Carg21525-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg21525-RA
TypemRNA
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnudix hydrolase 11-like
LocationCarg_Chr13: 7155398 .. 7157339 (-)
Sequence length1579
RNA-Seq ExpressionCarg21525-RA
SyntenyCarg21525-RA
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGAAGACGTTCTCCAGAGACTGCAGGCTTTGGCAGAACATTTCCGCACAGGTAATTCTTCTCAGTCTCCGACGTTACCGCCACCAGATCCGGCAGCAGCTCAACTCACCAACCGTGCTGCTGTTCTCATCTGCCTCTTCCTAAGCGACATTGGCGAACTCCGCGTGATTCTCACCAAGCGAGCCTCTACGCTTTCTTCCCACTCCGGTAAGTCTCGCTCCGAAACCCTAATTCATCTTTGTGAAATTGAAATTGCTTTAAAGGACAATAGAATAGGAGAAGGATTAGATGATTGATATTCGGGATGCAGGGGAAGTCGCGCTCCCCGGCGGAAAAAGGGATCTGAGTGATGCCGATGATGTTGCGACGGCATTGAGAGAGGCAGAGGAGGAAATTGGCTTAGCCCCTTCTCTTGTTAACGTCGTCGCTGTTCTCGAACCATATGTTAATAAGGTTCATATATACCTTTTTGTTTTTACTTTGGTGCTTAGATTATGTTTGTCCATGAACCATATTCACTGCACAATCCATACTTCGTTTTTGTTTATACTTTTAACCCTTTTTCTTTCATAATTTTTCTTATTTCGCCTGATCATAACATCAAAACTGTACCTCTCTCCAGTTTCCATTTAACATTGTACATTTTGATTAGATAACATTTGGTTGAGGGAAGACCATTTGATTGAAGGTGTAGGCGTTCTTTTGGTTTAACCACAAATTACTTTCCCCAGGTCTATTGATTCTGCAAGAGTATAATTTTTATGTCACATTTTGCATTTTTTTGCTGCTAATTCTGACCATTTCTGCCCGTCGTTATCTCTTGTTACTTGTGCATTTTTGGATGGTTGCGAGTGAGTCCCACGTTGACTAATTTAGGGAATGATCATGGGTTTATCAATAAGGAATACATCTCCATTGGTACGAAACATTTTGGAGAAATTCAAAGCGAAGCCACGAGAACTTATGCTCAAAGTGGACAATATTATACCATTGTGGACAATATTATATCATTGTGAAGGTTCGTAATTCGTAACCATGTATGTTCTGTCTGAGCAGAAGGGTATGACTGTAGTTCCTGTACTTGGGCTGTTATCTAGGAAGGAAGCATTCAAACCCACTCCAAGTGCTGCTGAAGTAGATGCAATATTTGATGCTCCCTTGGAAATGTTCCTCAAGGTTTATCATACTTGTTTGATCTTAACTTTGATTAGACTAATTGGTTTGGTTGGTGACATATTGAAGTTGGCCCAGGATGAGAAGAGAAGAGCAGTGGAGAAGGAATGGATGGGATATAATTATCTGTTACACTTTTTTGACTACGAATATGAGAATGAAAATTATGTGATCTGGGCTCTCACTGCTGGTATCTTGATCAAGGCAGCTTCCTTGGTGTTCCAGCGCCCACCTGCCTTTCTGGAGCGGCCACCCAGATTCTGGTTTGCTTCTGCTAATGGCAGCAGCCAAACTTGAGATTCTCAGAAGTGAAGGTATTTATTGTACAATCTCATTGTGTATTGTTGCAACATTAGATGTTTGTCATTCTGTAGGGAGGAGTAAATATTATGCTAAGAGTGTCTAACTATGAATGCATCTTCTATTCCTCCAATTACAACTGAGCTCTTGGTAACTTTTGGAGTTACAATGTATTTCAGTTATGTTGACACTCTGAGCTGTTGGGGATTGAATTGGGCCACCCACACACCGATGACTTTTGGATGTAGTTTGAAGAAAATCATATTTCCTTAGTATCAACTAGACACAAATTAGAATTAGAAGTACATTTGTAGTTTCTCTGATATATATCCTTAGATGATAAATAGTCACCCACTGGTCTTTCCTATACCCCTGCCAATCTCAACATCCTTGTAAAAGCTATCTATCTGTAATAGAGGCCATGTTCATCGTTAGCCGATATTAAGAGGTTTCTACATCCTTATAAAC

mRNA sequence

GGAGAAGACGTTCTCCAGAGACTGCAGGCTTTGGCAGAACATTTCCGCACAGGTAATTCTTCTCAGTCTCCGACGTTACCGCCACCAGATCCGGCAGCAGCTCAACTCACCAACCGTGCTGCTGTTCTCATCTGCCTCTTCCTAAGCGACATTGGCGAACTCCGCGTGATTCTCACCAAGCGAGCCTCTACGCTTTCTTCCCACTCCGGGGAAGTCGCGCTCCCCGGCGGAAAAAGGGATCTGAGTGATGCCGATGATGTTGCGACGGCATTGAGAGAGGCAGAGGAGGAAATTGGCTTAGCCCCTTCTCTTGTTAACGTCGTCGCTGTTCTCGAACCATATGTTAATAAGGTTCATATATACCTTTTTGTTTTTACTTTGGTGCTTAGATTATGTTTGTCCATGAACCATATTCACTGCACAATCCATACTTCGTTTTTGTTTATACTTTTAACCCTTTTTCTTTCATAATTTTTCTTATTTCGCCTGATCATAACATCAAAACTGTACCTCTCTCCAGTTTCCATTTAACATTGTACATTTTGATTAGATAACATTTGGTTGAGGGAAGACCATTTGATTGAAGGTGTAGGCGTTCTTTTGGTTTAACCACAAATTACTTTCCCCAGGTCTATTGATTCTGCAAGAGTATAATTTTTATGTCACATTTTGCATTTTTTTGCTGCTAATTCTGACCATTTCTGCCCGTCGTTATCTCTTGTTACTTGTGCATTTTTGGATGGTTGCGAGTGAGTCCCACGTTGACTAATTTAGGGAATGATCATGGGTTTATCAATAAGGAATACATCTCCATTGGTACGAAACATTTTGGAGAAATTCAAAGCGAAGCCACGAGAACTTATGCTCAAAGTGGACAATATTATACCATTGTGAAGGTTCGTAATTCGTAACCATGTATGTTCTGTCTGAGCAGAAGGGTATGACTGTAGTTCCTGTACTTGGGCTGTTATCTAGGAAGGAAGCATTCAAACCCACTCCAAGTGCTGCTGAAGTAGATGCAATATTTGATGCTCCCTTGGAAATGTTCCTCAAGGATGAGAAGAGAAGAGCAGTGGAGAAGGAATGGATGGGATATAATTATCTGTTACACTTTTTTGACTACGAATATGAGAATGAAAATTATGTGATCTGGGCTCTCACTGCTGGTATCTTGATCAAGGCAGCTTCCTTGGTGTTCCAGCGCCCACCTGCCTTTCTGGAGCGGCCACCCAGATTCTGGTTTGCTTCTGCTAATGGCAGCAGCCAAACTTGAGATTCTCAGAAGTGAAGTTATGTTGACACTCTGAGCTGTTGGGGATTGAATTGGGCCACCCACACACCGATGACTTTTGGATGTAGTTTGAAGAAAATCATATTTCCTTAGTATCAACTAGACACAAATTAGAATTAGAAGTACATTTGTAGTTTCTCTGATATATATCCTTAGATGATAAATAGTCACCCACTGGTCTTTCCTATACCCCTGCCAATCTCAACATCCTTGTAAAAGCTATCTATCTGTAATAGAGGCCATGTTCATCGTTAGCCGATATTAAGAGGTTTCTACATCCTTATAAAC

Coding sequence (CDS)

GGAGAAGACGTTCTCCAGAGACTGCAGGCTTTGGCAGAACATTTCCGCACAGGTAATTCTTCTCAGTCTCCGACGTTACCGCCACCAGATCCGGCAGCAGCTCAACTCACCAACCGTGCTGCTGTTCTCATCTGCCTCTTCCTAAGCGACATTGGCGAACTCCGCGTGATTCTCACCAAGCGAGCCTCTACGCTTTCTTCCCACTCCGGGGAAGTCGCGCTCCCCGGCGGAAAAAGGGATCTGAGTGATGCCGATGATGTTGCGACGGCATTGAGAGAGGCAGAGGAGGAAATTGGCTTAGCCCCTTCTCTTGTTAACGTCGTCGCTGTTCTCGAACCATATGTTAATAAGGTTCATATATACCTTTTTGTTTTTACTTTGGTGCTTAGATTATGTTTGTCCATGAACCATATTCACTGCACAATCCATACTTCGTTTTTGTTTATACTTTTAACCCTTTTTCTTTCATAA

Protein sequence

GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTKRASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNKVHIYLFVFTLVLRLCLSMNHIHCTIHTSFLFILLTLFLS
Homology
[Close]
BLAST of Carg21525-RA vs. NCBI nr
Match: KAG7019593.1 (Nudix hydrolase 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292.7 bits (748), Expect = 1.8e-75
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 1   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTK 60
           GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTK
Sbjct: 1   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTK 60

Query: 61  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNKVHI 120
           RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNKVHI
Sbjct: 61  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNKVHI 120

Query: 121 YLFVFTLVLRLCLSMNHIHCTIHTSFLFILLTLFLS 157
           YLFVFTLVLRLCLSMNHIHCTIHTSFLFILLTLFLS
Sbjct: 121 YLFVFTLVLRLCLSMNHIHCTIHTSFLFILLTLFLS 156

[Close]
BLAST of Carg21525-RA vs. NCBI nr
Match: KAG6583969.1 (Nudix hydrolase 15, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223.8 bits (569), Expect = 1.0e-54
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTK 60
           GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTK
Sbjct: 9   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTK 68

Query: 61  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 118
           RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK
Sbjct: 69  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 125

[Close]
BLAST of Carg21525-RA vs. NCBI nr
Match: XP_023001749.1 (nudix hydrolase 11-like [Cucurbita maxima])

HSP 1 Score: 222.2 bits (565), Expect = 3.0e-54
Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0 

Query: 1   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTK 60
           GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAA QLTNRAAVLICLFLSDIGELRVILTK
Sbjct: 9   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAATQLTNRAAVLICLFLSDIGELRVILTK 68

Query: 61  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 118
           RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK
Sbjct: 69  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 125

[Close]
BLAST of Carg21525-RA vs. NCBI nr
Match: XP_022927216.1 (nudix hydrolase 11-like [Cucurbita moschata] >XP_022927217.1 nudix hydrolase 11-like [Cucurbita moschata])

HSP 1 Score: 222.2 bits (565), Expect = 3.0e-54
Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0 

Query: 1   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTK 60
           GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAA QLTNRAAVLICLFLSDIGELRVILTK
Sbjct: 9   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAATQLTNRAAVLICLFLSDIGELRVILTK 68

Query: 61  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 118
           RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK
Sbjct: 69  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 125

[Close]
BLAST of Carg21525-RA vs. NCBI nr
Match: KAG7019588.1 (Nudix hydrolase 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 222.2 bits (565), Expect = 3.0e-54
Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0 

Query: 1   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTK 60
           GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAA QLTNRAAVLICLFLSDIGELRVILTK
Sbjct: 7   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAATQLTNRAAVLICLFLSDIGELRVILTK 66

Query: 61  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 118
           RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK
Sbjct: 67  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 123

[Close]
BLAST of Carg21525-RA vs. ExPASy Swiss-Prot
Match: Q8LET2 (Nudix hydrolase 11 OS=Arabidopsis thaliana OX=3702 GN=NUDT11 PE=1 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 4.9e-23
Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 0 

Query: 40  AAVLICLF---LSDIGELRVILTKRASTLSSHSGEVALPGGKRDLSDADDVATALREAEE 99
           +AVL+CL+     D  ELRVILTKR++TLSSH GEVALPGGKRD  D DD+ATALREA E
Sbjct: 34  SAVLVCLYQEQREDKNELRVILTKRSTTLSSHPGEVALPGGKRDQEDKDDIATALREARE 93

Query: 100 EIGLAPSLVNVVAVLEPYVNK 118
           EIGL PSLV +++VLEP+VNK
Sbjct: 94  EIGLDPSLVTIISVLEPFVNK 114

[Close]
BLAST of Carg21525-RA vs. ExPASy Swiss-Prot
Match: O22951 (Nudix hydrolase 22, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT22 PE=2 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 3.2e-22
Identity = 56/79 (70.89%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 39  RAAVLICLFLSDIGELRVILTKRASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEI 98
           +AAVLICLF  D G+LRVILTKR+STLS+HSGEV+LPGGK +  D DD  TA REAEEEI
Sbjct: 75  KAAVLICLFEGDDGDLRVILTKRSSTLSTHSGEVSLPGGKAEEHDKDDGITATREAEEEI 134

Query: 99  GLAPSLVNVVAVLEPYVNK 118
           GL PSLV+VVA LEP++++
Sbjct: 135 GLDPSLVDVVAFLEPFLSQ 153

[Close]
BLAST of Carg21525-RA vs. ExPASy Swiss-Prot
Match: Q8GYB1 (Nudix hydrolase 15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT15 PE=1 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 7.1e-22
Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 0 

Query: 39  RAAVLICLFLSDIGELRVILTKRASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEI 98
           RAAVLICLF  D G+LRVILTKR+S LS+HSGEV+LPGGK +  D DD  TA REAEEEI
Sbjct: 101 RAAVLICLFEGDDGDLRVILTKRSSKLSTHSGEVSLPGGKAEEDDKDDGMTATREAEEEI 160

Query: 99  GLAPSLVNVVAVLEPYVNK 118
           GL PSLV+VV  LEP+++K
Sbjct: 161 GLDPSLVDVVTSLEPFLSK 179

[Close]
BLAST of Carg21525-RA vs. ExPASy Swiss-Prot
Match: Q99P30 (Peroxisomal coenzyme A diphosphatase NUDT7 OS=Mus musculus OX=10090 GN=Nudt7 PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-11
Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 0 

Query: 37  TNRAAVLICLFLSDIGELRVILTKRASTLSSHSGEVALPGGKRDLSDADDVATALREAEE 96
           +N+ +VL+ L L+  G+L ++ T R+  L    GEV  PGGKRD  D DD ATALREA+E
Sbjct: 37  SNKFSVLVPL-LARGGKLYLMFTVRSDKLKREPGEVCFPGGKRDPVDTDDTATALREAQE 96

Query: 97  EIGLAPSLVNVVAVLEPYV 116
           E+GL P  V VV+ L PYV
Sbjct: 97  EVGLHPHQVEVVSHLVPYV 114

[Close]
BLAST of Carg21525-RA vs. ExPASy Swiss-Prot
Match: P0C024 (Peroxisomal coenzyme A diphosphatase NUDT7 OS=Homo sapiens OX=9606 GN=NUDT7 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10
Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0 

Query: 38  NRAAVLICLFLSDIGELRVILTKRASTLSSHSGEVALPGGKRDLSDADDVATALREAEEE 97
           N+ +VL+ L   + G+L ++ T R+  L    GEV  PGGKRD +D DD ATALREA+EE
Sbjct: 38  NKYSVLLPLVAKE-GKLHLLFTVRSEKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEE 97

Query: 98  IGLAPSLVNVVAVLEP 114
           +GL P  V VV  L P
Sbjct: 98  VGLRPHQVEVVCCLVP 112

[Close]
BLAST of Carg21525-RA vs. ExPASy TrEMBL
Match: A0A6J1EH29 (nudix hydrolase 11-like OS=Cucurbita moschata OX=3662 GN=LOC111434132 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.5e-54
Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0 

Query: 1   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTK 60
           GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAA QLTNRAAVLICLFLSDIGELRVILTK
Sbjct: 9   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAATQLTNRAAVLICLFLSDIGELRVILTK 68

Query: 61  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 118
           RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK
Sbjct: 69  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 125

[Close]
BLAST of Carg21525-RA vs. ExPASy TrEMBL
Match: A0A6J1KNJ7 (nudix hydrolase 11-like OS=Cucurbita maxima OX=3661 GN=LOC111495791 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.5e-54
Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0 

Query: 1   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTK 60
           GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAA QLTNRAAVLICLFLSDIGELRVILTK
Sbjct: 9   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAATQLTNRAAVLICLFLSDIGELRVILTK 68

Query: 61  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 118
           RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK
Sbjct: 69  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 125

[Close]
BLAST of Carg21525-RA vs. ExPASy TrEMBL
Match: A0A5A7US85 (Nudix hydrolase 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002110 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.5e-46
Identity = 101/117 (86.32%), Postives = 110/117 (94.02%), Query Frame = 0 

Query: 1   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTK 60
           GED+LQRL+ALAEHFR+ NSSQS    PP PAAAQLTNRAAVLICLFL+DIGELRVILTK
Sbjct: 7   GEDILQRLKALAEHFRSSNSSQSLPSLPPTPAAAQLTNRAAVLICLFLTDIGELRVILTK 66

Query: 61  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 118
           RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAP+LVN++ VL+P+VNK
Sbjct: 67  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPALVNIITVLQPFVNK 123

[Close]
BLAST of Carg21525-RA vs. ExPASy TrEMBL
Match: A0A1S3B6L8 (nudix hydrolase 11 OS=Cucumis melo OX=3656 GN=LOC103486751 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.5e-46
Identity = 101/117 (86.32%), Postives = 110/117 (94.02%), Query Frame = 0 

Query: 1   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTK 60
           GED+LQRL+ALAEHFR+ NSSQS    PP PAAAQLTNRAAVLICLFL+DIGELRVILTK
Sbjct: 7   GEDILQRLKALAEHFRSSNSSQSLPSLPPTPAAAQLTNRAAVLICLFLTDIGELRVILTK 66

Query: 61  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 118
           RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAP+LVN++ VL+P+VNK
Sbjct: 67  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPALVNIITVLQPFVNK 123

[Close]
BLAST of Carg21525-RA vs. ExPASy TrEMBL
Match: A0A6J1CE91 (nudix hydrolase 11-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010864 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.8e-45
Identity = 100/117 (85.47%), Postives = 105/117 (89.74%), Query Frame = 0 

Query: 1   GEDVLQRLQALAEHFRTGNSSQSPTLPPPDPAAAQLTNRAAVLICLFLSDIGELRVILTK 60
           GEDVLQRLQ LAEHFRTG+SSQS   PPP PAA Q TNRAAVLICLFL D GE+RVILTK
Sbjct: 7   GEDVLQRLQTLAEHFRTGSSSQSLPSPPPTPAAVQFTNRAAVLICLFLGDYGEIRVILTK 66

Query: 61  RASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEIGLAPSLVNVVAVLEPYVNK 118
           RASTLSSHSGEVALPGGKRD SD DDVATALREAEEEIGLAP+LV VV+VLEP+VNK
Sbjct: 67  RASTLSSHSGEVALPGGKRDPSDVDDVATALREAEEEIGLAPALVEVVSVLEPFVNK 123

[Close]
BLAST of Carg21525-RA vs. TAIR 10
Match: AT5G45940.1 (nudix hydrolase homolog 11 )

HSP 1 Score: 109.0 bits (271), Expect = 3.5e-24
Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 0 

Query: 40  AAVLICLF---LSDIGELRVILTKRASTLSSHSGEVALPGGKRDLSDADDVATALREAEE 99
           +AVL+CL+     D  ELRVILTKR++TLSSH GEVALPGGKRD  D DD+ATALREA E
Sbjct: 34  SAVLVCLYQEQREDKNELRVILTKRSTTLSSHPGEVALPGGKRDQEDKDDIATALREARE 93

Query: 100 EIGLAPSLVNVVAVLEPYVNK 118
           EIGL PSLV +++VLEP+VNK
Sbjct: 94  EIGLDPSLVTIISVLEPFVNK 114

[Close]
BLAST of Carg21525-RA vs. TAIR 10
Match: AT5G45940.2 (nudix hydrolase homolog 11 )

HSP 1 Score: 109.0 bits (271), Expect = 3.5e-24
Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 0 

Query: 40  AAVLICLF---LSDIGELRVILTKRASTLSSHSGEVALPGGKRDLSDADDVATALREAEE 99
           +AVL+CL+     D  ELRVILTKR++TLSSH GEVALPGGKRD  D DD+ATALREA E
Sbjct: 34  SAVLVCLYQEQREDKNELRVILTKRSTTLSSHPGEVALPGGKRDQEDKDDIATALREARE 93

Query: 100 EIGLAPSLVNVVAVLEPYVNK 118
           EIGL PSLV +++VLEP+VNK
Sbjct: 94  EIGLDPSLVTIISVLEPFVNK 114

[Close]
BLAST of Carg21525-RA vs. TAIR 10
Match: AT2G33980.1 (nudix hydrolase homolog 22 )

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-23
Identity = 56/79 (70.89%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 39  RAAVLICLFLSDIGELRVILTKRASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEI 98
           +AAVLICLF  D G+LRVILTKR+STLS+HSGEV+LPGGK +  D DD  TA REAEEEI
Sbjct: 75  KAAVLICLFEGDDGDLRVILTKRSSTLSTHSGEVSLPGGKAEEHDKDDGITATREAEEEI 134

Query: 99  GLAPSLVNVVAVLEPYVNK 118
           GL PSLV+VVA LEP++++
Sbjct: 135 GLDPSLVDVVAFLEPFLSQ 153

[Close]
BLAST of Carg21525-RA vs. TAIR 10
Match: AT1G28960.1 (nudix hydrolase homolog 15 )

HSP 1 Score: 105.1 bits (261), Expect = 5.0e-23
Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 0 

Query: 39  RAAVLICLFLSDIGELRVILTKRASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEI 98
           RAAVLICLF  D G+LRVILTKR+S LS+HSGEV+LPGGK +  D DD  TA REAEEEI
Sbjct: 101 RAAVLICLFEGDDGDLRVILTKRSSKLSTHSGEVSLPGGKAEEDDKDDGMTATREAEEEI 160

Query: 99  GLAPSLVNVVAVLEPYVNK 118
           GL PSLV+VV  LEP+++K
Sbjct: 161 GLDPSLVDVVTSLEPFLSK 179

[Close]
BLAST of Carg21525-RA vs. TAIR 10
Match: AT1G28960.4 (nudix hydrolase homolog 15 )

HSP 1 Score: 105.1 bits (261), Expect = 5.0e-23
Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 0 

Query: 39  RAAVLICLFLSDIGELRVILTKRASTLSSHSGEVALPGGKRDLSDADDVATALREAEEEI 98
           RAAVLICLF  D G+LRVILTKR+S LS+HSGEV+LPGGK +  D DD  TA REAEEEI
Sbjct: 101 RAAVLICLFEGDDGDLRVILTKRSSKLSTHSGEVSLPGGKAEEDDKDDGMTATREAEEEI 160

Query: 99  GLAPSLVNVVAVLEPYVNK 118
           GL PSLV+VV  LEP+++K
Sbjct: 161 GLDPSLVDVVTSLEPFLSK 179

The following BLAST results are available for this feature:
BLAST of Carg21525-RA vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7019593.11.8e-75100.00Nudix hydrolase 11, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6583969.11.0e-54100.00Nudix hydrolase 15, mitochondrial, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023001749.13.0e-5499.15nudix hydrolase 11-like [Cucurbita maxima][more]
XP_022927216.13.0e-5499.15nudix hydrolase 11-like [Cucurbita moschata] >XP_022927217.1 nudix hydrolase 11-... [more]
KAG7019588.13.0e-5499.15Nudix hydrolase 11, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Carg21525-RA vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LET24.9e-2370.37Nudix hydrolase 11 OS=Arabidopsis thaliana OX=3702 GN=NUDT11 PE=1 SV=2[more]
O229513.2e-2270.89Nudix hydrolase 22, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT22 PE=2... [more]
Q8GYB17.1e-2270.89Nudix hydrolase 15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT15 PE=1... [more]
Q99P302.5e-1151.90Peroxisomal coenzyme A diphosphatase NUDT7 OS=Mus musculus OX=10090 GN=Nudt7 PE=... [more]
P0C0241.3e-1050.00Peroxisomal coenzyme A diphosphatase NUDT7 OS=Homo sapiens OX=9606 GN=NUDT7 PE=1... [more]
BLAST of Carg21525-RA vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EH291.5e-5499.15nudix hydrolase 11-like OS=Cucurbita moschata OX=3662 GN=LOC111434132 PE=4 SV=1[more]
A0A6J1KNJ71.5e-5499.15nudix hydrolase 11-like OS=Cucurbita maxima OX=3661 GN=LOC111495791 PE=4 SV=1[more]
A0A5A7US851.5e-4686.32Nudix hydrolase 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G00... [more]
A0A1S3B6L81.5e-4686.32nudix hydrolase 11 OS=Cucumis melo OX=3656 GN=LOC103486751 PE=4 SV=1[more]
A0A6J1CE912.8e-4585.47nudix hydrolase 11-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101086... [more]
BLAST of Carg21525-RA vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G45940.13.5e-2470.37nudix hydrolase homolog 11 [more]
AT5G45940.23.5e-2470.37nudix hydrolase homolog 11 [more]
AT2G33980.12.3e-2370.89nudix hydrolase homolog 22 [more]
AT1G28960.15.0e-2370.89nudix hydrolase homolog 15 [more]
AT1G28960.45.0e-2370.89nudix hydrolase homolog 15 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 14..137
e-value: 1.2E-26
score: 95.6
NoneNo IPR availablePANTHERPTHR12992:SF37NUDIX HYDROLASE 15, MITOCHONDRIAL-LIKEcoord: 2..122
IPR000086NUDIX hydrolase domainPFAMPF00293NUDIXcoord: 38..126
e-value: 1.0E-9
score: 38.5
IPR000086NUDIX hydrolase domainPROSITEPS51462NUDIXcoord: 37..156
score: 11.462234
IPR045121Coenzyme A pyrophosphatasePANTHERPTHR12992NUDIX HYDROLASEcoord: 2..122
IPR045121Coenzyme A pyrophosphataseCDDcd03426CoAsecoord: 39..125
e-value: 1.57509E-37
score: 124.176
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 37..128

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg21525Carg21525gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg21525-RA:5Carg21525-RA:5exon
Carg21525-RA:4Carg21525-RA:4exon
Carg21525-RA:3Carg21525-RA:3exon
Carg21525-RA:2Carg21525-RA:2exon
Carg21525-RA:1Carg21525-RA:1exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg21525-RA:three_prime_utrCarg21525-RA:three_prime_utr_4three_prime_UTR
Carg21525-RA:three_prime_utrCarg21525-RA:three_prime_utr_3three_prime_UTR
Carg21525-RA:three_prime_utrCarg21525-RA:three_prime_utr_2three_prime_UTR
Carg21525-RA:three_prime_utrCarg21525-RA:three_prime_utrthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg21525-RA:cdsCarg21525-RA:cds_2CDS
Carg21525-RA:cdsCarg21525-RA:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg21525-RACarg21525-RA-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015938 coenzyme A catabolic process
molecular_function GO:0010945 CoA pyrophosphatase activity
molecular_function GO:0003986 acetyl-CoA hydrolase activity