAGTCTTGAGCGCGAGCGAGGCATTACTATAGCGTCGAAGGTAATTTCTGCTAATTTTTGTATATTTGTTGGTTTGGTTTGGTTTTAGGAGGATGATTCGTTGGAGATTGGTATTGATACAAATATAAAGAACCTCGGAGAGATTGAATGAGATTATCTTATAGCTATATGTATACGACTTTAATTTTCATTTGATAAATACATCCTATGAATTGGCTGATATGTATAATTTTGTCTTTGGCAGGTTACCTCTGTTTCATGGAAGGACAATGAGTTGAACATGGTGGATACGCCTGGTCACGCAGATTTCGGTGGAGAAGTATGTTTCCATTTCACTGACGACTTGAAATTCGATTTGTTCGTTTAATCGAAATTATATTTAGGATGTGAAATGTTCATTTTAATTGGTCTCTTATAATGATCATTTATGTTCGTACGTTCTGTTTTTGGAATCGACAAGAAAGAAAGTTGAAGAAGTCTGTTATAAATGTGAGGAGCGTAGTTTAATTAGTTCAGTTAGGTCCATGATGCACACTGAATTTTACAAACATTCCTGCTCAACTTGTCACGACAATTGTTTTATCATCAAATTAGGAAGTTTTAGATTTTATTTTCCATTTGTTCTTTTGAGCTTCCATTACCAGAGAAATTAAAACACAATCCTTCTCTCACTGTCAATGAAATGCTTCAAATGCAATAAGTTTTTTCTACTACTATTATACACAACTGGATCTATTTGGATGTAGGTAGAACGTGTTGTTGGAATGGTTGAAGGCGCAATTTTAGTTGTTGATGCTGGTGAAGGTCCATTGGCACAGACAAAGTTTGTTCTTGCAAAGGCCTTAAAGTATGGCCTCCGGCCCCTACTTCTTTTGAATAAAGTAGACCGACCATCAGGTATTTGGGAAAGAAGTCTTTTACTTTTTTAGTCAAACATATGTTTGAGAAGCAACTCCCTGCTTTCTTCCCCATCTGAATTGTCACCACGATTGAACACTTGGCCTATGTATTTGCATGAGAAAATGTGTCTAGAGAGGCTTTGGATACACTGAATCAATGATTGAGATGTACCTTTACTAGAACAATAATAGGTTAAACAACTTGTGTTTCCTTTTTTTTTTTTGAGTACAACATCAAGTGGGGGATTTGAACCTTTGACGTCTTGGTCAAGGGTACATGTCTACACTAGTTGAGTAATGTTTAGCAGCTTAGATTGACTTATAAATTGTGTTTATTTCTTATTCATAATGAGATGTCAACATAAAGTAGTCTAATCTCCTTGGAACTCAAGGTCATCTAGATACAATCAATATAATTGATTGGATGCTGCTGAAGTATGGAAGTAGAGGCTTGCTGATCACGTGTAATTAGTGTTGCTTGCTACCTTTTATGTAAATAAAGATAAATGATTTGTGTTTTTATGACCGTTAAGAAGGCATGTTTTGGCCTTTAAAAATGGTGATACTCAACTCCTTAATTACTTCTATTAAATTTGTCTTTTTATCCATTATAAGTCTCTCGCTTTTTTCCATCTTGTCAAATATCCTTTTAGGACTAATAGTAGTGACTACTTAAATAATATCTTGTGCAATAACGAAAATTATTTTCTCTAATTCTTAAAGACAAATAAACAATGTGACCAAAGGAGAGAGAAAATTGTACCAACCCTCAATTTACTTATGCAGTAACTGAAGAGAGATGTAATGAAGTTGAGAGCTGGTATTCGATCTATTTGCAAATCTGGGGGCTACAGGTACGGATAATGCATGAAGTAGAAATTTTCTACATTGCTATTCATCTGCTGTGACCTCAATTTATTTTCTAATGCACTAGGGTTGTTTGTGAATGGTTTCAATCAGTTTTTTTTTTATATAAAAAAAACAAAACAAAAATTCAGTAAAAAACACATTTCGCTAACCTTTCTTTAAAATACTATTTTTTTTCCTTCTTCTTTTGATGTGCTTTCATAAATGAACTATTTTTCAAAAGAAAAAAAAAGAAGGTACAATTTTGAACTGCGGTTTTGAAAATATCAATAGAACTTCTTTTCTCTGAATGATTTTTTCAAACACTTGTTTAGTCTAACCACTTTCTTTCATTATAACGTTTATTTAGAGGAGCAGTTAGACTTTCCTGTTCTTTATGCATCTGCTAAAGAAGGATGGGCTTCGGAGACTTTCACTAAAGATCCACTTGCCGAATGAGAAATATGTCACAGTTGCTTGATGCCATTGTAAGACATGTTCCTCCTCCCGCGGCAAAACTTGATGAACCTTTTCAGATGCTGGTAGGTTAAAGTGGTAATGATTTTTTAACTTTGATTTTTCAGTGATCTTCTGGATTTGGGAAATATATAAAATATTTTCTTGCATAAGATTTTCAACATACTTGATTGTGCCTTTTAGGTTTCTATGATGGAACGAGACTTTTATCTTGGACGAATATTGACCGGGCGTATTGCTTGTGGCATCATTCGTACTGGTGATAGAGTTCATGGACTCCGAGTGAAGGATTCTGGCGTTGAGAAAATTGAAGAGGGAAAGGTTTGCCATATAGGATTTTTATATAATACTTGAAAAGATTAAAGTTGGACTTCGTGGGTTTGTTTGACGACAATTCCTTGAGTTGAGTAACATTTTGAAATTTGGATTTGTTTTGTCTTTTGGATGGGCACATGTAGGATCTAAGACTAATCTAGGGACTTCTTCGACCAATCTTACACGTATTTTTCTTATGTTTTTATAGTTCTATGAAGTTATTCTTTCTATCAAGAGAGGTTCTATTGAGTTATTCTTGACATTCATGGTGAATTGATATAATACAAGTTCTGAGAATTATGTCATTTGTGTTTGTAGGTTGTGAAATTAATGAAAAAGAAAGGTACGACTGTTTGTTCAAATTGATAGTGCTGGGGCAGGCGATATAGTGTCAATGGCTGGGTTGGCACATCCTTCGATAGGTCATACTGTGGCTAATGTTGAAGTACGTTGTTGACTTCCCTTTATCTTAGAGTTTATGTTGTGCGTCACTGATGTTTTCCTTTACTCTTGTGTCTTCTAGGTTTTGGCTGCTTTTACCTACTTTTGAATTGGATCCTCCTACTATTTCCCATGACTTTTGGTGTTAATGATTCTCCACTGGCAGGTCGCGATGGTACCATGTGAGTTCTTTTGTTGAAATTTGGAATTATCAGCCTTGTAGTCATTCTACATCATTTTTTACTGCTACTATGTCCTTGCATTTAGTTTACTTGCTACTGCATGATGACCTATCACATTTCGCCTGTATTTTCTAGTCATAGCCTTTCTTAGTTTTCTTTATATTCATGGTTAAAATGTTTGTTTTGAATGTAAACATTGGAAGCAATGAGAAATGATTTGCACTACTCACATACTACTACTATTATATTTGTAGTTGACCGGTGGAAAAATTGGTGATCGATTGATGGCTGAAGCAGAAACAAATCTTGCCATAAATGTGCTTCCAGGCCTGTCAGAATCTTATGAGGTGCAAGGGCGAGGCGAACTTCAATTAGGTGCCCACTTCGGAAACTTCCATTCAGTGAAATTTCTAAGGCTTGAGGCTTAA

mRNA sequence

ATGGCGGGTCCGTTGCTCCGATGTCTCTGGTCATCTTCTCGTAGATCTATTTCTTCCTCTTCTTATCATCACAAGTCTCATCTTATCACAAAATCATCCGTCTTCCCCAATCTCTTAGCGCGCGCTTTTTCAGCAGCCACTGCTACTTCTGCTGCTGGCGTCGCACCGAGTAGCGACCTTGATCCGAGCCGACTTAGGAACGTCGCGGTGATTGCTCATGTTGATCATGGAAAAACTACACTCATGGACCGTTTACTCCGGCAGTGCGGTGCTGATATTCCGCACGAGCGAGCTATGGATTCGATTAGTCTTGAGCGCGAGCGAGGCATTACTATAGCGTCGAAGGTTACCTCTGTTTCATGGAAGGACAATGAGTTGAACATGGTGGATACGCCTGGTCACGCAGATTTCGGTGGAGAAGTAGAACGTGTTGTTGGAATGGTTGAAGGCGCAATTTTAGTTGTTGATGCTGGTGAAGGTCCATTGGCACAGACAAAGTTTGTTCTTGCAAAGGCCTTAAAGTATGGCCTCCGGCCCCTACTTCTTTTGAATAAAGTAGACCGACCATCAGTAACTGAAGAGAGATGTAATGAAGTTGAGAGCTGGTATTCGATCTATTTGCAAATCTGGGGGCTACAGTTGCTTGATGCCATTGTAAGACATGTTCCTCCTCCCGCGGCAAAACTTGATGAACCTTTTCAGATGCTGGTTTCTATGATGGAACGAGACTTTTATCTTGGACGAATATTGACCGGGCGTATTGCTTGTGGCATCATTCGTACTGGTGATAGAGTTCATGGACTCCGAGTGAAGGATTCTGGCGTTGAGAAAATTGAAGAGGGAAAGTTCTATGAAGTTATTCTTTCTATCAAGAGAGGTTCTATTGATGCTGGGGCAGGCGATATAGTGTCAATGGCTGGGTTGGCACATCCTTCGATAGGTCATACTGTGGCTAATGTTGAATTGACCGGTGGAAAAATTGGTGATCGATTGATGGCTGAAGCAGAAACAAATCTTGCCATAAATGTGCTTCCAGGCCTGTCAGAATCTTATGAGGTGCAAGGGCGAGGCGAACTTCAATTAGGTGCCCACTTCGGAAACTTCCATTCAGTGAAATTTCTAAGGCTTGAGGCTTAA

Coding sequence (CDS)

ATGGCGGGTCCGTTGCTCCGATGTCTCTGGTCATCTTCTCGTAGATCTATTTCTTCCTCTTCTTATCATCACAAGTCTCATCTTATCACAAAATCATCCGTCTTCCCCAATCTCTTAGCGCGCGCTTTTTCAGCAGCCACTGCTACTTCTGCTGCTGGCGTCGCACCGAGTAGCGACCTTGATCCGAGCCGACTTAGGAACGTCGCGGTGATTGCTCATGTTGATCATGGAAAAACTACACTCATGGACCGTTTACTCCGGCAGTGCGGTGCTGATATTCCGCACGAGCGAGCTATGGATTCGATTAGTCTTGAGCGCGAGCGAGGCATTACTATAGCGTCGAAGGTTACCTCTGTTTCATGGAAGGACAATGAGTTGAACATGGTGGATACGCCTGGTCACGCAGATTTCGGTGGAGAAGTAGAACGTGTTGTTGGAATGGTTGAAGGCGCAATTTTAGTTGTTGATGCTGGTGAAGGTCCATTGGCACAGACAAAGTTTGTTCTTGCAAAGGCCTTAAAGTATGGCCTCCGGCCCCTACTTCTTTTGAATAAAGTAGACCGACCATCAGTAACTGAAGAGAGATGTAATGAAGTTGAGAGCTGGTATTCGATCTATTTGCAAATCTGGGGGCTACAGTTGCTTGATGCCATTGTAAGACATGTTCCTCCTCCCGCGGCAAAACTTGATGAACCTTTTCAGATGCTGGTTTCTATGATGGAACGAGACTTTTATCTTGGACGAATATTGACCGGGCGTATTGCTTGTGGCATCATTCGTACTGGTGATAGAGTTCATGGACTCCGAGTGAAGGATTCTGGCGTTGAGAAAATTGAAGAGGGAAAGTTCTATGAAGTTATTCTTTCTATCAAGAGAGGTTCTATTGATGCTGGGGCAGGCGATATAGTGTCAATGGCTGGGTTGGCACATCCTTCGATAGGTCATACTGTGGCTAATGTTGAATTGACCGGTGGAAAAATTGGTGATCGATTGATGGCTGAAGCAGAAACAAATCTTGCCATAAATGTGCTTCCAGGCCTGTCAGAATCTTATGAGGTGCAAGGGCGAGGCGAACTTCAATTAGGTGCCCACTTCGGAAACTTCCATTCAGTGAAATTTCTAAGGCTTGAGGCTTAA

Protein sequence

MAGPLLRCLWSSSRRSISSSSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPSSDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVSWKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPLLLLNKVDRPSVTEERCNEVESWYSIYLQIWGLQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRVHGLRVKDSGVEKIEEGKFYEVILSIKRGSIDAGAGDIVSMAGLAHPSIGHTVANVELTGGKIGDRLMAEAETNLAINVLPGLSESYEVQGRGELQLGAHFGNFHSVKFLRLEA

Homology

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BLAST of Carg27158-RA vs. NCBI nr
Match: KAG7022844.1 (typA, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 743.4 bits (1918), Expect = 9.5e-211
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0


Query: 1   MAGPLLRCLWSSSRRSISSSSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPSSDL 60
           MAGPLLRCLWSSSRRSISSSSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPSSDL
Sbjct: 1   MAGPLLRCLWSSSRRSISSSSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPSSDL 60

Query: 61  DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS 120
           DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS
Sbjct: 61  DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS 120

Query: 121 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 180
           WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL
Sbjct: 121 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 180

Query: 181 LLLNKVDRPSVTEERCNEVESWYSIYLQIWGLQLLDAIVRHVPPPAAKLDEPFQMLVSMM 240
           LLLNKVDRPSVTEERCNEVESWYSIYLQIWGLQLLDAIVRHVPPPAAKLDEPFQMLVSMM
Sbjct: 181 LLLNKVDRPSVTEERCNEVESWYSIYLQIWGLQLLDAIVRHVPPPAAKLDEPFQMLVSMM 240

Query: 241 ERDFYLGRILTGRIACGIIRTGDRVHGLRVKDSGVEKIEEGKFYEVILSIKRGSIDAGAG 300
           ERDFYLGRILTGRIACGIIRTGDRVHGLRVKDSGVEKIEEGKFYEVILSIKRGSIDAGAG
Sbjct: 241 ERDFYLGRILTGRIACGIIRTGDRVHGLRVKDSGVEKIEEGKFYEVILSIKRGSIDAGAG 300

Query: 301 DIVSMAGLAHPSIGHTVANVELTGGKIGDRLMAEAETNLAINVLPGLSESYEVQGRGELQ 360
           DIVSMAGLAHPSIGHTVANVELTGGKIGDRLMAEAETNLAINVLPGLSESYEVQGRGELQ
Sbjct: 301 DIVSMAGLAHPSIGHTVANVELTGGKIGDRLMAEAETNLAINVLPGLSESYEVQGRGELQ 360

Query: 361 LGAHFGNFHSVKFLRLEA 379
           LGAHFGNFHSVKFLRLEA
Sbjct: 361 LGAHFGNFHSVKFLRLEA 378

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BLAST of Carg27158-RA vs. NCBI nr
Match: KAG6589143.1 (hypothetical protein SDJN03_17708, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 614.8 bits (1584), Expect = 5.1e-172
Identity = 344/446 (77.13%), Postives = 349/446 (78.25%), Query Frame = 0


Query: 1   MAGPLLRCLWSSSRRSISSSSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPSSDL 60
           MAGPLLRCLWSSSRRSISSSSYHHKSHLI+KSSVFPNLLARAFSAATATSAAGVAPSSDL
Sbjct: 1   MAGPLLRCLWSSSRRSISSSSYHHKSHLISKSSVFPNLLARAFSAATATSAAGVAPSSDL 60

Query: 61  DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS 120
           DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS
Sbjct: 61  DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS 120

Query: 121 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 180
           WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL
Sbjct: 121 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 180

Query: 181 LLLNKVDRPSVTEERCNEVES--------------------WYSIYLQIWG--------- 240
           LLLNKVDRPSVTEERCNEVES                     Y+   + W          
Sbjct: 181 LLLNKVDRPSVTEERCNEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASETFTKDPL 240

Query: 241 ------LQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV 300
                  QLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV
Sbjct: 241 AELRNMSQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV 300

Query: 301 HGLRVKDSGVEKIEEGKFYEVILSIKRGSI-----DAGAGDIVSMAGLAHPSIGHTVANV 360
           HGLRVKDSGVEKIEEGK   V L  K+G+       AGAGDIVSMAGLAHPSIGHTVANV
Sbjct: 301 HGLRVKDSGVEKIEEGKV--VKLMKKKGTTVVQIDSAGAGDIVSMAGLAHPSIGHTVANV 360

Query: 361 E---------------------------------LTGGKIGDRLMAEAETNLAINVLPGL 374
           E                                 LTGGKIGDRLMAEAETNLAINVLPGL
Sbjct: 361 EVLAALPTFELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVLPGL 420

[Close]

BLAST of Carg27158-RA vs. NCBI nr
Match: XP_022930818.1 (uncharacterized protein LOC111437186 [Cucurbita moschata])

HSP 1 Score: 614.8 bits (1584), Expect = 5.1e-172
Identity = 344/446 (77.13%), Postives = 349/446 (78.25%), Query Frame = 0


Query: 1   MAGPLLRCLWSSSRRSISSSSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPSSDL 60
           MAGPLLRCLWSSSRRSISSSSYHHKSHLI+KSSVFPNLLARAFSAATATSAAGVAPSSDL
Sbjct: 1   MAGPLLRCLWSSSRRSISSSSYHHKSHLISKSSVFPNLLARAFSAATATSAAGVAPSSDL 60

Query: 61  DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS 120
           DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS
Sbjct: 61  DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS 120

Query: 121 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 180
           WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL
Sbjct: 121 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 180

Query: 181 LLLNKVDRPSVTEERCNEVES--------------------WYSIYLQIWG--------- 240
           LLLNKVDRPSVTEERCNEVES                     Y+   + W          
Sbjct: 181 LLLNKVDRPSVTEERCNEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASETFTKDPL 240

Query: 241 ------LQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV 300
                  QLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV
Sbjct: 241 AESRNMSQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV 300

Query: 301 HGLRVKDSGVEKIEEGKFYEVILSIKRGSI-----DAGAGDIVSMAGLAHPSIGHTVANV 360
           HGLRVKDSGVEKIEEGK   V L  K+G+       AGAGDIVSMAGLAHPSIGHTVANV
Sbjct: 301 HGLRVKDSGVEKIEEGKV--VKLMKKKGTTVVQIDSAGAGDIVSMAGLAHPSIGHTVANV 360

Query: 361 E---------------------------------LTGGKIGDRLMAEAETNLAINVLPGL 374
           E                                 LTGGKIGDRLMAEAETNLAINVLPGL
Sbjct: 361 EVLAALPTFELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVLPGL 420

[Close]

BLAST of Carg27158-RA vs. NCBI nr
Match: XP_023531409.1 (uncharacterized protein LOC111793657 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 613.2 bits (1580), Expect = 1.5e-171
Identity = 343/446 (76.91%), Postives = 348/446 (78.03%), Query Frame = 0


Query: 1   MAGPLLRCLWSSSRRSISSSSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPSSDL 60
           MAGPLLRCLWSSSRRSISSSSYHHKSHLI+KSSVFPNLLARAFSAATATSAAGVAPSSDL
Sbjct: 1   MAGPLLRCLWSSSRRSISSSSYHHKSHLISKSSVFPNLLARAFSAATATSAAGVAPSSDL 60

Query: 61  DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS 120
           DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS
Sbjct: 61  DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS 120

Query: 121 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 180
           WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL
Sbjct: 121 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 180

Query: 181 LLLNKVDRPSVTEERCNEVES--------------------WYSIYLQIWG--------- 240
           LLLNKVDRPSVTEERCNEVES                     Y+   + W          
Sbjct: 181 LLLNKVDRPSVTEERCNEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASETFTKDPL 240

Query: 241 ------LQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV 300
                  QLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRI CGIIRTGDRV
Sbjct: 241 AESRNMSQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRITCGIIRTGDRV 300

Query: 301 HGLRVKDSGVEKIEEGKFYEVILSIKRGSI-----DAGAGDIVSMAGLAHPSIGHTVANV 360
           HGLRVKDSGVEKIEEGK   V L  K+G+       AGAGDIVSMAGLAHPSIGHTVANV
Sbjct: 301 HGLRVKDSGVEKIEEGKV--VKLMKKKGTTVVQIDSAGAGDIVSMAGLAHPSIGHTVANV 360

Query: 361 E---------------------------------LTGGKIGDRLMAEAETNLAINVLPGL 374
           E                                 LTGGKIGDRLMAEAETNLAINVLPGL
Sbjct: 361 EVLAALPTFELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVLPGL 420

[Close]

BLAST of Carg27158-RA vs. NCBI nr
Match: XP_022988705.1 (uncharacterized protein LOC111485959 [Cucurbita maxima])

HSP 1 Score: 610.9 bits (1574), Expect = 7.3e-171
Identity = 342/446 (76.68%), Postives = 347/446 (77.80%), Query Frame = 0


Query: 1   MAGPLLRCLWSSSRRSISSSSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPSSDL 60
           MAGPLLRCLW SSRRSISSSSYHHKSHLI+KSSVFPNLLARAFSAATATS AGVAPSSDL
Sbjct: 1   MAGPLLRCLWLSSRRSISSSSYHHKSHLISKSSVFPNLLARAFSAATATSTAGVAPSSDL 60

Query: 61  DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS 120
           DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS
Sbjct: 61  DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS 120

Query: 121 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 180
           WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL
Sbjct: 121 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 180

Query: 181 LLLNKVDRPSVTEERCNEVES--------------------WYSIYLQIWG--------- 240
           LLLNKVDRPSVTEERCNEVES                     Y+   + W          
Sbjct: 181 LLLNKVDRPSVTEERCNEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASETFTKDPL 240

Query: 241 ------LQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV 300
                  QLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV
Sbjct: 241 AESRNMSQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV 300

Query: 301 HGLRVKDSGVEKIEEGKFYEVILSIKRGSI-----DAGAGDIVSMAGLAHPSIGHTVANV 360
           HGLRVKDSGVEKIEEGK   V L  K+G+       AGAGDIVSMAGLAHPSIGHTVANV
Sbjct: 301 HGLRVKDSGVEKIEEGKV--VKLMKKKGTTVVQIDSAGAGDIVSMAGLAHPSIGHTVANV 360

Query: 361 E---------------------------------LTGGKIGDRLMAEAETNLAINVLPGL 374
           E                                 LTGGKIGDRLMAEAETNLAINVLPGL
Sbjct: 361 EVLAALPTFELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVLPGL 420

[Close]

BLAST of Carg27158-RA vs. ExPASy Swiss-Prot
Match: P72749 (50S ribosomal subunit assembly factor BipA OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=bipA PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.3e-58
Identity = 150/370 (40.54%), Postives = 208/370 (56.22%), Query Frame = 0


Query: 65  LRNVAVIAHVDHGKTTLMDRLLRQC-----GADIPHERAMDSISLERERGITIASKVTSV 124
           +RNVA+IAHVDHGKTTL+D LL+Q      G D+P    MDS  LERERGITI SK T+V
Sbjct: 5   IRNVAIIAHVDHGKTTLVDALLKQSGIFREGEDVP-VCVMDSNDLERERGITILSKNTAV 64

Query: 125 SWKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRP 184
            ++D  +N+VDTPGHADFGGEVERV+GMV+G +L+VDA EGP+ QT+FVL KAL+ GLRP
Sbjct: 65  RYQDTLINIVDTPGHADFGGEVERVLGMVDGCVLIVDANEGPMPQTRFVLKKALEKGLRP 124

Query: 185 LLLLNKVDRPSVTEERCNEVESWYSIYLQIW--------------GL------------- 244
           L+++NK+DRP         V+  + +++++               GL             
Sbjct: 125 LVVVNKIDRPRADPN--TAVDKVFDLFVELGADDDQCDFTTLFASGLGGFAKESLDDDSE 184

Query: 245 ---QLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRVHGLR 304
               L +AI+ HVPPPA   ++P Q+ V+ ++   YLGRI+ GRI  G ++ G +     
Sbjct: 185 DMKPLFEAILHHVPPPAGDPNKPLQLQVTTLDYSDYLGRIIIGRIHNGTVKAGQQ--AAL 244

Query: 305 VKDSGVEKIEEGKFYEVI--LSIKRGSI-DAGAGDIVSMAGLAHPSIGHTVANVE----- 363
           VK+ G   I +GK  +++    + R  + +A AG IV++AG A  +IG T+   +     
Sbjct: 245 VKEDG--SIAKGKVSKLLGFEGLNRIELPEASAGYIVAIAGFADANIGETLTCPDEPQAL 304

[Close]

BLAST of Carg27158-RA vs. ExPASy Swiss-Prot
Match: P44910 (50S ribosomal subunit assembly factor BipA OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=bipA PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.0e-54
Identity = 143/382 (37.43%), Postives = 207/382 (54.19%), Query Frame = 0


Query: 58  SDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCG------ADIPHERAMDSISLERERGIT 117
           +++D  +LRN+A+IAHVDHGKTTL+D+LL+Q G       D+  ER MDS  LE+ERGIT
Sbjct: 3   NEIDIKKLRNIAIIAHVDHGKTTLVDKLLQQSGTFESARGDV-DERVMDSNDLEKERGIT 62

Query: 118 IASKVTSVSWKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAK 177
           I +K T+++W D  +N+VDTPGHADFGGEVERV+ MV+  +LVVDA +GP+ QT+FV  K
Sbjct: 63  ILAKNTAINWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQK 122

Query: 178 ALKYGLRPLLLLNKVDRP------------------SVTEERCNEVESWYSIYLQIWGLQ 237
           A  +GL+P++++NKVDRP                    ++E+ +    + S    + GL+
Sbjct: 123 AFAHGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLE 182

Query: 238 ----------LLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGD 297
                     L +AIV+HV PP  +LD PFQM +S ++ + Y+G I  GRI  G I+   
Sbjct: 183 HEDLAEDMTPLFEAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQ 242

Query: 298 RVHGLRVKDSGVEKIEEGKFYEVI--LSIKRGSID-AGAGDIVSMAGLAHPSIGHTVANV 357
            V    +   G  K  +G+  +V+  L ++R   D A AGDIV++ GL   +I  T+ ++
Sbjct: 243 PV--TIINSEG--KTRQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDI 302

Query: 358 E---------------------------------LTGGKIGDRLMAEAETNLAINV--LP 368
                                             +T  +I +RL  E   N+A+ V   P
Sbjct: 303 NTVEALPSLTVDEPTVTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETP 362

[Close]

BLAST of Carg27158-RA vs. ExPASy Swiss-Prot
Match: O25225 (50S ribosomal subunit assembly factor BipA OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=bipA PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.8e-54
Identity = 133/367 (36.24%), Postives = 200/367 (54.50%), Query Frame = 0


Query: 65  LRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSISLERERGITIASKVTSVS 124
           +RN+AVIAHVDHGKTTL+D LL Q G     +   ER MDS  LERERGITI SK T++ 
Sbjct: 4   IRNIAVIAHVDHGKTTLVDGLLSQSGTFSEREKVDERVMDSNDLERERGITILSKNTAIY 63

Query: 125 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 184
           +KD ++N++DTPGHADFGGEVERV+ MV+G +L+VDA EG + QTKFV+ KAL +G+ P+
Sbjct: 64  YKDTKINIIDTPGHADFGGEVERVLKMVDGVLLLVDAQEGVMPQTKFVVKKALSFGICPI 123

Query: 185 LLLNKVDRPSVTEERCNEVESWYSIYLQIWGLQ--------------------------- 244
           +++NK+D+P+   +R   V+  + +++ +                               
Sbjct: 124 VVVNKIDKPAAEPDRV--VDEVFDLFVAMGASDKQLDFPVVYAAARDGYAMKSLDDEKKN 183

Query: 245 ---LLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRVHGLRV 304
              L + I+ HVP P+  +DEP QM +  ++ D Y+G+I   R+  G ++  + V  L +
Sbjct: 184 LEPLFETILEHVPSPSGSVDEPLQMQIFTLDYDNYVGKIGIARVFNGSVKKNESV--LLM 243

Query: 305 KDSGVEKIEEGKFYEVI--LSIKRGSID-AGAGDIVSMAGLAHPSIGHTVAN-------- 362
           K  G +  E G+  ++I  L + R  I+ A AGDIV++AG     +G +V +        
Sbjct: 244 KSDGSK--ENGRITKLIGFLGLARTEIENAYAGDIVAIAGFNAMDVGDSVVDPANPMPLD 303

[Close]

BLAST of Carg27158-RA vs. ExPASy Swiss-Prot
Match: Q9ZLZ3 (50S ribosomal subunit assembly factor BipA OS=Helicobacter pylori (strain J99 / ATCC 700824) OX=85963 GN=bipA PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.0e-53
Identity = 132/367 (35.97%), Postives = 200/367 (54.50%), Query Frame = 0


Query: 65  LRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSISLERERGITIASKVTSVS 124
           +RN+AVIAHVDHGKTTL+D LL Q G     +   ER MDS  LE+ERGITI SK T++ 
Sbjct: 4   IRNIAVIAHVDHGKTTLVDGLLSQSGTFSEREKVDERVMDSNDLEKERGITILSKNTAIY 63

Query: 125 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 184
           +KD ++N++DTPGHADFGGEVERV+ MV+G +L+VDA EG + QTKFV+ KAL +G+ P+
Sbjct: 64  YKDTKINIIDTPGHADFGGEVERVLKMVDGVLLLVDAQEGVMPQTKFVVKKALSFGICPI 123

Query: 185 LLLNKVDRPSVTEERCNEVESWYSIYLQIWGLQ--------------------------- 244
           +++NK+D+P+   +R   V+  + +++ +                               
Sbjct: 124 VVVNKIDKPAAEPDRV--VDEVFDLFVAMGASDKQLDFPVVYAAARDGYAMKSLDDEKKN 183

Query: 245 ---LLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRVHGLRV 304
              L + I+ HVP P+  +DEP QM +  ++ D Y+G+I   R+  G ++  + V  L +
Sbjct: 184 LEPLFETILEHVPSPSGSVDEPLQMQIFTLDYDNYVGKIGIARVFNGSVKKNESV--LLM 243

Query: 305 KDSGVEKIEEGKFYEVI--LSIKRGSID-AGAGDIVSMAGLAHPSIGHTVAN-------- 362
           K  G +  E G+  ++I  L + R  I+ A AGDIV++AG     +G +V +        
Sbjct: 244 KSDGSK--ENGRITKLIGFLGLARTEIENAYAGDIVALAGFNAMDVGDSVVDPTNPMPLD 303

[Close]

BLAST of Carg27158-RA vs. ExPASy Swiss-Prot
Match: P0A3B2 (50S ribosomal subunit assembly factor BipA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) OX=574521 GN=bipA PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.2e-53
Identity = 148/379 (39.05%), Postives = 199/379 (52.51%), Query Frame = 0


Query: 64  RLRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSISLERERGITIASKVTSV 123
           +LRN+A+IAHVDHGKTTL+D+LL+Q G         ER MDS  LE+ERGITI +K T++
Sbjct: 4   KLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAI 63

Query: 124 SWKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRP 183
            W D  +N+VDTPGHADFGGEVERV+ MV+  +LVVDA +GP+ QT+FV  KA  YGL+P
Sbjct: 64  KWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKP 123

Query: 184 LLLLNKVDRP------------------SVTEERCNEVESWYSIYLQIWGLQ-------- 243
           ++++NKVDRP                    T+E+ +    + S    I GL         
Sbjct: 124 IVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDM 183

Query: 244 --LLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRVHGLRVK 303
             L  AIV HVP P   LD PFQM +S ++ + Y+G I  GRI  G ++   +V    + 
Sbjct: 184 TPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQV---TII 243

Query: 304 DSGVEKIEEGKFYEVI--LSIKRGSID-AGAGDIVSMAGLAHPSIGHTVA---NVE---- 363
           DS   K    K  +V+  L ++R   D A AGDIV++ GL   +I  TV    NVE    
Sbjct: 244 DS-EGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPA 303

Query: 364 --------------------------LTGGKIGDRLMAEAETNLAINVLPGL-SESYEVQ 374
                                     +T  +I DRL  E   N+A+ V     ++++ V 
Sbjct: 304 LSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVS 363

[Close]

BLAST of Carg27158-RA vs. ExPASy TrEMBL
Match: A0A6J1EWG9 (uncharacterized protein LOC111437186 OS=Cucurbita moschata OX=3662 GN=LOC111437186 PE=4 SV=1)

HSP 1 Score: 614.8 bits (1584), Expect = 2.5e-172
Identity = 344/446 (77.13%), Postives = 349/446 (78.25%), Query Frame = 0


Query: 1   MAGPLLRCLWSSSRRSISSSSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPSSDL 60
           MAGPLLRCLWSSSRRSISSSSYHHKSHLI+KSSVFPNLLARAFSAATATSAAGVAPSSDL
Sbjct: 1   MAGPLLRCLWSSSRRSISSSSYHHKSHLISKSSVFPNLLARAFSAATATSAAGVAPSSDL 60

Query: 61  DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS 120
           DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS
Sbjct: 61  DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS 120

Query: 121 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 180
           WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL
Sbjct: 121 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 180

Query: 181 LLLNKVDRPSVTEERCNEVES--------------------WYSIYLQIWG--------- 240
           LLLNKVDRPSVTEERCNEVES                     Y+   + W          
Sbjct: 181 LLLNKVDRPSVTEERCNEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASETFTKDPL 240

Query: 241 ------LQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV 300
                  QLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV
Sbjct: 241 AESRNMSQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV 300

Query: 301 HGLRVKDSGVEKIEEGKFYEVILSIKRGSI-----DAGAGDIVSMAGLAHPSIGHTVANV 360
           HGLRVKDSGVEKIEEGK   V L  K+G+       AGAGDIVSMAGLAHPSIGHTVANV
Sbjct: 301 HGLRVKDSGVEKIEEGKV--VKLMKKKGTTVVQIDSAGAGDIVSMAGLAHPSIGHTVANV 360

Query: 361 E---------------------------------LTGGKIGDRLMAEAETNLAINVLPGL 374
           E                                 LTGGKIGDRLMAEAETNLAINVLPGL
Sbjct: 361 EVLAALPTFELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVLPGL 420

[Close]

BLAST of Carg27158-RA vs. ExPASy TrEMBL
Match: A0A6J1JKB6 (uncharacterized protein LOC111485959 OS=Cucurbita maxima OX=3661 GN=LOC111485959 PE=4 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 3.6e-171
Identity = 342/446 (76.68%), Postives = 347/446 (77.80%), Query Frame = 0


Query: 1   MAGPLLRCLWSSSRRSISSSSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPSSDL 60
           MAGPLLRCLW SSRRSISSSSYHHKSHLI+KSSVFPNLLARAFSAATATS AGVAPSSDL
Sbjct: 1   MAGPLLRCLWLSSRRSISSSSYHHKSHLISKSSVFPNLLARAFSAATATSTAGVAPSSDL 60

Query: 61  DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS 120
           DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS
Sbjct: 61  DPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVS 120

Query: 121 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 180
           WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL
Sbjct: 121 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPL 180

Query: 181 LLLNKVDRPSVTEERCNEVES--------------------WYSIYLQIWG--------- 240
           LLLNKVDRPSVTEERCNEVES                     Y+   + W          
Sbjct: 181 LLLNKVDRPSVTEERCNEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASETFTKDPL 240

Query: 241 ------LQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV 300
                  QLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV
Sbjct: 241 AESRNMSQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDRV 300

Query: 301 HGLRVKDSGVEKIEEGKFYEVILSIKRGSI-----DAGAGDIVSMAGLAHPSIGHTVANV 360
           HGLRVKDSGVEKIEEGK   V L  K+G+       AGAGDIVSMAGLAHPSIGHTVANV
Sbjct: 301 HGLRVKDSGVEKIEEGKV--VKLMKKKGTTVVQIDSAGAGDIVSMAGLAHPSIGHTVANV 360

Query: 361 E---------------------------------LTGGKIGDRLMAEAETNLAINVLPGL 374
           E                                 LTGGKIGDRLMAEAETNLAINVLPGL
Sbjct: 361 EVLAALPTFELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVLPGL 420

[Close]

BLAST of Carg27158-RA vs. ExPASy TrEMBL
Match: A0A0A0K3E9 (Tr-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G041340 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.7e-160
Identity = 326/449 (72.61%), Postives = 343/449 (76.39%), Query Frame = 0


Query: 1   MAGPLLRCLWSSSRRSISS---SSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPS 60
           MAGPLLR LWSSS RSISS   SS+H +SH+I+ SSVFPNLLARAFSAATAT+AA VAPS
Sbjct: 1   MAGPLLRRLWSSSHRSISSSSFSSFHLQSHIISPSSVFPNLLARAFSAATATAAAAVAPS 60

Query: 61  SDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVT 120
           SDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVT
Sbjct: 61  SDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVT 120

Query: 121 SVSWKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGL 180
           SVSWK+NELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGL
Sbjct: 121 SVSWKENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGL 180

Query: 181 RPLLLLNKVDRPSVTEERCNEVES--------------------WYSIYLQIWG------ 240
           RP+LLLNKVDRPSV+EERC+EVES                     Y+   + W       
Sbjct: 181 RPILLLNKVDRPSVSEERCSEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASNTYTK 240

Query: 241 ---------LQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTG 300
                     QLLDAI+RHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIA G++RTG
Sbjct: 241 DPPGELRNMSQLLDAIIRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIASGVVRTG 300

Query: 301 DRVHGLRVKDSGVEKIEEGKFYEVILSIKRGSI-----DAGAGDIVSMAGLAHPSIGHTV 360
           DRVHGLRVKDSGVEKIEEGK   V L  K+G+       AGAGDIVSMAGLA+PSIGHTV
Sbjct: 301 DRVHGLRVKDSGVEKIEEGKV--VKLMKKKGTTVVQIDSAGAGDIVSMAGLANPSIGHTV 360

Query: 361 ANVE---------------------------------LTGGKIGDRLMAEAETNLAINVL 374
           ANVE                                 LTGGKIGDRLMAEAETNLAINVL
Sbjct: 361 ANVEVLAALPTFELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL 420

[Close]

BLAST of Carg27158-RA vs. ExPASy TrEMBL
Match: A0A5A7UZY6 (GTP-binding protein TypA/BipA-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold786G00040 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 1.6e-158
Identity = 325/449 (72.38%), Postives = 341/449 (75.95%), Query Frame = 0


Query: 1   MAGPLLRCLWSSSRRSISS---SSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPS 60
           MAGPLLR LWSSS RSISS   SSYH KSH+I+ SSV PNLLARAFSAATAT+AA  AP+
Sbjct: 1   MAGPLLRRLWSSSHRSISSSSFSSYHLKSHIISPSSVLPNLLARAFSAATATAAA-TAPT 60

Query: 61  SDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVT 120
           SDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVT
Sbjct: 61  SDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVT 120

Query: 121 SVSWKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGL 180
           SVSWK+NELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGL
Sbjct: 121 SVSWKENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGL 180

Query: 181 RPLLLLNKVDRPSVTEERCNEVES--------------------WYSIYLQIWG------ 240
           RP+LLLNKVDRPSV+EERC+EVES                     Y+   + W       
Sbjct: 181 RPILLLNKVDRPSVSEERCSEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSTYTK 240

Query: 241 ---------LQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTG 300
                     QLLDAI+RHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIA G++RTG
Sbjct: 241 DPPGELRNMSQLLDAIIRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIASGVVRTG 300

Query: 301 DRVHGLRVKDSGVEKIEEGKFYEVILSIKRGSI-----DAGAGDIVSMAGLAHPSIGHTV 360
           DRVHGLRVKDSGVEKIEEGK   V L  K+G+       AGAGDIVSMAGLA+PSIGHTV
Sbjct: 301 DRVHGLRVKDSGVEKIEEGKV--VKLMKKKGTTVVQIDSAGAGDIVSMAGLANPSIGHTV 360

Query: 361 ANVE---------------------------------LTGGKIGDRLMAEAETNLAINVL 374
           ANVE                                 LTGGKIGDRLMAEAETNLAINVL
Sbjct: 361 ANVEVSAALPTFELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL 420

[Close]

BLAST of Carg27158-RA vs. ExPASy TrEMBL
Match: A0A1S3C0Z9 (GTP-binding protein TypA/BipA homolog OS=Cucumis melo OX=3656 GN=LOC103495631 PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 3.5e-158
Identity = 324/449 (72.16%), Postives = 341/449 (75.95%), Query Frame = 0


Query: 1   MAGPLLRCLWSSSRRSISS---SSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPS 60
           MAGPLLR LWSSS RSISS   SSYH KSH+I+ SSV PNLLARAFSAATAT+AA  AP+
Sbjct: 1   MAGPLLRRLWSSSHRSISSSSFSSYHLKSHIISPSSVLPNLLARAFSAATATAAA-TAPT 60

Query: 61  SDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVT 120
           SDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVT
Sbjct: 61  SDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVT 120

Query: 121 SVSWKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGL 180
           SVSWK+NELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGL
Sbjct: 121 SVSWKENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGL 180

Query: 181 RPLLLLNKVDRPSVTEERCNEVES--------------------WYSIYLQIWG------ 240
           RP+LLLNKVDRPSV+EERC+EVES                     Y+   + W       
Sbjct: 181 RPILLLNKVDRPSVSEERCSEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSTYTK 240

Query: 241 ---------LQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTG 300
                     QLLDAI+RHVPPPAAKLD+PFQMLVSMMERDFYLGRILTGRIA G++RTG
Sbjct: 241 DPPGELRNMSQLLDAIIRHVPPPAAKLDQPFQMLVSMMERDFYLGRILTGRIASGVVRTG 300

Query: 301 DRVHGLRVKDSGVEKIEEGKFYEVILSIKRGSI-----DAGAGDIVSMAGLAHPSIGHTV 360
           DRVHGLRVKDSGVEKIEEGK   V L  K+G+       AGAGDIVSMAGLA+PSIGHTV
Sbjct: 301 DRVHGLRVKDSGVEKIEEGKV--VKLMKKKGTTVVQIDSAGAGDIVSMAGLANPSIGHTV 360

Query: 361 ANVE---------------------------------LTGGKIGDRLMAEAETNLAINVL 374
           ANVE                                 LTGGKIGDRLMAEAETNLAINVL
Sbjct: 361 ANVEVSAALPTFELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNLAINVL 420

[Close]

BLAST of Carg27158-RA vs. TAIR 10
Match: AT2G31060.2 (elongation factor family protein )

HSP 1 Score: 488.0 bits (1255), Expect = 6.7e-138
Identity = 286/447 (63.98%), Postives = 311/447 (69.57%), Query Frame = 0


Query: 1   MAGPLLRCLWS-SSRRSISSSSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPSSD 60
           MAGPLLR LWS ++RRS SS S   K      S        R+FSAATA++AA  AP+S 
Sbjct: 1   MAGPLLRSLWSNTTRRSFSSHSSPSKFGYSLSS-------LRSFSAATASTAAAGAPNSS 60

Query: 61  LDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSV 120
           LDP+RLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSI+LERERGITI+SKVTS+
Sbjct: 61  LDPNRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSINLERERGITISSKVTSI 120

Query: 121 SWKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRP 180
            WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRP
Sbjct: 121 FWKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRP 180

Query: 181 LLLLNKVDRPSVTEERCNEVES--------------------WYSIYLQIWG-------- 240
           +LLLNKVDRPSVTEERC+EVES                     Y+   + W         
Sbjct: 181 ILLLNKVDRPSVTEERCDEVESLVFDLFANCGATEEQLDFPVLYASAKEGWASSTYTKDP 240

Query: 241 -------LQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIRTGDR 300
                    LLDA+VRHV PP A LDEPF MLVSMME+DFYLGRILTGR+  G++R GDR
Sbjct: 241 PVDAKNMADLLDAVVRHVQPPKANLDEPFLMLVSMMEKDFYLGRILTGRVTSGVVRVGDR 300

Query: 301 VHGLRVKDSGVEKIEEGKFYEVILSIKRG----SID-AGAGDIVSMAGLAHPSIGHTVAN 360
           V+GLR  DSG EKIEE K   V L  K+G    SID AGAGDI+ MAGL  PSIGHTVA+
Sbjct: 301 VNGLRKTDSGSEKIEEAKV--VKLMKKKGTTIVSIDAAGAGDIICMAGLTAPSIGHTVAS 360

Query: 361 VE---------------------------------LTGGKIGDRLMAEAETNLAINVLPG 374
            E                                 LTGG+IGDRLMAEAETNLAINV+PG
Sbjct: 361 AEVTTALPTVELDPPTISMTFGVNDSPLAGQDGTHLTGGRIGDRLMAEAETNLAINVIPG 420

[Close]

BLAST of Carg27158-RA vs. TAIR 10
Match: AT2G31060.3 (elongation factor family protein )

HSP 1 Score: 482.3 bits (1240), Expect = 3.7e-136
Identity = 286/451 (63.41%), Postives = 311/451 (68.96%), Query Frame = 0


Query: 1   MAGPLLRCLWS-SSRRSISSSSYHHKSHLITKSSVFPNLLARAFSAATATSAAGVAPSSD 60
           MAGPLLR LWS ++RRS SS S   K      S        R+FSAATA++AA  AP+S 
Sbjct: 1   MAGPLLRSLWSNTTRRSFSSHSSPSKFGYSLSS-------LRSFSAATASTAAAGAPNSS 60

Query: 61  LDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASK---- 120
           LDP+RLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSI+LERERGITI+SK    
Sbjct: 61  LDPNRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSINLERERGITISSKVSPF 120

Query: 121 VTSVSWKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY 180
           VTS+ WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY
Sbjct: 121 VTSIFWKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY 180

Query: 181 GLRPLLLLNKVDRPSVTEERCNEVES--------------------WYSIYLQIWG---- 240
           GLRP+LLLNKVDRPSVTEERC+EVES                     Y+   + W     
Sbjct: 181 GLRPILLLNKVDRPSVTEERCDEVESLVFDLFANCGATEEQLDFPVLYASAKEGWASSTY 240

Query: 241 -----------LQLLDAIVRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIACGIIR 300
                        LLDA+VRHV PP A LDEPF MLVSMME+DFYLGRILTGR+  G++R
Sbjct: 241 TKDPPVDAKNMADLLDAVVRHVQPPKANLDEPFLMLVSMMEKDFYLGRILTGRVTSGVVR 300

Query: 301 TGDRVHGLRVKDSGVEKIEEGKFYEVILSIKRG----SID-AGAGDIVSMAGLAHPSIGH 360
            GDRV+GLR  DSG EKIEE K   V L  K+G    SID AGAGDI+ MAGL  PSIGH
Sbjct: 301 VGDRVNGLRKTDSGSEKIEEAKV--VKLMKKKGTTIVSIDAAGAGDIICMAGLTAPSIGH 360

Query: 361 TVANVE---------------------------------LTGGKIGDRLMAEAETNLAIN 374
           TVA+ E                                 LTGG+IGDRLMAEAETNLAIN
Sbjct: 361 TVASAEVTTALPTVELDPPTISMTFGVNDSPLAGQDGTHLTGGRIGDRLMAEAETNLAIN 420

[Close]

BLAST of Carg27158-RA vs. TAIR 10
Match: AT2G31060.1 (elongation factor family protein )

HSP 1 Score: 287.3 bits (734), Expect = 1.7e-77
Identity = 174/300 (58.00%), Postives = 189/300 (63.00%), Query Frame = 0


Query: 147 MVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPLLLLNKVDRPSVTEERCNEVES----- 206
           MVEGAILVVDAGEGPLAQTKFVLAKALKYGLRP+LLLNKVDRPSVTEERC+EVES     
Sbjct: 1   MVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDRPSVTEERCDEVESLVFDL 60

Query: 207 ---------------WYSIYLQIWG---------------LQLLDAIVRHVPPPAAKLDE 266
                           Y+   + W                  LLDA+VRHV PP A LDE
Sbjct: 61  FANCGATEEQLDFPVLYASAKEGWASSTYTKDPPVDAKNMADLLDAVVRHVQPPKANLDE 120

Query: 267 PFQMLVSMMERDFYLGRILTGRIACGIIRTGDRVHGLRVKDSGVEKIEEGKFYEVILSIK 326
           PF MLVSMME+DFYLGRILTGR+  G++R GDRV+GLR  DSG EKIEE K   V L  K
Sbjct: 121 PFLMLVSMMEKDFYLGRILTGRVTSGVVRVGDRVNGLRKTDSGSEKIEEAKV--VKLMKK 180

Query: 327 RG----SID-AGAGDIVSMAGLAHPSIGHTVANVE------------------------- 374
           +G    SID AGAGDI+ MAGL  PSIGHTVA+ E                         
Sbjct: 181 KGTTIVSIDAAGAGDIICMAGLTAPSIGHTVASAEVTTALPTVELDPPTISMTFGVNDSP 240

[Close]

BLAST of Carg27158-RA vs. TAIR 10
Match: AT5G13650.2 (elongation factor family protein )

HSP 1 Score: 210.3 bits (534), Expect = 2.7e-54
Identity = 144/394 (36.55%), Postives = 210/394 (53.30%), Query Frame = 0


Query: 36  PNLLARAFSAATATSAAGVAPSSDLD-PSRLRNVAVIAHVDHGKTTLMDRLLRQCGA--- 95
           P  +  + S +TA  A+       LD    +RN+A++AHVDHGKTTL+D +LRQ      
Sbjct: 53  PRPITCSASPSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRD 112

Query: 96  -DIPHERAMDSISLERERGITIASKVTSVSWKDNELNMVDTPGHADFGGEVERVVGMVEG 155
             +  ER MDS  LERERGITI SK TS+++K+ ++N++DTPGH+DFGGEVERV+ MV+G
Sbjct: 113 NQVMQERIMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDG 172

Query: 156 AILVVDAGEGPLAQTKFVLAKALKYGLRPLLLLNKVDRPS------------------VT 215
            +LVVD+ EGP+ QT+FVL KAL++G   ++++NK+DRPS                   T
Sbjct: 173 VLLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPEFVVNSTFELFIELNAT 232

Query: 216 EERCNEVESWYSIYLQIWGLQ----------LLDAIVRHVPPPAAKLDEPFQMLVSMMER 275
           +E+C+    + S      GL           L +AI+R VP P  + D   QML + +E 
Sbjct: 233 DEQCDFQAIYASGIKGKAGLSPDDLAEDLGPLFEAIIRCVPGPNIEKDGALQMLATNIEY 292

Query: 276 DFYLGRILTGRIACGIIRTGDRVHGLRVKDS-GVEKIEEGKFYEVILSIKRGSIDAGAGD 335
           D + GRI  GR+  G++R G  V     +DS    ++ E   YE    +   S++  AGD
Sbjct: 293 DEHKGRIAIGRLHAGVLRKGMDVRVCTSEDSCRFARVSELFVYEKFYRVPTDSVE--AGD 352

Query: 336 IVSMAGLAHPSIGHTVAN-----------VE----------------------LTGGKIG 362
           I ++ G+ +  IG T+A+           VE                      +T   + 
Sbjct: 353 ICAVCGIDNIQIGETIADKVHGKPLPTIKVEEPTVKMSFSVNTSPFSGREGKYVTSRNLR 412

[Close]

BLAST of Carg27158-RA vs. TAIR 10
Match: AT5G13650.1 (elongation factor family protein )

HSP 1 Score: 209.5 bits (532), Expect = 4.6e-54
Identity = 143/393 (36.39%), Postives = 209/393 (53.18%), Query Frame = 0


Query: 36  PNLLARAFSAATATSAAGVAPSSDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGA---- 95
           P  +  + S +TA  A+ V          +RN+A++AHVDHGKTTL+D +LRQ       
Sbjct: 53  PRPITCSASPSTAEPASEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDN 112

Query: 96  DIPHERAMDSISLERERGITIASKVTSVSWKDNELNMVDTPGHADFGGEVERVVGMVEGA 155
            +  ER MDS  LERERGITI SK TS+++K+ ++N++DTPGH+DFGGEVERV+ MV+G 
Sbjct: 113 QVMQERIMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGV 172

Query: 156 ILVVDAGEGPLAQTKFVLAKALKYGLRPLLLLNKVDRPS------------------VTE 215
           +LVVD+ EGP+ QT+FVL KAL++G   ++++NK+DRPS                   T+
Sbjct: 173 LLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPEFVVNSTFELFIELNATD 232

Query: 216 ERCNEVESWYSIYLQIWGLQ----------LLDAIVRHVPPPAAKLDEPFQMLVSMMERD 275
           E+C+    + S      GL           L +AI+R VP P  + D   QML + +E D
Sbjct: 233 EQCDFQAIYASGIKGKAGLSPDDLAEDLGPLFEAIIRCVPGPNIEKDGALQMLATNIEYD 292

Query: 276 FYLGRILTGRIACGIIRTGDRVHGLRVKDS-GVEKIEEGKFYEVILSIKRGSIDAGAGDI 335
            + GRI  GR+  G++R G  V     +DS    ++ E   YE    +   S++  AGDI
Sbjct: 293 EHKGRIAIGRLHAGVLRKGMDVRVCTSEDSCRFARVSELFVYEKFYRVPTDSVE--AGDI 352

Query: 336 VSMAGLAHPSIGHTVAN-----------VE----------------------LTGGKIGD 362
            ++ G+ +  IG T+A+           VE                      +T   + D
Sbjct: 353 CAVCGIDNIQIGETIADKVHGKPLPTIKVEEPTVKMSFSVNTSPFSGREGKYVTSRNLRD 412

The following BLAST results are available for this feature:

BLAST of Carg27158-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022844.1	9.5e-211	100.00	typA, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589143.1	5.1e-172	77.13	hypothetical protein SDJN03_17708, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022930818.1	5.1e-172	77.13	uncharacterized protein LOC111437186 [Cucurbita moschata]	[more]
XP_023531409.1	1.5e-171	76.91	uncharacterized protein LOC111793657 [Cucurbita pepo subsp. pepo]	[more]
XP_022988705.1	7.3e-171	76.68	uncharacterized protein LOC111485959 [Cucurbita maxima]	[more]

BLAST of Carg27158-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P72749	2.3e-58	40.54	50S ribosomal subunit assembly factor BipA OS=Synechocystis sp. (strain PCC 6803...	[more]
P44910	2.0e-54	37.43	50S ribosomal subunit assembly factor BipA OS=Haemophilus influenzae (strain ATC...	[more]
O25225	5.8e-54	36.24	50S ribosomal subunit assembly factor BipA OS=Helicobacter pylori (strain ATCC 7...	[more]
Q9ZLZ3	1.0e-53	35.97	50S ribosomal subunit assembly factor BipA OS=Helicobacter pylori (strain J99 / ...	[more]
P0A3B2	2.2e-53	39.05	50S ribosomal subunit assembly factor BipA OS=Escherichia coli O127:H6 (strain E...	[more]

BLAST of Carg27158-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWG9	2.5e-172	77.13	uncharacterized protein LOC111437186 OS=Cucurbita moschata OX=3662 GN=LOC1114371...	[more]
A0A6J1JKB6	3.6e-171	76.68	uncharacterized protein LOC111485959 OS=Cucurbita maxima OX=3661 GN=LOC111485959...	[more]
A0A0A0K3E9	1.7e-160	72.61	Tr-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G041340 P...	[more]
A0A5A7UZY6	1.6e-158	72.38	GTP-binding protein TypA/BipA-like protein OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3C0Z9	3.5e-158	72.16	GTP-binding protein TypA/BipA homolog OS=Cucumis melo OX=3656 GN=LOC103495631 PE...	[more]

BLAST of Carg27158-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31060.2	6.7e-138	63.98	elongation factor family protein	[more]
AT2G31060.3	3.7e-136	63.41	elongation factor family protein	[more]
AT2G31060.1	1.7e-77	58.00	elongation factor family protein	[more]
AT5G13650.2	2.7e-54	36.55	elongation factor family protein	[more]
AT5G13650.1	4.6e-54	36.39	elongation factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000795	Translational (tr)-type GTP-binding domain	PRINTS	PR00315	ELONGATNFCT	coord: 127..137 score: 61.3 coord: 107..115 score: 62.42 coord: 143..154 score: 31.8 coord: 179..188 score: 36.35 coord: 67..80 score: 66.98
IPR000795	Translational (tr)-type GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 64..200 e-value: 3.6E-46 score: 157.2
IPR000795	Translational (tr)-type GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 63..226 score: 45.77816
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 227..324 e-value: 6.3E-17 score: 63.3
None	No IPR available	PANTHER	PTHR42908:SF25	ELONGATION FACTOR FAMILY PROTEIN	coord: 6..200
None	No IPR available	PANTHER	PTHR42908:SF25	ELONGATION FACTOR FAMILY PROTEIN	coord: 321..367 coord: 213..322
None	No IPR available	PANTHER	PTHR42908	TRANSLATION ELONGATION FACTOR-RELATED	coord: 6..200
None	No IPR available	PANTHER	PTHR42908	TRANSLATION ELONGATION FACTOR-RELATED	coord: 321..367 coord: 213..322
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 57..214 e-value: 4.9E-49 score: 169.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 61..235
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 66..199 e-value: 8.7E-19 score: 65.9
IPR031157	Tr-type G domain, conserved site	PROSITE	PS00301	G_TR_1	coord: 100..115
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 213..321

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg27158	Carg27158	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27158-RA:9	Carg27158-RA:9	exon
Carg27158-RA:8	Carg27158-RA:8	exon
Carg27158-RA:7	Carg27158-RA:7	exon
Carg27158-RA:6	Carg27158-RA:6	exon
Carg27158-RA:5	Carg27158-RA:5	exon
Carg27158-RA:4	Carg27158-RA:4	exon
Carg27158-RA:3	Carg27158-RA:3	exon
Carg27158-RA:2	Carg27158-RA:2	exon
Carg27158-RA:1	Carg27158-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27158-RA:cds	Carg27158-RA:cds_9	CDS
Carg27158-RA:cds	Carg27158-RA:cds_8	CDS
Carg27158-RA:cds	Carg27158-RA:cds_7	CDS
Carg27158-RA:cds	Carg27158-RA:cds_6	CDS
Carg27158-RA:cds	Carg27158-RA:cds_5	CDS
Carg27158-RA:cds	Carg27158-RA:cds_4	CDS
Carg27158-RA:cds	Carg27158-RA:cds_3	CDS
Carg27158-RA:cds	Carg27158-RA:cds_2	CDS
Carg27158-RA:cds	Carg27158-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg27158-RA	Carg27158-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding