Carg24285-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg24285-RA
TypemRNA
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr15: 462408 .. 465346 (+)
Sequence length2013
RNA-Seq ExpressionCarg24285-RA
SyntenyCarg24285-RA
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACCACATTTACAAGAATTGGCTACTCGAGTGAGCAGAACCATACTATCAATTTCAAATCACACAAGGCCGGCTGGATCATGGACCCCTTCACTGGAGCAGAATTTGCATCGACTCGGTTTCCGCGAAACGCTAAATCCATCGCTTGTCTCTCAAGTCATCGACCCTCATCTTCTCAGTCATCACTCCCTCGCTCTCGGTTTCTTCAATTGGGCTTCTCAGCAACCAGGTTTCGCCCACAATTCTGAATCCTATAAGTCGGTTCTCAAGTCTCTCTCTCTTTCACGCCAATTTGGGGCCATTCATAGCCTCTTGAAACAGGTAAAAACTCAGAGAATTGGTCTCGATTTATCTGTTTATCACTCTGTTATTGATTCGTTGATCATTGGCAAGAAAACACATGATGCTTTTCTGGTTTTTAAGGAGCTTACTTCAGTTACTCACGTTATTGGATCCGAACCATGTAATTCGCTTTTGGCTGCTCTTGCTTCTGATGGGTTTTTTGAGCATGCCCAGAAAGTGTTCGATGAAATGTCTCTTAAAGGCATTCCTTTCAACACTCTTGGATTTGGTGTGTTTATATGGAGGGTTTGTAGAAACGCTGATGTAGTTAAAGTTTTGAACATGCTAGATGATGCTATGACCAATAATTCGGAGATCAATGGGTCTGTCGTTGCCACGCTGATCATTCATGGGCTCTGTGGGGCATCTAGACTTTCAGAAGCTTCAAATATTTTGGATGAGCTTAAGAACAGGGGTTGTAAGCCTGACTTTTTGACGTATTGGATTCTTGGAGAAGCATATCAGTCAGCAGGGAGTGTGGTTGATAGGGAGAAAACCCTGAAGAAGAAGAGAAAGTTGGGGGTAGCTCCAAGGCTTCATGATTATAAGGAGTTCTTATTTGCTTTAATAGCTGGGAGACGGATATGTGAAGCTAAAGAGTTAGGTGAAGTTATTGTGAGAGGAAATTTTCCTATGGATGAAGATGTTTCTAATGTGCTGATAGGATCAGTCGCTGCCATTGATCCTTCCTCTGCTATTATGTTCTTGAAGTTGATGGTCGAGAAAGAGCGATTCCCCACTCTCCTGACTTTAAGAAATCTGAGTAGGAATCTATGCAAGCATGGAAAGCTTGACGAACTGTTGGAAGTTTATCAACTTCTGAGTAAACATAATTACTTCGATGATTATGATAGATATCATTTAAGAATTTCTTTCTTATGCAAGGCTGGAATGGTGAAAGAGGCCTATGGTGTTCTGCAGGAGATGAAGAAAAATGGGTTTGCCCCCGATGTATACTTTTACAATTCTGTGCTAGAAGCATGTTGTAGAGAAGATCTACTTCGGCCTGCTAGGAAGCTGTGGGATGAGATGTTTGCCAGTGGCTGTGGAGGTAACTTAAAGACGTATAACATCCTCATTCAAAAGTTTTCGAAATCCAATCAGATGGAGGAAGCTTTGGTGCTCTACCGTCATATGCTTGGAAAAAAGGTGGAACCTGACATTACAATCTACACGTCCCTGCTTCAAGGGCTCTGTCAGGAATCACAACTGGAAGCTGCTTTTGAAGTGTTTAGCAAGTGTGTTGAACAGGATGTAGATCTTGCGGGAACCTTGCTGAGCACTTTTATCCTGTGTCTGTGTAAAGCAGGCAAGTCACTTCTCTGGTTAATTCTTGTGTGCTTGTTTTATGCTTCTAGTTTGGAGTCATTTGTTTCTCACATAACAAGTCCCATAGGCACCGCCATACTTGACCCTTTACAAAACCTCTTCTATGGCCCAAATCACTCTCTCCTGGGTTATCTGTTGGATAACACCCTTCATTAACAACCAAAGCCATGGTTGACCCTGACCCTGACCCTGTAATATCTATCGGCTAAATCATTTTCTTTTGGAGTTATATGAGATCACACATCGGTTGGAGAGAGAACGAAATATTCCTTATAAGGATGTGGAAACCTCTCCCTAACATATGTGTTTTAAAACCTTAAGGAGAAGCCTGAAAGGGACTGCCCAAAGAAGGCAATATCTGCTAGCGATGGATCTGAGTGGTTAAGAATGGTATCAGAGCCAGACACCAGGCAGTGTGTCAGCGAGGACATCGAGCCCCAAAGGGGGGTGGACACCGGGCGCTGTGTCAACAAGACGCTAGACCCTGAAAGAGGTGGATTGTGAGATCCCACATAGATTGGAGAAGGGAAAGCTAGTGCCAACGAGGACGCTTGGCCCTGAAGCAGGTGGATTGTGAGATCCCACATCAGTTGGAGAGAGGATCAGAATAAACCTCTCCCCACAGCTCTCTCTAGCAGATGCGTTTTAAAACCTTGAGAAAAAGTCTAAAAAAGACAATATCGGCCTGAGCCCAAACCTGGGGTTATAGGTTATCTCTTAGATTACACCCATTTGTTACCTAGACCCTGTTCATAAACAACCAAAGCCATTGTTGACCCTGTAACATCCTCACTTCTATTGGCCAAATCACTCTCTTTGGAGTTATCTCTTCGACTACACCCTTGTCGGCTATGTTGCCTTACACTCATCTGAATTAGCAGTGTCCACATCGAGCTTCCTTGCCTCTTTTTGTCCTACAAAGAGTCCTGTAGGACCAGAAAACGGTTCTGTATTCAATATTTTCATTTAATTTAGCTTGGGTTCAAAACACTGCAGGTCATTTCCTTGCTGCTTCCAAATTACTCCGTGGTCTCACAAGCGACATTGCTCACCCAGACTCCCACGTAACTTTACTGAAAGGTTTTGCAGATGCTGGAGAGGTTCCACTTGCTAAGCAACATGTGGAGTGGGTTCAAGAAACCTCTCCATCAATGTTGTCTGTTATATCCAGTGAGTTATTAGCATTTCTTCCTTCCTCTCCAAAAGCAGATCCAATTTTACAGATTCTTCAAACAATACAAGAACTATCACGTTTCAACAATTGA

mRNA sequence

ATGAAACCACATTTACAAGAATTGGCTACTCGAGTGAGCAGAACCATACTATCAATTTCAAATCACACAAGGCCGGCTGGATCATGGACCCCTTCACTGGAGCAGAATTTGCATCGACTCGGTTTCCGCGAAACGCTAAATCCATCGCTTGTCTCTCAAGTCATCGACCCTCATCTTCTCAGTCATCACTCCCTCGCTCTCGGTTTCTTCAATTGGGCTTCTCAGCAACCAGGTTTCGCCCACAATTCTGAATCCTATAAGTCGGTTCTCAAGTCTCTCTCTCTTTCACGCCAATTTGGGGCCATTCATAGCCTCTTGAAACAGGTAAAAACTCAGAGAATTGGTCTCGATTTATCTGTTTATCACTCTGTTATTGATTCGTTGATCATTGGCAAGAAAACACATGATGCTTTTCTGGTTTTTAAGGAGCTTACTTCAGTTACTCACGTTATTGGATCCGAACCATGTAATTCGCTTTTGGCTGCTCTTGCTTCTGATGGGTTTTTTGAGCATGCCCAGAAAGTGTTCGATGAAATGTCTCTTAAAGGCATTCCTTTCAACACTCTTGGATTTGGTGTGTTTATATGGAGGGTTTGTAGAAACGCTGATGTAGTTAAAGTTTTGAACATGCTAGATGATGCTATGACCAATAATTCGGAGATCAATGGGTCTGTCGTTGCCACGCTGATCATTCATGGGCTCTGTGGGGCATCTAGACTTTCAGAAGCTTCAAATATTTTGGATGAGCTTAAGAACAGGGGTTGTAAGCCTGACTTTTTGACGTATTGGATTCTTGGAGAAGCATATCAGTCAGCAGGGAGTGTGGTTGATAGGGAGAAAACCCTGAAGAAGAAGAGAAAGTTGGGGGTAGCTCCAAGGCTTCATGATTATAAGGAGTTCTTATTTGCTTTAATAGCTGGGAGACGGATATGTGAAGCTAAAGAGTTAGGTGAAGTTATTGTGAGAGGAAATTTTCCTATGGATGAAGATGTTTCTAATGTGCTGATAGGATCAGTCGCTGCCATTGATCCTTCCTCTGCTATTATGTTCTTGAAGTTGATGGTCGAGAAAGAGCGATTCCCCACTCTCCTGACTTTAAGAAATCTGAGTAGGAATCTATGCAAGCATGGAAAGCTTGACGAACTGTTGGAAGTTTATCAACTTCTGAGTAAACATAATTACTTCGATGATTATGATAGATATCATTTAAGAATTTCTTTCTTATGCAAGGCTGGAATGGTGAAAGAGGCCTATGGTGTTCTGCAGGAGATGAAGAAAAATGGGTTTGCCCCCGATGTATACTTTTACAATTCTGTGCTAGAAGCATGTTGTAGAGAAGATCTACTTCGGCCTGCTAGGAAGCTGTGGGATGAGATGTTTGCCAGTGGCTGTGGAGGTAACTTAAAGACGTATAACATCCTCATTCAAAAGTTTTCGAAATCCAATCAGATGGAGGAAGCTTTGGTGCTCTACCGTCATATGCTTGGAAAAAAGGTGGAACCTGACATTACAATCTACACGTCCCTGCTTCAAGGGCTCTGTCAGGAATCACAACTGGAAGCTGCTTTTGAAGTGTTTAGCAAGTGTGTTGAACAGGATGTAGATCTTGCGGGAACCTTGCTGAGCACTTTTATCCTGTGTCTGTGTAAAGCAGGCAAGTCACTTCTCTGGTTAATTCTTGACCAGAAAACGGTTCTGTATTCAATATTTTCATTTAATTTAGCTTGGGTTCAAAACACTGCAGGTCATTTCCTTGCTGCTTCCAAATTACTCCGTGGTCTCACAAGCGACATTGCTCACCCAGACTCCCACGTAACTTTACTGAAAGGTTTTGCAGATGCTGGAGAGGTTCCACTTGCTAAGCAACATGTGGAGTGGGTTCAAGAAACCTCTCCATCAATGTTGTCTGTTATATCCAGTGAGTTATTAGCATTTCTTCCTTCCTCTCCAAAAGCAGATCCAATTTTACAGATTCTTCAAACAATACAAGAACTATCACGTTTCAACAATTGA

Coding sequence (CDS)

ATGAAACCACATTTACAAGAATTGGCTACTCGAGTGAGCAGAACCATACTATCAATTTCAAATCACACAAGGCCGGCTGGATCATGGACCCCTTCACTGGAGCAGAATTTGCATCGACTCGGTTTCCGCGAAACGCTAAATCCATCGCTTGTCTCTCAAGTCATCGACCCTCATCTTCTCAGTCATCACTCCCTCGCTCTCGGTTTCTTCAATTGGGCTTCTCAGCAACCAGGTTTCGCCCACAATTCTGAATCCTATAAGTCGGTTCTCAAGTCTCTCTCTCTTTCACGCCAATTTGGGGCCATTCATAGCCTCTTGAAACAGGTAAAAACTCAGAGAATTGGTCTCGATTTATCTGTTTATCACTCTGTTATTGATTCGTTGATCATTGGCAAGAAAACACATGATGCTTTTCTGGTTTTTAAGGAGCTTACTTCAGTTACTCACGTTATTGGATCCGAACCATGTAATTCGCTTTTGGCTGCTCTTGCTTCTGATGGGTTTTTTGAGCATGCCCAGAAAGTGTTCGATGAAATGTCTCTTAAAGGCATTCCTTTCAACACTCTTGGATTTGGTGTGTTTATATGGAGGGTTTGTAGAAACGCTGATGTAGTTAAAGTTTTGAACATGCTAGATGATGCTATGACCAATAATTCGGAGATCAATGGGTCTGTCGTTGCCACGCTGATCATTCATGGGCTCTGTGGGGCATCTAGACTTTCAGAAGCTTCAAATATTTTGGATGAGCTTAAGAACAGGGGTTGTAAGCCTGACTTTTTGACGTATTGGATTCTTGGAGAAGCATATCAGTCAGCAGGGAGTGTGGTTGATAGGGAGAAAACCCTGAAGAAGAAGAGAAAGTTGGGGGTAGCTCCAAGGCTTCATGATTATAAGGAGTTCTTATTTGCTTTAATAGCTGGGAGACGGATATGTGAAGCTAAAGAGTTAGGTGAAGTTATTGTGAGAGGAAATTTTCCTATGGATGAAGATGTTTCTAATGTGCTGATAGGATCAGTCGCTGCCATTGATCCTTCCTCTGCTATTATGTTCTTGAAGTTGATGGTCGAGAAAGAGCGATTCCCCACTCTCCTGACTTTAAGAAATCTGAGTAGGAATCTATGCAAGCATGGAAAGCTTGACGAACTGTTGGAAGTTTATCAACTTCTGAGTAAACATAATTACTTCGATGATTATGATAGATATCATTTAAGAATTTCTTTCTTATGCAAGGCTGGAATGGTGAAAGAGGCCTATGGTGTTCTGCAGGAGATGAAGAAAAATGGGTTTGCCCCCGATGTATACTTTTACAATTCTGTGCTAGAAGCATGTTGTAGAGAAGATCTACTTCGGCCTGCTAGGAAGCTGTGGGATGAGATGTTTGCCAGTGGCTGTGGAGGTAACTTAAAGACGTATAACATCCTCATTCAAAAGTTTTCGAAATCCAATCAGATGGAGGAAGCTTTGGTGCTCTACCGTCATATGCTTGGAAAAAAGGTGGAACCTGACATTACAATCTACACGTCCCTGCTTCAAGGGCTCTGTCAGGAATCACAACTGGAAGCTGCTTTTGAAGTGTTTAGCAAGTGTGTTGAACAGGATGTAGATCTTGCGGGAACCTTGCTGAGCACTTTTATCCTGTGTCTGTGTAAAGCAGGCAAGTCACTTCTCTGGTTAATTCTTGACCAGAAAACGGTTCTGTATTCAATATTTTCATTTAATTTAGCTTGGGTTCAAAACACTGCAGGTCATTTCCTTGCTGCTTCCAAATTACTCCGTGGTCTCACAAGCGACATTGCTCACCCAGACTCCCACGTAACTTTACTGAAAGGTTTTGCAGATGCTGGAGAGGTTCCACTTGCTAAGCAACATGTGGAGTGGGTTCAAGAAACCTCTCCATCAATGTTGTCTGTTATATCCAGTGAGTTATTAGCATTTCTTCCTTCCTCTCCAAAAGCAGATCCAATTTTACAGATTCTTCAAACAATACAAGAACTATCACGTTTCAACAATTGA

Protein sequence

MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLLSHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSVYHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMSLKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRLSEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEFLFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERFPTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSKSNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTLLSTFILCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAHPDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQTIQELSRFNN
Homology
BLAST of Carg24285-RA vs. NCBI nr
Match: KAG7015944.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1332.8 bits (3448), Expect = 0.0e+00
Identity = 670/670 (100.00%), Postives = 670/670 (100.00%), Query Frame = 0

Query: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60
           MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120
           SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120

Query: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180
           YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS
Sbjct: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240
           LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300
           SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF
Sbjct: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360
           LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480

Query: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540
           SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540

Query: 541 LSTFILCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAH 600
           LSTFILCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAH
Sbjct: 541 LSTFILCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAH 600

Query: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 660
           PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ
Sbjct: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 660

Query: 661 TIQELSRFNN 671
           TIQELSRFNN
Sbjct: 661 TIQELSRFNN 670

BLAST of Carg24285-RA vs. NCBI nr
Match: KAG6578360.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1256.9 bits (3251), Expect = 0.0e+00
Identity = 639/670 (95.37%), Postives = 639/670 (95.37%), Query Frame = 0

Query: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60
           MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120
           SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120

Query: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180
           YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS
Sbjct: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240
           LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300
           SEASNILDELKNRGCKPDFLTYWILGEAYQS GSVVDREKTLKKKRKLGVAPRLHDYKEF
Sbjct: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSVGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360
           LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480

Query: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540
           SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540

Query: 541 LSTFILCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAH 600
           LSTFILCLCK                              AGHFLAASKLLRGLTSDIAH
Sbjct: 541 LSTFILCLCK------------------------------AGHFLAASKLLRGLTSDIAH 600

Query: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 660
           PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ
Sbjct: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 640

Query: 661 TIQELSRFNN 671
           TIQELSRFNN
Sbjct: 661 TIQELSRFNN 640

BLAST of Carg24285-RA vs. NCBI nr
Match: XP_022939514.1 (pentatricopeptide repeat-containing protein At5g14080 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1253.4 bits (3242), Expect = 0.0e+00
Identity = 638/670 (95.22%), Postives = 638/670 (95.22%), Query Frame = 0

Query: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60
           MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120
           SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120

Query: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180
           YHSVIDSLIIGKKTHDAFLVFKELTSVT VIGSEPCNSLLAALASDGFFEHAQKVFDEMS
Sbjct: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTRVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240
           LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300
            EASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF
Sbjct: 241 PEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360
           LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480

Query: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540
           SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540

Query: 541 LSTFILCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAH 600
           LSTFILCLCK                              AGHFLAASKLLRGLTSDIAH
Sbjct: 541 LSTFILCLCK------------------------------AGHFLAASKLLRGLTSDIAH 600

Query: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 660
           PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ
Sbjct: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 640

Query: 661 TIQELSRFNN 671
           TIQELSRFNN
Sbjct: 661 TIQELSRFNN 640

BLAST of Carg24285-RA vs. NCBI nr
Match: XP_023550678.1 (pentatricopeptide repeat-containing protein At5g14080 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1247.3 bits (3226), Expect = 0.0e+00
Identity = 632/670 (94.33%), Postives = 638/670 (95.22%), Query Frame = 0

Query: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60
           MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120
           SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLS QFGAIHSLLKQVKTQRIGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSCQFGAIHSLLKQVKTQRIGLDLSV 120

Query: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180
           YHSVIDSLIIGKKTHDAFLVFKE+TSVTHVIGSEPCNSLLAALASDGFF+HAQKVFDEMS
Sbjct: 121 YHSVIDSLIIGKKTHDAFLVFKEVTSVTHVIGSEPCNSLLAALASDGFFDHAQKVFDEMS 180

Query: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240
           LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300
           SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF
Sbjct: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360
           LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKHGK+DELLEVYQ+LSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKIDELLEVYQVLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNIL+QKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILVQKFSK 480

Query: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540
           SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDV+LAGTL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVNLAGTL 540

Query: 541 LSTFILCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAH 600
           LSTFILCLCK                              AGHFLAASKLLRGLTSDIAH
Sbjct: 541 LSTFILCLCK------------------------------AGHFLAASKLLRGLTSDIAH 600

Query: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 660
           PDSH TLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ
Sbjct: 601 PDSHATLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 640

Query: 661 TIQELSRFNN 671
           TIQELSRFNN
Sbjct: 661 TIQELSRFNN 640

BLAST of Carg24285-RA vs. NCBI nr
Match: XP_022992821.1 (pentatricopeptide repeat-containing protein At5g14080 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1236.1 bits (3197), Expect = 0.0e+00
Identity = 627/670 (93.58%), Postives = 633/670 (94.48%), Query Frame = 0

Query: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60
           MKPHLQELATRVSRT+LSISNHT PAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTVLSISNHTSPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120
           SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIH LLKQVKTQRIGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHCLLKQVKTQRIGLDLSV 120

Query: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180
           YHSVIDSLIIGKKTHDAFLVFKE+TSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS
Sbjct: 121 YHSVIDSLIIGKKTHDAFLVFKEVTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240
           LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300
           SEASNILDELKNRGCKPDFLTYWILGEAY+ AGSVVDREKTLKKKRKLGVAPRLHDYKEF
Sbjct: 241 SEASNILDELKNRGCKPDFLTYWILGEAYRLAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360
           LFALIAGRRICEAKELGEVIVR NFPMDEDVSNVLIGSVAAIDPSSAIMFL  MVEKERF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRANFPMDEDVSNVLIGSVAAIDPSSAIMFLMFMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKHGKLDELLEVYQ+LSKHNYFDDYDRY LRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQVLSKHNYFDDYDRYRLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNIL+QKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILVQKFSK 480

Query: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540
           SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDV+LAGTL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVNLAGTL 540

Query: 541 LSTFILCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAH 600
           LSTFILCLCK                              AGHFLAASKLLRGLTSDIAH
Sbjct: 541 LSTFILCLCK------------------------------AGHFLAASKLLRGLTSDIAH 600

Query: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 660
           PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ
Sbjct: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 640

Query: 661 TIQELSRFNN 671
           TIQELSRFNN
Sbjct: 661 TIQELSRFNN 640

BLAST of Carg24285-RA vs. ExPASy Swiss-Prot
Match: Q9FMU2 (Pentatricopeptide repeat-containing protein At5g14080 OS=Arabidopsis thaliana OX=3702 GN=At5g14080 PE=2 SV=2)

HSP 1 Score: 641.3 bits (1653), Expect = 1.2e-182
Identity = 325/658 (49.39%), Postives = 447/658 (67.93%), Query Frame = 0

Query: 7   ELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLLSHHSLA 66
           ELA R+ R +L +S  +R A  W+P +EQ+LH LGFR +++PSLV++VIDP LL+HHSLA
Sbjct: 6   ELAVRIGRELLKVSGSSRAARIWSPLIEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLA 65

Query: 67  LGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSVYHSVID 126
           LGFFNWA+QQPG++H+S SY S+ KSLSLSRQF A+ +L KQVK+ +I LD SVY S+ID
Sbjct: 66  LGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLID 125

Query: 127 SLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMSLKGIPF 186
           +L++G+K   AF V +E  S    I  + CN LLA L SDG +++AQK+F +M  KG+  
Sbjct: 126 TLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSL 185

Query: 187 NTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRLSEASNI 246
           NTLGFGV+I   CR+++  ++L ++D+    N  INGS++A LI+H LC  SR  +A  I
Sbjct: 186 NTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYI 245

Query: 247 LDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEFLFALIA 306
           L+EL+N  CKPDF+ Y ++ EA+   G++ +R+  LKKKRKLGVAPR  DY+ F+  LI+
Sbjct: 246 LEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLIS 305

Query: 307 GRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERFPTLLTL 366
            +R+ EAKE+ EVIV G FPMD D+ + LIGSV+A+DP SA+ FL  MV   + P + TL
Sbjct: 306 AKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTL 365

Query: 367 RNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGVLQEMKK 426
             LS+NLC+H K D L++ Y+LLS   YF +   Y L ISFLCKAG V+E+Y  LQEMKK
Sbjct: 366 SKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKK 425

Query: 427 NGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSKSNQMEE 486
            G APDV  YN+++EACC+ +++RPA+KLWDEMF  GC  NL TYN+LI+K S+  + EE
Sbjct: 426 EGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEE 485

Query: 487 ALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQD-VDLAGTLLSTFI 546
           +L L+  ML + +EPD TIY SL++GLC+E+++EAA EVF KC+E+D   +   +LS F+
Sbjct: 486 SLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFV 545

Query: 547 LCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAHPDSHV 606
           L LC                              + GH   AS+LLR     + H  +HV
Sbjct: 546 LNLC------------------------------SNGHSGEASQLLRE-REHLEHTGAHV 605

Query: 607 TLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQTIQ 664
            LLK  ADA EV +  +H++W++E SPS++  ISS+LLA   SS   D IL  ++ I+
Sbjct: 606 VLLKCVADAKEVEIGIRHMQWIKEVSPSLVHTISSDLLASFCSSSDPDSILPFIRAIE 632

BLAST of Carg24285-RA vs. ExPASy Swiss-Prot
Match: Q9FIT7 (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.5e-39
Identity = 116/464 (25.00%), Postives = 213/464 (45.91%), Query Frame = 0

Query: 85  SYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSVYHSVIDSLIIGKKTHDAFLVFKEL 144
           +Y  ++  L   ++     SLL ++ +  + LD   Y  +ID L+ G+    A  +  E+
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338

Query: 145 TSVTHVIGSEP--CNSLLAALASDGFFEHAQKVFDEMSLKGIPFNTLGFGVFIWRVCRNA 204
             V+H I  +P   +  +  ++ +G  E A+ +FD M   G+      +   I   CR  
Sbjct: 339 --VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 398

Query: 205 DVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRLSEASNILDELKNRGCKPDFLTY 264
           +V +   +L +    N  I+     T ++ G+C +  L  A NI+ E+   GC+P+ + Y
Sbjct: 399 NVRQGYELLVEMKKRNIVISPYTYGT-VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIY 458

Query: 265 WILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEFLFALIAGRRICEAKE-LGEVIV 324
             L + +       D  + LK+ ++ G+AP +  Y   +  L   +R+ EA+  L E++ 
Sbjct: 459 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 518

Query: 325 RGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERFPTLLTLRNLSRNLCKHGKLDE 384
            G  P        + G + A + +SA  ++K M E    P  +    L    CK GK+ E
Sbjct: 519 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 578

Query: 385 LLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFAPDVYFYNSVLE 444
               Y+ +       D   Y + ++ L K   V +A  + +EM+  G APDV+ Y  ++ 
Sbjct: 579 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 638

Query: 445 ACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSKSNQMEEALVLYRHMLGKKVEP 504
              +   ++ A  ++DEM   G   N+  YN+L+  F +S ++E+A  L   M  K + P
Sbjct: 639 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 698

Query: 505 DITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTLLSTFI 546
           +   Y +++ G C+   L  AF +F      ++ L G +  +F+
Sbjct: 699 NAVTYCTIIDGYCKSGDLAEAFRLF-----DEMKLKGLVPDSFV 734

BLAST of Carg24285-RA vs. ExPASy Swiss-Prot
Match: Q9M9X9 (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g06710 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.4e-37
Identity = 126/507 (24.85%), Postives = 228/507 (44.97%), Query Frame = 0

Query: 42  FRETLNPSLVSQVIDPHLLSHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGA 101
           FRE L+ SLV +V+   L++  S  + FF WA +Q G+ H +  Y +++  +        
Sbjct: 126 FREKLSESLVIEVL--RLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKV 185

Query: 102 IHSLLKQVKTQRIGLDLSVYHSVIDSLIIGKKTHDAFLVFKE----LTSVTHVIGSEPCN 161
               L+Q++      D  V+   ++ L+     + +F +  E    L            N
Sbjct: 186 PEEFLQQIRDD----DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN 245

Query: 162 SLLAALASDGFFEHAQKVFDEMSLKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTN 221
            L+ A       + A  +  EMSL  +  +      F + +C+     + L +++     
Sbjct: 246 CLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE----T 305

Query: 222 NSEINGSVVATLIIHGLCGASRLSEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVD 281
            + +  +V  T +I GLC AS   EA + L+ ++   C P+ +TY  L     +   +  
Sbjct: 306 ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGR 365

Query: 282 REKTLKKKRKLGVAPRLHDYKEFLFA-LIAGRRICEAKELGEVIVRGNFPMDEDVSNVLI 341
            ++ L      G  P    +   + A   +G      K L +++  G+ P    V N+LI
Sbjct: 366 CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP-GYVVYNILI 425

Query: 342 GSVAAIDPSSAIMFLKLMVEKERFPTL--------LTLRNLSRNLCKHGKLDELLEVYQL 401
           GS+   D  S    L  + EK     L        + + + +R LC  GK ++   V + 
Sbjct: 426 GSICG-DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 485

Query: 402 LSKHNYFDDYDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFAPDVYFYNSVLEACCREDL 461
           +    +  D   Y   +++LC A  ++ A+ + +EMK+ G   DVY Y  ++++ C+  L
Sbjct: 486 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 545

Query: 462 LRPARKLWDEMFASGCGGNLKTYNILIQKFSKSNQMEEALVLYRHMLGKKVEPDITIYTS 521
           +  ARK ++EM   GC  N+ TY  LI  + K+ ++  A  L+  ML +   P+I  Y++
Sbjct: 546 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 605

Query: 522 LLQGLCQESQLEAAFEVFSK-CVEQDV 535
           L+ G C+  Q+E A ++F + C  +DV
Sbjct: 606 LIDGHCKAGQVEKACQIFERMCGSKDV 620

BLAST of Carg24285-RA vs. ExPASy Swiss-Prot
Match: Q9ZVX5 (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX=3702 GN=At2g16880 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.2e-35
Identity = 138/546 (25.27%), Postives = 231/546 (42.31%), Query Frame = 0

Query: 42  FRETLNPSL--VSQVIDPHLLSHHSLA------LGFFNWASQQPGFAHNSES---YKSVL 101
           F ETLNP +  ++Q +   LLS  SLA      + FF WA      A  S+S     SV+
Sbjct: 26  FLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVSFFQWAQTSIPEAFPSDSPLPLISVV 85

Query: 102 KSLSLSRQFGAIHSLL-KQVKTQRIGLDL-----------------SVYHSVIDSLIIGK 161
           +SL    +F    SLL   ++T    L L                 +++   + + +   
Sbjct: 86  RSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEG 145

Query: 162 KTHDAFLVFKELTSVTHVIGSEPCNSLLAALA---SDGFFEHAQKVFDEMSLKGIPFNTL 221
           K H A  +F+++  +        CN+LL  L    S      A++VFD+M   G+  N  
Sbjct: 146 KPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQ 205

Query: 222 GFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRLSEASNILDE 281
            F V +   C    +   L ML+  ++       +V    I+  +    RLS+   +L +
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLD 265

Query: 282 LKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEFLFALIAGRR 341
           +K  G  P+ +TY  L   Y   GS+ +  + ++  ++  V P L  Y   +  L     
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325

Query: 342 ICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERFPTLLTLRNL 401
           + E  EL + +       D    N LI     +  S     L   +E +         N+
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI 385

Query: 402 S-RNLCKHGKLDELL-EVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGVLQEMKKN 461
           S + LCK  K + +  +V +L+  H +  D   YH  I    K G +  A  +++EM + 
Sbjct: 386 SLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445

Query: 462 GFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSKSNQMEEA 521
           G   +    N++L+A C+E  L  A  L +     G   +  TY  LI  F +  ++E+A
Sbjct: 446 GIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKA 505

Query: 522 LVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTLLSTFILC 554
           L ++  M   K+ P ++ + SL+ GLC   + E A E F +  E  +    +  ++ IL 
Sbjct: 506 LEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILG 565

BLAST of Carg24285-RA vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.8e-35
Identity = 132/538 (24.54%), Postives = 230/538 (42.75%), Query Frame = 0

Query: 64  SLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSVYHS 123
           S AL  FN AS++P F+     Y+ +L  L  S  F  +  +L+ +K+ R  +  S +  
Sbjct: 64  SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123

Query: 124 VIDSLIIGKKTHDAFLVFKELTSVT----HVIGSEP----CNSLLAALASDGFFEHAQKV 183
           +I+S       +  F +  E+ SV        G +P     N +L  L      +  +  
Sbjct: 124 LIES-------YAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 183

Query: 184 FDEMSLKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDD------------------AMTN 243
             +MS+ GI  +   F V I  +CR   +   + ML+D                      
Sbjct: 184 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 243

Query: 244 NSEING----------------SVVATLIIHGLCGASRLSEASNILDELKNR-GCKPDFL 303
             +++G                +V   +I+HG C   R+ +A N + E+ N+ G  PD  
Sbjct: 244 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 303

Query: 304 TYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEFLFALIAGRRICEAKELGEVI 363
           T+  L      AG V    + +    + G  P ++ Y   +  L     + EA E+ + +
Sbjct: 304 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 363

Query: 364 VRGNFPMDEDVSNVLIGSVAAIDP-SSAIMFLKLMVEKERFPTLLTLRNLSRNLCKHGKL 423
           +  +   +    N LI ++   +    A    +++  K   P + T  +L + LC     
Sbjct: 364 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 423

Query: 424 DELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFAPDVYFYNSV 483
              +E+++ +       D   Y++ I  LC  G + EA  +L++M+ +G A  V  YN++
Sbjct: 424 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 483

Query: 484 LEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSKSNQMEEALVLYRHMLGKKV 543
           ++  C+ +  R A +++DEM   G   N  TYN LI    KS ++E+A  L   M+ +  
Sbjct: 484 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 543

Query: 544 EPDITIYTSLLQGLCQESQLEAAFEVF----SKCVEQDVDLAGTLLSTFILCLCKAGK 554
           +PD   Y SLL   C+   ++ A ++     S   E D+   GTL+S     LCKAG+
Sbjct: 544 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG----LCKAGR 590

BLAST of Carg24285-RA vs. ExPASy TrEMBL
Match: A0A6J1FHE2 (pentatricopeptide repeat-containing protein At5g14080 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445400 PE=4 SV=1)

HSP 1 Score: 1253.4 bits (3242), Expect = 0.0e+00
Identity = 638/670 (95.22%), Postives = 638/670 (95.22%), Query Frame = 0

Query: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60
           MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120
           SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120

Query: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180
           YHSVIDSLIIGKKTHDAFLVFKELTSVT VIGSEPCNSLLAALASDGFFEHAQKVFDEMS
Sbjct: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTRVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240
           LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300
            EASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF
Sbjct: 241 PEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360
           LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480

Query: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540
           SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540

Query: 541 LSTFILCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAH 600
           LSTFILCLCK                              AGHFLAASKLLRGLTSDIAH
Sbjct: 541 LSTFILCLCK------------------------------AGHFLAASKLLRGLTSDIAH 600

Query: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 660
           PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ
Sbjct: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 640

Query: 661 TIQELSRFNN 671
           TIQELSRFNN
Sbjct: 661 TIQELSRFNN 640

BLAST of Carg24285-RA vs. ExPASy TrEMBL
Match: A0A6J1JUL2 (pentatricopeptide repeat-containing protein At5g14080 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489037 PE=4 SV=1)

HSP 1 Score: 1236.1 bits (3197), Expect = 0.0e+00
Identity = 627/670 (93.58%), Postives = 633/670 (94.48%), Query Frame = 0

Query: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60
           MKPHLQELATRVSRT+LSISNHT PAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTVLSISNHTSPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120
           SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIH LLKQVKTQRIGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHCLLKQVKTQRIGLDLSV 120

Query: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180
           YHSVIDSLIIGKKTHDAFLVFKE+TSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS
Sbjct: 121 YHSVIDSLIIGKKTHDAFLVFKEVTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240
           LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300
           SEASNILDELKNRGCKPDFLTYWILGEAY+ AGSVVDREKTLKKKRKLGVAPRLHDYKEF
Sbjct: 241 SEASNILDELKNRGCKPDFLTYWILGEAYRLAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360
           LFALIAGRRICEAKELGEVIVR NFPMDEDVSNVLIGSVAAIDPSSAIMFL  MVEKERF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRANFPMDEDVSNVLIGSVAAIDPSSAIMFLMFMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKHGKLDELLEVYQ+LSKHNYFDDYDRY LRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQVLSKHNYFDDYDRYRLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNIL+QKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILVQKFSK 480

Query: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540
           SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDV+LAGTL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVNLAGTL 540

Query: 541 LSTFILCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAH 600
           LSTFILCLCK                              AGHFLAASKLLRGLTSDIAH
Sbjct: 541 LSTFILCLCK------------------------------AGHFLAASKLLRGLTSDIAH 600

Query: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 660
           PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ
Sbjct: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 640

Query: 661 TIQELSRFNN 671
           TIQELSRFNN
Sbjct: 661 TIQELSRFNN 640

BLAST of Carg24285-RA vs. ExPASy TrEMBL
Match: A0A6J1FMX2 (pentatricopeptide repeat-containing protein At5g14080 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445400 PE=4 SV=1)

HSP 1 Score: 1171.0 bits (3028), Expect = 0.0e+00
Identity = 604/670 (90.15%), Postives = 604/670 (90.15%), Query Frame = 0

Query: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60
           MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120
           SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQ            
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQ------------ 120

Query: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180
                                 ELTSVT VIGSEPCNSLLAALASDGFFEHAQKVFDEMS
Sbjct: 121 ----------------------ELTSVTRVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240
           LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300
            EASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF
Sbjct: 241 PEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360
           LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480

Query: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540
           SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540

Query: 541 LSTFILCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAH 600
           LSTFILCLCK                              AGHFLAASKLLRGLTSDIAH
Sbjct: 541 LSTFILCLCK------------------------------AGHFLAASKLLRGLTSDIAH 600

Query: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 660
           PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ
Sbjct: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 606

Query: 661 TIQELSRFNN 671
           TIQELSRFNN
Sbjct: 661 TIQELSRFNN 606

BLAST of Carg24285-RA vs. ExPASy TrEMBL
Match: A0A6J1JR00 (pentatricopeptide repeat-containing protein At5g14080 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489037 PE=4 SV=1)

HSP 1 Score: 1153.7 bits (2983), Expect = 0.0e+00
Identity = 593/670 (88.51%), Postives = 599/670 (89.40%), Query Frame = 0

Query: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60
           MKPHLQELATRVSRT+LSISNHT PAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTVLSISNHTSPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120
           SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIH LLKQ            
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHCLLKQ------------ 120

Query: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180
                                 E+TSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS
Sbjct: 121 ----------------------EVTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240
           LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300
           SEASNILDELKNRGCKPDFLTYWILGEAY+ AGSVVDREKTLKKKRKLGVAPRLHDYKEF
Sbjct: 241 SEASNILDELKNRGCKPDFLTYWILGEAYRLAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360
           LFALIAGRRICEAKELGEVIVR NFPMDEDVSNVLIGSVAAIDPSSAIMFL  MVEKERF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRANFPMDEDVSNVLIGSVAAIDPSSAIMFLMFMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKHGKLDELLEVYQ+LSKHNYFDDYDRY LRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQVLSKHNYFDDYDRYRLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNIL+QKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILVQKFSK 480

Query: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540
           SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDV+LAGTL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVNLAGTL 540

Query: 541 LSTFILCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAH 600
           LSTFILCLCK                              AGHFLAASKLLRGLTSDIAH
Sbjct: 541 LSTFILCLCK------------------------------AGHFLAASKLLRGLTSDIAH 600

Query: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 660
           PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ
Sbjct: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 606

Query: 661 TIQELSRFNN 671
           TIQELSRFNN
Sbjct: 661 TIQELSRFNN 606

BLAST of Carg24285-RA vs. ExPASy TrEMBL
Match: A0A0A0LMX0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G405040 PE=4 SV=1)

HSP 1 Score: 1107.8 bits (2864), Expect = 0.0e+00
Identity = 559/670 (83.43%), Postives = 595/670 (88.81%), Query Frame = 0

Query: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60
           M+PH  ELATR+SR ILSISN T PAGSWTPSLEQNLHRLGFR+ LNPSLVSQVIDPHLL
Sbjct: 1   MRPHFPELATRLSRAILSISNQTSPAGSWTPSLEQNLHRLGFRQMLNPSLVSQVIDPHLL 60

Query: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120
           SHHSLALGFFNWASQQPGF HNS+SY S+LKSLSLSR FG IHSLLKQVKTQ+IGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFTHNSDSYNSILKSLSLSRHFGPIHSLLKQVKTQKIGLDLSV 120

Query: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180
           Y +VIDSLII KKTHDAFLVF E+TS+TH+IGSE CNSLLAALASDGFFEHAQKVFDEMS
Sbjct: 121 YRAVIDSLIIAKKTHDAFLVFNEVTSITHIIGSELCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240
           LK IPFNTLGFGVFIWR+CRN DVVKVLNM+D A TNNS+INGSV+ATLIIHGLC ASRL
Sbjct: 181 LKSIPFNTLGFGVFIWRICRNTDVVKVLNMIDGARTNNSDINGSVIATLIIHGLCEASRL 240

Query: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300
            EASNILDELKNRGCKPDFLTYWILGEA+QSA +VVDREK LKKKRKLGVAPRL+DYKE+
Sbjct: 241 EEASNILDELKNRGCKPDFLTYWILGEAFQSARNVVDREKILKKKRKLGVAPRLNDYKEY 300

Query: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360
           LF LIAGRRI EAKELGEVIV+GNFPMDE+VSNVLIGSVA++DP SAIMF K MVEK RF
Sbjct: 301 LFVLIAGRRIREAKELGEVIVKGNFPMDEEVSNVLIGSVASVDPYSAIMFFKFMVEKGRF 360

Query: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKHGK DELLEV+Q+L  +NYF+D DRYHLRISFLCKAG VKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKTDELLEVFQVLCINNYFNDLDRYHLRISFLCKAGKVKEAYGV 420

Query: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480
           LQEMKKNGF PDV FYNSVLEACCREDLLRPARKLWDEMFA GC GNLKTY+ILIQKFSK
Sbjct: 421 LQEMKKNGFDPDVSFYNSVLEACCREDLLRPARKLWDEMFAGGCCGNLKTYSILIQKFSK 480

Query: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540
           SNQ+EEALVLY HMLGK VEPDI IYTSLLQGLCQ+SQLEAAFEVFSK VEQDV+LA TL
Sbjct: 481 SNQIEEALVLYSHMLGKNVEPDIAIYTSLLQGLCQDSQLEAAFEVFSKSVEQDVNLAATL 540

Query: 541 LSTFILCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAH 600
           LSTFILCLCK                               GHFLAASKLLRGL SD+AH
Sbjct: 541 LSTFILCLCK------------------------------VGHFLAASKLLRGLASDVAH 600

Query: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 660
           PDSHVTLLKGFADAGEV LAKQHVEWVQETSPSMLSVIS+ELLAFLPSSPKADPIL+ILQ
Sbjct: 601 PDSHVTLLKGFADAGEVSLAKQHVEWVQETSPSMLSVISTELLAFLPSSPKADPILEILQ 640

Query: 661 TIQELSRFNN 671
           T+QELSRF++
Sbjct: 661 TVQELSRFSH 640

BLAST of Carg24285-RA vs. TAIR 10
Match: AT5G14080.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 641.3 bits (1653), Expect = 8.4e-184
Identity = 325/658 (49.39%), Postives = 447/658 (67.93%), Query Frame = 0

Query: 7   ELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLLSHHSLA 66
           ELA R+ R +L +S  +R A  W+P +EQ+LH LGFR +++PSLV++VIDP LL+HHSLA
Sbjct: 6   ELAVRIGRELLKVSGSSRAARIWSPLIEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLA 65

Query: 67  LGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSVYHSVID 126
           LGFFNWA+QQPG++H+S SY S+ KSLSLSRQF A+ +L KQVK+ +I LD SVY S+ID
Sbjct: 66  LGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLID 125

Query: 127 SLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMSLKGIPF 186
           +L++G+K   AF V +E  S    I  + CN LLA L SDG +++AQK+F +M  KG+  
Sbjct: 126 TLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSL 185

Query: 187 NTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRLSEASNI 246
           NTLGFGV+I   CR+++  ++L ++D+    N  INGS++A LI+H LC  SR  +A  I
Sbjct: 186 NTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYI 245

Query: 247 LDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEFLFALIA 306
           L+EL+N  CKPDF+ Y ++ EA+   G++ +R+  LKKKRKLGVAPR  DY+ F+  LI+
Sbjct: 246 LEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLIS 305

Query: 307 GRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERFPTLLTL 366
            +R+ EAKE+ EVIV G FPMD D+ + LIGSV+A+DP SA+ FL  MV   + P + TL
Sbjct: 306 AKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTL 365

Query: 367 RNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGVLQEMKK 426
             LS+NLC+H K D L++ Y+LLS   YF +   Y L ISFLCKAG V+E+Y  LQEMKK
Sbjct: 366 SKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKK 425

Query: 427 NGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSKSNQMEE 486
            G APDV  YN+++EACC+ +++RPA+KLWDEMF  GC  NL TYN+LI+K S+  + EE
Sbjct: 426 EGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEE 485

Query: 487 ALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQD-VDLAGTLLSTFI 546
           +L L+  ML + +EPD TIY SL++GLC+E+++EAA EVF KC+E+D   +   +LS F+
Sbjct: 486 SLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFV 545

Query: 547 LCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAHPDSHV 606
           L LC                              + GH   AS+LLR     + H  +HV
Sbjct: 546 LNLC------------------------------SNGHSGEASQLLRE-REHLEHTGAHV 605

Query: 607 TLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQTIQ 664
            LLK  ADA EV +  +H++W++E SPS++  ISS+LLA   SS   D IL  ++ I+
Sbjct: 606 VLLKCVADAKEVEIGIRHMQWIKEVSPSLVHTISSDLLASFCSSSDPDSILPFIRAIE 632

BLAST of Carg24285-RA vs. TAIR 10
Match: AT5G61990.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 165.2 bits (417), Expect = 1.8e-40
Identity = 116/464 (25.00%), Postives = 213/464 (45.91%), Query Frame = 0

Query: 85  SYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSVYHSVIDSLIIGKKTHDAFLVFKEL 144
           +Y  ++  L   ++     SLL ++ +  + LD   Y  +ID L+ G+    A  +  E+
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338

Query: 145 TSVTHVIGSEP--CNSLLAALASDGFFEHAQKVFDEMSLKGIPFNTLGFGVFIWRVCRNA 204
             V+H I  +P   +  +  ++ +G  E A+ +FD M   G+      +   I   CR  
Sbjct: 339 --VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 398

Query: 205 DVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRLSEASNILDELKNRGCKPDFLTY 264
           +V +   +L +    N  I+     T ++ G+C +  L  A NI+ E+   GC+P+ + Y
Sbjct: 399 NVRQGYELLVEMKKRNIVISPYTYGT-VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIY 458

Query: 265 WILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEFLFALIAGRRICEAKE-LGEVIV 324
             L + +       D  + LK+ ++ G+AP +  Y   +  L   +R+ EA+  L E++ 
Sbjct: 459 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 518

Query: 325 RGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERFPTLLTLRNLSRNLCKHGKLDE 384
            G  P        + G + A + +SA  ++K M E    P  +    L    CK GK+ E
Sbjct: 519 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 578

Query: 385 LLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFAPDVYFYNSVLE 444
               Y+ +       D   Y + ++ L K   V +A  + +EM+  G APDV+ Y  ++ 
Sbjct: 579 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 638

Query: 445 ACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSKSNQMEEALVLYRHMLGKKVEP 504
              +   ++ A  ++DEM   G   N+  YN+L+  F +S ++E+A  L   M  K + P
Sbjct: 639 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 698

Query: 505 DITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTLLSTFI 546
           +   Y +++ G C+   L  AF +F      ++ L G +  +F+
Sbjct: 699 NAVTYCTIIDGYCKSGDLAEAFRLF-----DEMKLKGLVPDSFV 734

BLAST of Carg24285-RA vs. TAIR 10
Match: AT1G06710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 9.7e-39
Identity = 126/507 (24.85%), Postives = 228/507 (44.97%), Query Frame = 0

Query: 42  FRETLNPSLVSQVIDPHLLSHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGA 101
           FRE L+ SLV +V+   L++  S  + FF WA +Q G+ H +  Y +++  +        
Sbjct: 126 FREKLSESLVIEVL--RLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKV 185

Query: 102 IHSLLKQVKTQRIGLDLSVYHSVIDSLIIGKKTHDAFLVFKE----LTSVTHVIGSEPCN 161
               L+Q++      D  V+   ++ L+     + +F +  E    L            N
Sbjct: 186 PEEFLQQIRDD----DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN 245

Query: 162 SLLAALASDGFFEHAQKVFDEMSLKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTN 221
            L+ A       + A  +  EMSL  +  +      F + +C+     + L +++     
Sbjct: 246 CLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE----T 305

Query: 222 NSEINGSVVATLIIHGLCGASRLSEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVD 281
            + +  +V  T +I GLC AS   EA + L+ ++   C P+ +TY  L     +   +  
Sbjct: 306 ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGR 365

Query: 282 REKTLKKKRKLGVAPRLHDYKEFLFA-LIAGRRICEAKELGEVIVRGNFPMDEDVSNVLI 341
            ++ L      G  P    +   + A   +G      K L +++  G+ P    V N+LI
Sbjct: 366 CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP-GYVVYNILI 425

Query: 342 GSVAAIDPSSAIMFLKLMVEKERFPTL--------LTLRNLSRNLCKHGKLDELLEVYQL 401
           GS+   D  S    L  + EK     L        + + + +R LC  GK ++   V + 
Sbjct: 426 GSICG-DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 485

Query: 402 LSKHNYFDDYDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFAPDVYFYNSVLEACCREDL 461
           +    +  D   Y   +++LC A  ++ A+ + +EMK+ G   DVY Y  ++++ C+  L
Sbjct: 486 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 545

Query: 462 LRPARKLWDEMFASGCGGNLKTYNILIQKFSKSNQMEEALVLYRHMLGKKVEPDITIYTS 521
           +  ARK ++EM   GC  N+ TY  LI  + K+ ++  A  L+  ML +   P+I  Y++
Sbjct: 546 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 605

Query: 522 LLQGLCQESQLEAAFEVFSK-CVEQDV 535
           L+ G C+  Q+E A ++F + C  +DV
Sbjct: 606 LIDGHCKAGQVEKACQIFERMCGSKDV 620

BLAST of Carg24285-RA vs. TAIR 10
Match: AT2G16880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 1.5e-36
Identity = 138/546 (25.27%), Postives = 231/546 (42.31%), Query Frame = 0

Query: 42  FRETLNPSL--VSQVIDPHLLSHHSLA------LGFFNWASQQPGFAHNSES---YKSVL 101
           F ETLNP +  ++Q +   LLS  SLA      + FF WA      A  S+S     SV+
Sbjct: 26  FLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVSFFQWAQTSIPEAFPSDSPLPLISVV 85

Query: 102 KSLSLSRQFGAIHSLL-KQVKTQRIGLDL-----------------SVYHSVIDSLIIGK 161
           +SL    +F    SLL   ++T    L L                 +++   + + +   
Sbjct: 86  RSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEG 145

Query: 162 KTHDAFLVFKELTSVTHVIGSEPCNSLLAALA---SDGFFEHAQKVFDEMSLKGIPFNTL 221
           K H A  +F+++  +        CN+LL  L    S      A++VFD+M   G+  N  
Sbjct: 146 KPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQ 205

Query: 222 GFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRLSEASNILDE 281
            F V +   C    +   L ML+  ++       +V    I+  +    RLS+   +L +
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLD 265

Query: 282 LKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEFLFALIAGRR 341
           +K  G  P+ +TY  L   Y   GS+ +  + ++  ++  V P L  Y   +  L     
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325

Query: 342 ICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERFPTLLTLRNL 401
           + E  EL + +       D    N LI     +  S     L   +E +         N+
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI 385

Query: 402 S-RNLCKHGKLDELL-EVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGVLQEMKKN 461
           S + LCK  K + +  +V +L+  H +  D   YH  I    K G +  A  +++EM + 
Sbjct: 386 SLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445

Query: 462 GFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSKSNQMEEA 521
           G   +    N++L+A C+E  L  A  L +     G   +  TY  LI  F +  ++E+A
Sbjct: 446 GIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKA 505

Query: 522 LVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTLLSTFILC 554
           L ++  M   K+ P ++ + SL+ GLC   + E A E F +  E  +    +  ++ IL 
Sbjct: 506 LEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILG 565

BLAST of Carg24285-RA vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 151.0 bits (380), Expect = 3.4e-36
Identity = 132/538 (24.54%), Postives = 230/538 (42.75%), Query Frame = 0

Query: 64  SLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSVYHS 123
           S AL  FN AS++P F+     Y+ +L  L  S  F  +  +L+ +K+ R  +  S +  
Sbjct: 64  SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123

Query: 124 VIDSLIIGKKTHDAFLVFKELTSVT----HVIGSEP----CNSLLAALASDGFFEHAQKV 183
           +I+S       +  F +  E+ SV        G +P     N +L  L      +  +  
Sbjct: 124 LIES-------YAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 183

Query: 184 FDEMSLKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDD------------------AMTN 243
             +MS+ GI  +   F V I  +CR   +   + ML+D                      
Sbjct: 184 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 243

Query: 244 NSEING----------------SVVATLIIHGLCGASRLSEASNILDELKNR-GCKPDFL 303
             +++G                +V   +I+HG C   R+ +A N + E+ N+ G  PD  
Sbjct: 244 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 303

Query: 304 TYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEFLFALIAGRRICEAKELGEVI 363
           T+  L      AG V    + +    + G  P ++ Y   +  L     + EA E+ + +
Sbjct: 304 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 363

Query: 364 VRGNFPMDEDVSNVLIGSVAAIDP-SSAIMFLKLMVEKERFPTLLTLRNLSRNLCKHGKL 423
           +  +   +    N LI ++   +    A    +++  K   P + T  +L + LC     
Sbjct: 364 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 423

Query: 424 DELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFAPDVYFYNSV 483
              +E+++ +       D   Y++ I  LC  G + EA  +L++M+ +G A  V  YN++
Sbjct: 424 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 483

Query: 484 LEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSKSNQMEEALVLYRHMLGKKV 543
           ++  C+ +  R A +++DEM   G   N  TYN LI    KS ++E+A  L   M+ +  
Sbjct: 484 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 543

Query: 544 EPDITIYTSLLQGLCQESQLEAAFEVF----SKCVEQDVDLAGTLLSTFILCLCKAGK 554
           +PD   Y SLL   C+   ++ A ++     S   E D+   GTL+S     LCKAG+
Sbjct: 544 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG----LCKAGR 590

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7015944.10.0e+00100.00Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG6578360.10.0e+0095.37Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022939514.10.0e+0095.22pentatricopeptide repeat-containing protein At5g14080 isoform X1 [Cucurbita mosc... [more]
XP_023550678.10.0e+0094.33pentatricopeptide repeat-containing protein At5g14080 isoform X1 [Cucurbita pepo... [more]
XP_022992821.10.0e+0093.58pentatricopeptide repeat-containing protein At5g14080 isoform X1 [Cucurbita maxi... [more]
Match NameE-valueIdentityDescription
Q9FMU21.2e-18249.39Pentatricopeptide repeat-containing protein At5g14080 OS=Arabidopsis thaliana OX... [more]
Q9FIT72.5e-3925.00Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidop... [more]
Q9M9X91.4e-3724.85Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidop... [more]
Q9ZVX52.2e-3525.27Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX... [more]
Q9LFF14.8e-3524.54Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1FHE20.0e+0095.22pentatricopeptide repeat-containing protein At5g14080 isoform X1 OS=Cucurbita mo... [more]
A0A6J1JUL20.0e+0093.58pentatricopeptide repeat-containing protein At5g14080 isoform X1 OS=Cucurbita ma... [more]
A0A6J1FMX20.0e+0090.15pentatricopeptide repeat-containing protein At5g14080 isoform X2 OS=Cucurbita mo... [more]
A0A6J1JR000.0e+0088.51pentatricopeptide repeat-containing protein At5g14080 isoform X2 OS=Cucurbita ma... [more]
A0A0A0LMX00.0e+0083.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G405040 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G14080.18.4e-18449.39Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G61990.11.8e-4025.00Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G06710.19.7e-3924.85Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G16880.11.5e-3625.27Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.13.4e-3624.54Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 228..258
e-value: 4.9E-5
score: 21.2
coord: 470..503
e-value: 3.4E-7
score: 28.0
coord: 156..187
e-value: 0.0016
score: 16.5
coord: 436..465
e-value: 3.5E-4
score: 18.5
coord: 505..528
e-value: 0.003
score: 15.6
coord: 404..433
e-value: 4.2E-7
score: 27.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 224..265
e-value: 2.3E-7
score: 30.9
coord: 468..515
e-value: 2.2E-11
score: 43.8
coord: 405..445
e-value: 8.7E-10
score: 38.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 156..184
e-value: 4.7E-4
score: 20.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 432..466
score: 10.39137
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 223..257
score: 9.766576
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 502..536
score: 9.624079
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 397..431
score: 10.698286
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 152..186
score: 9.163705
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 467..501
score: 11.629997
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 220..286
e-value: 1.8E-7
score: 32.9
coord: 153..219
e-value: 1.9E-5
score: 26.2
coord: 32..150
e-value: 1.0E-9
score: 40.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 287..448
e-value: 1.7E-18
score: 69.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 449..651
e-value: 2.1E-22
score: 82.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 370..532
NoneNo IPR availablePANTHERPTHR47938:SF25PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 4..554
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 4..554
NoneNo IPR availablePANTHERPTHR47938:SF25PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 580..665
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 580..665

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg24285Carg24285gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg24285-RA:1Carg24285-RA:1exon
Carg24285-RA:2Carg24285-RA:2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg24285-RA:cdsCarg24285-RA:cdsCDS
Carg24285-RA:cdsCarg24285-RA:cds_2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg24285-RACarg24285-RA-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding