Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTCTTCTACTCTCCATTTGTATTTCAACCTCTCTTTTTCATAGAATCCATGACACCAAGATCACCATTGAGACAACTTCTGCAAGAACAACAAGAACCTTTTGAGTTGGAGGATTACCTTTTTGAGAGAGAGTGGTACTCGAGGAAGAGCTCGAATCGGGGAAGTGGCTTCGGCTGCAGCGGTGGAAAATTAAACGGTGTTATGAAGTTTGGAAAGGGATTTGTTGAGATTAATAAGATGCTGAGGAATTCGTGTAAGAAGCTTCTCTCCATTCATAGGAAGCAGCAGCAAACTAAGGATGTGGGGGAAAATGGTTGGTTTTTTAGTGTCGGCTGCAAGAGAGTGGCAGAATCAGACAACTTTTTGTCTCCCTGCAGCTTCCAAACGACGCTCAGCTCAGATAATGAACAAACATCTCCTTATCCTGCTAATTCATCAAGTTCAGACACTTCCGGAGCTCTAGAACCCTGCAACTTACAAGTACTGAAGGTACTATCATTCTCTGTCAGTTTCAGTCCAAATCTATTTACAACTTACAAGTACTGAATGATCTGAACTTGTTTAGGACATGAAAACAGGGAAGAAGAGTCTAATTCGAGCGAGACCAAACAATGGCATTCCTCTACAGAAGCAAGTTTCAGAAGACTCAATTCTGTCAGCCACGCTCTTGCAGTTGCTTCTTTGCTCCGCAGCAACGGAGAAAACGAGTGGCACAGAGACTGCAGAGCTGCAAGAACTTGTTACGTCCAGCCCAGCAACTCAGCTCATGATACCCAAAAGGGTAATACATCAAACAAAGCAGCTTCTTTTTGACTGTGTGAGGGAAGTGGTGGCGACCCATTCTAAGAAGGGCAGTCGGAAAGCCCGGAGGCTCATCTGTGCGAAGGAAGCCAAAGGAAAAGAAGCAAACTTATCAAATTTAGTCTGCTCAGATTACTTGTTCTCAGCAGAAGAATGGAGGGATTTCAAGCCGCAGAAGCAGCTTATAGGGACAGAGATTGGAGAATTCATTGTCCAAGAGATCATTAATGAGGCTGTTACTGAACTAATTGATAATCTATGGCCATCAACCCTCTGGCTTCAACTATACCAAGATTCCAACGCATAGATTTGCCAGATTCAACGGGCCAAAAAAAAAGGCATTCTTGATCAGACTCTAGACGATAACTAGTCGTCGTGTAAGACAACATTTATTATCAACCAAAATAATGATTTATTGATTACGAAGCAGTTAAAATCTACGTACACCACGACACATTAGAACATTAGACACATACACATGTGTTAAAATTCATATCCTAGAAGTTTCACTCAACCACCTTGGGGCAGAAATTTACACTTAAGAGAGAGAGTAGATTTCAACCAATGGCCAATCTTAAATGAATTTGGATCTCTCACATCATT
mRNA sequence
ATGTTCTTCTTCTACTCTCCATTTGTATTTCAACCTCTCTTTTTCATAGAATCCATGACACCAAGATCACCATTGAGACAACTTCTGCAAGAACAACAAGAACCTTTTGAGTTGGAGGATTACCTTTTTGAGAGAGAGTGGTACTCGAGGAAGAGCTCGAATCGGGGAAGTGGCTTCGGCTGCAGCGGTGGAAAATTAAACGGTGTTATGAAGTTTGGAAAGGGATTTGTTGAGATTAATAAGATGCTGAGGAATTCGTGTAAGAAGCTTCTCTCCATTCATAGGAAGCAGCAGCAAACTAAGGATGTGGGGGAAAATGGTTGGTTTTTTAGTGTCGGCTGCAAGAGAGTGGCAGAATCAGACAACTTTTTGTCTCCCTGCAGCTTCCAAACGACGCTCAGCTCAGATAATGAACAAACATCTCCTTATCCTGCTAATTCATCAAGTTCAGACACTTCCGGAGCTCTAGAACCCTGCAACTTACAAGTACTGAAGGACATGAAAACAGGGAAGAAGAGTCTAATTCGAGCGAGACCAAACAATGGCATTCCTCTACAGAAGCAAGTTTCAGAAGACTCAATTCTGTCAGCCACGCTCTTGCAGTTGCTTCTTTGCTCCGCAGCAACGGAGAAAACGAGTGGCACAGAGACTGCAGAGCTGCAAGAACTTGTTACGTCCAGCCCAGCAACTCAGCTCATGATACCCAAAAGGGTAATACATCAAACAAAGCAGCTTCTTTTTGACTGTGTGAGGGAAGTGGTGGCGACCCATTCTAAGAAGGGCAGTCGGAAAGCCCGGAGGCTCATCTGTGCGAAGGAAGCCAAAGGAAAAGAAGCAAACTTATCAAATTTAGTCTGCTCAGATTACTTGTTCTCAGCAGAAGAATGGAGGGATTTCAAGCCGCAGAAGCAGCTTATAGGGACAGAGATTGGAGAATTCATTGTCCAAGAGATCATTAATGAGGCTGTTACTGAACTAATTGATAATCTATGGCCATCAACCCTCTGGCTTCAACTATACCAAGATTCCAACGCATAGATTTGCCAGATTCAACGGGCCAAAAAAAAAGGCATTCTTGATCAGACTCTAGACGATAACTAGTCGTCGTGTAAGACAACATTTATTATCAACCAAAATAATGATTTATTGATTACGAAGCAGTTAAAATCTACGTACACCACGACACATTAGAACATTAGACACATACACATGTGTTAAAATTCATATCCTAGAAGTTTCACTCAACCACCTTGGGGCAGAAATTTACACTTAAGAGAGAGAGTAGATTTCAACCAATGGCCAATCTTAAATGAATTTGGATCTCTCACATCATT
Coding sequence (CDS)
ATGTTCTTCTTCTACTCTCCATTTGTATTTCAACCTCTCTTTTTCATAGAATCCATGACACCAAGATCACCATTGAGACAACTTCTGCAAGAACAACAAGAACCTTTTGAGTTGGAGGATTACCTTTTTGAGAGAGAGTGGTACTCGAGGAAGAGCTCGAATCGGGGAAGTGGCTTCGGCTGCAGCGGTGGAAAATTAAACGGTGTTATGAAGTTTGGAAAGGGATTTGTTGAGATTAATAAGATGCTGAGGAATTCGTGTAAGAAGCTTCTCTCCATTCATAGGAAGCAGCAGCAAACTAAGGATGTGGGGGAAAATGGTTGGTTTTTTAGTGTCGGCTGCAAGAGAGTGGCAGAATCAGACAACTTTTTGTCTCCCTGCAGCTTCCAAACGACGCTCAGCTCAGATAATGAACAAACATCTCCTTATCCTGCTAATTCATCAAGTTCAGACACTTCCGGAGCTCTAGAACCCTGCAACTTACAAGTACTGAAGGACATGAAAACAGGGAAGAAGAGTCTAATTCGAGCGAGACCAAACAATGGCATTCCTCTACAGAAGCAAGTTTCAGAAGACTCAATTCTGTCAGCCACGCTCTTGCAGTTGCTTCTTTGCTCCGCAGCAACGGAGAAAACGAGTGGCACAGAGACTGCAGAGCTGCAAGAACTTGTTACGTCCAGCCCAGCAACTCAGCTCATGATACCCAAAAGGGTAATACATCAAACAAAGCAGCTTCTTTTTGACTGTGTGAGGGAAGTGGTGGCGACCCATTCTAAGAAGGGCAGTCGGAAAGCCCGGAGGCTCATCTGTGCGAAGGAAGCCAAAGGAAAAGAAGCAAACTTATCAAATTTAGTCTGCTCAGATTACTTGTTCTCAGCAGAAGAATGGAGGGATTTCAAGCCGCAGAAGCAGCTTATAGGGACAGAGATTGGAGAATTCATTGTCCAAGAGATCATTAATGAGGCTGTTACTGAACTAATTGATAATCTATGGCCATCAACCCTCTGGCTTCAACTATACCAAGATTCCAACGCATAG
Protein sequence
MFFFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFGCSGGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAESDNFLSPCSFQTTLSSDNEQTSPYPANSSSSDTSGALEPCNLQVLKDMKTGKKSLIRARPNNGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAELQELVTSSPATQLMIPKRVIHQTKQLLFDCVREVVATHSKKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSAEEWRDFKPQKQLIGTEIGEFIVQEIINEAVTELIDNLWPSTLWLQLYQDSNA
Homology
BLAST of Carg21763-RA vs. NCBI nr
Match:
KAG7024317.1 (hypothetical protein SDJN02_13131, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 676.4 bits (1744), Expect = 1.3e-190
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0
Query: 1 MFFFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFG 60
MFFFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFG
Sbjct: 1 MFFFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFG 60
Query: 61 CSGGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAES 120
CSGGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAES
Sbjct: 61 CSGGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAES 120
Query: 121 DNFLSPCSFQTTLSSDNEQTSPYPANSSSSDTSGALEPCNLQVLKDMKTGKKSLIRARPN 180
DNFLSPCSFQTTLSSDNEQTSPYPANSSSSDTSGALEPCNLQVLKDMKTGKKSLIRARPN
Sbjct: 121 DNFLSPCSFQTTLSSDNEQTSPYPANSSSSDTSGALEPCNLQVLKDMKTGKKSLIRARPN 180
Query: 181 NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAELQELVTSSPATQLMIPKRVIH 240
NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAELQELVTSSPATQLMIPKRVIH
Sbjct: 181 NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAELQELVTSSPATQLMIPKRVIH 240
Query: 241 QTKQLLFDCVREVVATHSKKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSAEEWRDFK 300
QTKQLLFDCVREVVATHSKKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSAEEWRDFK
Sbjct: 241 QTKQLLFDCVREVVATHSKKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSAEEWRDFK 300
Query: 301 PQKQLIGTEIGEFIVQEIINEAVTELIDNLWPSTLWLQLYQDSNA 346
PQKQLIGTEIGEFIVQEIINEAVTELIDNLWPSTLWLQLYQDSNA
Sbjct: 301 PQKQLIGTEIGEFIVQEIINEAVTELIDNLWPSTLWLQLYQDSNA 345
BLAST of Carg21763-RA vs. NCBI nr
Match:
XP_022936977.1 (uncharacterized protein LOC111443406 [Cucurbita moschata])
HSP 1 Score: 659.8 bits (1701), Expect = 1.3e-185
Identity = 338/344 (98.26%), Postives = 339/344 (98.55%), Query Frame = 0
Query: 1 MFFFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFG 60
MFFFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFG
Sbjct: 1 MFFFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFG 60
Query: 61 CSGGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAES 120
CSGGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAES
Sbjct: 61 CSGGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAES 120
Query: 121 DNFLSPCSFQTTLSSDNEQTSPYPANSSSSDTSGALEPCNLQVLKDMKTGKKSLIRARPN 180
DNFLSPCSFQ TLSSDNEQTSPYPANSSSSDTSGALEP NLQVLKDMKTGKKSLIRARPN
Sbjct: 121 DNFLSPCSFQKTLSSDNEQTSPYPANSSSSDTSGALEPSNLQVLKDMKTGKKSLIRARPN 180
Query: 181 NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAELQELVTSSPATQLMIPKRVIH 240
+GIPLQKQVSEDSILSATL QLLLCSAATEKTSGTETAELQELVTSSPA QLMIPKRVIH
Sbjct: 181 DGIPLQKQVSEDSILSATLWQLLLCSAATEKTSGTETAELQELVTSSPAAQLMIPKRVIH 240
Query: 241 QTKQLLFDCVREVVATHSKKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSAEEWRDFK 300
QTKQLLFDCVREVVATHSKKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSA EWRDFK
Sbjct: 241 QTKQLLFDCVREVVATHSKKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSAAEWRDFK 300
Query: 301 PQKQLIGTEIGEFIVQEIINEAVTELIDNLWPSTLWLQLYQDSN 345
PQKQLIGTEIGEFIVQEIINEAVTELIDNLWPSTLWLQLYQDSN
Sbjct: 301 PQKQLIGTEIGEFIVQEIINEAVTELIDNLWPSTLWLQLYQDSN 344
BLAST of Carg21763-RA vs. NCBI nr
Match:
KAG6591439.1 (hypothetical protein SDJN03_13785, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 636.0 bits (1639), Expect = 1.9e-178
Identity = 324/326 (99.39%), Postives = 324/326 (99.39%), Query Frame = 0
Query: 19 MTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFGCSGGKLNGVMKFGKGFVE 78
MTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFGCSGGKLNGVMKFGKGFVE
Sbjct: 1 MTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFGCSGGKLNGVMKFGKGFVE 60
Query: 79 INKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAESDNFLSPCSFQTTLSSDNE 138
INKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAESDNFLSPCSFQ TLSSDNE
Sbjct: 61 INKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAESDNFLSPCSFQKTLSSDNE 120
Query: 139 QTSPYPANSSSSDTSGALEPCNLQVLKDMKTGKKSLIRARPNNGIPLQKQVSEDSILSAT 198
QTSPYPANSSSSDTSGALEPCNLQVLKDMKTGKKSLI ARPNNGIPLQKQVSEDSILSAT
Sbjct: 121 QTSPYPANSSSSDTSGALEPCNLQVLKDMKTGKKSLIGARPNNGIPLQKQVSEDSILSAT 180
Query: 199 LLQLLLCSAATEKTSGTETAELQELVTSSPATQLMIPKRVIHQTKQLLFDCVREVVATHS 258
LLQLLLCSAATEKTSGTETAELQELVTSSPATQLMIPKRVIHQTKQLLFDCVREVVATHS
Sbjct: 181 LLQLLLCSAATEKTSGTETAELQELVTSSPATQLMIPKRVIHQTKQLLFDCVREVVATHS 240
Query: 259 KKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSAEEWRDFKPQKQLIGTEIGEFIVQEI 318
KKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSAEEWRDFKPQKQLIGTEIGEFIVQEI
Sbjct: 241 KKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSAEEWRDFKPQKQLIGTEIGEFIVQEI 300
Query: 319 INEAVTELIDNLWPSTLWLQLYQDSN 345
INEAVTELIDNLWPSTLWLQLYQDSN
Sbjct: 301 INEAVTELIDNLWPSTLWLQLYQDSN 326
BLAST of Carg21763-RA vs. NCBI nr
Match:
XP_023535386.1 (uncharacterized protein LOC111796841 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 634.8 bits (1636), Expect = 4.3e-178
Identity = 326/344 (94.77%), Postives = 333/344 (96.80%), Query Frame = 0
Query: 1 MFFFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFG 60
MFFF+SPFVFQPLFFIESMTP SPLRQLLQEQQEPFELEDYLFERE+YSRKSS+RGSGF
Sbjct: 1 MFFFHSPFVFQPLFFIESMTPTSPLRQLLQEQQEPFELEDYLFEREYYSRKSSSRGSGFA 60
Query: 61 CSGGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAES 120
CSGGKL+GVMKFGKG VEIN+MLRNSCKKLLSIHRKQQQTKDVGENGWFFSV CKRVAES
Sbjct: 61 CSGGKLDGVMKFGKGLVEINRMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVSCKRVAES 120
Query: 121 DNFLSPCSFQTTLSSDNEQTSPYPANSSSSDTSGALEPCNLQVLKDMKTGKKSLIRARPN 180
DNFLSPCSFQ TLSSDNEQTSPYPANSSSSDTSGAL+PCNLQVLKD+KTGKKSLI ARPN
Sbjct: 121 DNFLSPCSFQETLSSDNEQTSPYPANSSSSDTSGALQPCNLQVLKDIKTGKKSLIPARPN 180
Query: 181 NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAELQELVTSSPATQLMIPKRVIH 240
NGIPLQKQVSEDSILSATL QLLLCSAATEKTSGTETAELQELVTSSPA QLMIPKRVIH
Sbjct: 181 NGIPLQKQVSEDSILSATLWQLLLCSAATEKTSGTETAELQELVTSSPAAQLMIPKRVIH 240
Query: 241 QTKQLLFDCVREVVATHSKKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSAEEWRDFK 300
QTKQLLFDCVREVVATHSKKGSRKARRLI AKEAKGKEANLSNLVCSDYLFSA EWRDFK
Sbjct: 241 QTKQLLFDCVREVVATHSKKGSRKARRLIYAKEAKGKEANLSNLVCSDYLFSAAEWRDFK 300
Query: 301 PQKQLIGTEIGEFIVQEIINEAVTELIDNLWPSTLWLQLYQDSN 345
PQKQLIGTEIGEFIVQEIINEAVTEL DNLWPSTLWLQLYQDSN
Sbjct: 301 PQKQLIGTEIGEFIVQEIINEAVTELFDNLWPSTLWLQLYQDSN 344
BLAST of Carg21763-RA vs. NCBI nr
Match:
XP_022977058.1 (uncharacterized protein LOC111477240 [Cucurbita maxima])
HSP 1 Score: 615.5 bits (1586), Expect = 2.7e-172
Identity = 317/337 (94.07%), Postives = 323/337 (95.85%), Query Frame = 0
Query: 1 MFFFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFG 60
MF F+SPFVFQP FFIESMTPRSPLRQLLQEQQEPFELEDYLFERE+YSRKSS+RGSGF
Sbjct: 1 MFLFHSPFVFQPHFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREYYSRKSSSRGSGFA 60
Query: 61 CSGGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAES 120
CSGGKL+GVMKFGKG VEINKMLRNSCKKLLSIHRKQQQTKD+GENGWFFSV CKRVAES
Sbjct: 61 CSGGKLDGVMKFGKGLVEINKMLRNSCKKLLSIHRKQQQTKDLGENGWFFSVSCKRVAES 120
Query: 121 DNFLSPCSFQTTLSSDNEQTSPYPANSSSSDTSGALEPCNLQVLKDMKTGKKSLIRARPN 180
DNFLSPCSFQ TLSSDNEQ SPYPANSSSSDTSGALEPCNLQVLKDMKTGK SLIRARPN
Sbjct: 121 DNFLSPCSFQKTLSSDNEQPSPYPANSSSSDTSGALEPCNLQVLKDMKTGKTSLIRARPN 180
Query: 181 NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAELQELVTSSPATQLMIPKRVIH 240
NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAELQELVTSSPA QLMIPKRVIH
Sbjct: 181 NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAELQELVTSSPAAQLMIPKRVIH 240
Query: 241 QTKQLLFDCVREVVATHSKKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSAEEWRDFK 300
QTKQLLFDCV EVVATHSKKGSRKARRLICA+EA KEANLSNLVCSDYLFSA EWRDFK
Sbjct: 241 QTKQLLFDCVSEVVATHSKKGSRKARRLICAREANRKEANLSNLVCSDYLFSAAEWRDFK 300
Query: 301 PQKQLIGTEIGEFIVQEIINEAVTELIDNLWPSTLWL 338
PQKQLIGTEIGEFIVQEII EAVTELIDNLWPSTLWL
Sbjct: 301 PQKQLIGTEIGEFIVQEIIKEAVTELIDNLWPSTLWL 337
BLAST of Carg21763-RA vs. ExPASy TrEMBL
Match:
A0A6J1F9U7 (uncharacterized protein LOC111443406 OS=Cucurbita moschata OX=3662 GN=LOC111443406 PE=4 SV=1)
HSP 1 Score: 659.8 bits (1701), Expect = 6.1e-186
Identity = 338/344 (98.26%), Postives = 339/344 (98.55%), Query Frame = 0
Query: 1 MFFFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFG 60
MFFFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFG
Sbjct: 1 MFFFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFG 60
Query: 61 CSGGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAES 120
CSGGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAES
Sbjct: 61 CSGGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAES 120
Query: 121 DNFLSPCSFQTTLSSDNEQTSPYPANSSSSDTSGALEPCNLQVLKDMKTGKKSLIRARPN 180
DNFLSPCSFQ TLSSDNEQTSPYPANSSSSDTSGALEP NLQVLKDMKTGKKSLIRARPN
Sbjct: 121 DNFLSPCSFQKTLSSDNEQTSPYPANSSSSDTSGALEPSNLQVLKDMKTGKKSLIRARPN 180
Query: 181 NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAELQELVTSSPATQLMIPKRVIH 240
+GIPLQKQVSEDSILSATL QLLLCSAATEKTSGTETAELQELVTSSPA QLMIPKRVIH
Sbjct: 181 DGIPLQKQVSEDSILSATLWQLLLCSAATEKTSGTETAELQELVTSSPAAQLMIPKRVIH 240
Query: 241 QTKQLLFDCVREVVATHSKKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSAEEWRDFK 300
QTKQLLFDCVREVVATHSKKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSA EWRDFK
Sbjct: 241 QTKQLLFDCVREVVATHSKKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSAAEWRDFK 300
Query: 301 PQKQLIGTEIGEFIVQEIINEAVTELIDNLWPSTLWLQLYQDSN 345
PQKQLIGTEIGEFIVQEIINEAVTELIDNLWPSTLWLQLYQDSN
Sbjct: 301 PQKQLIGTEIGEFIVQEIINEAVTELIDNLWPSTLWLQLYQDSN 344
BLAST of Carg21763-RA vs. ExPASy TrEMBL
Match:
A0A6J1INX4 (uncharacterized protein LOC111477240 OS=Cucurbita maxima OX=3661 GN=LOC111477240 PE=4 SV=1)
HSP 1 Score: 615.5 bits (1586), Expect = 1.3e-172
Identity = 317/337 (94.07%), Postives = 323/337 (95.85%), Query Frame = 0
Query: 1 MFFFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFG 60
MF F+SPFVFQP FFIESMTPRSPLRQLLQEQQEPFELEDYLFERE+YSRKSS+RGSGF
Sbjct: 1 MFLFHSPFVFQPHFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREYYSRKSSSRGSGFA 60
Query: 61 CSGGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAES 120
CSGGKL+GVMKFGKG VEINKMLRNSCKKLLSIHRKQQQTKD+GENGWFFSV CKRVAES
Sbjct: 61 CSGGKLDGVMKFGKGLVEINKMLRNSCKKLLSIHRKQQQTKDLGENGWFFSVSCKRVAES 120
Query: 121 DNFLSPCSFQTTLSSDNEQTSPYPANSSSSDTSGALEPCNLQVLKDMKTGKKSLIRARPN 180
DNFLSPCSFQ TLSSDNEQ SPYPANSSSSDTSGALEPCNLQVLKDMKTGK SLIRARPN
Sbjct: 121 DNFLSPCSFQKTLSSDNEQPSPYPANSSSSDTSGALEPCNLQVLKDMKTGKTSLIRARPN 180
Query: 181 NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAELQELVTSSPATQLMIPKRVIH 240
NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAELQELVTSSPA QLMIPKRVIH
Sbjct: 181 NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAELQELVTSSPAAQLMIPKRVIH 240
Query: 241 QTKQLLFDCVREVVATHSKKGSRKARRLICAKEAKGKEANLSNLVCSDYLFSAEEWRDFK 300
QTKQLLFDCV EVVATHSKKGSRKARRLICA+EA KEANLSNLVCSDYLFSA EWRDFK
Sbjct: 241 QTKQLLFDCVSEVVATHSKKGSRKARRLICAREANRKEANLSNLVCSDYLFSAAEWRDFK 300
Query: 301 PQKQLIGTEIGEFIVQEIINEAVTELIDNLWPSTLWL 338
PQKQLIGTEIGEFIVQEII EAVTELIDNLWPSTLWL
Sbjct: 301 PQKQLIGTEIGEFIVQEIIKEAVTELIDNLWPSTLWL 337
BLAST of Carg21763-RA vs. ExPASy TrEMBL
Match:
A0A1S3BV72 (uncharacterized protein LOC103493622 OS=Cucumis melo OX=3656 GN=LOC103493622 PE=4 SV=1)
HSP 1 Score: 430.6 bits (1106), Expect = 6.0e-117
Identity = 246/355 (69.30%), Postives = 280/355 (78.87%), Query Frame = 0
Query: 3 FFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFGCS 62
FFYSP FQ LF I SMTPRSPLR+LLQEQQEPFELEDYL ER++YSRKS +R S F CS
Sbjct: 2 FFYSPLTFQTLFLIASMTPRSPLRELLQEQQEPFELEDYLSERDYYSRKSLSRRSDFACS 61
Query: 63 GGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAESDN 122
GKL+ +MKFGKGF+EIN +L+NSCKKL+SI+RK QQ K +G+NGW FSVGCKRVAESDN
Sbjct: 62 WGKLDSIMKFGKGFIEINTLLKNSCKKLVSINRK-QQNKGLGKNGWIFSVGCKRVAESDN 121
Query: 123 FLSPCSFQTTLSS----DNEQTSPYP----ANSSSSDTSGALEPCNLQVLK--------- 182
FLSPCS + T+ S DNE+T ANSS+S+T A EPCN QV+K
Sbjct: 122 FLSPCSSRKTVHSVSGKDNEETFSSTRRRHANSSTSNTFQAPEPCNFQVVKAAAGKKLLS 181
Query: 183 -DMKTGKKSLIRARPN-----NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAE 242
M+ K+S IRARPN NGIPLQK+V EDSILSATL +LLL SAATEKTSG ETAE
Sbjct: 182 RSMEPRKRSPIRARPNDNRLRNGIPLQKKVPEDSILSATLWELLLYSAATEKTSGIETAE 241
Query: 243 LQELVTSSPATQLMIPKRVIHQTKQLLFDCVREVVATHSKKGSR----KARRLICAKEAK 302
LQELV+S+PA+QL+I KRVIHQTKQLLF+CVREVV HSKKGSR +A R+I KE
Sbjct: 242 LQELVSSNPASQLLISKRVIHQTKQLLFNCVREVVEAHSKKGSRMGSEEAGRIIYEKETI 301
Query: 303 GKEANLSNLVCSDYLFSAEEWRDFKPQKQLIGTEIGEFIVQEIINEAVTELIDNL 331
KEANLS+L+ SDYLFSA EWRDFKPQKQLIGTEIGEFI++EIINE VTELIDNL
Sbjct: 302 VKEANLSDLLFSDYLFSAAEWRDFKPQKQLIGTEIGEFILREIINEVVTELIDNL 355
BLAST of Carg21763-RA vs. ExPASy TrEMBL
Match:
A0A0A0L558 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644680 PE=4 SV=1)
HSP 1 Score: 427.6 bits (1098), Expect = 5.1e-116
Identity = 244/355 (68.73%), Postives = 279/355 (78.59%), Query Frame = 0
Query: 3 FFYSPFVFQPLFFIESMTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFGCS 62
FFYSP FQ LF I SMTPRSPLRQLLQEQQEPF+LE+YL ER++YSRKS +RGSG CS
Sbjct: 2 FFYSPLTFQTLFLIASMTPRSPLRQLLQEQQEPFKLEEYLSERDYYSRKSLSRGSGLACS 61
Query: 63 GGKLNGVMKFGKGFVEINKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAESDN 122
GGKL+ +MKFGKGF+EIN +L+NSCKKL+ I+RK QQ KD+G+NGW FSVGCKRVAESDN
Sbjct: 62 GGKLDSIMKFGKGFMEINTLLKNSCKKLVFINRK-QQNKDLGKNGWIFSVGCKRVAESDN 121
Query: 123 FLSPCSFQTTLSS----DNEQTSPYP----ANSSSSDTSGALEPCNLQVLK--------- 182
FLSPCS + T+ S D+E+T ANSS+S+T A EPCN QV+K
Sbjct: 122 FLSPCSSRKTVHSVSGKDDEETLSSTRGRHANSSTSNTFEAPEPCNFQVVKAAAGKKLVS 181
Query: 183 -DMKTGKKSLIRARPN-----NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAE 242
M+ K+SLIRAR N NGIPLQK+V EDSILSATL +LLL SAATEKTSG ETAE
Sbjct: 182 RSMEPRKRSLIRARSNDNRLRNGIPLQKKVPEDSILSATLWELLLYSAATEKTSGIETAE 241
Query: 243 LQELVTSSPATQLMIPKRVIHQTKQLLFDCVREVVATHSKKGSR----KARRLICAKEAK 302
L ELV S+PA+QL+I KRVIHQTKQLLF+CVREVV SK+GSR +A R+IC KEA
Sbjct: 242 LPELVASNPASQLLISKRVIHQTKQLLFNCVREVVEAQSKQGSRIGSEEAGRIICEKEAI 301
Query: 303 GKEANLSNLVCSDYLFSAEEWRDFKPQKQLIGTEIGEFIVQEIINEAVTELIDNL 331
KEANLSNL+ SDYL SA EWRDFKPQKQLIGTEIGEFI++EIINE V ELIDNL
Sbjct: 302 VKEANLSNLLFSDYLSSAAEWRDFKPQKQLIGTEIGEFILKEIINEVVKELIDNL 355
BLAST of Carg21763-RA vs. ExPASy TrEMBL
Match:
A0A5D3D984 (DUF4378 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002480 PE=4 SV=1)
HSP 1 Score: 412.1 bits (1058), Expect = 2.2e-111
Identity = 235/339 (69.32%), Postives = 269/339 (79.35%), Query Frame = 0
Query: 19 MTPRSPLRQLLQEQQEPFELEDYLFEREWYSRKSSNRGSGFGCSGGKLNGVMKFGKGFVE 78
MTPRSPLR+LLQEQQEPFELEDYL ER++YSRKS +R S F CS GKL+ +MKFGKGF+E
Sbjct: 1 MTPRSPLRELLQEQQEPFELEDYLSERDYYSRKSLSRRSDFACSWGKLDSIMKFGKGFIE 60
Query: 79 INKMLRNSCKKLLSIHRKQQQTKDVGENGWFFSVGCKRVAESDNFLSPCSFQTTLSS--- 138
IN +L+NSCKKL+SI+RK QQ K +G+NGW FSVGCKRVAESDNFLSPCS + T+ S
Sbjct: 61 INTLLKNSCKKLVSINRK-QQNKGLGKNGWIFSVGCKRVAESDNFLSPCSSRKTVHSVSG 120
Query: 139 -DNEQTSPYP----ANSSSSDTSGALEPCNLQVLK----------DMKTGKKSLIRARPN 198
DNE+T ANSS+S+T A EPCN QV+K M+ K+S IRARPN
Sbjct: 121 KDNEETFSSTRRRHANSSTSNTFQAPEPCNFQVVKAAAGKKLLSRSMEPRKRSPIRARPN 180
Query: 199 -----NGIPLQKQVSEDSILSATLLQLLLCSAATEKTSGTETAELQELVTSSPATQLMIP 258
NGIPLQK+V EDSILSATL +LLL SAATEKTSG ETAELQELV+S+PA+QL+I
Sbjct: 181 DNRLRNGIPLQKKVPEDSILSATLWELLLYSAATEKTSGIETAELQELVSSNPASQLLIS 240
Query: 259 KRVIHQTKQLLFDCVREVVATHSKKGSR----KARRLICAKEAKGKEANLSNLVCSDYLF 318
KRVIHQTKQLLF+CVREVV HSKKGSR +A R+I KE KEANLS+L+ SDYLF
Sbjct: 241 KRVIHQTKQLLFNCVREVVEAHSKKGSRMGSEEAGRIIYEKETIVKEANLSDLLFSDYLF 300
Query: 319 SAEEWRDFKPQKQLIGTEIGEFIVQEIINEAVTELIDNL 331
SA EWRDFKPQKQLIGTEIGEFI++EIINE VTELIDNL
Sbjct: 301 SAAEWRDFKPQKQLIGTEIGEFILREIINEVVTELIDNL 338
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7024317.1 | 1.3e-190 | 100.00 | hypothetical protein SDJN02_13131, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022936977.1 | 1.3e-185 | 98.26 | uncharacterized protein LOC111443406 [Cucurbita moschata] | [more] |
KAG6591439.1 | 1.9e-178 | 99.39 | hypothetical protein SDJN03_13785, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023535386.1 | 4.3e-178 | 94.77 | uncharacterized protein LOC111796841 [Cucurbita pepo subsp. pepo] | [more] |
XP_022977058.1 | 2.7e-172 | 94.07 | uncharacterized protein LOC111477240 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1F9U7 | 6.1e-186 | 98.26 | uncharacterized protein LOC111443406 OS=Cucurbita moschata OX=3662 GN=LOC1114434... | [more] |
A0A6J1INX4 | 1.3e-172 | 94.07 | uncharacterized protein LOC111477240 OS=Cucurbita maxima OX=3661 GN=LOC111477240... | [more] |
A0A1S3BV72 | 6.0e-117 | 69.30 | uncharacterized protein LOC103493622 OS=Cucumis melo OX=3656 GN=LOC103493622 PE=... | [more] |
A0A0A0L558 | 5.1e-116 | 68.73 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644680 PE=4 SV=1 | [more] |
A0A5D3D984 | 2.2e-111 | 69.32 | DUF4378 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
Carg21763 | Carg21763 | gene |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Carg21763-RA:1 | Carg21763-RA:1 | exon |
Carg21763-RA:2 | Carg21763-RA:2 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Carg21763-RA:cds | Carg21763-RA:cds | CDS |
Carg21763-RA:cds | Carg21763-RA:cds_2 | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Carg21763-RA:three_prime_utr | Carg21763-RA:three_prime_utr | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Carg21763-RA | Carg21763-RA-protein | polypeptide |