Homology
BLAST of Carg22183-RA vs. NCBI nr
Match:
KAG7025541.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1685.2 bits (4363), Expect = 0.0e+00
Identity = 822/822 (100.00%), Postives = 822/822 (100.00%), Query Frame = 0
Query: 1 MSFLKRCRTLIDAKLVHQQILVNGFTNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
MSFLKRCRTLIDAKLVHQQILVNGFTNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF
Sbjct: 1 MSFLKRCRTLIDAKLVHQQILVNGFTNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
Query: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV
Sbjct: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
Query: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
Query: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
Query: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
Query: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
Query: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
Query: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
Query: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
Query: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 600
QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 600
Query: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
Query: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
Query: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 780
DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 780
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of Carg22183-RA vs. NCBI nr
Match:
XP_022960463.1 (pentatricopeptide repeat-containing protein At5g16860 [Cucurbita moschata])
HSP 1 Score: 1676.0 bits (4339), Expect = 0.0e+00
Identity = 817/822 (99.39%), Postives = 821/822 (99.88%), Query Frame = 0
Query: 1 MSFLKRCRTLIDAKLVHQQILVNGFTNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
MSFLK+CRTLIDAKLVHQQILVNGFT+LVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF
Sbjct: 1 MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
Query: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV
Sbjct: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
Query: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
Query: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
Query: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
Query: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
Query: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
Query: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
Query: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
Query: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 600
QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVK FGVAPGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600
Query: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKL+ESGAENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLMESGAENDGSYTLLS 660
Query: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
Query: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 780
DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIR+NKNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of Carg22183-RA vs. NCBI nr
Match:
KAG6593141.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1676.0 bits (4339), Expect = 0.0e+00
Identity = 817/822 (99.39%), Postives = 820/822 (99.76%), Query Frame = 0
Query: 1 MSFLKRCRTLIDAKLVHQQILVNGFTNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
MSFLKRCRTLIDAKLVHQQILVNGFT+LVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF
Sbjct: 1 MSFLKRCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
Query: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV
Sbjct: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
Query: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
Query: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
Query: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
Query: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
Query: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
Query: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAY LRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYTLRHEN 480
Query: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
Query: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 600
QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVK FGVAPGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600
Query: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKL+ESGAENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLMESGAENDGSYTLLS 660
Query: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
Query: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 780
DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIR+NKNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of Carg22183-RA vs. NCBI nr
Match:
XP_023514147.1 (pentatricopeptide repeat-containing protein At5g16860 [Cucurbita pepo subsp. pepo] >XP_023514148.1 pentatricopeptide repeat-containing protein At5g16860 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1669.8 bits (4323), Expect = 0.0e+00
Identity = 815/822 (99.15%), Postives = 820/822 (99.76%), Query Frame = 0
Query: 1 MSFLKRCRTLIDAKLVHQQILVNGFTNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
MSFLK+CRTLIDAKLVHQQILVNGFT+LVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF
Sbjct: 1 MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
Query: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
WWNALIRRSVRLGFLDD+LCFYRQMQRLGW PDHYTFPFVLKACGEKLSFRCGTSVHAMV
Sbjct: 61 WWNALIRRSVRLGFLDDSLCFYRQMQRLGWLPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
Query: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
Query: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
AALRIAFQMAKHYNF+LRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFRLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
Query: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
Query: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
Query: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
Query: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
Query: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
Query: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 600
QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVK FGVAPGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600
Query: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
Query: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
Query: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 780
DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIR+NKNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of Carg22183-RA vs. NCBI nr
Match:
XP_023004455.1 (pentatricopeptide repeat-containing protein At5g16860 [Cucurbita maxima] >XP_023004456.1 pentatricopeptide repeat-containing protein At5g16860 [Cucurbita maxima])
HSP 1 Score: 1645.6 bits (4260), Expect = 0.0e+00
Identity = 802/822 (97.57%), Postives = 816/822 (99.27%), Query Frame = 0
Query: 1 MSFLKRCRTLIDAKLVHQQILVNGFTNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
MSFLK+CRTLIDAKLVHQQILVNGFT+LVTHAIGGYIECNAF QAVSLLERLVPSHS VF
Sbjct: 1 MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFAQAVSLLERLVPSHSAVF 60
Query: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
WWNALIRRSVRLGFLDDALCFYRQM+RLGW PD+YTFPFVLKACGEKLSFRCG SVHAMV
Sbjct: 61 WWNALIRRSVRLGFLDDALCFYRQMERLGWSPDYYTFPFVLKACGEKLSFRCGASVHAMV 120
Query: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
Query: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
AALRIAFQMAKHYNFKL PDAITLVNVLPACASTFAT+HGRQVHGFAVRSGLVDDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLFPDAITLVNVLPACASTFATEHGRQVHGFAVRSGLVDDVFVGN 240
Query: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
ALVDMYAKCSKMNEANK+FEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKMFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
Query: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
NVVTWSAVIAGYSQRGHGCEALDVFRQMQ+CGLEPNVVTLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQNCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
Query: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVAR+IFDSIIGKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARSIFDSIIGKDKNVVTWTVMIG 420
Query: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
GYAQHGEANDA+ELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN
Sbjct: 421 GYAQHGEANDAIELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
Query: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
ESEVL+VANCLIDMYSKSGDIDAAQIVFDNMKV+NAVSWTSLMTGYGIHGRGEEALRVFN
Sbjct: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKVQNAVSWTSLMTGYGIHGRGEEALRVFN 540
Query: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 600
QMR+VGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVK FGVAPGAEHYACMVDLLGRA
Sbjct: 541 QMREVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600
Query: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
Query: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL+
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILA 720
Query: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 780
DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIR+NKNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of Carg22183-RA vs. ExPASy Swiss-Prot
Match:
Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)
HSP 1 Score: 1057.7 bits (2734), Expect = 6.5e-308
Identity = 510/822 (62.04%), Postives = 626/822 (76.16%), Query Frame = 0
Query: 3 FLKRCRTLIDAKLVHQQILVNGF--TNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 62
F+ +C+T+ KL+HQ++L G NL +H I YI AVSLL R PS + V+
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVY 93
Query: 63 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 122
WN+LIR G + L + M L W PD+YTFPFV KACGE S RCG S HA+
Sbjct: 94 HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 123 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 182
GF SNVF+ N++VAMY RC +L DAR+VFDE+ + D+VSWNSI+ +Y + G+ K
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM---SVWDVVSWNSIIESYAKLGKPK 213
Query: 183 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 242
AL + +M F RPD ITLVNVLP CAS G+Q+H FAV S ++ ++FVGN
Sbjct: 214 VALEMFSRMTN--EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 273
Query: 243 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 302
LVDMYAKC M+EAN VF M KDVVSWNA+V GYSQIG F+DA+ LF++MQEE I++
Sbjct: 274 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 333
Query: 303 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 362
+VVTWSA I+GY+QRG G EAL V RQM G++PN VTL+S+LSGCASVGAL+HGK+ H
Sbjct: 334 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 393
Query: 363 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 422
YAIK ++L + GD+ MV N LIDMYAKCK AR +FDS+ K+++VVTWTVMIG
Sbjct: 394 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 453
Query: 423 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 482
GY+QHG+AN A+EL S+MF+++ +PNAFT+SCAL+ACA L ALR+GKQIHAYALR++
Sbjct: 454 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 513
Query: 483 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 542
+ L V+NCLIDMY+K G I A++VFDNM +N V+WTSLMTGYG+HG GEEAL +F+
Sbjct: 514 NAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 573
Query: 543 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 602
+MR++G +DGVT LVVLYACSHSGM+DQGM YF+ M FGV+PG EHYAC+VDLLGRA
Sbjct: 574 EMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRA 633
Query: 603 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 662
GRLN A+ LI+ MPMEP PVVWVA LS R H VELGEYAA K+ E + +DGSYTLLS
Sbjct: 634 GRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLS 693
Query: 663 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 722
NLYANA RWKDV RIR LM+H G+KKRPGCSWV+G K TTTFFVGDK+HP + +IY +L
Sbjct: 694 NLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLL 753
Query: 723 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 782
D +QRIKD+GYVP+T FALHDVDDEEK DLLFEHSEKLA+AYGILT+ G IR+ KNLR
Sbjct: 754 DHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLR 813
Query: 783 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
+CGDCH+A TY+S II+H+IILRDSSRFHHFK GSCSC+GYW
Sbjct: 814 VCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
BLAST of Carg22183-RA vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 560.1 bits (1442), Expect = 4.2e-158
Identity = 304/827 (36.76%), Postives = 465/827 (56.23%), Query Frame = 0
Query: 2 SFLKRC---RTLIDAKLVHQQILVNGF---TNLVTHAIGGYIECNAFGQAVSLLERLVPS 61
S L+ C ++L D K V I NGF +NL + Y C +A + + +
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV--K 158
Query: 62 HSTVFWWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTS 121
+WN L+ + G ++ +++M G D YTF V K+ S G
Sbjct: 159 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 218
Query: 122 VHAMVCAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQ 181
+H + GF + NS+VA Y + +D AR+VFDE+ ER D++SWNSI+ YV
Sbjct: 219 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER---DVISWNSIINGYVS 278
Query: 182 GGESKAALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDD 241
G ++ L + QM + D T+V+V CA + GR VH V++ +
Sbjct: 279 NGLAEKGLSVFVQMLVS---GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 338
Query: 242 VFVGNALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQE 301
N L+DMY+KC ++ A VF +M ++ VVS+ +++ GY++ G +A+ LF+ M+E
Sbjct: 339 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 398
Query: 302 EDIELNVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLH 361
E G+ P+V T+ ++L+ CA L
Sbjct: 399 E-----------------------------------GISPDVYTVTAVLNCCARYRLLDE 458
Query: 362 GKQTHAYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTW 421
GK+ H + +N D G D+ V N L+DMYAKC S + A +F + + K++++W
Sbjct: 459 GKRVHEWIKEN-------DLGFDIFVSNALMDMYAKCGSMQEAELVFSEM--RVKDIISW 518
Query: 422 TVMIGGYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYA 481
+IGGY+++ AN+A+ LF+ + +E P+ T++C L ACA L A G++IH Y
Sbjct: 519 NTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 578
Query: 482 LRHENESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEA 541
+R+ S+ HVAN L+DMY+K G + A ++FD++ ++ VSWT ++ GYG+HG G+EA
Sbjct: 579 MRNGYFSD-RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEA 638
Query: 542 LRVFNQMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVD 601
+ +FNQMRQ G+ D ++F+ +LYACSHSG+VD+G +F+ M + P EHYAC+VD
Sbjct: 639 IALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVD 698
Query: 602 LLGRAGRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGS 661
+L R G L +A I++MP+ P +W ALL R H +V+L E A K+ E EN G
Sbjct: 699 MLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 758
Query: 662 YTLLSNLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQI 721
Y L++N+YA A +W+ V R+R+ + G++K PGCSW++ K F GD S+P+++ I
Sbjct: 759 YVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENI 818
Query: 722 YNILSDLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRV 781
L + R+ + GY P T +AL D ++ EK + L HSEKLA+A GI++S G+ IRV
Sbjct: 819 EAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRV 871
Query: 782 NKNLRICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
KNLR+CGDCH ++S + EI+LRDS+RFH FK G CSCRG+W
Sbjct: 879 TKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
BLAST of Carg22183-RA vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 542.0 bits (1395), Expect = 1.2e-152
Identity = 303/859 (35.27%), Postives = 471/859 (54.83%), Query Frame = 0
Query: 2 SFLKRCRTLIDAKLVHQQILVNGFTN---LVTHAIGGYIECNAFGQAVSLLERLV---PS 61
S LK C+T+ + K+ H+ + G N +T + E +++S + + S
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGT-RESLSFAKEVFENSES 96
Query: 62 HSTVFWWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTS 121
+ T F +N+LIR G ++A+ + +M G PD YTFPF L AC + + G
Sbjct: 97 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 156
Query: 122 VHAMVCAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQ 181
+H ++ G+ ++F+ NS+V Y CG LD AR+VFDE+ ER ++VSW S++ Y +
Sbjct: 157 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER---NVVSWTSMICGYAR 216
Query: 182 GGESKAALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGL-VD 241
+K A+ + F+M + + ++ P+++T+V V+ ACA + G +V+ F SG+ V+
Sbjct: 217 RDFAKDAVDLFFRMVR--DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 276
Query: 242 DVFVGNALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQ 301
D+ V +ALVDMY KC+ ++ A ++F++ ++ NA+
Sbjct: 277 DLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA-------------------- 336
Query: 302 EEDIELNVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALL 361
+ Y ++G EAL VF M G+ P+ ++++S +S C+ + +L
Sbjct: 337 ---------------SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 396
Query: 362 HGKQTHAYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVT 421
GK H Y ++N W + + N LIDMY KC A IFD + +K VVT
Sbjct: 397 WGKSCHGYVLRNGFE-SWDN------ICNALIDMYMKCHRQDTAFRIFDRM--SNKTVVT 456
Query: 422 WTVMIGGYAQHGEAN-------------------------------DAVELFSQMFKQET 481
W ++ GY ++GE + +A+E+F M QE
Sbjct: 457 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQE- 516
Query: 482 SLKPNAFTLSCALMACARLGALRLGKQIHAYALRHENESEVLHVANCLIDMYSKSGDIDA 541
+ + T+ AC LGAL L K I+ Y ++ + +V + L+DM+S+ GD ++
Sbjct: 517 GVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV-RLGTTLVDMFSRCGDPES 576
Query: 542 AQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFNQMRQVGLSVDGVTFLVVLYACSH 601
A +F+++ R+ +WT+ + + G E A+ +F+ M + GL DGV F+ L ACSH
Sbjct: 577 AMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSH 636
Query: 602 SGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRAGRLNEAMELIKSMPMEPTPVVWV 661
G+V QG F+ M+K GV+P HY CMVDLLGRAG L EA++LI+ MPMEP V+W
Sbjct: 637 GGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWN 696
Query: 662 ALLSASRTHANVELGEYAASKLIESGAENDGSYTLLSNLYANARRWKDVARIRRLMKHTG 721
+LL+A R NVE+ YAA K+ E GSY LLSN+YA+A RW D+A++R MK G
Sbjct: 697 SLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKG 756
Query: 722 IKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILSDLIQRIKDMGYVPQTSFALHDVD 781
++K PG S +Q + T F GD+SHP+ I +L ++ QR +G+VP S L DVD
Sbjct: 757 LRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVD 816
Query: 782 DEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLRICGDCHSALTYISMIIEHEIILR 823
++EK +L HSEKLA+AYG+++S G IR+ KNLR+C DCHS + S + EIILR
Sbjct: 817 EKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILR 842
BLAST of Carg22183-RA vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 542.0 bits (1395), Expect = 1.2e-152
Identity = 294/822 (35.77%), Postives = 461/822 (56.08%), Query Frame = 0
Query: 4 LKRCRTLIDAKLVHQQILVNGFTN---LVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 63
L+RC +L + + + + NG T + + + +A + E + + ++
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 64 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 123
+ +++ ++ LD AL F+ +M+ P Y F ++LK CG++ R G +H ++
Sbjct: 104 --HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 163
Query: 124 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 183
GF ++F + MY +C +++AR+VFD + ER D+VSWN+I+A Y Q G ++
Sbjct: 164 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER---DLVSWNTIVAGYSQNGMAR 223
Query: 184 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 243
AL + M + L+P IT+V+VLPA ++ G+++HG+A+RSG V +
Sbjct: 224 MALEMVKSMCEE---NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 283
Query: 244 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 303
ALVDMYAKC + A ++F+ M E++VVSWN+++ Y Q + +A+ +F++M +E
Sbjct: 284 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE---- 343
Query: 304 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 363
G++P V+++ L CA +G L G+ H
Sbjct: 344 -------------------------------GVKPTDVSVMGALHACADLGDLERGRFIH 403
Query: 364 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 423
+++ L LD ++ V N LI MY KCK A ++F + + + +V+W MI
Sbjct: 404 KLSVE--LGLD-----RNVSVVNSLISMYCKCKEVDTAASMFGKL--QSRTLVSWNAMIL 463
Query: 424 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 483
G+AQ+G DA+ FSQM + ++KP+ FT + A A L K IH +R
Sbjct: 464 GFAQNGRPIDALNYFSQM--RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 523
Query: 484 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 543
+ V V L+DMY+K G I A+++FD M R+ +W +++ GYG HG G+ AL +F
Sbjct: 524 DKNVF-VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFE 583
Query: 544 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 603
+M++ + +GVTFL V+ ACSHSG+V+ G+ F+ M + + + +HY MVDLLGRA
Sbjct: 584 EMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRA 643
Query: 604 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 663
GRLNEA + I MP++P V+ A+L A + H NV E AA +L E ++ G + LL+
Sbjct: 644 GRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLA 703
Query: 664 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 723
N+Y A W+ V ++R M G++K PGCS V+ K +FF G +HP S +IY L
Sbjct: 704 NIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLE 763
Query: 724 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 783
LI IK+ GYVP T+ L V+++ K LL HSEKLA+++G+L + G I V KNLR
Sbjct: 764 KLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLR 809
Query: 784 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
+C DCH+A YIS++ EI++RD RFHHFK G+CSC YW
Sbjct: 824 VCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of Carg22183-RA vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 541.2 bits (1393), Expect = 2.0e-152
Identity = 290/721 (40.22%), Postives = 431/721 (59.78%), Query Frame = 0
Query: 130 FICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESKAALRIAFQM 189
F N+V++ Y + G +D + FD++ +R D VSW +++ Y G+ A+R+ M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQR---DSVSWTTMIVGYKNIGQYHKAIRVMGDM 140
Query: 190 AKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGNALVDMYAKC 249
K + P TL NVL + A+T + G++VH F V+ GL +V V N+L++MYAKC
Sbjct: 141 VKE---GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 200
Query: 250 SKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIELNVVTWSAVI 309
A VF++M +D+ SWNA++ + Q+G D A++ F++M E DI VTW+++I
Sbjct: 201 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI----VTWNSMI 260
Query: 310 AGYSQRGHGCEALDVFRQM-QHCGLEPNVVTLVSLLSGCASVGALLHGKQTHAYAIK--- 369
+G++QRG+ ALD+F +M + L P+ TL S+LS CA++ L GKQ H++ +
Sbjct: 261 SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGF 320
Query: 370 -------NILNLDWSDPG--------------DDMMV--FNGLIDMYAKCKSSRVARNIF 429
N L +S G D+ + F L+D Y K A+NIF
Sbjct: 321 DISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIF 380
Query: 430 DSIIGKDKNVVTWTVMIGGYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARL 489
S+ KD++VV WT MI GY QHG +A+ LF M +PN++TL+ L + L
Sbjct: 381 VSL--KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV--GGGQRPNSYTLAAMLSVASSL 440
Query: 490 GALRLGKQIHAYALRHENESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKV-RNAVSWTS 549
+L GKQIH A++ E + V+N LI MY+K+G+I +A FD ++ R+ VSWTS
Sbjct: 441 ASLSHGKQIHGSAVK-SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTS 500
Query: 550 LMTGYGIHGRGEEALRVFNQMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCF 609
++ HG EEAL +F M GL D +T++ V AC+H+G+V+QG YF M
Sbjct: 501 MIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVD 560
Query: 610 GVAPGAEHYACMVDLLGRAGRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYA 669
+ P HYACMVDL GRAG L EA E I+ MP+EP V W +LLSA R H N++LG+ A
Sbjct: 561 KIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVA 620
Query: 670 ASKLIESGAENDGSYTLLSNLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTT 729
A +L+ EN G+Y+ L+NLY+ +W++ A+IR+ MK +KK G SW++ K
Sbjct: 621 AERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHV 680
Query: 730 FFVGDKSHPQSDQIYNILSDLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVA 789
F V D +HP+ ++IY + + IK MGYVP T+ LHD+++E K +L HSEKLA+A
Sbjct: 681 FGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIA 740
Query: 790 YGILTSAPGQPIRVNKNLRICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGY 823
+G++++ +R+ KNLR+C DCH+A+ +IS ++ EII+RD++RFHHFK G CSCR Y
Sbjct: 741 FGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDY 786
BLAST of Carg22183-RA vs. ExPASy TrEMBL
Match:
A0A6J1H912 (pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita moschata OX=3662 GN=LOC111461191 PE=3 SV=1)
HSP 1 Score: 1676.0 bits (4339), Expect = 0.0e+00
Identity = 817/822 (99.39%), Postives = 821/822 (99.88%), Query Frame = 0
Query: 1 MSFLKRCRTLIDAKLVHQQILVNGFTNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
MSFLK+CRTLIDAKLVHQQILVNGFT+LVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF
Sbjct: 1 MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
Query: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV
Sbjct: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
Query: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
Query: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
Query: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
Query: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
Query: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
Query: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
Query: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
Query: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 600
QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVK FGVAPGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600
Query: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKL+ESGAENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLMESGAENDGSYTLLS 660
Query: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
Query: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 780
DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIR+NKNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of Carg22183-RA vs. ExPASy TrEMBL
Match:
A0A6J1KUL7 (pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita maxima OX=3661 GN=LOC111497759 PE=3 SV=1)
HSP 1 Score: 1645.6 bits (4260), Expect = 0.0e+00
Identity = 802/822 (97.57%), Postives = 816/822 (99.27%), Query Frame = 0
Query: 1 MSFLKRCRTLIDAKLVHQQILVNGFTNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
MSFLK+CRTLIDAKLVHQQILVNGFT+LVTHAIGGYIECNAF QAVSLLERLVPSHS VF
Sbjct: 1 MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFAQAVSLLERLVPSHSAVF 60
Query: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
WWNALIRRSVRLGFLDDALCFYRQM+RLGW PD+YTFPFVLKACGEKLSFRCG SVHAMV
Sbjct: 61 WWNALIRRSVRLGFLDDALCFYRQMERLGWSPDYYTFPFVLKACGEKLSFRCGASVHAMV 120
Query: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
Query: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
AALRIAFQMAKHYNFKL PDAITLVNVLPACASTFAT+HGRQVHGFAVRSGLVDDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLFPDAITLVNVLPACASTFATEHGRQVHGFAVRSGLVDDVFVGN 240
Query: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
ALVDMYAKCSKMNEANK+FEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKMFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
Query: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
NVVTWSAVIAGYSQRGHGCEALDVFRQMQ+CGLEPNVVTLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQNCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
Query: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVAR+IFDSIIGKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARSIFDSIIGKDKNVVTWTVMIG 420
Query: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
GYAQHGEANDA+ELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN
Sbjct: 421 GYAQHGEANDAIELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
Query: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
ESEVL+VANCLIDMYSKSGDIDAAQIVFDNMKV+NAVSWTSLMTGYGIHGRGEEALRVFN
Sbjct: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKVQNAVSWTSLMTGYGIHGRGEEALRVFN 540
Query: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 600
QMR+VGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVK FGVAPGAEHYACMVDLLGRA
Sbjct: 541 QMREVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600
Query: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
Query: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL+
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILA 720
Query: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 780
DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIR+NKNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of Carg22183-RA vs. ExPASy TrEMBL
Match:
A0A6J1CPQ5 (pentatricopeptide repeat-containing protein At5g16860 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013040 PE=3 SV=1)
HSP 1 Score: 1505.0 bits (3895), Expect = 0.0e+00
Identity = 733/822 (89.17%), Postives = 772/822 (93.92%), Query Frame = 0
Query: 1 MSFLKRCRTLIDAKLVHQQILVNGFTNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
+S L++CRTLI+AKL HQQILVNGFT +VT+AIG YIEC A QAVSLL+RL+PSHSTVF
Sbjct: 31 ISLLQQCRTLINAKLAHQQILVNGFTQMVTYAIGAYIECGASAQAVSLLQRLIPSHSTVF 90
Query: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
WWNALIRRSVRLGFLDD L FY QMQRLGW PDHYTFPFVLKACGE SFR G SVHA+V
Sbjct: 91 WWNALIRRSVRLGFLDDVLGFYCQMQRLGWSPDHYTFPFVLKACGEIPSFRRGASVHAVV 150
Query: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
CA GFESNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGGESK
Sbjct: 151 CANGFESNVFICNSIVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGESK 210
Query: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
ALRIA +MA HYN KL PDAITLVN+LPACAST A QHG+QVHG+AVRSGLVDDVFVGN
Sbjct: 211 TALRIAVRMANHYNCKLLPDAITLVNILPACASTLAPQHGKQVHGYAVRSGLVDDVFVGN 270
Query: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
ALVDMYAKC KM+EA++VFE MKEKDVVSWNA+VTGYSQI FDDALSLFKRMQEEDIEL
Sbjct: 271 ALVDMYAKCWKMDEASRVFELMKEKDVVSWNAMVTGYSQISRFDDALSLFKRMQEEDIEL 330
Query: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
NVVTWSA+IAGYSQRG G EALDVFRQMQ CGLEPNVVTLVSLLSGCASVGALLHGKQTH
Sbjct: 331 NVVTWSALIAGYSQRGLGFEALDVFRQMQLCGLEPNVVTLVSLLSGCASVGALLHGKQTH 390
Query: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
AYAIKNILN DW+DPGDD+MV NGLIDMYAKCKSS+VARNIFD I K+KNVVTWTVMIG
Sbjct: 391 AYAIKNILNFDWNDPGDDLMVLNGLIDMYAKCKSSKVARNIFDLITRKNKNVVTWTVMIG 450
Query: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
GYAQHGEANDA+ELFSQMFK ETSLKPNAFTLSCALMACARLGALRLG+QIHAYALRHEN
Sbjct: 451 GYAQHGEANDALELFSQMFKHETSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 510
Query: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
E+EVL+VANCLIDMYSKSGDIDAAQ VFDNMKVRNAVSWTSLMTGYG+HGRGEEAL +F+
Sbjct: 511 ENEVLYVANCLIDMYSKSGDIDAAQTVFDNMKVRNAVSWTSLMTGYGMHGRGEEALHIFD 570
Query: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 600
QM+Q L+VDGVTFLVVLYACSHSGMVDQGMNYFHGM+K FGVAPGAEHYACMVDLLGRA
Sbjct: 571 QMQQADLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMIKYFGVAPGAEHYACMVDLLGRA 630
Query: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
GRLNEAMELIKSM EPT VVWVALLSASR HANVELGEYAA+KLIESG ENDGSYTLLS
Sbjct: 631 GRLNEAMELIKSMSTEPTAVVWVALLSASRIHANVELGEYAANKLIESGLENDGSYTLLS 690
Query: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
NLYANARRWKDVARIR LMKHTGIKKRPGCSWVQGKK TTTFFVGD+SHPQSDQIY IL+
Sbjct: 691 NLYANARRWKDVARIRSLMKHTGIKKRPGCSWVQGKKGTTTFFVGDRSHPQSDQIYGILA 750
Query: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 780
DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTS+PGQPIR+NKNLR
Sbjct: 751 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSSPGQPIRINKNLR 810
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFK GSCSCRGYW
Sbjct: 811 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKNGSCSCRGYW 852
BLAST of Carg22183-RA vs. ExPASy TrEMBL
Match:
A0A1S3C0G3 (pentatricopeptide repeat-containing protein At5g16860 OS=Cucumis melo OX=3656 GN=LOC103495413 PE=3 SV=1)
HSP 1 Score: 1469.1 bits (3802), Expect = 0.0e+00
Identity = 702/822 (85.40%), Postives = 771/822 (93.80%), Query Frame = 0
Query: 1 MSFLKRCRTLIDAKLVHQQILVNGFTNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
+S L++C+TLI+AKL HQQI V+GFT + ++A+G YIEC A +AVSLL+R++PSHSTVF
Sbjct: 47 ISLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGAYIECGASAEAVSLLQRIIPSHSTVF 106
Query: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
WWNALIRRSVRLG LDD L FY QMQ LGW PDHYTFPFVLKACGE SFR G SVHA+V
Sbjct: 107 WWNALIRRSVRLGLLDDTLGFYCQMQSLGWLPDHYTFPFVLKACGEIPSFRHGASVHAVV 166
Query: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
CA GFESNVFICNS+VAMYGRCGALDDARQ+FDEVLER+I+DIVSWNSILAAYVQGG+S+
Sbjct: 167 CAKGFESNVFICNSIVAMYGRCGALDDARQMFDEVLERRIEDIVSWNSILAAYVQGGKSR 226
Query: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
ALRIAFQM HY+ KLRPDAITLVN+LPACAS FA QHG+QVHGF+VRSGLVDDVFVGN
Sbjct: 227 TALRIAFQMGNHYSLKLRPDAITLVNILPACASIFAIQHGKQVHGFSVRSGLVDDVFVGN 286
Query: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
ALV MYAKCSKMNEANKVFE++K+KDVVSWNA+VTGYSQIGSFD ALSLFK MQEEDI+L
Sbjct: 287 ALVSMYAKCSKMNEANKVFERIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKL 346
Query: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
+V+TWSAVIAGY+Q+GHG EALDVFRQMQ GLEPNVVTLVSLLSGCASVGALL+GKQTH
Sbjct: 347 DVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLVSLLSGCASVGALLYGKQTH 406
Query: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
AY IKNILNL+WSD GDDM+V NGLIDMYAKCKS RVARNIFDSI GKDK+VVTWTVMIG
Sbjct: 407 AYVIKNILNLNWSDKGDDMLVLNGLIDMYAKCKSYRVARNIFDSIAGKDKDVVTWTVMIG 466
Query: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
GYAQHGEANDA++LF+Q+F+Q+TSLKPNAFTLSCALMACARLG LRLG+Q+HAYALR+EN
Sbjct: 467 GYAQHGEANDALQLFAQIFEQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNEN 526
Query: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
ESEVL+VANCLIDMYSKSGDIDAA+ VF+NMK+RN VSWTSLMTGYG+HGRGEEAL VF+
Sbjct: 527 ESEVLYVANCLIDMYSKSGDIDAARAVFNNMKLRNVVSWTSLMTGYGMHGRGEEALHVFD 586
Query: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 600
QMRQ+G VDG+TFLVVLYACSHSG+VDQGMNYFH MVKCFG+ PGAEHYACMVDLLGRA
Sbjct: 587 QMRQLGFVVDGITFLVVLYACSHSGLVDQGMNYFHDMVKCFGITPGAEHYACMVDLLGRA 646
Query: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
GRLNEAMELIKSM MEPT VVWVALLSASR HAN+ELGEYAASKLIE GAENDGSYTLLS
Sbjct: 647 GRLNEAMELIKSMSMEPTAVVWVALLSASRIHANIELGEYAASKLIELGAENDGSYTLLS 706
Query: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
NLYANARRWKDVARIR LMKHTGI+KRPGCSW+QGKKSTTTFFVGD+SHP+S+QIYN+LS
Sbjct: 707 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLS 766
Query: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 780
DLI+RIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILT+APGQPIR++KNLR
Sbjct: 767 DLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLR 826
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMII+HEIILRDSSRFHHFKKGSCSCR YW
Sbjct: 827 ICGDCHSALTYISMIIDHEIILRDSSRFHHFKKGSCSCRSYW 868
BLAST of Carg22183-RA vs. ExPASy TrEMBL
Match:
A0A6J1CP62 (pentatricopeptide repeat-containing protein At5g16860 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013040 PE=3 SV=1)
HSP 1 Score: 1464.1 bits (3789), Expect = 0.0e+00
Identity = 713/795 (89.69%), Postives = 748/795 (94.09%), Query Frame = 0
Query: 28 LVTHAIGGYIECNAFGQAVSLLERLVPSHSTVFWWNALIRRSVRLGFLDDALCFYRQMQR 87
+VT+AIG YIEC A QAVSLL+RL+PSHSTVFWWNALIRRSVRLGFLDD L FY QMQR
Sbjct: 1 MVTYAIGAYIECGASAQAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDVLGFYCQMQR 60
Query: 88 LGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMVCAYGFESNVFICNSVVAMYGRCGALDD 147
LGW PDHYTFPFVLKACGE SFR G SVHA+VCA GFESNVFICNS+VAMYGRCGALDD
Sbjct: 61 LGWSPDHYTFPFVLKACGEIPSFRRGASVHAVVCANGFESNVFICNSIVAMYGRCGALDD 120
Query: 148 ARQVFDEVLERKIDDIVSWNSILAAYVQGGESKAALRIAFQMAKHYNFKLRPDAITLVNV 207
ARQVFDEVLERKI+DIVSWNSILAAYVQGGESK ALRIA +MA HYN KL PDAITLVN+
Sbjct: 121 ARQVFDEVLERKIEDIVSWNSILAAYVQGGESKTALRIAVRMANHYNCKLLPDAITLVNI 180
Query: 208 LPACASTFATQHGRQVHGFAVRSGLVDDVFVGNALVDMYAKCSKMNEANKVFEQMKEKDV 267
LPACAST A QHG+QVHG+AVRSGLVDDVFVGNALVDMYAKC KM+EA++VFE MKEKDV
Sbjct: 181 LPACASTLAPQHGKQVHGYAVRSGLVDDVFVGNALVDMYAKCWKMDEASRVFELMKEKDV 240
Query: 268 VSWNALVTGYSQIGSFDDALSLFKRMQEEDIELNVVTWSAVIAGYSQRGHGCEALDVFRQ 327
VSWNA+VTGYSQI FDDALSLFKRMQEEDIELNVVTWSA+IAGYSQRG G EALDVFRQ
Sbjct: 241 VSWNAMVTGYSQISRFDDALSLFKRMQEEDIELNVVTWSALIAGYSQRGLGFEALDVFRQ 300
Query: 328 MQHCGLEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNLDWSDPGDDMMVFNGLID 387
MQ CGLEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILN DW+DPGDD+MV NGLID
Sbjct: 301 MQLCGLEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNFDWNDPGDDLMVLNGLID 360
Query: 388 MYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIGGYAQHGEANDAVELFSQMFKQETSLKP 447
MYAKCKSS+VARNIFD I K+KNVVTWTVMIGGYAQHGEANDA+ELFSQMFK ETSLKP
Sbjct: 361 MYAKCKSSKVARNIFDLITRKNKNVVTWTVMIGGYAQHGEANDALELFSQMFKHETSLKP 420
Query: 448 NAFTLSCALMACARLGALRLGKQIHAYALRHENESEVLHVANCLIDMYSKSGDIDAAQIV 507
NAFTLSCALMACARLGALRLG+QIHAYALRHENE+EVL+VANCLIDMYSKSGDIDAAQ V
Sbjct: 421 NAFTLSCALMACARLGALRLGRQIHAYALRHENENEVLYVANCLIDMYSKSGDIDAAQTV 480
Query: 508 FDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFNQMRQVGLSVDGVTFLVVLYACSHSGMV 567
FDNMKVRNAVSWTSLMTGYG+HGRGEEAL +F+QM+Q L+VDGVTFLVVLYACSHSGMV
Sbjct: 481 FDNMKVRNAVSWTSLMTGYGMHGRGEEALHIFDQMQQADLAVDGVTFLVVLYACSHSGMV 540
Query: 568 DQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRAGRLNEAMELIKSMPMEPTPVVWVALLS 627
DQGMNYFHGM+K FGVAPGAEHYACMVDLLGRAGRLNEAMELIKSM EPT VVWVALLS
Sbjct: 541 DQGMNYFHGMIKYFGVAPGAEHYACMVDLLGRAGRLNEAMELIKSMSTEPTAVVWVALLS 600
Query: 628 ASRTHANVELGEYAASKLIESGAENDGSYTLLSNLYANARRWKDVARIRRLMKHTGIKKR 687
ASR HANVELGEYAA+KLIESG ENDGSYTLLSNLYANARRWKDVARIR LMKHTGIKKR
Sbjct: 601 ASRIHANVELGEYAANKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIKKR 660
Query: 688 PGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILSDLIQRIKDMGYVPQTSFALHDVDDEEK 747
PGCSWVQGKK TTTFFVGD+SHPQSDQIY IL+DLIQRIKDMGYVPQTSFALHDVDDEEK
Sbjct: 661 PGCSWVQGKKGTTTFFVGDRSHPQSDQIYGILADLIQRIKDMGYVPQTSFALHDVDDEEK 720
Query: 748 GDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLRICGDCHSALTYISMIIEHEIILRDSSR 807
GDLLFEHSEKLAVAYGILTS+PGQPIR+NKNLRICGDCHSALTYISMIIEHEIILRDSSR
Sbjct: 721 GDLLFEHSEKLAVAYGILTSSPGQPIRINKNLRICGDCHSALTYISMIIEHEIILRDSSR 780
Query: 808 FHHFKKGSCSCRGYW 823
FHHFK GSCSCRGYW
Sbjct: 781 FHHFKNGSCSCRGYW 795
BLAST of Carg22183-RA vs. TAIR 10
Match:
AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 1057.7 bits (2734), Expect = 4.6e-309
Identity = 510/822 (62.04%), Postives = 626/822 (76.16%), Query Frame = 0
Query: 3 FLKRCRTLIDAKLVHQQILVNGF--TNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 62
F+ +C+T+ KL+HQ++L G NL +H I YI AVSLL R PS + V+
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVY 93
Query: 63 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 122
WN+LIR G + L + M L W PD+YTFPFV KACGE S RCG S HA+
Sbjct: 94 HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 123 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 182
GF SNVF+ N++VAMY RC +L DAR+VFDE+ + D+VSWNSI+ +Y + G+ K
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM---SVWDVVSWNSIIESYAKLGKPK 213
Query: 183 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 242
AL + +M F RPD ITLVNVLP CAS G+Q+H FAV S ++ ++FVGN
Sbjct: 214 VALEMFSRMTN--EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 273
Query: 243 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 302
LVDMYAKC M+EAN VF M KDVVSWNA+V GYSQIG F+DA+ LF++MQEE I++
Sbjct: 274 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 333
Query: 303 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 362
+VVTWSA I+GY+QRG G EAL V RQM G++PN VTL+S+LSGCASVGAL+HGK+ H
Sbjct: 334 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 393
Query: 363 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 422
YAIK ++L + GD+ MV N LIDMYAKCK AR +FDS+ K+++VVTWTVMIG
Sbjct: 394 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 453
Query: 423 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 482
GY+QHG+AN A+EL S+MF+++ +PNAFT+SCAL+ACA L ALR+GKQIHAYALR++
Sbjct: 454 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 513
Query: 483 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 542
+ L V+NCLIDMY+K G I A++VFDNM +N V+WTSLMTGYG+HG GEEAL +F+
Sbjct: 514 NAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 573
Query: 543 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 602
+MR++G +DGVT LVVLYACSHSGM+DQGM YF+ M FGV+PG EHYAC+VDLLGRA
Sbjct: 574 EMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRA 633
Query: 603 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 662
GRLN A+ LI+ MPMEP PVVWVA LS R H VELGEYAA K+ E + +DGSYTLLS
Sbjct: 634 GRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLS 693
Query: 663 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 722
NLYANA RWKDV RIR LM+H G+KKRPGCSWV+G K TTTFFVGDK+HP + +IY +L
Sbjct: 694 NLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLL 753
Query: 723 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 782
D +QRIKD+GYVP+T FALHDVDDEEK DLLFEHSEKLA+AYGILT+ G IR+ KNLR
Sbjct: 754 DHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLR 813
Query: 783 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
+CGDCH+A TY+S II+H+IILRDSSRFHHFK GSCSC+GYW
Sbjct: 814 VCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
BLAST of Carg22183-RA vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 560.1 bits (1442), Expect = 3.0e-159
Identity = 304/827 (36.76%), Postives = 465/827 (56.23%), Query Frame = 0
Query: 2 SFLKRC---RTLIDAKLVHQQILVNGF---TNLVTHAIGGYIECNAFGQAVSLLERLVPS 61
S L+ C ++L D K V I NGF +NL + Y C +A + + +
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV--K 158
Query: 62 HSTVFWWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTS 121
+WN L+ + G ++ +++M G D YTF V K+ S G
Sbjct: 159 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 218
Query: 122 VHAMVCAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQ 181
+H + GF + NS+VA Y + +D AR+VFDE+ ER D++SWNSI+ YV
Sbjct: 219 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER---DVISWNSIINGYVS 278
Query: 182 GGESKAALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDD 241
G ++ L + QM + D T+V+V CA + GR VH V++ +
Sbjct: 279 NGLAEKGLSVFVQMLVS---GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 338
Query: 242 VFVGNALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQE 301
N L+DMY+KC ++ A VF +M ++ VVS+ +++ GY++ G +A+ LF+ M+E
Sbjct: 339 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 398
Query: 302 EDIELNVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLH 361
E G+ P+V T+ ++L+ CA L
Sbjct: 399 E-----------------------------------GISPDVYTVTAVLNCCARYRLLDE 458
Query: 362 GKQTHAYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTW 421
GK+ H + +N D G D+ V N L+DMYAKC S + A +F + + K++++W
Sbjct: 459 GKRVHEWIKEN-------DLGFDIFVSNALMDMYAKCGSMQEAELVFSEM--RVKDIISW 518
Query: 422 TVMIGGYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYA 481
+IGGY+++ AN+A+ LF+ + +E P+ T++C L ACA L A G++IH Y
Sbjct: 519 NTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 578
Query: 482 LRHENESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEA 541
+R+ S+ HVAN L+DMY+K G + A ++FD++ ++ VSWT ++ GYG+HG G+EA
Sbjct: 579 MRNGYFSD-RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEA 638
Query: 542 LRVFNQMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVD 601
+ +FNQMRQ G+ D ++F+ +LYACSHSG+VD+G +F+ M + P EHYAC+VD
Sbjct: 639 IALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVD 698
Query: 602 LLGRAGRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGS 661
+L R G L +A I++MP+ P +W ALL R H +V+L E A K+ E EN G
Sbjct: 699 MLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 758
Query: 662 YTLLSNLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQI 721
Y L++N+YA A +W+ V R+R+ + G++K PGCSW++ K F GD S+P+++ I
Sbjct: 759 YVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENI 818
Query: 722 YNILSDLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRV 781
L + R+ + GY P T +AL D ++ EK + L HSEKLA+A GI++S G+ IRV
Sbjct: 819 EAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRV 871
Query: 782 NKNLRICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
KNLR+CGDCH ++S + EI+LRDS+RFH FK G CSCRG+W
Sbjct: 879 TKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
BLAST of Carg22183-RA vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 542.0 bits (1395), Expect = 8.5e-154
Identity = 294/822 (35.77%), Postives = 461/822 (56.08%), Query Frame = 0
Query: 4 LKRCRTLIDAKLVHQQILVNGFTN---LVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 63
L+RC +L + + + + NG T + + + +A + E + + ++
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 64 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 123
+ +++ ++ LD AL F+ +M+ P Y F ++LK CG++ R G +H ++
Sbjct: 104 --HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 163
Query: 124 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 183
GF ++F + MY +C +++AR+VFD + ER D+VSWN+I+A Y Q G ++
Sbjct: 164 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER---DLVSWNTIVAGYSQNGMAR 223
Query: 184 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 243
AL + M + L+P IT+V+VLPA ++ G+++HG+A+RSG V +
Sbjct: 224 MALEMVKSMCEE---NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 283
Query: 244 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 303
ALVDMYAKC + A ++F+ M E++VVSWN+++ Y Q + +A+ +F++M +E
Sbjct: 284 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE---- 343
Query: 304 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 363
G++P V+++ L CA +G L G+ H
Sbjct: 344 -------------------------------GVKPTDVSVMGALHACADLGDLERGRFIH 403
Query: 364 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 423
+++ L LD ++ V N LI MY KCK A ++F + + + +V+W MI
Sbjct: 404 KLSVE--LGLD-----RNVSVVNSLISMYCKCKEVDTAASMFGKL--QSRTLVSWNAMIL 463
Query: 424 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 483
G+AQ+G DA+ FSQM + ++KP+ FT + A A L K IH +R
Sbjct: 464 GFAQNGRPIDALNYFSQM--RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 523
Query: 484 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 543
+ V V L+DMY+K G I A+++FD M R+ +W +++ GYG HG G+ AL +F
Sbjct: 524 DKNVF-VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFE 583
Query: 544 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 603
+M++ + +GVTFL V+ ACSHSG+V+ G+ F+ M + + + +HY MVDLLGRA
Sbjct: 584 EMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRA 643
Query: 604 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 663
GRLNEA + I MP++P V+ A+L A + H NV E AA +L E ++ G + LL+
Sbjct: 644 GRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLA 703
Query: 664 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 723
N+Y A W+ V ++R M G++K PGCS V+ K +FF G +HP S +IY L
Sbjct: 704 NIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLE 763
Query: 724 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 783
LI IK+ GYVP T+ L V+++ K LL HSEKLA+++G+L + G I V KNLR
Sbjct: 764 KLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLR 809
Query: 784 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
+C DCH+A YIS++ EI++RD RFHHFK G+CSC YW
Sbjct: 824 VCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of Carg22183-RA vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 542.0 bits (1395), Expect = 8.5e-154
Identity = 303/859 (35.27%), Postives = 471/859 (54.83%), Query Frame = 0
Query: 2 SFLKRCRTLIDAKLVHQQILVNGFTN---LVTHAIGGYIECNAFGQAVSLLERLV---PS 61
S LK C+T+ + K+ H+ + G N +T + E +++S + + S
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGT-RESLSFAKEVFENSES 96
Query: 62 HSTVFWWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTS 121
+ T F +N+LIR G ++A+ + +M G PD YTFPF L AC + + G
Sbjct: 97 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 156
Query: 122 VHAMVCAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQ 181
+H ++ G+ ++F+ NS+V Y CG LD AR+VFDE+ ER ++VSW S++ Y +
Sbjct: 157 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER---NVVSWTSMICGYAR 216
Query: 182 GGESKAALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGL-VD 241
+K A+ + F+M + + ++ P+++T+V V+ ACA + G +V+ F SG+ V+
Sbjct: 217 RDFAKDAVDLFFRMVR--DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 276
Query: 242 DVFVGNALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQ 301
D+ V +ALVDMY KC+ ++ A ++F++ ++ NA+
Sbjct: 277 DLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA-------------------- 336
Query: 302 EEDIELNVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALL 361
+ Y ++G EAL VF M G+ P+ ++++S +S C+ + +L
Sbjct: 337 ---------------SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 396
Query: 362 HGKQTHAYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVT 421
GK H Y ++N W + + N LIDMY KC A IFD + +K VVT
Sbjct: 397 WGKSCHGYVLRNGFE-SWDN------ICNALIDMYMKCHRQDTAFRIFDRM--SNKTVVT 456
Query: 422 WTVMIGGYAQHGEAN-------------------------------DAVELFSQMFKQET 481
W ++ GY ++GE + +A+E+F M QE
Sbjct: 457 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQE- 516
Query: 482 SLKPNAFTLSCALMACARLGALRLGKQIHAYALRHENESEVLHVANCLIDMYSKSGDIDA 541
+ + T+ AC LGAL L K I+ Y ++ + +V + L+DM+S+ GD ++
Sbjct: 517 GVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV-RLGTTLVDMFSRCGDPES 576
Query: 542 AQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFNQMRQVGLSVDGVTFLVVLYACSH 601
A +F+++ R+ +WT+ + + G E A+ +F+ M + GL DGV F+ L ACSH
Sbjct: 577 AMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSH 636
Query: 602 SGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRAGRLNEAMELIKSMPMEPTPVVWV 661
G+V QG F+ M+K GV+P HY CMVDLLGRAG L EA++LI+ MPMEP V+W
Sbjct: 637 GGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWN 696
Query: 662 ALLSASRTHANVELGEYAASKLIESGAENDGSYTLLSNLYANARRWKDVARIRRLMKHTG 721
+LL+A R NVE+ YAA K+ E GSY LLSN+YA+A RW D+A++R MK G
Sbjct: 697 SLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKG 756
Query: 722 IKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILSDLIQRIKDMGYVPQTSFALHDVD 781
++K PG S +Q + T F GD+SHP+ I +L ++ QR +G+VP S L DVD
Sbjct: 757 LRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVD 816
Query: 782 DEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLRICGDCHSALTYISMIIEHEIILR 823
++EK +L HSEKLA+AYG+++S G IR+ KNLR+C DCHS + S + EIILR
Sbjct: 817 EKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILR 842
BLAST of Carg22183-RA vs. TAIR 10
Match:
AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 541.2 bits (1393), Expect = 1.4e-153
Identity = 290/721 (40.22%), Postives = 431/721 (59.78%), Query Frame = 0
Query: 130 FICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESKAALRIAFQM 189
F N+V++ Y + G +D + FD++ +R D VSW +++ Y G+ A+R+ M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQR---DSVSWTTMIVGYKNIGQYHKAIRVMGDM 140
Query: 190 AKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGNALVDMYAKC 249
K + P TL NVL + A+T + G++VH F V+ GL +V V N+L++MYAKC
Sbjct: 141 VKE---GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 200
Query: 250 SKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIELNVVTWSAVI 309
A VF++M +D+ SWNA++ + Q+G D A++ F++M E DI VTW+++I
Sbjct: 201 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI----VTWNSMI 260
Query: 310 AGYSQRGHGCEALDVFRQM-QHCGLEPNVVTLVSLLSGCASVGALLHGKQTHAYAIK--- 369
+G++QRG+ ALD+F +M + L P+ TL S+LS CA++ L GKQ H++ +
Sbjct: 261 SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGF 320
Query: 370 -------NILNLDWSDPG--------------DDMMV--FNGLIDMYAKCKSSRVARNIF 429
N L +S G D+ + F L+D Y K A+NIF
Sbjct: 321 DISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIF 380
Query: 430 DSIIGKDKNVVTWTVMIGGYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARL 489
S+ KD++VV WT MI GY QHG +A+ LF M +PN++TL+ L + L
Sbjct: 381 VSL--KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV--GGGQRPNSYTLAAMLSVASSL 440
Query: 490 GALRLGKQIHAYALRHENESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKV-RNAVSWTS 549
+L GKQIH A++ E + V+N LI MY+K+G+I +A FD ++ R+ VSWTS
Sbjct: 441 ASLSHGKQIHGSAVK-SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTS 500
Query: 550 LMTGYGIHGRGEEALRVFNQMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCF 609
++ HG EEAL +F M GL D +T++ V AC+H+G+V+QG YF M
Sbjct: 501 MIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVD 560
Query: 610 GVAPGAEHYACMVDLLGRAGRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYA 669
+ P HYACMVDL GRAG L EA E I+ MP+EP V W +LLSA R H N++LG+ A
Sbjct: 561 KIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVA 620
Query: 670 ASKLIESGAENDGSYTLLSNLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTT 729
A +L+ EN G+Y+ L+NLY+ +W++ A+IR+ MK +KK G SW++ K
Sbjct: 621 AERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHV 680
Query: 730 FFVGDKSHPQSDQIYNILSDLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVA 789
F V D +HP+ ++IY + + IK MGYVP T+ LHD+++E K +L HSEKLA+A
Sbjct: 681 FGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIA 740
Query: 790 YGILTSAPGQPIRVNKNLRICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGY 823
+G++++ +R+ KNLR+C DCH+A+ +IS ++ EII+RD++RFHHFK G CSCR Y
Sbjct: 741 FGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDY 786
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7025541.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022960463.1 | 0.0e+00 | 99.39 | pentatricopeptide repeat-containing protein At5g16860 [Cucurbita moschata] | [more] |
KAG6593141.1 | 0.0e+00 | 99.39 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023514147.1 | 0.0e+00 | 99.15 | pentatricopeptide repeat-containing protein At5g16860 [Cucurbita pepo subsp. pep... | [more] |
XP_023004455.1 | 0.0e+00 | 97.57 | pentatricopeptide repeat-containing protein At5g16860 [Cucurbita maxima] >XP_023... | [more] |
Match Name | E-value | Identity | Description | |
Q9LFL5 | 6.5e-308 | 62.04 | Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX... | [more] |
Q9SN39 | 4.2e-158 | 36.76 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Q9LUJ2 | 1.2e-152 | 35.27 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Q3E6Q1 | 1.2e-152 | 35.77 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9SHZ8 | 2.0e-152 | 40.22 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1H912 | 0.0e+00 | 99.39 | pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1KUL7 | 0.0e+00 | 97.57 | pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1CPQ5 | 0.0e+00 | 89.17 | pentatricopeptide repeat-containing protein At5g16860 isoform X1 OS=Momordica ch... | [more] |
A0A1S3C0G3 | 0.0e+00 | 85.40 | pentatricopeptide repeat-containing protein At5g16860 OS=Cucumis melo OX=3656 GN... | [more] |
A0A6J1CP62 | 0.0e+00 | 89.69 | pentatricopeptide repeat-containing protein At5g16860 isoform X2 OS=Momordica ch... | [more] |
Match Name | E-value | Identity | Description | |
AT5G16860.1 | 4.6e-309 | 62.04 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G18750.1 | 3.0e-159 | 36.76 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G11290.1 | 8.5e-154 | 35.77 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G22690.2 | 8.5e-154 | 35.27 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |
AT2G22070.1 | 1.4e-153 | 40.22 | pentatricopeptide (PPR) repeat-containing protein | [more] |