Homology
BLAST of Carg20742-RA vs. NCBI nr
Match:
KAG7017159.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 959.1 bits (2478), Expect = 1.4e-275
Identity = 475/475 (100.00%), Postives = 475/475 (100.00%), Query Frame = 0
Query: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60
MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR
Sbjct: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60
Query: 61 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120
CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY
Sbjct: 61 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120
Query: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180
RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180
Query: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
Query: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
Query: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
Query: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
Query: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 476
VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 475
BLAST of Carg20742-RA vs. NCBI nr
Match:
KAG6579716.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 958.0 bits (2475), Expect = 3.1e-275
Identity = 474/475 (99.79%), Postives = 475/475 (100.00%), Query Frame = 0
Query: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60
MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR
Sbjct: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60
Query: 61 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120
CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY
Sbjct: 61 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120
Query: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180
RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180
Query: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
Query: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
Query: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
Query: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
EELFRNMLANGVKPDGVACTLMIKELCLE+RVVDGFNLCNEVDRNGYLSSIDSDIYSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEDRVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
Query: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 476
VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 475
BLAST of Carg20742-RA vs. NCBI nr
Match:
XP_022928928.1 (pentatricopeptide repeat-containing protein At5g47360 [Cucurbita moschata])
HSP 1 Score: 953.0 bits (2462), Expect = 9.9e-274
Identity = 472/475 (99.37%), Postives = 473/475 (99.58%), Query Frame = 0
Query: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60
MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQK NGNVEKTLATVKTKLDSR
Sbjct: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKKNGNVEKTLATVKTKLDSR 60
Query: 61 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120
CVNQVLHKCS ELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY
Sbjct: 61 CVNQVLHKCSLELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120
Query: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180
RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKG+M
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGEM 180
Query: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
Query: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
Query: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
Query: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
Query: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 476
VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 475
BLAST of Carg20742-RA vs. NCBI nr
Match:
XP_023551479.1 (pentatricopeptide repeat-containing protein At5g47360 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 952.2 bits (2460), Expect = 1.7e-273
Identity = 470/475 (98.95%), Postives = 474/475 (99.79%), Query Frame = 0
Query: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60
MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTL TVKTKLDSR
Sbjct: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLTTVKTKLDSR 60
Query: 61 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120
CVN+VLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCL+FNVIEDY
Sbjct: 61 CVNEVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLVFNVIEDY 120
Query: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180
RREGCLVDIGMFKVILNLCKEGKLAKEALSILG+MAEFHLRADTTMYNLVIRLFTEKG+M
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGEMAEFHLRADTTMYNLVIRLFTEKGEM 180
Query: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
Query: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
Query: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
Query: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
Query: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 476
VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 475
BLAST of Carg20742-RA vs. NCBI nr
Match:
XP_022969835.1 (pentatricopeptide repeat-containing protein At5g47360 [Cucurbita maxima])
HSP 1 Score: 935.3 bits (2416), Expect = 2.1e-268
Identity = 462/475 (97.26%), Postives = 469/475 (98.74%), Query Frame = 0
Query: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60
MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATV+TKLDSR
Sbjct: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVRTKLDSR 60
Query: 61 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120
CVNQVLHKCSFELS MGLRFFIWAGRQPNYRHSSFMY RACELIGLNRSPCLLFNVIEDY
Sbjct: 61 CVNQVLHKCSFELSPMGLRFFIWAGRQPNYRHSSFMYARACELIGLNRSPCLLFNVIEDY 120
Query: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180
RREGCL+DIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKG+M
Sbjct: 121 RREGCLLDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGEM 180
Query: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMK+NGCAPNTVAYSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKENGCAPNTVAYSVL 240
Query: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
LNGASRHGDLEKLMELLEEMEKQGG CGPNTVTYTSIIQSLCEVGQPLEALKILDRMED
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGNCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDS 300
Query: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
GC+PNRVTVS LVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA
Sbjct: 301 GCSPNRVTVSALVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
Query: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEV+RNGYLSSIDSDIYSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVNRNGYLSSIDSDIYSLLL 420
Query: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 476
VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFG Q+LVMHLGGIRE
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGGQDLVMHLGGIRE 475
BLAST of Carg20742-RA vs. ExPASy Swiss-Prot
Match:
Q9LVS3 (Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana OX=3702 GN=At5g47360 PE=2 SV=1)
HSP 1 Score: 430.6 bits (1106), Expect = 2.2e-119
Identity = 217/459 (47.28%), Postives = 315/459 (68.63%), Query Frame = 0
Query: 13 SFRFKISTLSTLQ-LSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSRCVNQVLHKCSF 72
S R + S +S L+ L+TVS+A+ Y LQ N+EK LA+ +LDS C+N+VL +C
Sbjct: 13 SLRSQPSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRCDP 72
Query: 73 ELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDYRREGCLVDIGM 132
Q GLRFFIWAG ++RHS++MYT+AC+++ + P L+ VIE YR+E C V++
Sbjct: 73 NQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKT 132
Query: 133 FKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDMDKAMELLKEMD 192
+++L LC + LA EAL +L K EF++ ADT YNLVIRLF +KGD++ A L+KEMD
Sbjct: 133 MRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMD 192
Query: 193 SVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVLLNGASRHGDLE 252
V + P++ITY +M+ G+C+ G+++DA+ L K M + C N+V YS +L G + GD+E
Sbjct: 193 CVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDME 252
Query: 253 KLMELLEEMEKQ--GGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDFGCAPNRVTV 312
+ +ELL EMEK+ GG PN VTYT +IQ+ CE + EAL +LDRM + GC PNRVT
Sbjct: 253 RALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTA 312
Query: 313 SVLVKEFCK-DGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEAEELFRNML 372
VL++ + D ++ KLID++ GG S +C+SS +SLI+MKR EAE++FR ML
Sbjct: 313 CVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLML 372
Query: 373 ANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLLVGLCEHDH 432
GV+PDG+AC+ + +ELCL ER +D F L E+++ S+IDSDI+++LL+GLC+ +
Sbjct: 373 VRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGN 432
Query: 433 SVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLV 468
S +AAKLA+ ML K +RLK + E II+ +KK GD++L+
Sbjct: 433 SWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDEDLM 471
BLAST of Carg20742-RA vs. ExPASy Swiss-Prot
Match:
P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)
HSP 1 Score: 174.9 bits (442), Expect = 2.2e-42
Identity = 108/420 (25.71%), Postives = 213/420 (50.71%), Query Frame = 0
Query: 36 YDHLQKNNGNVEK-TLATVKTKLDSR--CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRH 95
Y L+ ++ V K LA ++ +D R + +VL +C + +G RFF+WA +QP Y H
Sbjct: 71 YRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCG-DAGNLGYRFFLWATKQPGYFH 130
Query: 96 SSFMYTRACELIGLNRSPCLLFNVIEDYRREGC-LVDIGMFKVILNLCKEGKLAKEALSI 155
S + ++ R ++ +IE+ R+ L++ +F V++ + K+A+ +
Sbjct: 131 SYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEV 190
Query: 156 LGKMAEFHLRADTTMYNLVIRLFTEKGDMDKAMELLKEMDSVDIDPNMITYIAMLKGFCD 215
L +M ++ L D ++ ++ + G + +A ++ ++M PN+ + ++L G+C
Sbjct: 191 LDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCR 250
Query: 216 VGRLEDAYGLFKVMKDNGCAPNTVAYSVLLNGASRHGDLEKLMELLEEMEKQGGTCGPNT 275
G+L +A + MK+ G P+ V ++ LL+G + G + +L+ +M K+G PN
Sbjct: 251 EGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG--FEPNV 310
Query: 276 VTYTSIIQSLCEVGQPL-EALKILDRMEDFGCAPNRVTVSVLVKEFCKDGHMEEAYKLID 335
YT +IQ+LC + + EA+++ ME +GC + VT + L+ FCK G +++ Y ++D
Sbjct: 311 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 370
Query: 336 RVAARGGASYGDCYSSLVISLIKMKRIAEAEELFRNMLANGVKPDGVACTLMIKELCLEE 395
+ +G Y ++++ K ++ E EL M G PD + ++I+ C
Sbjct: 371 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 430
Query: 396 RVVDGFNLCNEVDRNGYLSSIDSDIYSLLLVGLCEHDHSVDAAKLARLMLQKGIRLKPHY 451
V + L NE++ NG +D+ + +++ G ++A + M+ +GI P Y
Sbjct: 431 EVKEAVRLWNEMEANGLSPGVDT--FVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQY 484
BLAST of Carg20742-RA vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 167.5 bits (423), Expect = 3.5e-40
Identity = 102/336 (30.36%), Postives = 165/336 (49.11%), Query Frame = 0
Query: 122 REGCLVDIGMFKVILN-LCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 181
++G D F ++N LCK G + K A+ I+ M + D YN VI + G++
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHV-KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 347
Query: 182 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 241
+A+E+L +M + D PN +TY ++ C ++E+A L +V+ G P+ ++ L
Sbjct: 348 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 407
Query: 242 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 301
+ G + MEL EEM +G C P+ TY +I SLC G+ EAL +L +ME
Sbjct: 408 IQGLCLTRNHRVAMELFEEMRSKG--CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 467
Query: 302 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 361
GCA + +T + L+ FCK EA ++ D + G + Y++L+ L K +R+ +A
Sbjct: 468 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 527
Query: 362 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 421
+L M+ G KPD ++ C + ++ + NG D Y L+
Sbjct: 528 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG--CEPDIVTYGTLI 587
Query: 422 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIK 457
GLC+ A+KL R + KGI L PH +I+
Sbjct: 588 SGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618
BLAST of Carg20742-RA vs. ExPASy Swiss-Prot
Match:
O04491 (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana OX=3702 GN=At1g09680 PE=3 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 1.3e-39
Identity = 91/322 (28.26%), Postives = 172/322 (53.42%), Query Frame = 0
Query: 124 GCLVDIGMFKVILN-LCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDMDK 183
G +++ +F +++N CKEG ++ +A + ++ + L+ +N +I + + G++D+
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNIS-DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 294
Query: 184 AMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVLLN 243
L +M+ P++ TY A++ C +++ A+GLF M G PN V ++ L++
Sbjct: 295 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 354
Query: 244 GASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDFGC 303
G SR+G+++ + E ++M +G P+ V Y +++ C+ G + A I+D M G
Sbjct: 355 GHSRNGEIDLMKESYQKMLSKG--LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 414
Query: 304 APNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEAEE 363
P+++T + L+ FC+ G +E A ++ + G +S+LV + K R+ +AE
Sbjct: 415 RPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAER 474
Query: 364 LFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLLVG 423
R ML G+KPD V T+M+ C + GF L E+ +G++ S+ + Y++LL G
Sbjct: 475 ALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT--YNVLLNG 534
Query: 424 LCEHDHSVDAAKLARLMLQKGI 445
LC+ +A L ML G+
Sbjct: 535 LCKLGQMKNADMLLDAMLNIGV 551
BLAST of Carg20742-RA vs. ExPASy Swiss-Prot
Match:
Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)
HSP 1 Score: 164.1 bits (414), Expect = 3.9e-39
Identity = 100/362 (27.62%), Postives = 186/362 (51.38%), Query Frame = 0
Query: 85 GRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDYRREGCLVDIGMFKVILN-LCKEGK 144
G +P+ + + C L G LL + + +Y GC + + +LN +CK G+
Sbjct: 188 GHKPDLITINTLVNGLC-LSGKEAEAMLLIDKMVEY---GCQPNAVTYGPVLNVMCKSGQ 247
Query: 145 LAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDMDKAMELLKEMDSVDIDPNMITYI 204
A A+ +L KM E +++ D Y+++I + G +D A L EM+ I N+ITY
Sbjct: 248 TAL-AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 307
Query: 205 AMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVLLNGASRHGDLEKLMELLEEMEKQ 264
++ GFC+ GR +D L + M PN V +SVL++ + G L + EL +EM +
Sbjct: 308 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 367
Query: 265 GGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDFGCAPNRVTVSVLVKEFCKDGHME 324
G P+T+TYTS+I C+ +A +++D M GC PN T ++L+ +CK ++
Sbjct: 368 G--IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 427
Query: 325 EAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEAEELFRNMLANGVKPDGVACTLMI 384
+ +L +++ RG + Y++L+ ++ ++ A+ELF+ M++ V P+ V +++
Sbjct: 428 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 487
Query: 385 KELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLLVGLCEHDHSVDAAKLARLMLQKG 444
LC + +++++ +D IY++++ G+C DA L + KG
Sbjct: 488 DGLCDNGESEKALEIFEKIEKS--KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 540
Query: 445 IR 446
++
Sbjct: 548 VK 540
BLAST of Carg20742-RA vs. ExPASy TrEMBL
Match:
A0A6J1EQI2 (pentatricopeptide repeat-containing protein At5g47360 OS=Cucurbita moschata OX=3662 GN=LOC111435690 PE=3 SV=1)
HSP 1 Score: 953.0 bits (2462), Expect = 4.8e-274
Identity = 472/475 (99.37%), Postives = 473/475 (99.58%), Query Frame = 0
Query: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60
MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQK NGNVEKTLATVKTKLDSR
Sbjct: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKKNGNVEKTLATVKTKLDSR 60
Query: 61 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120
CVNQVLHKCS ELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY
Sbjct: 61 CVNQVLHKCSLELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120
Query: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180
RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKG+M
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGEM 180
Query: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
Query: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
Query: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
Query: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
Query: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 476
VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 475
BLAST of Carg20742-RA vs. ExPASy TrEMBL
Match:
A0A6J1I125 (pentatricopeptide repeat-containing protein At5g47360 OS=Cucurbita maxima OX=3661 GN=LOC111468919 PE=3 SV=1)
HSP 1 Score: 935.3 bits (2416), Expect = 1.0e-268
Identity = 462/475 (97.26%), Postives = 469/475 (98.74%), Query Frame = 0
Query: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60
MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATV+TKLDSR
Sbjct: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVRTKLDSR 60
Query: 61 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120
CVNQVLHKCSFELS MGLRFFIWAGRQPNYRHSSFMY RACELIGLNRSPCLLFNVIEDY
Sbjct: 61 CVNQVLHKCSFELSPMGLRFFIWAGRQPNYRHSSFMYARACELIGLNRSPCLLFNVIEDY 120
Query: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180
RREGCL+DIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKG+M
Sbjct: 121 RREGCLLDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGEM 180
Query: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMK+NGCAPNTVAYSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKENGCAPNTVAYSVL 240
Query: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
LNGASRHGDLEKLMELLEEMEKQGG CGPNTVTYTSIIQSLCEVGQPLEALKILDRMED
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGNCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDS 300
Query: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
GC+PNRVTVS LVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA
Sbjct: 301 GCSPNRVTVSALVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
Query: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEV+RNGYLSSIDSDIYSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVNRNGYLSSIDSDIYSLLL 420
Query: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 476
VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFG Q+LVMHLGGIRE
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGGQDLVMHLGGIRE 475
BLAST of Carg20742-RA vs. ExPASy TrEMBL
Match:
A0A0A0LI44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123590 PE=4 SV=1)
HSP 1 Score: 828.2 bits (2138), Expect = 1.8e-236
Identity = 402/475 (84.63%), Postives = 443/475 (93.26%), Query Frame = 0
Query: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60
MALFRI PR SSF ISTLST L+T+SS+DLFYDHL+K+NGN++KTLAT+KTKLDSR
Sbjct: 1 MALFRISCPRSSSFLLNISTLSTFHLNTLSSSDLFYDHLEKSNGNLDKTLATLKTKLDSR 60
Query: 61 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120
CVN+VL+KCSFELSQMGLRFFIWAGRQPNYRHSSFMY+RACELIG+N SPCLLFNVIEDY
Sbjct: 61 CVNEVLYKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACELIGINVSPCLLFNVIEDY 120
Query: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180
RREGCLVDI MFK+ILNLCKE KLAKEALSIL KM+EFHLRADTTMYNLVIRLFTEKG+M
Sbjct: 121 RREGCLVDIRMFKIILNLCKEAKLAKEALSILRKMSEFHLRADTTMYNLVIRLFTEKGEM 180
Query: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
DKAMEL+KEMDSVDI PNMITYI+MLKGFCDVGR EDAYGLFK MK+NGCAPNTV YSVL
Sbjct: 181 DKAMELMKEMDSVDIHPNMITYISMLKGFCDVGRWEDAYGLFKDMKENGCAPNTVVYSVL 240
Query: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
+NGA R +++LME+L+EMEKQGGTC PNTVTYTSIIQSLCE G PLEALK+LDRME++
Sbjct: 241 VNGAIRLRIMDRLMEMLKEMEKQGGTCSPNTVTYTSIIQSLCEEGHPLEALKVLDRMEEY 300
Query: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
G APNRV VS LVKEFCKDGH+EEAYKLIDRV ARGG SYGDCYSSLV++L+KMK+IAEA
Sbjct: 301 GYAPNRVAVSFLVKEFCKDGHVEEAYKLIDRVVARGGVSYGDCYSSLVVTLVKMKKIAEA 360
Query: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
E+LFRNMLANGVKPDGVAC+LMI+ELCLEERV+DGFNLC EVDRNGYL SID+DIYSLLL
Sbjct: 361 EKLFRNMLANGVKPDGVACSLMIRELCLEERVLDGFNLCYEVDRNGYLCSIDADIYSLLL 420
Query: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 476
VGLCEHDHSVDAAKLARLML+KGIRLKPHYAESIIKH+KKF D+ LVMHLGGIR+
Sbjct: 421 VGLCEHDHSVDAAKLARLMLKKGIRLKPHYAESIIKHLKKFEDRELVMHLGGIRK 475
BLAST of Carg20742-RA vs. ExPASy TrEMBL
Match:
A0A6J1DNK5 (pentatricopeptide repeat-containing protein At5g47360 OS=Momordica charantia OX=3673 GN=LOC111022875 PE=3 SV=1)
HSP 1 Score: 819.7 bits (2116), Expect = 6.3e-234
Identity = 398/475 (83.79%), Postives = 433/475 (91.16%), Query Frame = 0
Query: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60
MALF IF R SF KIS LS L LSTVSSADLFYDHLQKNNGNVEK LATVKT LDSR
Sbjct: 1 MALFGIFSFRSFSFGLKISKLSALHLSTVSSADLFYDHLQKNNGNVEKILATVKTTLDSR 60
Query: 61 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120
CVNQVLHKCSFELS MGLRFFIWAGRQPNYRHSSFMY+RACELIG++RSPCLL NVIEDY
Sbjct: 61 CVNQVLHKCSFELSLMGLRFFIWAGRQPNYRHSSFMYSRACELIGIDRSPCLLLNVIEDY 120
Query: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180
RREGC+VDI MFKV+LNLCKE KLA EAL ILGKM EFHLRADTT+YNLV+RLF EKG+M
Sbjct: 121 RREGCVVDIRMFKVMLNLCKEAKLANEALLILGKMPEFHLRADTTIYNLVVRLFIEKGEM 180
Query: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
DKAM+L++EMDS+DI PNMITYIAMLKGFCDVGRLEDAYGLFK MK+NGC+PNT+AYS+L
Sbjct: 181 DKAMKLMEEMDSIDIHPNMITYIAMLKGFCDVGRLEDAYGLFKAMKENGCSPNTLAYSIL 240
Query: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
LNGASR G EK+MELLEEMEK+GG C PNTVTYTSIIQSLCE+GQPLEALKILDRME+
Sbjct: 241 LNGASRQGITEKIMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMENS 300
Query: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
GCAPNRVTV L+KEFCKDGHMEE Y+LI RV ARGG SYGDCYSSLV+SL KMK+IA A
Sbjct: 301 GCAPNRVTVRTLIKEFCKDGHMEEVYELIHRVVARGGTSYGDCYSSLVVSLAKMKKIAAA 360
Query: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
EELFRNMLA+GVKPDGVAC++MIKELCLEERV+DG+NLCNEVDRNGYLSSIDSDIYSLLL
Sbjct: 361 EELFRNMLASGVKPDGVACSVMIKELCLEERVLDGYNLCNEVDRNGYLSSIDSDIYSLLL 420
Query: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 476
VGLCEHDH +DA KLARLML+KGIRLKPHYA+ +IKH+ KFGDQ LVM LGGIR+
Sbjct: 421 VGLCEHDHPMDAEKLARLMLKKGIRLKPHYADHVIKHLNKFGDQELVMQLGGIRK 475
BLAST of Carg20742-RA vs. ExPASy TrEMBL
Match:
A0A1S3B4L9 (pentatricopeptide repeat-containing protein At5g47360 OS=Cucumis melo OX=3656 GN=LOC103485755 PE=4 SV=1)
HSP 1 Score: 799.3 bits (2063), Expect = 8.9e-228
Identity = 393/475 (82.74%), Postives = 433/475 (91.16%), Query Frame = 0
Query: 1 MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60
MALFRI YPR SS ISTLST LST+SS+DLFYDHL+KNNGNVEKTLATVKTKLDSR
Sbjct: 1 MALFRISYPRSSSILLNISTLSTFHLSTLSSSDLFYDHLEKNNGNVEKTLATVKTKLDSR 60
Query: 61 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120
CVN+VL+KCS ELSQMGLRFFIWAGRQPNYRH+SFMY+RACELIG+N SPCLLFNVIEDY
Sbjct: 61 CVNEVLYKCSSELSQMGLRFFIWAGRQPNYRHTSFMYSRACELIGINVSPCLLFNVIEDY 120
Query: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180
RREGCLVDI +F++ILNLCKE KL KEALSIL KM+EFHLRADTT+YNLVIRL TEKG+M
Sbjct: 121 RREGCLVDIRIFQIILNLCKEAKLTKEALSILRKMSEFHLRADTTIYNLVIRLCTEKGEM 180
Query: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240
DKAMEL+KEMDSVDI PNMITYI+M+KGFCDVGR EDAYGLFK MK+NG APNTV YSVL
Sbjct: 181 DKAMELMKEMDSVDIHPNMITYISMIKGFCDVGRWEDAYGLFKAMKENGYAPNTVVYSVL 240
Query: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300
+NGA R ++KLME+LEEMEKQGGTC PNTVTYTSIIQSLCE G LEALK+LDRME++
Sbjct: 241 VNGAVRLRIMDKLMEMLEEMEKQGGTCRPNTVTYTSIIQSLCEQGFLLEALKVLDRMEEY 300
Query: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360
G APNRV V LVKEFCKDGH+EEAYKLIDRV ARGGASYGDC SSLVISL+KMK+I EA
Sbjct: 301 GHAPNRVAVGYLVKEFCKDGHVEEAYKLIDRVVARGGASYGDCCSSLVISLVKMKKIPEA 360
Query: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420
E+LFRNMLANGVKPDGVAC+LMI+ELCLEERV+DGF+LC EVDRNGYL ID+D+YSLLL
Sbjct: 361 EKLFRNMLANGVKPDGVACSLMIRELCLEERVLDGFSLCYEVDRNGYLCYIDADVYSLLL 420
Query: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 476
VGL +HDHSVDAA LARLML+KGIRLKPHYAESIIKH+KKF DQ L+MHLGGIR+
Sbjct: 421 VGLYQHDHSVDAAILARLMLKKGIRLKPHYAESIIKHLKKFEDQELIMHLGGIRK 475
BLAST of Carg20742-RA vs. TAIR 10
Match:
AT5G47360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 430.6 bits (1106), Expect = 1.6e-120
Identity = 217/459 (47.28%), Postives = 315/459 (68.63%), Query Frame = 0
Query: 13 SFRFKISTLSTLQ-LSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSRCVNQVLHKCSF 72
S R + S +S L+ L+TVS+A+ Y LQ N+EK LA+ +LDS C+N+VL +C
Sbjct: 13 SLRSQPSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRCDP 72
Query: 73 ELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDYRREGCLVDIGM 132
Q GLRFFIWAG ++RHS++MYT+AC+++ + P L+ VIE YR+E C V++
Sbjct: 73 NQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKT 132
Query: 133 FKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDMDKAMELLKEMD 192
+++L LC + LA EAL +L K EF++ ADT YNLVIRLF +KGD++ A L+KEMD
Sbjct: 133 MRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMD 192
Query: 193 SVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVLLNGASRHGDLE 252
V + P++ITY +M+ G+C+ G+++DA+ L K M + C N+V YS +L G + GD+E
Sbjct: 193 CVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDME 252
Query: 253 KLMELLEEMEKQ--GGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDFGCAPNRVTV 312
+ +ELL EMEK+ GG PN VTYT +IQ+ CE + EAL +LDRM + GC PNRVT
Sbjct: 253 RALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTA 312
Query: 313 SVLVKEFCK-DGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEAEELFRNML 372
VL++ + D ++ KLID++ GG S +C+SS +SLI+MKR EAE++FR ML
Sbjct: 313 CVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLML 372
Query: 373 ANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLLVGLCEHDH 432
GV+PDG+AC+ + +ELCL ER +D F L E+++ S+IDSDI+++LL+GLC+ +
Sbjct: 373 VRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGN 432
Query: 433 SVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLV 468
S +AAKLA+ ML K +RLK + E II+ +KK GD++L+
Sbjct: 433 SWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDEDLM 471
BLAST of Carg20742-RA vs. TAIR 10
Match:
AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 174.9 bits (442), Expect = 1.6e-43
Identity = 108/420 (25.71%), Postives = 213/420 (50.71%), Query Frame = 0
Query: 36 YDHLQKNNGNVEK-TLATVKTKLDSR--CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRH 95
Y L+ ++ V K LA ++ +D R + +VL +C + +G RFF+WA +QP Y H
Sbjct: 71 YRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCG-DAGNLGYRFFLWATKQPGYFH 130
Query: 96 SSFMYTRACELIGLNRSPCLLFNVIEDYRREGC-LVDIGMFKVILNLCKEGKLAKEALSI 155
S + ++ R ++ +IE+ R+ L++ +F V++ + K+A+ +
Sbjct: 131 SYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEV 190
Query: 156 LGKMAEFHLRADTTMYNLVIRLFTEKGDMDKAMELLKEMDSVDIDPNMITYIAMLKGFCD 215
L +M ++ L D ++ ++ + G + +A ++ ++M PN+ + ++L G+C
Sbjct: 191 LDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCR 250
Query: 216 VGRLEDAYGLFKVMKDNGCAPNTVAYSVLLNGASRHGDLEKLMELLEEMEKQGGTCGPNT 275
G+L +A + MK+ G P+ V ++ LL+G + G + +L+ +M K+G PN
Sbjct: 251 EGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG--FEPNV 310
Query: 276 VTYTSIIQSLCEVGQPL-EALKILDRMEDFGCAPNRVTVSVLVKEFCKDGHMEEAYKLID 335
YT +IQ+LC + + EA+++ ME +GC + VT + L+ FCK G +++ Y ++D
Sbjct: 311 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 370
Query: 336 RVAARGGASYGDCYSSLVISLIKMKRIAEAEELFRNMLANGVKPDGVACTLMIKELCLEE 395
+ +G Y ++++ K ++ E EL M G PD + ++I+ C
Sbjct: 371 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 430
Query: 396 RVVDGFNLCNEVDRNGYLSSIDSDIYSLLLVGLCEHDHSVDAAKLARLMLQKGIRLKPHY 451
V + L NE++ NG +D+ + +++ G ++A + M+ +GI P Y
Sbjct: 431 EVKEAVRLWNEMEANGLSPGVDT--FVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQY 484
BLAST of Carg20742-RA vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 167.5 bits (423), Expect = 2.5e-41
Identity = 102/336 (30.36%), Postives = 165/336 (49.11%), Query Frame = 0
Query: 122 REGCLVDIGMFKVILN-LCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 181
++G D F ++N LCK G + K A+ I+ M + D YN VI + G++
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHV-KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 347
Query: 182 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 241
+A+E+L +M + D PN +TY ++ C ++E+A L +V+ G P+ ++ L
Sbjct: 348 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 407
Query: 242 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 301
+ G + MEL EEM +G C P+ TY +I SLC G+ EAL +L +ME
Sbjct: 408 IQGLCLTRNHRVAMELFEEMRSKG--CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 467
Query: 302 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 361
GCA + +T + L+ FCK EA ++ D + G + Y++L+ L K +R+ +A
Sbjct: 468 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 527
Query: 362 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 421
+L M+ G KPD ++ C + ++ + NG D Y L+
Sbjct: 528 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG--CEPDIVTYGTLI 587
Query: 422 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIK 457
GLC+ A+KL R + KGI L PH +I+
Sbjct: 588 SGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618
BLAST of Carg20742-RA vs. TAIR 10
Match:
AT1G09680.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 165.6 bits (418), Expect = 9.6e-41
Identity = 91/322 (28.26%), Postives = 172/322 (53.42%), Query Frame = 0
Query: 124 GCLVDIGMFKVILN-LCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDMDK 183
G +++ +F +++N CKEG ++ +A + ++ + L+ +N +I + + G++D+
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNIS-DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 294
Query: 184 AMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVLLN 243
L +M+ P++ TY A++ C +++ A+GLF M G PN V ++ L++
Sbjct: 295 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 354
Query: 244 GASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDFGC 303
G SR+G+++ + E ++M +G P+ V Y +++ C+ G + A I+D M G
Sbjct: 355 GHSRNGEIDLMKESYQKMLSKG--LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 414
Query: 304 APNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEAEE 363
P+++T + L+ FC+ G +E A ++ + G +S+LV + K R+ +AE
Sbjct: 415 RPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAER 474
Query: 364 LFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLLVG 423
R ML G+KPD V T+M+ C + GF L E+ +G++ S+ + Y++LL G
Sbjct: 475 ALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT--YNVLLNG 534
Query: 424 LCEHDHSVDAAKLARLMLQKGI 445
LC+ +A L ML G+
Sbjct: 535 LCKLGQMKNADMLLDAMLNIGV 551
BLAST of Carg20742-RA vs. TAIR 10
Match:
AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 164.1 bits (414), Expect = 2.8e-40
Identity = 100/362 (27.62%), Postives = 186/362 (51.38%), Query Frame = 0
Query: 85 GRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDYRREGCLVDIGMFKVILN-LCKEGK 144
G +P+ + + C L G LL + + +Y GC + + +LN +CK G+
Sbjct: 188 GHKPDLITINTLVNGLC-LSGKEAEAMLLIDKMVEY---GCQPNAVTYGPVLNVMCKSGQ 247
Query: 145 LAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDMDKAMELLKEMDSVDIDPNMITYI 204
A A+ +L KM E +++ D Y+++I + G +D A L EM+ I N+ITY
Sbjct: 248 TAL-AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 307
Query: 205 AMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVLLNGASRHGDLEKLMELLEEMEKQ 264
++ GFC+ GR +D L + M PN V +SVL++ + G L + EL +EM +
Sbjct: 308 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 367
Query: 265 GGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDFGCAPNRVTVSVLVKEFCKDGHME 324
G P+T+TYTS+I C+ +A +++D M GC PN T ++L+ +CK ++
Sbjct: 368 G--IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 427
Query: 325 EAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEAEELFRNMLANGVKPDGVACTLMI 384
+ +L +++ RG + Y++L+ ++ ++ A+ELF+ M++ V P+ V +++
Sbjct: 428 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 487
Query: 385 KELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLLVGLCEHDHSVDAAKLARLMLQKG 444
LC + +++++ +D IY++++ G+C DA L + KG
Sbjct: 488 DGLCDNGESEKALEIFEKIEKS--KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 540
Query: 445 IR 446
++
Sbjct: 548 VK 540
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7017159.1 | 1.4e-275 | 100.00 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG6579716.1 | 3.1e-275 | 99.79 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022928928.1 | 9.9e-274 | 99.37 | pentatricopeptide repeat-containing protein At5g47360 [Cucurbita moschata] | [more] |
XP_023551479.1 | 1.7e-273 | 98.95 | pentatricopeptide repeat-containing protein At5g47360 [Cucurbita pepo subsp. pep... | [more] |
XP_022969835.1 | 2.1e-268 | 97.26 | pentatricopeptide repeat-containing protein At5g47360 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q9LVS3 | 2.2e-119 | 47.28 | Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana OX... | [more] |
P0C8A0 | 2.2e-42 | 25.71 | Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX... | [more] |
Q9LFF1 | 3.5e-40 | 30.36 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
O04491 | 1.3e-39 | 28.26 | Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis th... | [more] |
Q0WKV3 | 3.9e-39 | 27.62 | Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EQI2 | 4.8e-274 | 99.37 | pentatricopeptide repeat-containing protein At5g47360 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1I125 | 1.0e-268 | 97.26 | pentatricopeptide repeat-containing protein At5g47360 OS=Cucurbita maxima OX=366... | [more] |
A0A0A0LI44 | 1.8e-236 | 84.63 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123590 PE=4 SV=1 | [more] |
A0A6J1DNK5 | 6.3e-234 | 83.79 | pentatricopeptide repeat-containing protein At5g47360 OS=Momordica charantia OX=... | [more] |
A0A1S3B4L9 | 8.9e-228 | 82.74 | pentatricopeptide repeat-containing protein At5g47360 OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT5G47360.1 | 1.6e-120 | 47.28 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G49730.1 | 1.6e-43 | 25.71 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G53700.1 | 2.5e-41 | 30.36 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G09680.1 | 9.6e-41 | 28.26 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G12300.1 | 2.8e-40 | 27.62 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |