Carg20186-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20186-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Elongator complex protein 3
Location	Carg_Chr11: 274577 .. 278162 (-)
Sequence length	2035
RNA-Seq Expression	Carg20186-RA
Synteny	Carg20186-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGCCTATTCTACCAAGAAGGTTTTTCTGCTCTCATGGCGACTGCAGTGGTGGCGGAATCGGCTCGGAAACTACCTCGGCCTGGTCGGGGGGGATTCGAAGGTCATGGGTTTTCCGAGGAGGAAGGACGAGTTCGTGCCATTGCTGAGATTGTTAATTCCATGGTCGATCTTTCACGAAAAGGGCAAAACGTCGATCTGAACGCTCTGAAATCCGCTGCCTGCCGGAAATATGGCCTTGCCCGGGCCCCAAAGCTTGTCGAGATGATTGCGGCGCTTCCTGAGTCGGACCGCGAGGCACTGCTGCCGAAGCTTCGAGCCAAGCCGGTTCGAACAGCCTCCGGTATCGCAGTCGTGGCGGTGATGTCTAAACCGCATCGGTGCCCTCATATTGCTACGACGGGGAATATTTGTGTGTACTGCCCCGGGGGACCTGATTCGGACTTTGAGTACAGTACTCAATCTTATACTGGTTATGAGCCCACAAGCATGCGTGCAATTCGTGCAAGGTTGGTTGTAACTTGTAACTTCTGAGATTTTGTATTACCTTTTTCTTCTTCAAGTCTCGAACTTTTTGCTTCACGAGTATTTGTTCCATCTTTATTATTATGTTATTGGATGCCTTACACATCTATATCGAGGAAAGAGCGTGTTTAGAACACAGTATTTTGGCTAAGAAAGTATTAAATTTCTAAATTCATGTATAAAATATTTTTAGCCCAGAGTAAACCGAGGTGGGGTTCTTTGAAAATACTATGGGAATGAAGAAAATGAATGCGAGTAACTGGCAGCTGCTTGTCGTGGGAAATTAAGTATAAGAATCATGTTTTCCTTGGCAGTCTGTTTGCTTCACTAGATATATGAACATCTTTAGGGTGTACTACAATCATTGTTGCTTTTGCTTGTCAGTTCTTAATGATATTTTGTTGCTCTGCATACGTTCTGAGATAATTTTCATCTTACCTGCCACCGCTTTGATTGTAGATACAATCCATATGTCCAGGCTAGAAGTCGGATAGATCAATTGAAGCGTTTGGGCCATAGTGTTGATAAGGTTCCTTTTTCTTCTCTCTAATTTTTTTTTTTTTTTTTTTTTTTTCTTCTAACATAGTAAATTATCATAAAATTGTCTGTTTACTTTCAGGTTGAGTTCATCTTAATGGGTGGGACTTTCATGTCACTGCCAGCTGATTATCGTGATTACTTTATAAGGAATCTTCATGATGCTTTGTCAGGGCATACTTCTGCCAATGTTGAAGAGGCAGTTGCCTACTCTGAGCACAGTGCAGTTAAATGTATTGGCATGACAATAGAAACGTGAGTTTTTCCCCCAAACTTTCAAGTTTTGAGCTTTACATTTCCTCGTCTCTGTATTATACCAGTTCAAACTGTTTCAAGCTTTTATCTTTGTGAATTCTTCATTGGATACGTTATTACTGCAATTAAGATCACGTATGACAACTCCTTGCCGTGGCCTATTATAAGCTCCTGAGACTGTGTTTTTGTTTAATTAGTGAAAAAAGATTTCATTGCTTATTTGTTTTTGCTTAACCAGGAGGCCTGATTATTGTCTTGGACCTCACTTGAGGCAAATGCTTTCTTATGGTTGTACACGCCTGGAGATTGGAGTTCAAAGTACATATGAGGATGTAGCTCGAGACACTAACAGAGGGCATACTGTAGCTGCTGTGGCTGATTGCTTTTGCTTGGCAAAGGATGCTGGTTTCAAGGTTTGTATATGTAAATTTGCAAAGAATAAAGCTAACTCATTGTTAAACCATTTGCAAGGCAACCTTAGATCTGTGGCCGGTTAAGGATTTAAATTTATTGTTCATGTGACGTGATCTTCTTTTAGTAGGTTTTCTCCCCATTTGGGGTTCCTTGAAGTTTGGGTAGCATCATCATCACGTTGCATTGTTAACAATGCATCTTTTTACATTTTTCTAAAGTTTGAAATTAACTCTTTTCTTTTCTTGTAGGTTGTAGCACACATGATGCCTGATCTTCCTAATGTTGGGGTTGAGAGAGACCTGGAAAGTTTTCGGGAGTTCTTTGAGAACCCTTCATTTAGAGCCGATGGGCTCAAAATATATCCCACACTTGTGATCCGTGGAACTGGGCTCTATGAACTATGGAAAACTGGCAGGCAAGTAGCTATTTGTACAATCTCACTATGGAACATGTTATCTTCTCAAACTTGAAAAGAGATGTTCGAATCATGATCCTTGTTTTATAAATTAAATGATCATGTTCCCAATTGAAATATTTTTGTGTGAAAATAGTAATGGTGATAACTATTGCAGATCATCATAAATGTTCATTCATATGCAGGTATAGAAACTATCCACCGGAGCAACTTGTTGATATTGTGGCGAGAATCCTAGCTCTGGTACCTCCCTGGACCCGAGTATATAGAGTACAACGGGATATCCCAATGCCTTTGGTTACTTCTGGTGTAGAGAAAGGAAATCTTCGAGAGCTAGCTCTTGCTCGAATGGATGATTTGGGCTTGAAATGCCGTGATGTTCGAACACGAGAAGCTGGAATTCAGGTTAATTAACAAATGGAGCTTTATGTTCTTTAGTCACACTTCTTATATTCCCAATTTAAACCTAGTACTATGCCTTAGTGAAGGATGTTAAAAGCCTTCCCATTTTGTGACTTCAGGACATTCATCACAAGATTAAACCTGAAGAAGTTGAGCTTGTCCGTCGTGATTATATGGCAAATGAAGGCTGGGAAACGTTTCTATCATATGAAGATGTTCGGCAGGTATCTTATCCCCATACCCCATGTCCTCAGTTTTTTCATGCAATTACAAATTCAAGGCTAATGCTGTGTTACAATTGTGATGCATGGCCATAGCTTGCATTTTGTAGGCTCGTATTACTAGAACTTGAATTTTTATGCAGGATATTCTTGTTGGTCTGCTCCGGCTAAGAAGATGTGGTCGCAACACCACTTGTCCTGAGCTGGTTGGGAAGTGTTCCATTGTTCGTGAACTCCATGTGTATGGAACTGCTGTTCCAGTTCATGGACGTGATACTGAGAAGCTACAGCACCAGGTAATACAGCCCCTCTTTTCTACAAGCTGCATTAAAGAGGAAAGAAAATCCTTTTCTATGCAAAAGAATTAAGAGTATTACTGGATCTTCACAGGGTTATGGCACGCTTTTGATGGAGGAGGCAGAGCGGATAGGTCGTATGGAGCATCGATCAACAAAGATTGCTGTTATATCAGGCGTTGGAACCCGTCATTATTATAGAAAATTAGGTTATGAACTAGAGGGACCTTACATGGTGAAAAGCCTGGAGTGATGAGATTGAATCAATTTTGTTATGATGGTATCACTTAAATGTTATGTTGTAAGCTTCTTTTGCTATCATTTTTGGTAATTGATTACTTTTCATACTTAGACAAATGGAGATAGTTTTATACTTGCTTTTAGTTTGATTGAATATCTCATTCGTCCCTTGGTTCTGTATAATGGATAAATTTGTTCCTAGTGAAAGAGACGGATATATTTTTCATTATTTCTTTCAAAACTCACTCTATTTGTCGATGTAATAAAAGTGGGTAAATAAAA

mRNA sequence

AAAGCCTATTCTACCAAGAAGGTTTTTCTGCTCTCATGGCGACTGCAGTGGTGGCGGAATCGGCTCGGAAACTACCTCGGCCTGGTCGGGGGGGATTCGAAGGTCATGGGTTTTCCGAGGAGGAAGGACGAGTTCGTGCCATTGCTGAGATTGTTAATTCCATGGTCGATCTTTCACGAAAAGGGCAAAACGTCGATCTGAACGCTCTGAAATCCGCTGCCTGCCGGAAATATGGCCTTGCCCGGGCCCCAAAGCTTGTCGAGATGATTGCGGCGCTTCCTGAGTCGGACCGCGAGGCACTGCTGCCGAAGCTTCGAGCCAAGCCGGTTCGAACAGCCTCCGGTATCGCAGTCGTGGCGGTGATGTCTAAACCGCATCGGTGCCCTCATATTGCTACGACGGGGAATATTTGTGTGTACTGCCCCGGGGGACCTGATTCGGACTTTGAGTACAGTACTCAATCTTATACTGGTTATGAGCCCACAAGCATGCGTGCAATTCGTGCAAGATACAATCCATATGTCCAGGCTAGAAGTCGGATAGATCAATTGAAGCGTTTGGGCCATAGTGTTGATAAGGTTGAGTTCATCTTAATGGGTGGGACTTTCATGTCACTGCCAGCTGATTATCGTGATTACTTTATAAGGAATCTTCATGATGCTTTGTCAGGGCATACTTCTGCCAATGTTGAAGAGGCAGTTGCCTACTCTGAGCACAGTGCAGTTAAATGTATTGGCATGACAATAGAAACGAGGCCTGATTATTGTCTTGGACCTCACTTGAGGCAAATGCTTTCTTATGGTTGTACACGCCTGGAGATTGGAGTTCAAAGTACATATGAGGATGTAGCTCGAGACACTAACAGAGGGCATACTGTAGCTGCTGTGGCTGATTGCTTTTGCTTGGCAAAGGATGCTGGTTTCAAGGTTGTAGCACACATGATGCCTGATCTTCCTAATGTTGGGGTTGAGAGAGACCTGGAAAGTTTTCGGGAGTTCTTTGAGAACCCTTCATTTAGAGCCGATGGGCTCAAAATATATCCCACACTTGTGATCCGTGGAACTGGGCTCTATGAACTATGGAAAACTGGCAGGCAAGTAGCTATTTGTACAATCTCACTATGGAACATGTATAGAAACTATCCACCGGAGCAACTTGTTGATATTGTGGCGAGAATCCTAGCTCTGGTACCTCCCTGGACCCGAGTATATAGAGTACAACGGGATATCCCAATGCCTTTGGTTACTTCTGGTGTAGAGAAAGGAAATCTTCGAGAGCTAGCTCTTGCTCGAATGGATGATTTGGGCTTGAAATGCCGTGATGTTCGAACACGAGAAGCTGGAATTCAGGACATTCATCACAAGATTAAACCTGAAGAAGTTGAGCTTGTCCGTCGTGATTATATGGCAAATGAAGGCTGGGAAACGTTTCTATCATATGAAGATGTTCGGCAGGATATTCTTGTTGGTCTGCTCCGGCTAAGAAGATGTGGTCGCAACACCACTTGTCCTGAGCTGGTTGGGAAGTGTTCCATTGTTCGTGAACTCCATGTGTATGGAACTGCTGTTCCAGTTCATGGACGTGATACTGAGAAGCTACAGCACCAGGGTTATGGCACGCTTTTGATGGAGGAGGCAGAGCGGATAGGTCGTATGGAGCATCGATCAACAAAGATTGCTGTTATATCAGGCGTTGGAACCCGTCATTATTATAGAAAATTAGGTTATGAACTAGAGGGACCTTACATGGTGAAAAGCCTGGAGTGATGAGATTGAATCAATTTTGTTATGATGGTATCACTTAAATGTTATGTTGTAAGCTTCTTTTGCTATCATTTTTGGTAATTGATTACTTTTCATACTTAGACAAATGGAGATAGTTTTATACTTGCTTTTAGTTTGATTGAATATCTCATTCGTCCCTTGGTTCTGTATAATGGATAAATTTGTTCCTAGTGAAAGAGACGGATATATTTTTCATTATTTCTTTCAAAACTCACTCTATTTGTCGATGTAATAAAAGTGGGTAAATAAAA

Coding sequence (CDS)

ATGGCGACTGCAGTGGTGGCGGAATCGGCTCGGAAACTACCTCGGCCTGGTCGGGGGGGATTCGAAGGTCATGGGTTTTCCGAGGAGGAAGGACGAGTTCGTGCCATTGCTGAGATTGTTAATTCCATGGTCGATCTTTCACGAAAAGGGCAAAACGTCGATCTGAACGCTCTGAAATCCGCTGCCTGCCGGAAATATGGCCTTGCCCGGGCCCCAAAGCTTGTCGAGATGATTGCGGCGCTTCCTGAGTCGGACCGCGAGGCACTGCTGCCGAAGCTTCGAGCCAAGCCGGTTCGAACAGCCTCCGGTATCGCAGTCGTGGCGGTGATGTCTAAACCGCATCGGTGCCCTCATATTGCTACGACGGGGAATATTTGTGTGTACTGCCCCGGGGGACCTGATTCGGACTTTGAGTACAGTACTCAATCTTATACTGGTTATGAGCCCACAAGCATGCGTGCAATTCGTGCAAGATACAATCCATATGTCCAGGCTAGAAGTCGGATAGATCAATTGAAGCGTTTGGGCCATAGTGTTGATAAGGTTGAGTTCATCTTAATGGGTGGGACTTTCATGTCACTGCCAGCTGATTATCGTGATTACTTTATAAGGAATCTTCATGATGCTTTGTCAGGGCATACTTCTGCCAATGTTGAAGAGGCAGTTGCCTACTCTGAGCACAGTGCAGTTAAATGTATTGGCATGACAATAGAAACGAGGCCTGATTATTGTCTTGGACCTCACTTGAGGCAAATGCTTTCTTATGGTTGTACACGCCTGGAGATTGGAGTTCAAAGTACATATGAGGATGTAGCTCGAGACACTAACAGAGGGCATACTGTAGCTGCTGTGGCTGATTGCTTTTGCTTGGCAAAGGATGCTGGTTTCAAGGTTGTAGCACACATGATGCCTGATCTTCCTAATGTTGGGGTTGAGAGAGACCTGGAAAGTTTTCGGGAGTTCTTTGAGAACCCTTCATTTAGAGCCGATGGGCTCAAAATATATCCCACACTTGTGATCCGTGGAACTGGGCTCTATGAACTATGGAAAACTGGCAGGCAAGTAGCTATTTGTACAATCTCACTATGGAACATGTATAGAAACTATCCACCGGAGCAACTTGTTGATATTGTGGCGAGAATCCTAGCTCTGGTACCTCCCTGGACCCGAGTATATAGAGTACAACGGGATATCCCAATGCCTTTGGTTACTTCTGGTGTAGAGAAAGGAAATCTTCGAGAGCTAGCTCTTGCTCGAATGGATGATTTGGGCTTGAAATGCCGTGATGTTCGAACACGAGAAGCTGGAATTCAGGACATTCATCACAAGATTAAACCTGAAGAAGTTGAGCTTGTCCGTCGTGATTATATGGCAAATGAAGGCTGGGAAACGTTTCTATCATATGAAGATGTTCGGCAGGATATTCTTGTTGGTCTGCTCCGGCTAAGAAGATGTGGTCGCAACACCACTTGTCCTGAGCTGGTTGGGAAGTGTTCCATTGTTCGTGAACTCCATGTGTATGGAACTGCTGTTCCAGTTCATGGACGTGATACTGAGAAGCTACAGCACCAGGGTTATGGCACGCTTTTGATGGAGGAGGCAGAGCGGATAGGTCGTATGGAGCATCGATCAACAAAGATTGCTGTTATATCAGGCGTTGGAACCCGTCATTATTATAGAAAATTAGGTTATGAACTAGAGGGACCTTACATGGTGAAAAGCCTGGAGTGA

Protein sequence

MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKSAACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTISLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLLRLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRMEHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE

Homology

[Close]

BLAST of Carg20186-RA vs. NCBI nr
Match: KAG7021412.1 (Elongator complex protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1172.5 bits (3032), Expect = 0.0e+00
Identity = 576/576 (100.00%), Postives = 576/576 (100.00%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60
           MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS
Sbjct: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120
           AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180
           TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTI 360
           HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTI
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTI 360

Query: 361 SLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420
           SLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM
Sbjct: 361 SLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420

Query: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480
           DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL
Sbjct: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480

Query: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRM 540
           RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRM
Sbjct: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRM 540

Query: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE 577
           EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE
Sbjct: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE 576

[Close]

BLAST of Carg20186-RA vs. NCBI nr
Match: KAG6587428.1 (Elongator complex protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1138.3 bits (2943), Expect = 0.0e+00
Identity = 564/576 (97.92%), Postives = 564/576 (97.92%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60
           MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS
Sbjct: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120
           AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180
           TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTI 360
           HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR------- 360

Query: 361 SLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420
                YRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM
Sbjct: 361 -----YRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420

Query: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480
           DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL
Sbjct: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480

Query: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRM 540
           RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRM
Sbjct: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRM 540

Query: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE 577
           EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE
Sbjct: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE 564

[Close]

BLAST of Carg20186-RA vs. NCBI nr
Match: XP_022933694.1 (elongator complex protein 3 [Cucurbita moschata] >XP_023002338.1 elongator complex protein 3 [Cucurbita maxima] >XP_023531702.1 elongator complex protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1134.8 bits (2934), Expect = 0.0e+00
Identity = 562/576 (97.57%), Postives = 563/576 (97.74%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60
           MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS
Sbjct: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120
           AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180
           TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTI 360
           HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR------- 360

Query: 361 SLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420
                YRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM
Sbjct: 361 -----YRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420

Query: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480
           DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL
Sbjct: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480

Query: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRM 540
           RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERI RM
Sbjct: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIARM 540

Query: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE 577
           EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSL+
Sbjct: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLD 564

[Close]

BLAST of Carg20186-RA vs. NCBI nr
Match: XP_022134894.1 (elongator complex protein 3 [Momordica charantia])

HSP 1 Score: 1123.2 bits (2904), Expect = 0.0e+00
Identity = 556/576 (96.53%), Postives = 559/576 (97.05%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60
           MATAVVAES RKLPRPGRGGFE HGFSEEE RVRAIAEIVNSMVDLSRKGQNVDLNALKS
Sbjct: 1   MATAVVAESNRKLPRPGRGGFEAHGFSEEEARVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120
           AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180
           TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTI 360
           HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR------- 360

Query: 361 SLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420
                YRNYPPEQLVDIVARILA+VPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM
Sbjct: 361 -----YRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420

Query: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480
           DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDY ANEGWETFLSYEDVRQDILVGLL
Sbjct: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYTANEGWETFLSYEDVRQDILVGLL 480

Query: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRM 540
           RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERI R+
Sbjct: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIARV 540

Query: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE 577
           EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSL+
Sbjct: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLD 564

[Close]

BLAST of Carg20186-RA vs. NCBI nr
Match: XP_038880764.1 (elongator complex protein 3 [Benincasa hispida])

HSP 1 Score: 1122.1 bits (2901), Expect = 0.0e+00
Identity = 553/576 (96.01%), Postives = 560/576 (97.22%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60
           MATA+VAES RKLPRPGRGGFEGHGFSEEE RVRAIAEIVNSMVDLSRKGQNVDLNALKS
Sbjct: 1   MATAMVAESNRKLPRPGRGGFEGHGFSEEEARVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120
           AACRKYGL+RAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA
Sbjct: 61  AACRKYGLSRAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180
           TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTS+NVEEAVAYSEH AVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSSNVEEAVAYSEHGAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTI 360
           HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR------- 360

Query: 361 SLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420
                YRNYPPEQLVDIVARILA+VPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM
Sbjct: 361 -----YRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420

Query: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480
           DDLGLKCRDVRTREAGIQDIHHKIKP+EVELVRRDYMANEGWETFLSYEDVRQDILVGLL
Sbjct: 421 DDLGLKCRDVRTREAGIQDIHHKIKPDEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480

Query: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRM 540
           RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERI R+
Sbjct: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIARL 540

Query: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE 577
           EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSL+
Sbjct: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLD 564

[Close]

BLAST of Carg20186-RA vs. ExPASy Swiss-Prot
Match: Q93ZR1 (Elongator complex protein 3 OS=Arabidopsis thaliana OX=3702 GN=HAG3 PE=1 SV=1)

HSP 1 Score: 1050.8 bits (2716), Expect = 5.6e-306
Identity = 511/576 (88.72%), Postives = 540/576 (93.75%), Query Frame = 0


Query: 1   MATAVVAE-SARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALK 60
           MATAVV     +K PRPG+GG++G G +EEE RVRAI+EIV++M++ S + +NVDLNA+K
Sbjct: 1   MATAVVMNGELKKQPRPGKGGYQGRGLTEEEARVRAISEIVSTMIERSHRNENVDLNAIK 60

Query: 61  SAACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHI 120
           +AACRKYGLARAPKLVEMIAALP+S+RE LLPKLRAKPVRTASGIAVVAVMSKPHRCPHI
Sbjct: 61  TAACRKYGLARAPKLVEMIAALPDSERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHI 120

Query: 121 ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV 180
           ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV
Sbjct: 121 ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV 180

Query: 181 DKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIET 240
           DKVEFILMGGTFMSLPA+YRD+FIRNLHDALSGHTSANVEEAVAYSEHSA KCIGMTIET
Sbjct: 181 DKVEFILMGGTFMSLPAEYRDFFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIET 240

Query: 241 RPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV 300
           RPDYCLGPHLRQML YGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV
Sbjct: 241 RPDYCLGPHLRQMLIYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV 300

Query: 301 AHMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICT 360
           AHMMPDLPNVGVERD+ESF+EFFE+PSFRADGLKIYPTLVIRGTGLYELWKTGR      
Sbjct: 301 AHMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGR------ 360

Query: 361 ISLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALAR 420
                 YRNYPPEQLVDIVARIL++VPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALAR
Sbjct: 361 ------YRNYPPEQLVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALAR 420

Query: 421 MDDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGL 480
           MDDLGLKCRDVRTREAGIQDIHHKIKPE+VELVRRDY ANEGWETFLSYED RQDILVGL
Sbjct: 421 MDDLGLKCRDVRTREAGIQDIHHKIKPEQVELVRRDYTANEGWETFLSYEDTRQDILVGL 480

Query: 481 LRLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGR 540
           LRLR+CG+N TCPEL+GKCS+VRELHVYGTAVPVHGRD +KLQHQGYGTLLMEEAERI R
Sbjct: 481 LRLRKCGKNVTCPELMGKCSVVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIAR 540

Query: 541 MEHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSL 576
            EHRS KI VISGVGTRHYYRKLGYELEGPYMVK L
Sbjct: 541 REHRSNKIGVISGVGTRHYYRKLGYELEGPYMVKHL 564

[Close]

BLAST of Carg20186-RA vs. ExPASy Swiss-Prot
Match: Q7X7L3 (Elongator complex protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ELP3 PE=2 SV=2)

HSP 1 Score: 1042.0 bits (2693), Expect = 2.6e-303
Identity = 516/584 (88.36%), Postives = 539/584 (92.29%), Query Frame = 0


Query: 1   MATAVVA--------ESARKLPRPGRGGFE-GHGFSEEEGRVRAIAEIVNSMVDLSRKGQ 60
           MATAV A        +  R+ P PGRGG     G SEEE RVRAIAEIV++M +LSR+G+
Sbjct: 1   MATAVAAAGGGGGGEQPRRRKPAPGRGGVVLPAGLSEEEARVRAIAEIVSAMGELSRRGE 60

Query: 61  NVDLNALKSAACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMS 120
           +VDLNALKSAACR+YGLARAPKLVEMIAA+PE+DR ALLP+LRAKPVRTASGIAVVAVMS
Sbjct: 61  DVDLNALKSAACRRYGLARAPKLVEMIAAVPEADRAALLPRLRAKPVRTASGIAVVAVMS 120

Query: 121 KPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQ 180
           KPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQ
Sbjct: 121 KPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQ 180

Query: 181 LKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVK 240
           LKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAV YSEH AVK
Sbjct: 181 LKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVCYSEHGAVK 240

Query: 241 CIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLA 300
           CIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLA
Sbjct: 241 CIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLA 300

Query: 301 KDAGFKVVAHMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKT 360
           KDAGFKVVAHMMPDLPNVGVERDLESFREFFENP+FRADGLKIYPTLVIRGTGLYELWKT
Sbjct: 301 KDAGFKVVAHMMPDLPNVGVERDLESFREFFENPAFRADGLKIYPTLVIRGTGLYELWKT 360

Query: 361 GRQVAICTISLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGN 420
           GR            YRNYPPE LVDIVARIL++VPPWTRVYRVQRDIPMPLVTSGVEKGN
Sbjct: 361 GR------------YRNYPPELLVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGN 420

Query: 421 LRELALARMDDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDV 480
           LRELALARM+DLGLKCRDVRTREAGIQDIHHKI+P+EVELVRRDY ANEGWETFLSYED 
Sbjct: 421 LRELALARMEDLGLKCRDVRTREAGIQDIHHKIRPDEVELVRRDYAANEGWETFLSYEDT 480

Query: 481 RQDILVGLLRLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLM 540
           +QDIL+GLLRLR+CGRN TCPELVG+CSIVRELHVYGTAVPVHGRD +KLQHQGYGTLLM
Sbjct: 481 QQDILIGLLRLRKCGRNVTCPELVGRCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLM 540

Query: 541 EEAERIGRMEHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSL 576
           EEAERI R EHRS KIAVISGVGTRHYYRKLGYELEGPYMVK L
Sbjct: 541 EEAERIARKEHRSKKIAVISGVGTRHYYRKLGYELEGPYMVKCL 572

[Close]

BLAST of Carg20186-RA vs. ExPASy Swiss-Prot
Match: Q5ZHS1 (Elongator complex protein 3 OS=Gallus gallus OX=9031 GN=ELP3 PE=2 SV=1)

HSP 1 Score: 841.3 bits (2172), Expect = 6.7e-243
Identity = 406/550 (73.82%), Postives = 462/550 (84.00%), Query Frame = 0


Query: 27  SEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKSAACRKYGLARAPKLVEMIAALPESDR 86
           S  E  +  IA+I+  +++   +G++V+LN LK+    KYGL+  P+LV++IAA+P   R
Sbjct: 9   SHAELMMMTIADIIKQLIEAHEQGKDVNLNKLKTKTSAKYGLSAQPRLVDIIAAVPPQHR 68

Query: 87  EALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTG 146
           +AL+PKL+AKP+RTASGIAVVAVM KPHRCPHI  TGNICVYCPGGPDSDFEYSTQSYTG
Sbjct: 69  KALVPKLKAKPIRTASGIAVVAVMCKPHRCPHINFTGNICVYCPGGPDSDFEYSTQSYTG 128

Query: 147 YEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNL 206
           YEPTSMRAIRARY+PY+Q R R++QLK+LGHSVDKVEFI+MGGTFM+LP DYRDYFIRNL
Sbjct: 129 YEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALPEDYRDYFIRNL 188

Query: 207 HDALSGHTSANVEEAVAYSEHSAVKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQS 266
           HDALSGHTS NV EAV YSE S  KC+G+TIETRPDYCL  HL  MLSYGCTRLEIGVQS
Sbjct: 189 HDALSGHTSNNVAEAVKYSERSLTKCVGITIETRPDYCLKRHLSDMLSYGCTRLEIGVQS 248

Query: 267 TYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFENPS 326
            YEDVARDTNRGHTV AV + F LAKDAGFKVVAHMMPDLPN+G+ERD + F EFFENP+
Sbjct: 249 VYEDVARDTNRGHTVKAVCESFHLAKDAGFKVVAHMMPDLPNMGLERDTDQFVEFFENPA 308

Query: 327 FRADGLKIYPTLVIRGTGLYELWKTGRQVAICTISLWNMYRNYPPEQLVDIVARILALVP 386
           FR DG+K+YPTLVIRGTGLYELWKTGR            Y++YPP  LVD+VARILALVP
Sbjct: 309 FRPDGMKLYPTLVIRGTGLYELWKTGR------------YKSYPPSTLVDLVARILALVP 368

Query: 387 PWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHKIKP 446
           PWTRVYRVQRDIPMPLV+SGVE GNLRELALARM DLG +CRDVRTRE GIQ+IHHK++P
Sbjct: 369 PWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTQCRDVRTREVGIQEIHHKVRP 428

Query: 447 EEVELVRRDYMANEGWETFLSYEDVRQDILVGLLRLRRCGRNTTCPELVGKCSIVRELHV 506
            ++EL+RRDY+AN GWETFLSYED  QDILVGLLRLR+C   +  PEL G  SIVRELHV
Sbjct: 429 YQIELIRRDYVANGGWETFLSYEDPEQDILVGLLRLRKCSEESFRPELKGGVSIVRELHV 488

Query: 507 YGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRMEHRSTKIAVISGVGTRHYYRKLGYEL 566
           YG+ VPV  RD  K QHQG+G LLMEEAERI + EH S KIAVISGVGTR+YYRK+GYEL
Sbjct: 489 YGSVVPVSSRDPSKFQHQGFGMLLMEEAERIAKEEHGSWKIAVISGVGTRNYYRKIGYEL 546

Query: 567 EGPYMVKSLE 577
           EGPYMVK L+
Sbjct: 549 EGPYMVKRLQ 546

[Close]

BLAST of Carg20186-RA vs. ExPASy Swiss-Prot
Match: Q9VQZ6 (Elongator complex protein 3 OS=Drosophila melanogaster OX=7227 GN=Elp3 PE=2 SV=1)

HSP 1 Score: 838.2 bits (2164), Expect = 5.7e-242
Identity = 403/554 (72.74%), Postives = 464/554 (83.75%), Query Frame = 0


Query: 23  GHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKSAACRKYGLARAPKLVEMIAALP 82
           G G S +E +V  I EI+  ++      ++V+LN +KS    KYGL  +P+LV++IAA+P
Sbjct: 8   GVGLSRQERQVLVIGEIIQELLKAHEAKKDVNLNRMKSLVASKYGLDSSPRLVDIIAAVP 67

Query: 83  ESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQ 142
           +  ++ LLPKLRAKP+RTASGIAVVAVM KPHRCPHI  TGNICVYCPGGPDSDFEYSTQ
Sbjct: 68  QDAKKILLPKLRAKPIRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQ 127

Query: 143 SYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYF 202
           SYTGYEPTSMRAIR+RY+P++Q R R++QLK+LGHSVDKVEFI+MGGTFM LP +YRDYF
Sbjct: 128 SYTGYEPTSMRAIRSRYDPFLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMCLPEEYRDYF 187

Query: 203 IRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEI 262
           IRNLHDALSGH+SANV EAV YSE S  KCIG+TIETRPDYCL  H+  MLSYGCTRLEI
Sbjct: 188 IRNLHDALSGHSSANVAEAVRYSEKSRTKCIGITIETRPDYCLKRHISDMLSYGCTRLEI 247

Query: 263 GVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFF 322
           GVQS YEDVARDTNRGHTV AV + F L KDAG+K+V HMMPDLPNV  ERD+E F E+F
Sbjct: 248 GVQSVYEDVARDTNRGHTVRAVCESFQLGKDAGYKIVTHMMPDLPNVDFERDIEQFIEYF 307

Query: 323 ENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTISLWNMYRNYPPEQLVDIVARIL 382
           ENP+FR+DGLKIYPTLVIRGTGLYELWKTGR            Y++YPP  LVD+VA+IL
Sbjct: 308 ENPAFRSDGLKIYPTLVIRGTGLYELWKTGR------------YKSYPPSMLVDLVAKIL 367

Query: 383 ALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHH 442
           ALVPPWTRVYRVQRDIPMPLV+SGVE GNLRELALARM DLG  CRDVRTRE GIQ+IH+
Sbjct: 368 ALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTTCRDVRTREVGIQEIHN 427

Query: 443 KIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLLRLRRCGRNTTCPELVGKCSIVR 502
           K++P E+EL+RRDY+AN GWETFLSYED  QDILVGLLRLR+C  +T  PEL G+CSIVR
Sbjct: 428 KVRPYEIELIRRDYVANGGWETFLSYEDPEQDILVGLLRLRKCSPDTFRPELKGECSIVR 487

Query: 503 ELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRMEHRSTKIAVISGVGTRHYYRKL 562
           ELHVYG+ VPV+ RD  K QHQG+G LLMEEAERI R EH STK+AVISGVGTR+YYRK+
Sbjct: 488 ELHVYGSVVPVNARDPTKFQHQGFGMLLMEEAERIAREEHGSTKLAVISGVGTRNYYRKM 547

Query: 563 GYELEGPYMVKSLE 577
           GY+L+GPYM KS+E
Sbjct: 548 GYQLDGPYMSKSIE 549

[Close]

BLAST of Carg20186-RA vs. ExPASy Swiss-Prot
Match: Q5RIC0 (Elongator complex protein 3 OS=Danio rerio OX=7955 GN=elp3 PE=2 SV=3)

HSP 1 Score: 836.6 bits (2160), Expect = 1.6e-241
Identity = 403/549 (73.41%), Postives = 462/549 (84.15%), Query Frame = 0


Query: 27  SEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKSAACRKYGLARAPKLVEMIAALPESDR 86
           S  E  +  IA+++  +V+   +G++++LN +K+    KYGL+  P+LV++IAA+P   R
Sbjct: 11  SRAELMMMTIADVIKQLVEAHEEGKDINLNKVKTKTSAKYGLSAQPRLVDIIAAVPPHYR 70

Query: 87  EALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTG 146
            AL+PKL+AKP+RTASGIAVVAVM KPHRCPHI+ TGNICVYCPGGPDSDFEYSTQSYTG
Sbjct: 71  RALVPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSDFEYSTQSYTG 130

Query: 147 YEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNL 206
           YEPTSMRAIRARY+PY+Q R R++QLK+LGHSVDKVEFI+MGGTFM+LP +YRDYFIRNL
Sbjct: 131 YEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALPEEYRDYFIRNL 190

Query: 207 HDALSGHTSANVEEAVAYSEHSAVKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQS 266
           HDALSGHTS NV EAV YSE S  KC+G+TIETRPDYCL  HL  ML YGCTRLEIGVQS
Sbjct: 191 HDALSGHTSNNVTEAVRYSERSNTKCVGITIETRPDYCLKRHLSDMLGYGCTRLEIGVQS 250

Query: 267 TYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFENPS 326
            YEDVARDTNRGHTV AV + F LAKDAGFKVVAHMMPDLPNVG+ERD+E F EFFENP+
Sbjct: 251 VYEDVARDTNRGHTVRAVCESFHLAKDAGFKVVAHMMPDLPNVGMERDVEQFIEFFENPA 310

Query: 327 FRADGLKIYPTLVIRGTGLYELWKTGRQVAICTISLWNMYRNYPPEQLVDIVARILALVP 386
           FR DGLK+YPTLVIRGTGLYELWKTGR            Y++Y P  LVD+VARILALVP
Sbjct: 311 FRPDGLKLYPTLVIRGTGLYELWKTGR------------YKSYSPSALVDLVARILALVP 370

Query: 387 PWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHKIKP 446
           PWTRVYRVQRDIPMPLV+SGVE GNLRELALARM D+G +CRDVRTRE GIQ+IHHK++P
Sbjct: 371 PWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDMGTECRDVRTREVGIQEIHHKVRP 430

Query: 447 EEVELVRRDYMANEGWETFLSYEDVRQDILVGLLRLRRCGRNTTCPELVGKCSIVRELHV 506
            +VEL+RRDY+AN GWETFLSYED  QDIL+GLLRLRRC   +  PEL G  SIVRELHV
Sbjct: 431 YQVELIRRDYVANGGWETFLSYEDPEQDILIGLLRLRRCSPQSFRPELKGGVSIVRELHV 490

Query: 507 YGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRMEHRSTKIAVISGVGTRHYYRKLGYEL 566
           YG+ VPV  RD  K QHQG+G +LMEEAERI R EH S+K+AVISGVGTR+YYRK+GYEL
Sbjct: 491 YGSVVPVSSRDPSKFQHQGFGMMLMEEAERIARDEHGSSKLAVISGVGTRNYYRKMGYEL 547

Query: 567 EGPYMVKSL 576
           EGPYMVK+L
Sbjct: 551 EGPYMVKNL 547

[Close]

BLAST of Carg20186-RA vs. ExPASy TrEMBL
Match: A0A6J1KT98 (Elongator complex protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111496204 PE=3 SV=1)

HSP 1 Score: 1134.8 bits (2934), Expect = 0.0e+00
Identity = 562/576 (97.57%), Postives = 563/576 (97.74%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60
           MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS
Sbjct: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120
           AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180
           TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTI 360
           HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR------- 360

Query: 361 SLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420
                YRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM
Sbjct: 361 -----YRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420

Query: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480
           DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL
Sbjct: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480

Query: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRM 540
           RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERI RM
Sbjct: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIARM 540

Query: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE 577
           EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSL+
Sbjct: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLD 564

[Close]

BLAST of Carg20186-RA vs. ExPASy TrEMBL
Match: A0A6J1F0G5 (Elongator complex protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111441030 PE=3 SV=1)

HSP 1 Score: 1134.8 bits (2934), Expect = 0.0e+00
Identity = 562/576 (97.57%), Postives = 563/576 (97.74%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60
           MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS
Sbjct: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120
           AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180
           TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTI 360
           HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR------- 360

Query: 361 SLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420
                YRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM
Sbjct: 361 -----YRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420

Query: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480
           DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL
Sbjct: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480

Query: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRM 540
           RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERI RM
Sbjct: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIARM 540

Query: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE 577
           EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSL+
Sbjct: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLD 564

[Close]

BLAST of Carg20186-RA vs. ExPASy TrEMBL
Match: A0A6J1C012 (Elongator complex protein 3 OS=Momordica charantia OX=3673 GN=LOC111007041 PE=3 SV=1)

HSP 1 Score: 1123.2 bits (2904), Expect = 0.0e+00
Identity = 556/576 (96.53%), Postives = 559/576 (97.05%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60
           MATAVVAES RKLPRPGRGGFE HGFSEEE RVRAIAEIVNSMVDLSRKGQNVDLNALKS
Sbjct: 1   MATAVVAESNRKLPRPGRGGFEAHGFSEEEARVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120
           AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180
           TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTI 360
           HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR------- 360

Query: 361 SLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420
                YRNYPPEQLVDIVARILA+VPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM
Sbjct: 361 -----YRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420

Query: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480
           DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDY ANEGWETFLSYEDVRQDILVGLL
Sbjct: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYTANEGWETFLSYEDVRQDILVGLL 480

Query: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRM 540
           RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERI R+
Sbjct: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIARV 540

Query: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE 577
           EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSL+
Sbjct: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLD 564

[Close]

BLAST of Carg20186-RA vs. ExPASy TrEMBL
Match: A0A5D3BHH9 (Elongator complex protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00810 PE=3 SV=1)

HSP 1 Score: 1116.7 bits (2887), Expect = 0.0e+00
Identity = 553/576 (96.01%), Postives = 556/576 (96.53%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60
           MATA+VAE  RKLPRPGRGGFEGHGFSEEE RVRAIAEIVNSMVDLSRKGQNVDLNALKS
Sbjct: 1   MATAMVAEPNRKLPRPGRGGFEGHGFSEEEARVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120
           AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180
           TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEH AVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTI 360
           HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR------- 360

Query: 361 SLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420
                YRNYPPEQLVDIVARILA+VPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM
Sbjct: 361 -----YRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420

Query: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480
           DDLGLKCRDVRTREAGIQDIHHKIKP+EVELVRRDYMANEGWETFLSYEDV QDILVGLL
Sbjct: 421 DDLGLKCRDVRTREAGIQDIHHKIKPDEVELVRRDYMANEGWETFLSYEDVCQDILVGLL 480

Query: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRM 540
           RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERI R 
Sbjct: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIARH 540

Query: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE 577
           EHRS KIAVISGVGTRHYYRKLGYELEGPYMVKSLE
Sbjct: 541 EHRSKKIAVISGVGTRHYYRKLGYELEGPYMVKSLE 564

[Close]

BLAST of Carg20186-RA vs. ExPASy TrEMBL
Match: A0A1S3CM22 (Elongator complex protein 3 OS=Cucumis melo OX=3656 GN=LOC103502347 PE=3 SV=1)

HSP 1 Score: 1116.7 bits (2887), Expect = 0.0e+00
Identity = 553/576 (96.01%), Postives = 556/576 (96.53%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60
           MATA+VAE  RKLPRPGRGGFEGHGFSEEE RVRAIAEIVNSMVDLSRKGQNVDLNALKS
Sbjct: 1   MATAMVAEPNRKLPRPGRGGFEGHGFSEEEARVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120
           AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180
           TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEH AVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTI 360
           HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR------- 360

Query: 361 SLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420
                YRNYPPEQLVDIVARILA+VPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM
Sbjct: 361 -----YRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM 420

Query: 421 DDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLL 480
           DDLGLKCRDVRTREAGIQDIHHKIKP+EVELVRRDYMANEGWETFLSYEDV QDILVGLL
Sbjct: 421 DDLGLKCRDVRTREAGIQDIHHKIKPDEVELVRRDYMANEGWETFLSYEDVCQDILVGLL 480

Query: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGRM 540
           RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERI R 
Sbjct: 481 RLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIARH 540

Query: 541 EHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLE 577
           EHRS KIAVISGVGTRHYYRKLGYELEGPYMVKSLE
Sbjct: 541 EHRSKKIAVISGVGTRHYYRKLGYELEGPYMVKSLE 564

[Close]

BLAST of Carg20186-RA vs. TAIR 10
Match: AT5G50320.1 (radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein )

HSP 1 Score: 1050.8 bits (2716), Expect = 3.9e-307
Identity = 511/576 (88.72%), Postives = 540/576 (93.75%), Query Frame = 0


Query: 1   MATAVVAE-SARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALK 60
           MATAVV     +K PRPG+GG++G G +EEE RVRAI+EIV++M++ S + +NVDLNA+K
Sbjct: 1   MATAVVMNGELKKQPRPGKGGYQGRGLTEEEARVRAISEIVSTMIERSHRNENVDLNAIK 60

Query: 61  SAACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHI 120
           +AACRKYGLARAPKLVEMIAALP+S+RE LLPKLRAKPVRTASGIAVVAVMSKPHRCPHI
Sbjct: 61  TAACRKYGLARAPKLVEMIAALPDSERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHI 120

Query: 121 ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV 180
           ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV
Sbjct: 121 ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV 180

Query: 181 DKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIET 240
           DKVEFILMGGTFMSLPA+YRD+FIRNLHDALSGHTSANVEEAVAYSEHSA KCIGMTIET
Sbjct: 181 DKVEFILMGGTFMSLPAEYRDFFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIET 240

Query: 241 RPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV 300
           RPDYCLGPHLRQML YGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV
Sbjct: 241 RPDYCLGPHLRQMLIYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV 300

Query: 301 AHMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICT 360
           AHMMPDLPNVGVERD+ESF+EFFE+PSFRADGLKIYPTLVIRGTGLYELWKTGR      
Sbjct: 301 AHMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGR------ 360

Query: 361 ISLWNMYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALAR 420
                 YRNYPPEQLVDIVARIL++VPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALAR
Sbjct: 361 ------YRNYPPEQLVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALAR 420

Query: 421 MDDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGL 480
           MDDLGLKCRDVRTREAGIQDIHHKIKPE+VELVRRDY ANEGWETFLSYED RQDILVGL
Sbjct: 421 MDDLGLKCRDVRTREAGIQDIHHKIKPEQVELVRRDYTANEGWETFLSYEDTRQDILVGL 480

Query: 481 LRLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIGR 540
           LRLR+CG+N TCPEL+GKCS+VRELHVYGTAVPVHGRD +KLQHQGYGTLLMEEAERI R
Sbjct: 481 LRLRKCGKNVTCPELMGKCSVVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIAR 540

Query: 541 MEHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSL 576
            EHRS KI VISGVGTRHYYRKLGYELEGPYMVK L
Sbjct: 541 REHRSNKIGVISGVGTRHYYRKLGYELEGPYMVKHL 564

[Close]

BLAST of Carg20186-RA vs. TAIR 10
Match: AT5G63290.1 (Radical SAM superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 6.6e-04
Identity = 28/120 (23.33%), Postives = 58/120 (48.33%), Query Frame = 0


Query: 235 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 294
           +++E  P    G  L+ ++  G  R+ +GVQ+  +++ +   R H V+ V +     K+ 
Sbjct: 164 ISMEMDPGTFDGQKLKDLMKLGVNRVSLGVQAFQDELLKACGRAHGVSQVYEAIEFVKEC 223

Query: 295 GFKVVA-HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR 354
           G +  +  ++  LP+  +E   ES R   E+   + + + +Y   V +GT    L+  G+
Sbjct: 224 GVENWSMDLISSLPHQTLEMWEESLRLAIES---QPNHVSVYDLQVEQGTKFGNLYTPGQ 280

The following BLAST results are available for this feature:

BLAST of Carg20186-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021412.1	0.0e+00	100.00	Elongator complex protein 3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6587428.1	0.0e+00	97.92	Elongator complex protein 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022933694.1	0.0e+00	97.57	elongator complex protein 3 [Cucurbita moschata] >XP_023002338.1 elongator compl...	[more]
XP_022134894.1	0.0e+00	96.53	elongator complex protein 3 [Momordica charantia]	[more]
XP_038880764.1	0.0e+00	96.01	elongator complex protein 3 [Benincasa hispida]	[more]

BLAST of Carg20186-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZR1	5.6e-306	88.72	Elongator complex protein 3 OS=Arabidopsis thaliana OX=3702 GN=HAG3 PE=1 SV=1	[more]
Q7X7L3	2.6e-303	88.36	Elongator complex protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ELP3 PE=...	[more]
Q5ZHS1	6.7e-243	73.82	Elongator complex protein 3 OS=Gallus gallus OX=9031 GN=ELP3 PE=2 SV=1	[more]
Q9VQZ6	5.7e-242	72.74	Elongator complex protein 3 OS=Drosophila melanogaster OX=7227 GN=Elp3 PE=2 SV=1	[more]
Q5RIC0	1.6e-241	73.41	Elongator complex protein 3 OS=Danio rerio OX=7955 GN=elp3 PE=2 SV=3	[more]

BLAST of Carg20186-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KT98	0.0e+00	97.57	Elongator complex protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111496204 PE=3 SV=...	[more]
A0A6J1F0G5	0.0e+00	97.57	Elongator complex protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111441030 PE=3 S...	[more]
A0A6J1C012	0.0e+00	96.53	Elongator complex protein 3 OS=Momordica charantia OX=3673 GN=LOC111007041 PE=3 ...	[more]
A0A5D3BHH9	0.0e+00	96.01	Elongator complex protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3CM22	0.0e+00	96.01	Elongator complex protein 3 OS=Cucumis melo OX=3656 GN=LOC103502347 PE=3 SV=1	[more]

BLAST of Carg20186-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50320.1	3.9e-307	88.72	radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) ...	[more]
AT5G63290.1	6.6e-04	23.33	Radical SAM superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006638	Elp3/MiaB/NifB	SMART	SM00729	MiaB	coord: 106..368 e-value: 8.9E-29 score: 111.6
IPR032432	Radical SAM, C-terminal extension	PFAM	PF16199	Radical_SAM_C	coord: 330..420 e-value: 1.8E-27 score: 95.1
IPR000182	GNAT domain	PFAM	PF00583	Acetyltransf_1	coord: 428..564 e-value: 1.2E-7 score: 32.0
IPR000182	GNAT domain	PROSITE	PS51186	GNAT	coord: 425..576 score: 11.783926
IPR034687	Elongator complex protein 3-like	TIGRFAM	TIGR01211	TIGR01211	coord: 51..575 e-value: 8.9E-215 score: 712.0
IPR034687	Elongator complex protein 3-like	PIRSF	PIRSF005669	HAT_Elp3	coord: 22..576 e-value: 2.3E-239 score: 793.2
IPR034687	Elongator complex protein 3-like	SFLD	SFLDF00344	ELP3-like	coord: 54..576 e-value: 0.0 score: 619.2
IPR034687	Elongator complex protein 3-like	PANTHER	PTHR11135:SF7	ELONGATOR COMPLEX PROTEIN 3	coord: 2..575
IPR007197	Radical SAM	PFAM	PF04055	Radical_SAM	coord: 124..318 e-value: 5.9E-18 score: 65.8
IPR007197	Radical SAM	SFLD	SFLDS00029	Radical_SAM	coord: 54..576 e-value: 0.0 score: 619.2
IPR007197	Radical SAM	PROSITE	PS51918	RADICAL_SAM	coord: 99..401 score: 12.537532
None	No IPR available	GENE3D	3.40.630.30		coord: 427..576 e-value: 3.5E-8 score: 35.8
None	No IPR available	PIRSR	PIRSR000167-2	PIRSR000167-2	coord: 231..313 e-value: 7.9E-7 score: 26.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	CDD	cd01335	Radical_SAM	coord: 113..350 e-value: 6.01972E-7 score: 48.4838
None	No IPR available	SUPERFAMILY	102114	Radical SAM enzymes	coord: 136..384
IPR039661	ELP3/YhcC	PANTHER	PTHR11135	HISTONE ACETYLTRANSFERASE-RELATED	coord: 2..575
IPR016181	Acyl-CoA N-acyltransferase	SUPERFAMILY	55729	Acyl-CoA N-acyltransferases (Nat)	coord: 384..571

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg20186	Carg20186	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20186-RA:9	Carg20186-RA:9	exon
Carg20186-RA:8	Carg20186-RA:8	exon
Carg20186-RA:7	Carg20186-RA:7	exon
Carg20186-RA:6	Carg20186-RA:6	exon
Carg20186-RA:5	Carg20186-RA:5	exon
Carg20186-RA:4	Carg20186-RA:4	exon
Carg20186-RA:3	Carg20186-RA:3	exon
Carg20186-RA:2	Carg20186-RA:2	exon
Carg20186-RA:1	Carg20186-RA:1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20186-RA:three_prime_utr	Carg20186-RA:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20186-RA:cds	Carg20186-RA:cds_9	CDS
Carg20186-RA:cds	Carg20186-RA:cds_8	CDS
Carg20186-RA:cds	Carg20186-RA:cds_7	CDS
Carg20186-RA:cds	Carg20186-RA:cds_6	CDS
Carg20186-RA:cds	Carg20186-RA:cds_5	CDS
Carg20186-RA:cds	Carg20186-RA:cds_4	CDS
Carg20186-RA:cds	Carg20186-RA:cds_3	CDS
Carg20186-RA:cds	Carg20186-RA:cds_2	CDS
Carg20186-RA:cds	Carg20186-RA:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20186-RA:five_prime_utr	Carg20186-RA:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg20186-RA	Carg20186-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002926	tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
biological_process	GO:0051301	cell division
biological_process	GO:0009294	DNA mediated transformation
biological_process	GO:0035265	organ growth
biological_process	GO:0006779	porphyrin-containing compound biosynthetic process
biological_process	GO:0010928	regulation of auxin mediated signaling pathway
biological_process	GO:2000025	regulation of leaf formation
biological_process	GO:0090708	specification of plant organ axis polarity
cellular_component	GO:0005829	cytosol
cellular_component	GO:0033588	elongator holoenzyme complex
cellular_component	GO:0000791	euchromatin
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004109	coproporphyrinogen oxidase activity
molecular_function	GO:0000049	tRNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0008080	N-acetyltransferase activity
molecular_function	GO:0106261	tRNA uridine(34) acetyltransferase activity