Carg22684-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22684-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function, DUF538
Location	Carg_Chr11: 4700575 .. 4701057 (-)
Sequence length	483
RNA-Seq Expression	Carg22684-RA
Synteny	Carg22684-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCCTCTCCCCATTCTCACTTCTCCTTCTAATTCTCACCATTACCGCCCAAACCCATCTCGCCTCTTCCGCAAGGGACATCGCCCTCAACTCAACGGACATCCACGAGCTTTTGCCCCTTTACGGTTTTCCAAAGGGTCTCTTACCCAACAATGTCAAGTCCTACACGCTCTCTGCCGATGGTAGCTTCGAAATCGAACTCGAAAGCGAGTGTTATGTGAAGTTCGATCTGTTGGTGTATTACGATAAGATAGTGAAAGGGAAATTGAGGTATGGGTCTGTGGCGGATGTTTCTGGAATTCAAGCAAAGAAGCTGTTCTTGTGGGTCTCTGTTACAGGAATCAAGGCTAATCAGGGCTCTGGAACCATTGATTTTTATGTTGGGGTTTTGTCGGAGACTTTGCCGGCTCAACAGTTCCAGAAGATTCCTGCATGTACACGGGAGGGTTGCGTAGGAGAAAGAACAGAGGCTATGTGA

mRNA sequence

ATGGCTTCCCTCTCCCCATTCTCACTTCTCCTTCTAATTCTCACCATTACCGCCCAAACCCATCTCGCCTCTTCCGCAAGGGACATCGCCCTCAACTCAACGGACATCCACGAGCTTTTGCCCCTTTACGGTTTTCCAAAGGGTCTCTTACCCAACAATGTCAAGTCCTACACGCTCTCTGCCGATGGTAGCTTCGAAATCGAACTCGAAAGCGAGTGTTATGTGAAGTTCGATCTGTTGGTGTATTACGATAAGATAGTGAAAGGGAAATTGAGGTATGGGTCTGTGGCGGATGTTTCTGGAATTCAAGCAAAGAAGCTGTTCTTGTGGGTCTCTGTTACAGGAATCAAGGCTAATCAGGGCTCTGGAACCATTGATTTTTATGTTGGGGTTTTGTCGGAGACTTTGCCGGCTCAACAGTTCCAGAAGATTCCTGCATGTACACGGGAGGGTTGCGTAGGAGAAAGAACAGAGGCTATGTGA

Coding sequence (CDS)

ATGGCTTCCCTCTCCCCATTCTCACTTCTCCTTCTAATTCTCACCATTACCGCCCAAACCCATCTCGCCTCTTCCGCAAGGGACATCGCCCTCAACTCAACGGACATCCACGAGCTTTTGCCCCTTTACGGTTTTCCAAAGGGTCTCTTACCCAACAATGTCAAGTCCTACACGCTCTCTGCCGATGGTAGCTTCGAAATCGAACTCGAAAGCGAGTGTTATGTGAAGTTCGATCTGTTGGTGTATTACGATAAGATAGTGAAAGGGAAATTGAGGTATGGGTCTGTGGCGGATGTTTCTGGAATTCAAGCAAAGAAGCTGTTCTTGTGGGTCTCTGTTACAGGAATCAAGGCTAATCAGGGCTCTGGAACCATTGATTTTTATGTTGGGGTTTTGTCGGAGACTTTGCCGGCTCAACAGTTCCAGAAGATTCCTGCATGTACACGGGAGGGTTGCGTAGGAGAAAGAACAGAGGCTATGTGA

Protein sequence

MASLSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLSADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQGSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM

Homology

[Close]

BLAST of Carg22684-RA vs. NCBI nr
Match: KAG7022156.1 (hypothetical protein SDJN02_15885, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315.5 bits (807), Expect = 2.7e-82
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MASLSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60
           MASLSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS
Sbjct: 1   MASLSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60

Query: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120
           ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ
Sbjct: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120

Query: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM
Sbjct: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 160

[Close]

BLAST of Carg22684-RA vs. NCBI nr
Match: KAG6588240.1 (hypothetical protein SDJN03_16805, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312.8 bits (800), Expect = 1.8e-81
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MASLSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60
           MASLSPFSLLLLILTITAQTH+ASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS
Sbjct: 1   MASLSPFSLLLLILTITAQTHVASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60

Query: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120
           ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ
Sbjct: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120

Query: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           GSGTIDFYVGVLSETLPAQQFQKIP CTREGCVGERTEAM
Sbjct: 121 GSGTIDFYVGVLSETLPAQQFQKIPGCTREGCVGERTEAM 160

[Close]

BLAST of Carg22684-RA vs. NCBI nr
Match: XP_022933750.1 (uncharacterized protein LOC111441073 [Cucurbita moschata])

HSP 1 Score: 311.6 bits (797), Expect = 3.9e-81
Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MASLSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60
           MASLSPFSLLLLILTI AQTHLASS RDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS
Sbjct: 1   MASLSPFSLLLLILTIIAQTHLASSVRDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60

Query: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120
           ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ
Sbjct: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120

Query: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM
Sbjct: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 160

[Close]

BLAST of Carg22684-RA vs. NCBI nr
Match: XP_023531629.1 (uncharacterized protein LOC111793813 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78
Identity = 153/160 (95.62%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MASLSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60
           MASLS FSLLLLILTITAQTHLASS RDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS
Sbjct: 1   MASLSRFSLLLLILTITAQTHLASSVRDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60

Query: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120
           ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGI+AKKLFLWVSVTGI+ANQ
Sbjct: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIEAKKLFLWVSVTGIEANQ 120

Query: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           GSGTIDFYVGVLSETLPAQQFQKIPACTR+ C+GERTEAM
Sbjct: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTRKACLGERTEAM 160

[Close]

BLAST of Carg22684-RA vs. NCBI nr
Match: XP_023006181.1 (uncharacterized protein LOC111498989 [Cucurbita maxima])

HSP 1 Score: 296.6 bits (758), Expect = 1.3e-76
Identity = 150/160 (93.75%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MASLSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60
           MASLSPFSLLLLILTITAQTH+ASS RDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS
Sbjct: 1   MASLSPFSLLLLILTITAQTHVASSVRDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60

Query: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120
            DGSFEIELESECYVKFDLLVYY+KIVKGKL YGSVADVSGIQAKKLFLWVSVTGI+ANQ
Sbjct: 61  DDGSFEIELESECYVKFDLLVYYEKIVKGKLSYGSVADVSGIQAKKLFLWVSVTGIEANQ 120

Query: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           GSGTIDFYVGVLSETLPAQQFQKIPACTR+ C GE TEAM
Sbjct: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTRKACFGEGTEAM 160

[Close]

BLAST of Carg22684-RA vs. ExPASy TrEMBL
Match: A0A6J1F5P9 (uncharacterized protein LOC111441073 OS=Cucurbita moschata OX=3662 GN=LOC111441073 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MASLSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60
           MASLSPFSLLLLILTI AQTHLASS RDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS
Sbjct: 1   MASLSPFSLLLLILTIIAQTHLASSVRDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60

Query: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120
           ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ
Sbjct: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120

Query: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM
Sbjct: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 160

[Close]

BLAST of Carg22684-RA vs. ExPASy TrEMBL
Match: A0A6J1KX25 (uncharacterized protein LOC111498989 OS=Cucurbita maxima OX=3661 GN=LOC111498989 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.3e-77
Identity = 150/160 (93.75%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MASLSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60
           MASLSPFSLLLLILTITAQTH+ASS RDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS
Sbjct: 1   MASLSPFSLLLLILTITAQTHVASSVRDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60

Query: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120
            DGSFEIELESECYVKFDLLVYY+KIVKGKL YGSVADVSGIQAKKLFLWVSVTGI+ANQ
Sbjct: 61  DDGSFEIELESECYVKFDLLVYYEKIVKGKLSYGSVADVSGIQAKKLFLWVSVTGIEANQ 120

Query: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           GSGTIDFYVGVLSETLPAQQFQKIPACTR+ C GE TEAM
Sbjct: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTRKACFGEGTEAM 160

[Close]

BLAST of Carg22684-RA vs. ExPASy TrEMBL
Match: A0A6J1DIG2 (uncharacterized protein LOC111020803 OS=Momordica charantia OX=3673 GN=LOC111020803 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.1e-56
Identity = 122/172 (70.93%), Postives = 130/172 (75.58%), Query Frame = 0


Query: 1   MASLSP--FSLLLLILTITAQTHLASSARDIALNS----------TDIHELLPLYGFPKG 60
           MAS S   FS  LLIL I  QTHL+ S  D  + S           D+HELLP YGFPKG
Sbjct: 1   MASFSRTIFSPFLLILAICTQTHLSISLTDPKIESNRPSFPLKSTADVHELLPQYGFPKG 60

Query: 61  LLPNNVKSYTLSADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLF 120
           LLP+NVKSYTLS DGSFEIELESECYVKF LLVYYDK +KGKL YGSV D SGIQAKKLF
Sbjct: 61  LLPSNVKSYTLSDDGSFEIELESECYVKFSLLVYYDKKIKGKLSYGSVVDASGIQAKKLF 120

Query: 121 LWVSVTGIKANQGSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           LWVSVTGIKAN   GTIDF+VG LSETL AQQFQKIP C R  C+GERTEA+
Sbjct: 121 LWVSVTGIKANPAEGTIDFFVGFLSETLSAQQFQKIPGCKRNDCLGERTEAI 172

[Close]

BLAST of Carg22684-RA vs. ExPASy TrEMBL
Match: A0A6J1H9I3 (uncharacterized protein LOC111461358 OS=Cucurbita moschata OX=3662 GN=LOC111461358 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.2e-55
Identity = 111/157 (70.70%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 4   LSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLSADG 63
           LSPFSL LLIL I+ QTHL+ S+ D  LN TDIHELL  YGFP GLLPNNVKSYTLS DG
Sbjct: 8   LSPFSLFLLILAISTQTHLSFSSIDKPLNPTDIHELLLRYGFPAGLLPNNVKSYTLSDDG 67

Query: 64  SFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQGSG 123
           +FEIEL+++CYV F  LVYY+K + GKL YGSV DVSGIQ KKLFLW+SV+G K+NQGSG
Sbjct: 68  AFEIELKADCYVMFSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWLSVSGFKSNQGSG 127

Query: 124 TIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           TI F+VG LSET PA+ F+ IP C R+GC+G RTEAM
Sbjct: 128 TIVFFVGSLSETFPAEMFRTIPGCRRKGCLGGRTEAM 164

[Close]

BLAST of Carg22684-RA vs. ExPASy TrEMBL
Match: A0A5A7UJ73 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00410 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 5.5e-49
Identity = 99/157 (63.06%), Postives = 122/157 (77.71%), Query Frame = 0


Query: 4   LSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLSADG 63
           LSPFSL LLIL I+ QTHL+ SARD+ L S+DIH+LLPLYGFP GLLP+NVKSYTLS DG
Sbjct: 8   LSPFSLFLLILVISTQTHLSFSARDLLLKSSDIHDLLPLYGFPVGLLPSNVKSYTLSDDG 67

Query: 64  SFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQGSG 123
           SF IEL+S CYV+F  LVYY K +KGKL YGS++DVSGIQ KKLF W+ +TG++    S 
Sbjct: 68  SFVIELDSACYVQFADLVYYGKTIKGKLSYGSLSDVSGIQVKKLFAWLPITGMRVTSDSK 127

Query: 124 TIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           +I+F VG LSE LP   F+ IP C ++ C+  +TEA+
Sbjct: 128 SIEFQVGFLSEALPFSMFESIPTCRKKACLEGKTEAV 164

[Close]

BLAST of Carg22684-RA vs. TAIR 10
Match: AT1G55265.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 151.0 bits (380), Expect = 8.2e-37
Identity = 78/154 (50.65%), Postives = 105/154 (68.18%), Query Frame = 0


Query: 8   SLLLLILTITAQTHLASSARDIALNST-----------DIHELLPLYGFPKGLLPNNVKS 67
           SLL L  ++  +  + S + D+ L S+           DIH+LLP YGFPKGLLPNNVKS
Sbjct: 15  SLLSLSSSLNLRRPIFSQSNDLDLFSSLNLDRPSLAADDIHDLLPRYGFPKGLLPNNVKS 74

Query: 68  YTLSADGSFEIELESECYVKF-DLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTG 127
           YT+S DG F ++L S CYVKF D LV+Y K + GKL YGSV DV GIQAK+ FLW+ +T 
Sbjct: 75  YTISDDGDFTVDLISSCYVKFSDQLVFYGKNIAGKLSYGSVKDVRGIQAKEAFLWLPITA 134

Query: 128 IKANQGSGTIDFYVGVLSETLPAQQFQKIPACTR 150
           ++++  S T+ F VG +S+TLPA  F+ +P+C+R
Sbjct: 135 MESDPSSATVVFSVGFVSKTLPASMFENVPSCSR 168

[Close]

BLAST of Carg22684-RA vs. TAIR 10
Match: AT5G19860.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-26
Identity = 61/154 (39.61%), Postives = 93/154 (60.39%), Query Frame = 0


Query: 3   SLSPFSLLLLILTITAQTHLASSARDIALNS-TDIHELLPLYGFPKGLLPNNVKSYTLSA 62
           +L PF + + I ++T  T    S  +   +S + ++ELLP YG P GLLP+ V  +TLS 
Sbjct: 2   ALYPFFISIFIFSLTLFTTTTHSLNEPDPDSISTVYELLPKYGLPSGLLPDTVTDFTLSD 61

Query: 63  DGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKAN-Q 122
           DG F + L + C ++FD LV+YDK + G++ YGS+ ++ GIQ KK F+W+ V  IK +  
Sbjct: 62  DGRFVVHLPNSCEIEFDYLVHYDKTISGRIGYGSITELKGIQVKKFFIWLDVDEIKVDLP 121

Query: 123 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVG 155
            S +I F VG +++ L   QF+ I +C   G  G
Sbjct: 122 PSDSIYFKVGFINKKLDIDQFKTIHSCHDNGVSG 155

[Close]

BLAST of Carg22684-RA vs. TAIR 10
Match: AT5G54530.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 96.7 bits (239), Expect = 1.8e-20
Identity = 53/149 (35.57%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 9   LLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLSADGSFEIE 68
           ++LL+ T+     L+S       +   +H++L   G P GLLP  V SY L  DG  E+ 
Sbjct: 8   MILLLTTLRLSLSLSSP------SYPTVHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVF 67

Query: 69  LESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKA-NQGSGTIDF 128
           L + CY KF+  V+++ +V+G L YGS+  V G+  K+LFLW+ V  I   N  SG I F
Sbjct: 68  LAAPCYAKFETNVHFEAVVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVF 127

Query: 129 YVGVLSETLPAQQFQKIPACTREGCVGER 157
            +GV  + L    F+  P C  +G + ++
Sbjct: 128 DIGVAFKQLSLSLFEDPPKCKPDGVLKKK 150

[Close]

BLAST of Carg22684-RA vs. TAIR 10
Match: AT1G61667.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-19
Identity = 52/152 (34.21%), Postives = 83/152 (54.61%), Query Frame = 0


Query: 9   LLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTL-SADGSFEI 68
           LLLL+L +   T  + S+         I  LL   G P GL P+NV+SY+L    G  E+
Sbjct: 4   LLLLLLLVPFITPSSQSS---------IRNLLEARGLPGGLFPDNVESYSLDDKTGELEV 63

Query: 69  ELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ-GSGTID 128
           +L++ C+ +F+  VY+D+++K  L YG +  + G+  ++LFLW+ V GI  N   SG + 
Sbjct: 64  QLQNPCFARFENRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVL 123

Query: 129 FYVGVLSETLPAQQFQKIPACTREGCVGERTE 159
           F +GV  + +    F+  P C   G + E+ E
Sbjct: 124 FDIGVAHKQISRSLFEDPPVCYPPGSIMEKLE 146

[Close]

BLAST of Carg22684-RA vs. TAIR 10
Match: AT3G07460.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-17
Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 0


Query: 29  IALNSTDIHELLPLYGFPKGLLPNNVKSYTLSAD-GSFEIELESECYVKFDLLVYYDKIV 88
           +   +  I E+L   G P GL P  VK +T++ + G F + L   C  K++  ++YD+IV
Sbjct: 23  VIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIV 82

Query: 89  KGKLRYGSVADVSGIQAKKLFLWVSVTGIKAN-QGSGTIDFYVGVLSETLPAQQFQKIPA 148
            G + Y  + D+SGI A++LFLW+ V GI+ +   SG I F VGVL +      F+    
Sbjct: 83  SGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFE---- 142

Query: 149 CTREGCVGERTEA 160
            T   CV  R +A
Sbjct: 143 -TPRDCVAVRGDA 150

The following BLAST results are available for this feature:

BLAST of Carg22684-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022156.1	2.7e-82	100.00	hypothetical protein SDJN02_15885, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6588240.1	1.8e-81	98.75	hypothetical protein SDJN03_16805, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022933750.1	3.9e-81	98.75	uncharacterized protein LOC111441073 [Cucurbita moschata]	[more]
XP_023531629.1	1.8e-78	95.63	uncharacterized protein LOC111793813 [Cucurbita pepo subsp. pepo]	[more]
XP_023006181.1	1.3e-76	93.75	uncharacterized protein LOC111498989 [Cucurbita maxima]	[more]

BLAST of Carg22684-RA vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg22684-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5P9	1.9e-81	98.75	uncharacterized protein LOC111441073 OS=Cucurbita moschata OX=3662 GN=LOC1114410...	[more]
A0A6J1KX25	6.3e-77	93.75	uncharacterized protein LOC111498989 OS=Cucurbita maxima OX=3661 GN=LOC111498989...	[more]
A0A6J1DIG2	2.1e-56	70.93	uncharacterized protein LOC111020803 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1H9I3	5.2e-55	70.70	uncharacterized protein LOC111461358 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]
A0A5A7UJ73	5.5e-49	63.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Carg22684-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55265.1	8.2e-37	50.65	Protein of unknown function, DUF538	[more]
AT5G19860.1	1.7e-26	39.61	Protein of unknown function, DUF538	[more]
AT5G54530.1	1.8e-20	35.57	Protein of unknown function, DUF538	[more]
AT1G61667.1	1.2e-19	34.21	Protein of unknown function, DUF538	[more]
AT3G07460.1	1.5e-17	36.09	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 37..142 e-value: 2.9E-30 score: 105.0
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 10..155
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 21..149 e-value: 1.2E-31 score: 111.3
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 9..151
None	No IPR available	PANTHER	PTHR31676:SF96	EXPRESSED PROTEIN	coord: 10..155

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg22684	Carg22684	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg22684-RA:1	Carg22684-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg22684-RA:cds	Carg22684-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg22684-RA	Carg22684-RA-protein	polypeptide