Carg20055-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20055-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Obg-like ATPase 1
Location	Carg_Chr09: 3795794 .. 3804501 (-)
Sequence length	3363
RNA-Seq Expression	Carg20055-RA
Synteny	Carg20055-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAATTTACACCTTTCAATCTCATTCCCCGCGATAACTATTTGCTTCATCGCCGTCGGTTCGTCTGCAGCGGGTGGCGGCAACCATGGCTAGAACAGCTTGCTTTCACATTATTCCGTCTCTTCTTCTCCCTTCCAAATCCTCCTTCTTCGGAACTCCCTCACTCTTCTCCGGAGCTTCTCATTTCGACCGTGTTATGGTGGTTGGCCGACGCTTCTCTTCTTCGTCCAAGATCAGCATGAGCCTCAGAGCCGGAATTGTTGGCCTCCCTAATGTTGGAAAATCCACTCTCTTCAATGCCGTCGTAAGTAATCTCCGCTGTTTTCTCTATGTCTCTTATGATTCAATTTGATGTTGTTTGGATTTAGCGCCATGGAGCTGATTGTTTACTCTCGAAAAAACTCCATGGACATTGAAGAATACGATGTGGAGTTGTTGTTATAGCCTGTGGATTGTGATTTTTTTAGGCAGGAGTTGCGAACTATTGGATTTTACTGTAGGTAGTTATAAACAGTAGCCATTCATAAATCCCTGCTCTCTGTGGATTTTCGAATTTCTATGGTCTAAATTCCTTATTCACTAATAGCGGTTGATTCGCGTACTCACTTGTTTAGGCTACGCCTTAAGAGTTTGACATGATAGCTTTTAAATATTCATTCGGATGATGAACGTGGTGGATTTCAATATTTTTTAACTGAAAAAGTCGATTCAGAATAAGTTTTTAACAATTTTTTATGCAAGCTATATCATACTTTGTTTTGTACTGATGATAATCATGCCGTTTTCGAGAAATAGTGTACTGTTATGTGTTCGATTGTGAAAGCTTACTTAACTTCGAACTACTTATCTATTCTTGTGAATTGGATAGCTTCGTGTTATAGTTTATACTTCTACTAGGAAATTTATATCAATCTCGCATGGCACCCATTGTTTATGATGTTACCTTGGTAGGTCGAAAATGGCAAGGCCCAAGCTGCCAACTTTCCTTTCTGTACAATAGAGCCAAATGTAGGAGTAGTTGCAGTTCCGGATCCCCGTCTCCATAAACTTTCCGATCTCAGTAAGTCTCAGCGAGCGGTCCCAGCATCGATAGAATTTGTAGATATTGCTGGGTTAGTTAAAGGAGCCAGTCAAGGAGAGGTAAGGTTTATGCTCACCTCATTGTTCTTTCTCATCATGCATTCCAATCATTTGAAATCTCCTTTTTATATGTCTTTCAGTCGCGGTAATTATAGGATTAAATAATAATAACAACAATTTTCCTTCATTTTTTACTACTGCAGGGATTGGGAAATAAATTTTTATCCCATATTCGCGAGGTGGACTCCATACTTCAGGTTTTTTCTCTACTTGATCCTTTAGTTTTTTTCCTCATAACAGATGAACTGGCTGGTTATGTCTCTGCAATATCAATTGTCTCGTGACTTTGAACTAAGATAAAAAATGTACATCATTTTTTTTAAAGAACATACTTTAACTTGTTGAATTAGTTGTTTGTTTTATAAAATTTGTATTAGCTTTTCTTCCTATACTTCAGCGTACACATTCTCTTATATTATTTTTCTGTTATGTAAGACACGTGCATGTCAATGAGGTTAAGCAATGCCATGGAAGCTCTAAGTATAATCTGGGTGCTTCTTGCGTTTTTCAGTACATAATTTTGTACCGATAGAGAGTTTATTATTATTGTTTCAGGTTGTGCGCTGTTTTGAAGACAATGACATTGTTCATGTCAATGGTAAAATTGATCCAAAAACTGATATCGATGTGATTAACTTAGAGCTTGTTTTTTCAGATCTGGACCAGGTAATGTCATTGAAACCTTTAATATATTTCAATGCAAGTTTTGCTTCTTTCGGAATGCAGGCTATAATCATGTAAAATGGAATGCAGGCTATAATCATGTAAAATTTTGCATTCTTCTCCCAACAACCTTAATTCATCATAGATTCATATGGGAAAAGGGGGCAACTTGATGAGATCCCATGCTTTAGAGTTCCACAGAGAAAAAAAAAAAAAGTTGTCTTAGAAGCTGTTTGGATGTTTGCATTTTGTCCCCTCTTCGATCTCTTCTTTCCTTGATGGTTCATTATGATAACATAGAGCTGATCGTGCTAGAGCCTTTATGACTCGATTAAAAGTATTGTAAATAAAAAAATTCTCGTGCTCGATTGAAGAAGAGATGGCATGTCCTCTGACTGGGTTGATTCAGCTGTTTTAAGTACCTTTTACTTTTTCCATTCTATTTATTTATTTTTATGGGAAACAGATACAAAAGAGAAACACACAGCCTAAAGGCCTTAGGGAGCCTTAGGGATGAGTAGTCCCTAAGCCTAGTTTGGAGGATAAAAAATAAAGGGCCTCCAATCTACATTGATGAGCGAGCATTGCTTGTTACAAAAAGAATTGTGTAAGGCACTCCAAGTGGAGGTAGTAAGCTGACATTTTTACAAAAGAGATCAAAAGAAGAAGTCTTATATGAGAAAAGTCTGCTATTTCGTTCCATCCAAATCTTCTAAAAAAGCGCTCTGGTAATGTTACTCCACAACACCCTTACTTTCTTTTTGAACCACCAAGCAGACAACAACTCTTGCTAGCCATCTTTCACATTTTAAGGAAAACACCAAGCTAGCTGGAACATATTGCAGAGGAAAGACCACCCCTTGTACGGAAAATGACAGTGGAGGACAAGATGGCTACTAGTCTCTGAACTTTTGTTCCGGAGGAGACAGATATTGGGGGAAAGGGCCATTGTTGGGCGTCTAATTTGAGTGCTACTGGTTTGATGAGATGGCAAAAATTATTATTACCAGTATCTTTCTTAAGAAATTACTTTCGGTGAAAAGAGAGAAGTAAGGGACCTCCCAACCCATGCCAAAGGAGATTGTTATAAAAATTGAAGAACTATGTATTAGTTATGCTGCCGCTTTGGTTTCTACTTTTGAGCTTAAAATAGAAGTGAAAAACATAATTATTTAGATCATCCCCTTAGTTGGGTGCATCAGTTAAGCAATGTTTAATATTTGTTTTTCTTGTTGAATTTTATATTGGATGCATACAAATGTATGTGCTACTTACGGAGGAGAAAGATAACCCTTGGGACATTGTCTTACAATGTGGTTCATTGGCATAAATTTTTTCATGCTATTCTGTCATCTATGTCGTGTGACTAATTCATTGGATTTCATTGAATGTGACGTCTCCTTGCTCTGTCATTTTGATGATCTGATCAAAACTAAATTGTACATTTTAAAAGAGATGCAGATTGAGAAAAGATTAGACAAGCTCAAGAAAGGCAAGGCAAGGGATTCACAGTCTAAAGTCAAGGTGTGTTGATCTCACGAGCCTGCTTGTTGCTATAAATTGTACTTTCCTATATTGATGTGCTTAATTAACTATTGGACTGCTCTCAAAGCATGATTAAATTTGTTTGTAAAAATCTAACCTGAATTTTAAAATGTTTTGGCCAAAGAAGAATTGTCATTGGCAATGGAAAGATAAGGTTATGTGTAAATTAAATTACTCGATTTCAAAGCCTAATCAATAGCAGGCATCTAAGGCCCTTTAGTGGAGGCTATTAAAAATGTCAATTCAGTTCAAGTACAAGATGGAACCCAGATCAAATATGTCAAGAACTGAAATGATGGCATGCTTTGGGGTCATTCATGTTGAAATTAAAATGTTTGCTCAGGCTTGCTCTTGTTCTTATAATGACAATCAAATTCATCCCAACTAATTACGTGCCTTTTTAAGGCATTCATCTGCTTGGGCTTAGTCTTCTGTGGACTATTTCAGGACCATCATAGAAAACATTAGTGAAGCAAAGAAATGAAGAATTGAAGTGATTGCCGTGAGAAAGGTAAATCCCATGCCTTGTGAAAATTTAAGAAGAGGAATAAAAGAGAAATAGTGGTGCTCTGTTGATATGGAAAGTAACAAACCCTCGCTAAAACTTTGAAGATGGTAAATTAACAAACCCAAACCTTCGGGTCATTTAAGCCAAATTCCATTGGACGTAGGTGGCTACAAGATGTGTATGCATTAATGTAATACTCCAATAAAGGAACTAAATACTAAGGTTGCTAACTTTAACATCAAAGGCTGGTCCAATGACTGTTGTTTGAAATTCTTAATAGTGTTAGCTTCCCTATTGAAAAAATAACTTAATGTACGACGAGTTTACATTAAGATGCAATACAGATTATGATAACCATATGACAGTGAATTTGTATTTAAAATTCTTTTATCTTTAGAATTTGATGTAATTCATGGATATGTTACATCTCTTGTGTCCTTCCTATCAAATAGTGTCCCTATATCAGTGTCTTCTTGGATCCGATCTCCCACATTTCTGTTGATGTGCCTCTTAGATCATCATGATTCCTAATAATGCTTCCATCTCTTCGTATTTTCTTTTTACCCTTCGGTGGTTCACGCATATTACTAAACTTATTTTCTCTTCCCTTATATCTTCAAGGAAGAAGCCGAGAAATCTGCATTGGAAAAAATCCAGACGGTCCTTATGGATGGGAAACCAGCCCGATCAGTAACTTTAACAGATTTTGAAAAGGATGCTATAAAGCATCTTTGCCTGCTCACAATGAAACCGGTCATATATGTGGCCAATGTAGCAGAATCTGATCTAGCGGAGCCTGCAAGTAATCCTCATGTTGAAGAAGTTATGAGTCTTGCTTCAGAGTTGCAGTCTGGAATAGTGACAGTTTCTGCACAGGTTGGGCTGGGACAATTTTTTGGGCGTTCTAAAAATATCTGTCTCAAGTCTATATAATTTTCTGCAAAATGAAATAGAGTAAAAGCCATTGACATTGTTTGATGAAAATCTGAATTGAGGGGCTTCATATTTTCAGGTTGAGTCTGAGCTTTCTGAACTTCCATCAGAAGAGAGGGTTGAGTATTTAAAATCTCTTGGTGTAAGTGAAAGTGGCCTGGGAAATCTTATTAGGGCAACCTATAACCTTTTGGGACTCCGAACATATTTTACTTCGGGTGAAAAGGTAGGGTTTTGGACAATTACTCTAGTATTTGGTTTACAATCTTTATAATAACTGAGAGATCGTTCGTGGGGCTTTTACAGGAAACAAAAGCCTGGACCATACTTTCAGGTTTGCTTCAATTCTACTAATTTGAGGAAATTAATTGACATTGACCTGATTTTTCTCTCCTAACATGCGTGTATTATGTGTGCTGAAGGAAAATTCCTATGTTGATGTATGCTAATTGGTCTCTATGTCGAATCAGATTTTTTATTATTTATTTTTCATACTTGGCCCTAATAATATATATATTATGAGAAACCGAATTTTCATAGGGAGAACAAGGAAAGTATATATATAAAAAAAGTATTGTTAAATTGCTACTAATCTAAAAAATTTAATTTTAATAGCTAAAGTTAATGAGTTAAGTTGGATTTATCATTTAACTTGTTTTTCATACTCATTACATGTGAGCTTAGTTACAATTAGGATTAACGAAGCTCAACACTTGCATGATTTTTTGATTTATGAACTAAGCATTATAGTTTATGCATGATTTGAATACTCTCGGTGTTCAATTGTTTAGATTTATTTTATTTTCTATTTAGGAATGACTGCACCACAAGCTGCTGGAGTCATTCACTCAGACTTTGAGAGAGGGTTCATTCGCGCAGAGACGGTGAGATTAAAAGTCTTATTGTAAATCGAGAGTTTGAAGAGTTAAATTTTCTCTGTCCAACTTATACGTTTACAAATATCCTTTTCTTGTGAAAATAAAGAAGCCTGTCGTGTTTAGCTTTAAATTATTAGCTGAAAAAGAAAACACAAGTAAACTAATAAAACTAAGTATATCCATCAAAATCCCCTCTGCAAGTTGAGGGAGAAAAATTGGAGGCTTCTTTGAACTAAAAATAAAAAAAGTTGTATGCTTCTATCGTTATGAATAAATAGTAGTTATCATCCTAAATGTTTCATATTATGGTTTTGTGAATTTATCAAATACAAATTCTTGAAACAATTTTTTCTTGTCTATTCTAAATTTCTGAAAAATGGAATGTTCTAATAAGAGTTTAAAGTTATCCTTTACTGAAAAGAAATACCAAGCTTTATTGTACAACTTATTAAATAATGCCATTGTTACCTTATCTTCATACAGATCAGTTAACTTTATATTTAAAGAGAAAACAAATGAACAAACTAATGCTAAATGTCAATTGGCAATAGGCCTGTTCAACAAGCCTAAGAATTTACTCGTATCTTTAATTACTCATGGTCTATATTTTCTGTGATGATAATCCATGTTTCTGTGCTTCTCTTTTCTTCTTTTATTTTGTCTTCAGATTTTCCTTTTCTTAGATTTTTTTTTATTTTTTATTTTTTATTTTTTTGACTTATATAGGTGGCTTATGACGATTTTGTTGCTGCGGGTTCATTTTCTGCAGCAAGGGAGAAAGGACTTGTAAGTTGGTAGTTTCGTTACTGTATGTTTTGAACTCTAAAATGGTATGCATAAAACATGGCATATTTATGGTACAAGATCTTTGAATTAAGTGCACGACTAAGTTCAAGTCCATGGAGTATTTACTGTGGACAGTAGCTCAGTTAATAATATAGTTCAAGCTTAACATATAGCTTAGGAGATGTAGCCTACTGGATATAGCTTGTGGCCACCTTGTTTCTCAAACAATTCTCATACGACGGAGGAATAGGTTAAGGTAAAAGTTGCTGAAATGCAATGTTACAAATAGAATGACCGATAATTCTGTGTCATGTTTATGAATGGCCAAATTTACAAATAGAATGAAATGTATATTTTTCTTGATTTTAATGAGAATCTGGTCTTTGATAATTCTGTGTCATGCCTATCAATCGCCAATATGGATAAACCTTGTCAATAAATTATGAGTGTATTGGGTTAGTTTTTTTCCTTAAAATGACAGTATTTGGATTAAGAAGTCTTTGGAGGACACGTGGGAGGGAGTGAGGTTTAATGCTTCCTTATGGGGTTCATTAATCAATTTTTTTATAATAATTTATTAGCTTGATCTTGGTGTGTATATAAACATTCTTTTCGTTTTCTCAATGAAACTCAGTTTCTTACAAAAAAAGAAAGAAAAAAGGGTTTATTGGGTTCAGGATGCTCCCCTTTTTTATGATTTTTGTTAATTGGGATGTTTTCTTGTAACTAGGACTTGGTTGTTTTCTTCTCTTTTGTTGCCTTTTGATGACCTGAGGCCCTATTCGTTTTTGTGTCCGTGTTCTTGTACTTCCATTTTTCTTGATGAAGATGGTTGCCTACTAGAAAAGTGTGGGTATGTGGAGCACAAATTTGTATTAACTAATTTTCCCTTCAATTAATCTATCTACGGAAATAACTGCAAGTTAATTTTATGCCTTGATTCTTATGCGGAACATTTATGTCCTTTCTAGTTACTGGTTTGTATATGCACTTACGATTATTATGATCTATTTTGACCTATTCTTACCTGTTGAACTGCATGTGGCCTTTTATTTTACTTGGTTTTTAAGAAAACAAGAATTGCACGTGATTTGTGATCTCAACTTCTCATTATTTTGATTTTCCCGTGCCACAAAATTTATTTTGGTAGAAAGAACAAAGAAAACTTTATGTTAGTGAAGGATCACACATCAAAACAACAAAGAGATAAGAAATCGTCCTAAGTGGTATCGAATGGAGTTTGCAAAAATGCCCTGTATTTGATACTTAATTAAAGGAGGATTGTTGCGCAGCTTTATTTAGCGCCTTCAATTTACAAATCGCAAAAGTCAGGAACTCTCAAAGAGCACTATGCTCCTTCTCTATACCTTTGGAAGCTCTATTTCATTCACTGCAAAGAAACCAACTAAGGCTTAACGGTCACCCGAAGCACTTTGCTTCTACTATAAAAAAAGATGACAACATAAAGCCTGGTCATTAAAGTTCGAAGTCTCAAGGGGCACACCAACAAAAGGAAGTTTATTTAGTTAACATTGTAAGGAGGTTTAAGTAGTTCTGTGTCTGAGCCATATTGGTTGAGAAGTTCACTTGTAGTAAAATGACAACATAGCAGTCCATCTCGAAAAAAATCCTAATGGAAGTGTTTAAAGGCTTCTGCGTTTTAATTCCATGAACAGTGAAAGTAGTTCCTCTTCCTCCACTCACTCACTCACTGAAACTTTCATGTTATGTTATTGCAGTTGAGAGCTGAGGGTAAAGAATATATTGTGCAGGAAGGGGATGTCATGCTCTTTCGTTTCAATGTTTAGCAGCTGCTGAGTTTGACCAAGTTGTCCAAGAAGCAGAAAATATAGTGGCGTTTTTTTTTTATGCAAGGTTGAATATTTGAAGTTGATTTATCATTTGATGCTTTTGGGAATTCTCATTGTTTGGGTTCGTCTTTTGTTGGTCAATGGGAGCCAAGTATGAGTTGACAATTTTGAATGTAGAGTGCATAGTTTATTGCACGAACAGATATAAATAGGCTACGAAAGGCAGAATTACACACATAATAAAGGTAGGGAGAGTGGTTGGTACCTAGTGATGGGAAGGGGATCTGTAACTTCTAGTATTGACTCAAGATTTATGTACGAACACTAAAGTTCCTTTCTTCCATTCTTCAAATCCCTTAGTCCCTTTTCCTTACCCGGCAAGTGTTGATTAGTTATCAGGAGACTCAAAATCTAACCTCAGCTAGCAGGTTGATGACAGATCCGA

mRNA sequence

TCAATTTACACCTTTCAATCTCATTCCCCGCGATAACTATTTGCTTCATCGCCGTCGGTTCGTCTGCAGCGGGTGGCGGCAACCATGGCTAGAACAGCTTGCTTTCACATTATTCCGTCTCTTCTTCTCCCTTCCAAATCCTCCTTCTTCGGAACTCCCTCACTCTTCTCCGGAGCTTCTCATTTCGACCGTGTTATGGTGGTTGGCCGACGCTTCTCTTCTTCGTCCAAGATCAGCATGAGCCTCAGAGCCGGAATTGTTGGCCTCCCTAATGTTGGAAAATCCACTCTCTTCAATGCCGTCGTCGAAAATGGCAAGGCCCAAGCTGCCAACTTTCCTTTCTGTACAATAGAGCCAAATGTAGGAGTAGTTGCAGTTCCGGATCCCCGTCTCCATAAACTTTCCGATCTCAGTAAGTCTCAGCGAGCGGTCCCAGCATCGATAGAATTTGTAGATATTGCTGGGTTAGTTAAAGGAGCCAGTCAAGGAGAGGGATTGGGAAATAAATTTTTATCCCATATTCGCGAGGTGGACTCCATACTTCAGGTTGTGCGCTGTTTTGAAGACAATGACATTGTTCATGTCAATGGTAAAATTGATCCAAAAACTGATATCGATGTGATTAACTTAGAGCTTGTTTTTTCAGATCTGGACCAGGTAATGTCATTGAAACCTTTAATATATTTCAATGCAAGTTTTGCTTCTTTCGGAATGCAGGCTATAATCATGTAAAATTTTGCATTCTTCTCCCAACAACCTTAATTCATCATAGATTCATATGGGAAAAGGGGGCAACTTGATGAGATCCCATGCTTTAGAGTTCCACAGAGAAAAAAAAAAAAAGTTGTCTTAGAAGCTGTTTGGATGTTTGCATTTTGTCCCCTCTTCGATCTCTTCTTTCCTTGATGGTTCATTATGATAACATAGAGCTGATCGTGCTAGAGCCTTTATGACTCGATTAAAAGTATTGTAAATAAAAAAATTCTCGTGCTCGATTGAAGAAGAGATGGCATGTCCTCTGACTGGGTTGATTCAGCTGTTTTAAGTACCTTTTACTTTTTCCATTCTATTTATTTATTTTTATGGGAAACAGATACAAAAGAGAAACACACAGCCTAAAGGCCTTAGGGAGCCTTAGGGATGAGTAGTCCCTAAGCCTAGTTTGGAGGATAAAAAATAAAGGGCCTCCAATCTACATTGATGAGCGAGCATTGCTTGTTACAAAAAGAATTGTGTAAGGCACTCCAAGTGGAGGTAGTAAGCTGACATTTTTACAAAAGAGATCAAAAGAAGAAGTCTTATATGAGAAAAGTCTGCTATTTCGTTCCATCCAAATCTTCTAAAAAAGCGCTCTGGTAATGTTACTCCACAACACCCTTACTTTCTTTTTGAACCACCAAGCAGACAACAACTCTTGCTAGCCATCTTTCACATTTTAAGGAAAACACCAAGCTAGCTGGAACATATTGCAGAGGAAAGACCACCCCTTGTACGGAAAATGACAGTGGAGGACAAGATGGCTACTAGTCTCTGAACTTTTGTTCCGGAGGAGACAGATATTGGGGGAAAGGGCCATTGTTGGGCGTCTAATTTGAGTGCTACTGGTTTGATGAGATGGCAAAAATTATTATTACCAGTATCTTTCTTAAGAAATTACTTTCGGTGAAAAGAGAGAAGTAAGGGACCTCCCAACCCATGCCAAAGGAGATTGTTATAAAAATTGAAGAACTATGTATTAGTTATGCTGCCGCTTTGGTTTCTACTTTTGAGCTTAAAATAGAAGTGAAAAACATAATTATTTAGATCATCCCCTTAGTTGGGTGCATCAGTTAAGCAATGTTTAATATTTGTTTTTCTTGTTGAATTTTATATTGGATGCATACAAATGTATGTGCTACTTACGGAGGAGAAAGATAACCCTTGGGACATTGTCTTACAATGTGGTTCATTGGCATAAATTTTTTCATGCTATTCTGTCATCTATGTCGTGTGACTAATTCATTGGATTTCATTGAATGTGACGTCTCCTTGCTCTGTCATTTTGATGATCTGATCAAAACTAAATTGTACATTTTAAAAGAGATGCAGATTGAGAAAAGATTAGACAAGCTCAAGAAAGGCAAGGCAAGGGATTCACAGTCTAAAGTCAAGGAAGAAGCCGAGAAATCTGCATTGGAAAAAATCCAGACGGTCCTTATGGATGGGAAACCAGCCCGATCAGTAACTTTAACAGATTTTGAAAAGGATGCTATAAAGCATCTTTGCCTGCTCACAATGAAACCGGTCATATATGTGGCCAATGTAGCAGAATCTGATCTAGCGGAGCCTGCAAGTAATCCTCATGTTGAAGAAGTTATGAGTCTTGCTTCAGAGTTGCAGTCTGGAATAGTGACAGTTTCTGCACAGGTTGAGTCTGAGCTTTCTGAACTTCCATCAGAAGAGAGGGTTGAGTATTTAAAATCTCTTGGTGTAAGTGAAAGTGGCCTGGGAAATCTTATTAGGGCAACCTATAACCTTTTGGGACTCCGAACATATTTTACTTCGGGTGAAAAGGAAACAAAAGCCTGGACCATACTTTCAGGAATGACTGCACCACAAGCTGCTGGAGTCATTCACTCAGACTTTGAGAGAGGGTTCATTCGCGCAGAGACGGTGGCTTATGACGATTTTGTTGCTGCGGGTTCATTTTCTGCAGCAAGGTAAAATGACAACATAGCAGTCCATCTCGAAAAAAATCCTAATGGAAGTGTTTAAAGGCTTCTGCGTTTTAATTCCATGAACAGTGAAAGTAGTTCCTCTTCCTCCACTCACTCACTCACTGAAACTTTCATGTTATGTTATTGCAGTTGAGAGCTGAGGGTAAAGAATATATTGTGCAGGAAGGGGATGTCATGCTCTTTCGTTTCAATGTTTAGCAGCTGCTGAGTTTGACCAAGTTGTCCAAGAAGCAGAAAATATAGTGGCGTTTTTTTTTTATGCAAGGTTGAATATTTGAAGTTGATTTATCATTTGATGCTTTTGGGAATTCTCATTGTTTGGGTTCGTCTTTTGTTGGTCAATGGGAGCCAAGTATGAGTTGACAATTTTGAATGTAGAGTGCATAGTTTATTGCACGAACAGATATAAATAGGCTACGAAAGGCAGAATTACACACATAATAAAGGTAGGGAGAGTGGTTGGTACCTAGTGATGGGAAGGGGATCTGTAACTTCTAGTATTGACTCAAGATTTATGTACGAACACTAAAGTTCCTTTCTTCCATTCTTCAAATCCCTTAGTCCCTTTTCCTTACCCGGCAAGTGTTGATTAGTTATCAGGAGACTCAAAATCTAACCTCAGCTAGCAGGTTGATGACAGATCCGA

Coding sequence (CDS)

ATGTGGTTCATTGGCATAAATTTTTTCATGCTATTCTGTCATCTATGTCGTGTGACTAATTCATTGGATTTCATTGAATGTGACGTCTCCTTGCTCTGTCATTTTGATGATCTGATCAAAACTAAATTGTACATTTTAAAAGAGATGCAGATTGAGAAAAGATTAGACAAGCTCAAGAAAGGCAAGGCAAGGGATTCACAGTCTAAAGTCAAGGAAGAAGCCGAGAAATCTGCATTGGAAAAAATCCAGACGGTCCTTATGGATGGGAAACCAGCCCGATCAGTAACTTTAACAGATTTTGAAAAGGATGCTATAAAGCATCTTTGCCTGCTCACAATGAAACCGGTCATATATGTGGCCAATGTAGCAGAATCTGATCTAGCGGAGCCTGCAAGTAATCCTCATGTTGAAGAAGTTATGAGTCTTGCTTCAGAGTTGCAGTCTGGAATAGTGACAGTTTCTGCACAGGTTGAGTCTGAGCTTTCTGAACTTCCATCAGAAGAGAGGGTTGAGTATTTAAAATCTCTTGGTGTAAGTGAAAGTGGCCTGGGAAATCTTATTAGGGCAACCTATAACCTTTTGGGACTCCGAACATATTTTACTTCGGGTGAAAAGGAAACAAAAGCCTGGACCATACTTTCAGGAATGACTGCACCACAAGCTGCTGGAGTCATTCACTCAGACTTTGAGAGAGGGTTCATTCGCGCAGAGACGGTGGCTTATGACGATTTTGTTGCTGCGGGTTCATTTTCTGCAGCAAGGTAA

Protein sequence

MWFIGINFFMLFCHLCRVTNSLDFIECDVSLLCHFDDLIKTKLYILKEMQIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVTLTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQVESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGMTAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR

Homology

[Close]

BLAST of Carg20055-RA vs. NCBI nr
Match: KAG7024704.1 (ychF-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 482.6 bits (1241), Expect = 2.0e-132
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MWFIGINFFMLFCHLCRVTNSLDFIECDVSLLCHFDDLIKTKLYILKEMQIEKRLDKLKK 60
           MWFIGINFFMLFCHLCRVTNSLDFIECDVSLLCHFDDLIKTKLYILKEMQIEKRLDKLKK
Sbjct: 1   MWFIGINFFMLFCHLCRVTNSLDFIECDVSLLCHFDDLIKTKLYILKEMQIEKRLDKLKK 60

Query: 61  GKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVTLTDFEKDAIKHLCLLTMKPVIYVA 120
           GKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVTLTDFEKDAIKHLCLLTMKPVIYVA
Sbjct: 61  GKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVTLTDFEKDAIKHLCLLTMKPVIYVA 120

Query: 121 NVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQVESELSELPSEERVEYLKSLGVSE 180
           NVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQVESELSELPSEERVEYLKSLGVSE
Sbjct: 121 NVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQVESELSELPSEERVEYLKSLGVSE 180

Query: 181 SGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGMTAPQAAGVIHSDFERGFIRAETVA 240
           SGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGMTAPQAAGVIHSDFERGFIRAETVA
Sbjct: 181 SGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGMTAPQAAGVIHSDFERGFIRAETVA 240

Query: 241 YDDFVAAGSFSAAR 255
           YDDFVAAGSFSAAR
Sbjct: 241 YDDFVAAGSFSAAR 254

[Close]

BLAST of Carg20055-RA vs. NCBI nr
Match: XP_023534829.1 (uncharacterized protein LOC111796453 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 381.7 bits (979), Expect = 4.9e-102
Identity = 207/218 (94.95%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 37  DLIKTKLYILKEMQIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT 96
           D+I  +L      QIEKRL+KLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT
Sbjct: 178 DVINLELVFSDLDQIEKRLEKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT 237

Query: 97  LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 156
           LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ
Sbjct: 238 LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 297

Query: 157 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 216
           VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM
Sbjct: 298 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 357

Query: 217 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 255
           TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR
Sbjct: 358 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 395

[Close]

BLAST of Carg20055-RA vs. NCBI nr
Match: XP_022937382.1 (uncharacterized protein LOC111443686 [Cucurbita moschata])

HSP 1 Score: 380.9 bits (977), Expect = 8.3e-102
Identity = 207/218 (94.95%), Postives = 209/218 (95.87%), Query Frame = 0


Query: 37  DLIKTKLYILKEMQIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT 96
           D+I  +L      QIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSV 
Sbjct: 178 DVINLELVFSDLDQIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVI 237

Query: 97  LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 156
           LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ
Sbjct: 238 LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 297

Query: 157 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 216
           VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM
Sbjct: 298 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 357

Query: 217 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 255
           TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR
Sbjct: 358 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 395

[Close]

BLAST of Carg20055-RA vs. NCBI nr
Match: KAG6591839.1 (hypothetical protein SDJN03_14185, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 380.9 bits (977), Expect = 8.3e-102
Identity = 207/218 (94.95%), Postives = 209/218 (95.87%), Query Frame = 0


Query: 37  DLIKTKLYILKEMQIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT 96
           D+I  +L      QIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQ VLMDGKPARSVT
Sbjct: 178 DVINLELVFSDLDQIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQMVLMDGKPARSVT 237

Query: 97  LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 156
           LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ
Sbjct: 238 LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 297

Query: 157 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 216
           VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM
Sbjct: 298 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 357

Query: 217 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 255
           TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR
Sbjct: 358 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 395

[Close]

BLAST of Carg20055-RA vs. NCBI nr
Match: XP_022976786.1 (uncharacterized protein LOC111477062 [Cucurbita maxima])

HSP 1 Score: 380.6 bits (976), Expect = 1.1e-101
Identity = 206/218 (94.50%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 37  DLIKTKLYILKEMQIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT 96
           D+I  +L      QIEKRL+KLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT
Sbjct: 178 DVINLELVFSDLDQIEKRLEKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT 237

Query: 97  LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 156
           LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ
Sbjct: 238 LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 297

Query: 157 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 216
           VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM
Sbjct: 298 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 357

Query: 217 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 255
           TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSF+AAR
Sbjct: 358 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFAAAR 395

[Close]

BLAST of Carg20055-RA vs. ExPASy Swiss-Prot
Match: P37518 (Ribosome-binding ATPase YchF OS=Bacillus subtilis (strain 168) OX=224308 GN=ychF PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.3e-45
Identity = 106/245 (43.27%), Postives = 159/245 (64.90%), Query Frame = 0


Query: 13  CHLCRVTNSLDFIECDVSLLCHFDDLIKTKL-YILKEMQ-IEKRLDKLKK-GKARDSQSK 72
           CH+ R  +  D I      +   DD+    L  IL +M+ +EKR+ ++ K  K +D  + 
Sbjct: 101 CHVVRAFSD-DNITHVSGKVDPIDDIETINLELILADMETVEKRITRVSKLAKQKDKDAV 160

Query: 73  VKEEAEKSALEKIQTVLMDGKPARSVTLTDFEKDAIKHLCLLTMKPVIYVANVAESDLAE 132
            + E     L K++      KPARSV  T+ ++  +K L LLT KP++YVANV+E ++A+
Sbjct: 161 FEFE----ILSKLKEAFESEKPARSVEFTEEQQKLVKQLHLLTSKPILYVANVSEDEVAD 220

Query: 133 PASNPHVEEVMSLASELQSGIVTVSAQVESELSELPSEERVEYLKSLGVSESGLGNLIRA 192
           P+ N +V ++   A+   + ++ V A++ESE++EL  EE+  +L+ LG+ ESGL  LI+A
Sbjct: 221 PSGNENVAKIREYAAGENAEVIVVCAKIESEIAELEGEEKQMFLEELGIQESGLDQLIKA 280

Query: 193 TYNLLGLRTYFTSGEKETKAWTILSGMTAPQAAGVIHSDFERGFIRAETVAYDDFVAAGS 252
           +Y+LLGL TYFT+GE+E +AWT   GM AP+ AG+IHSDFERGFIRAETVAY+D +A G 
Sbjct: 281 SYSLLGLATYFTAGEQEVRAWTFKKGMKAPECAGIIHSDFERGFIRAETVAYEDLLAGGG 340

Query: 253 FSAAR 255
            + A+
Sbjct: 341 MAGAK 340

[Close]

BLAST of Carg20055-RA vs. ExPASy Swiss-Prot
Match: Q7VMI2 (Ribosome-binding ATPase YchF OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) OX=233412 GN=ychF PE=3 SV=3)

HSP 1 Score: 162.2 bits (409), Expect = 8.0e-39
Identity = 95/210 (45.24%), Postives = 134/210 (63.81%), Query Frame = 0


Query: 37  DLIKTKLYILKEMQIEKRLDKL-KKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSV 96
           + I T+L +      E+ + +L K+ K+ D  +K     E S LEKI  VL +    RSV
Sbjct: 126 ETINTELALADLDSCERAIQRLQKRAKSGDKDAKF----ELSILEKILPVLENAGMIRSV 185

Query: 97  TLTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSA 156
            L   E  AIK    LT+KP +Y+ANV E       +NP+++ V  LA +  + +V V A
Sbjct: 186 ALDKDELHAIKGYNFLTLKPTMYIANVNEDSF---ENNPYLDRVRQLAEQEGAVVVPVCA 245

Query: 157 QVESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSG 216
            +E+E++EL  EE+V++L+ LG+ E GL  +IRA Y LL L+TYFT+G KE +AWT+  G
Sbjct: 246 AIEAEIAELEDEEKVDFLQDLGIEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTVAVG 305

Query: 217 MTAPQAAGVIHSDFERGFIRAETVAYDDFV 246
            TAP+AA VIH+DFE+GFIRAE +AYDDF+
Sbjct: 306 ATAPKAAAVIHTDFEKGFIRAEVIAYDDFI 328

[Close]

BLAST of Carg20055-RA vs. ExPASy Swiss-Prot
Match: P44681 (Ribosome-binding ATPase YchF OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=ychF PE=1 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-38
Identity = 96/219 (43.84%), Postives = 138/219 (63.01%), Query Frame = 0


Query: 37  DLIKTKLYILKEMQIEKRLDKL-KKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSV 96
           D I T+L +      E+ + +L K+ K  D ++K     E S +EKI  VL +    RSV
Sbjct: 126 DTINTELALADLDSCERAIQRLQKRAKGGDKEAKF----ELSVMEKILPVLENAGMIRSV 185

Query: 97  TLTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSA 156
            L   E  AIK    LT+KP +Y+ANV E       +NP+++ V  +A++  + +V V A
Sbjct: 186 GLDKEELQAIKSYNFLTLKPTMYIANVNEDGF---ENNPYLDRVREIAAKEGAVVVPVCA 245

Query: 157 QVESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSG 216
            +ESE++EL  EE+VE+L+ LG+ E GL  +IRA Y LL L+TYFT+G KE +AWT+  G
Sbjct: 246 AIESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVG 305

Query: 217 MTAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 255
            TAP+AA VIH+DFE+GFIRAE +AY+DF+     + A+
Sbjct: 306 ATAPKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAK 337

[Close]

BLAST of Carg20055-RA vs. ExPASy Swiss-Prot
Match: Q9CP90 (Ribosome-binding ATPase YchF OS=Pasteurella multocida (strain Pm70) OX=272843 GN=ychF PE=3 SV=3)

HSP 1 Score: 159.8 bits (403), Expect = 3.9e-38
Identity = 93/210 (44.29%), Postives = 133/210 (63.33%), Query Frame = 0


Query: 37  DLIKTKLYILKEMQIEKRLDKL-KKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSV 96
           D I T+L +      E+ + +L K+ K  D  +K     E S +EKI  VL +    RS+
Sbjct: 126 DTINTELALADLDSCERAIQRLQKRAKGGDKDAKF----ELSIMEKILPVLENAGMIRSI 185

Query: 97  TLTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSA 156
            L   E  AIK    LT+KP +Y+ANV E       +NP+++ V  +A +  + +V V A
Sbjct: 186 DLDKDELQAIKGYNFLTLKPTMYIANVNEDGF---ENNPYLDRVREIAEKEGAVVVPVCA 245

Query: 157 QVESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSG 216
            +ESE++EL  +E++E+L+ LG+ E GL  +IRA Y LL L+TYFT+G KE +AWTI  G
Sbjct: 246 AIESEIAELDDDEKIEFLQDLGIEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPIG 305

Query: 217 MTAPQAAGVIHSDFERGFIRAETVAYDDFV 246
            TAP++A VIH+DFE+GFIRAE +AYDDF+
Sbjct: 306 ATAPKSAAVIHTDFEKGFIRAEVIAYDDFI 328

[Close]

BLAST of Carg20055-RA vs. ExPASy Swiss-Prot
Match: P0ABU3 (Ribosome-binding ATPase YchF OS=Escherichia coli O157:H7 OX=83334 GN=ychF PE=3 SV=2)

HSP 1 Score: 157.1 bits (396), Expect = 2.6e-37
Identity = 91/210 (43.33%), Postives = 139/210 (66.19%), Query Frame = 0


Query: 37  DLIKTKLYILKEMQIEKRLDKL-KKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSV 96
           ++I T+L +      E+ + ++ KK K  D  +K    AE + LEK    L +    R++
Sbjct: 126 EVINTELALADLDTCERAIHRVQKKAKGGDKDAK----AELAVLEKCLPQLENAGMLRAL 185

Query: 97  TLTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSA 156
            L+  EK AI++L  LT+KP +Y+ANV E       +NP++++V  +A++  S +V V A
Sbjct: 186 DLSAEEKAAIRYLSFLTLKPTMYIANVNEDGF---ENNPYLDQVREIAAKEGSVVVPVCA 245

Query: 157 QVESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSG 216
            VE++++EL  EER E+++ LG+ E GL  +IRA Y LL L+TYFT+G KE +AWTI  G
Sbjct: 246 AVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVG 305

Query: 217 MTAPQAAGVIHSDFERGFIRAETVAYDDFV 246
            TAPQAAG IH+DFE+GFIRA+T++++DF+
Sbjct: 306 ATAPQAAGKIHTDFEKGFIRAQTISFEDFI 328

[Close]

BLAST of Carg20055-RA vs. ExPASy TrEMBL
Match: A0A6J1FB19 (Obg-like ATPase 1 OS=Cucurbita moschata OX=3662 GN=LOC111443686 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 4.0e-102
Identity = 207/218 (94.95%), Postives = 209/218 (95.87%), Query Frame = 0


Query: 37  DLIKTKLYILKEMQIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT 96
           D+I  +L      QIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSV 
Sbjct: 178 DVINLELVFSDLDQIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVI 237

Query: 97  LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 156
           LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ
Sbjct: 238 LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 297

Query: 157 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 216
           VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM
Sbjct: 298 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 357

Query: 217 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 255
           TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR
Sbjct: 358 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 395

[Close]

BLAST of Carg20055-RA vs. ExPASy TrEMBL
Match: A0A6J1IHV4 (Obg-like ATPase 1 OS=Cucurbita maxima OX=3661 GN=LOC111477062 PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 5.3e-102
Identity = 206/218 (94.50%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 37  DLIKTKLYILKEMQIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT 96
           D+I  +L      QIEKRL+KLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT
Sbjct: 178 DVINLELVFSDLDQIEKRLEKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT 237

Query: 97  LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 156
           LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ
Sbjct: 238 LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 297

Query: 157 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 216
           VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM
Sbjct: 298 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 357

Query: 217 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 255
           TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSF+AAR
Sbjct: 358 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFAAAR 395

[Close]

BLAST of Carg20055-RA vs. ExPASy TrEMBL
Match: A0A6J1CLP3 (Obg-like ATPase 1 OS=Momordica charantia OX=3673 GN=LOC111012101 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.9e-99
Identity = 201/218 (92.20%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 37  DLIKTKLYILKEMQIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT 96
           D+I  +L      QIEKRL+KLKKGKARDSQSKVKEEAEKSALEKIQ VLMDGKPARSVT
Sbjct: 178 DVINLELVFSDLDQIEKRLEKLKKGKARDSQSKVKEEAEKSALEKIQKVLMDGKPARSVT 237

Query: 97  LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 156
           LTDFEKDAIKHLCLLT+KPVIYVANVAESDLAEPASNPHV+EVM+LASELQSGIVTVSAQ
Sbjct: 238 LTDFEKDAIKHLCLLTVKPVIYVANVAESDLAEPASNPHVKEVMTLASELQSGIVTVSAQ 297

Query: 157 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 216
           VESELSELPSEER EYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM
Sbjct: 298 VESELSELPSEERFEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 357

Query: 217 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 255
           TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSF+AAR
Sbjct: 358 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFAAAR 395

[Close]

BLAST of Carg20055-RA vs. ExPASy TrEMBL
Match: A0A0A0KZ18 (Obg-like ATPase 1 OS=Cucumis sativus OX=3659 GN=Csa_4G606030 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.3e-97
Identity = 198/218 (90.83%), Postives = 206/218 (94.50%), Query Frame = 0


Query: 37  DLIKTKLYILKEMQIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT 96
           D+I  +L      QIEKRL+KLKKGKA+DSQSKVKEEAEKSALEKIQ VL+DGKPARSVT
Sbjct: 178 DVINLELVFSDLDQIEKRLEKLKKGKAKDSQSKVKEEAEKSALEKIQKVLLDGKPARSVT 237

Query: 97  LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 156
           LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASN HV+EVM LASELQSGIVTVSAQ
Sbjct: 238 LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNLHVKEVMGLASELQSGIVTVSAQ 297

Query: 157 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 216
           VESELSELPSEER EYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTIL+GM
Sbjct: 298 VESELSELPSEERFEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILAGM 357

Query: 217 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 255
           TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSF+AAR
Sbjct: 358 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFAAAR 395

[Close]

BLAST of Carg20055-RA vs. ExPASy TrEMBL
Match: A0A1S3BAU8 (Obg-like ATPase 1 OS=Cucumis melo OX=3656 GN=LOC103487658 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.7e-97
Identity = 196/218 (89.91%), Postives = 206/218 (94.50%), Query Frame = 0


Query: 37  DLIKTKLYILKEMQIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT 96
           D+I  +L +    QIEKRL+KLKKGKA+DSQSKVKEEAEKSALEKIQ VL+DGKPARSVT
Sbjct: 178 DVINLELVLSDLDQIEKRLEKLKKGKAKDSQSKVKEEAEKSALEKIQKVLLDGKPARSVT 237

Query: 97  LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 156
           LTD EKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHV+EVM LASELQSGIVTVSAQ
Sbjct: 238 LTDLEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVKEVMGLASELQSGIVTVSAQ 297

Query: 157 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 216
           VESELSELPSEER EYLKSLGV+ESGLGNLIRATYNLLGLRTYFTSGEKETKAWTIL+GM
Sbjct: 298 VESELSELPSEERFEYLKSLGVNESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILAGM 357

Query: 217 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 255
           TAPQAAGVIHSDFERGFIRAETVAYDDFV AGSF+AAR
Sbjct: 358 TAPQAAGVIHSDFERGFIRAETVAYDDFVTAGSFAAAR 395

[Close]

BLAST of Carg20055-RA vs. TAIR 10
Match: AT1G56050.1 (GTP-binding protein-related )

HSP 1 Score: 312.0 bits (798), Expect = 4.4e-85
Identity = 165/218 (75.69%), Postives = 190/218 (87.16%), Query Frame = 0


Query: 37  DLIKTKLYILKEMQIEKRLDKLKKGKARDSQSKVKEEAEKSALEKIQTVLMDGKPARSVT 96
           D+I  +L      QI KR+++LKKGKA+DSQSKVKEEAEKSALE+IQ  L++GKPARSV 
Sbjct: 178 DVINLELIFCDLDQIGKRIERLKKGKAKDSQSKVKEEAEKSALERIQEALLEGKPARSVA 237

Query: 97  LTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSLASELQSGIVTVSAQ 156
           L+D E + +KHLCLLTMKP+IYVANVAE+DLAEP  N +VEEV  L+S+LQSG V VSAQ
Sbjct: 238 LSDLEMEVVKHLCLLTMKPMIYVANVAETDLAEPEKNAYVEEVKGLSSDLQSGHVVVSAQ 297

Query: 157 VESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILSGM 216
           VESEL+ELP EER EYL SLGVSESGLGNLIRATY+LLGL+TYFTSGEKET+AWTI +GM
Sbjct: 298 VESELTELPLEERTEYLNSLGVSESGLGNLIRATYSLLGLQTYFTSGEKETRAWTIHAGM 357

Query: 217 TAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 255
           TAPQAAGVIHSDFE+GFIRAETVAY+DFV AGS +AAR
Sbjct: 358 TAPQAAGVIHSDFEKGFIRAETVAYEDFVTAGSIAAAR 395

[Close]

BLAST of Carg20055-RA vs. TAIR 10
Match: AT1G30580.1 (GTP binding )

HSP 1 Score: 88.6 bits (218), Expect = 7.9e-18
Identity = 67/233 (28.76%), Postives = 119/233 (51.07%), Query Frame = 0


Query: 32  LCHFDDLIK--------TKLYILKEMQ-IEKRLDKLKKGKARDSQSKVKEEAEKSALEKI 91
           + H DD++         T+   LK+++ + K++D ++K   R +  ++K E E   L+K+
Sbjct: 134 IIHVDDIVDPVRDLETITEELRLKDIEFVGKKIDDVEKSMKRSNDKQLKIELE--LLQKV 193

Query: 92  QTVLMDGKPARSVTLTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNPHVEEVMSL 151
           +  L DGK  R       + + +    LL+ KPV+Y+ N+ E D  +   N  + ++ + 
Sbjct: 194 KAWLEDGKDVRFGDWKTADIEILNTFQLLSAKPVVYLINLNERDY-QRKKNKFLPKIHAW 253

Query: 152 ASELQSG-IVTVSAQVESELSELPSEERVEYLKSLGVSESGLGNLIRATYNLLGLRTYFT 211
             E     ++  S   E  L+++  +E  +Y +     +S L  +I+  ++ + L  +FT
Sbjct: 254 VQEHGGDTMIPFSGVFERSLADMAPDEAAKYCEE-NKLQSALPRIIKTGFSAINLIYFFT 313

Query: 212 SGEKETKAWTILSGMTAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFSAAR 255
           +G  E K W I     APQAAG IH+DFERGFI AE + ++D    G+  A +
Sbjct: 314 AGPDEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLKELGNEPAVK 362

The following BLAST results are available for this feature:

BLAST of Carg20055-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024704.1	2.0e-132	100.00	ychF-2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023534829.1	4.9e-102	94.95	uncharacterized protein LOC111796453 [Cucurbita pepo subsp. pepo]	[more]
XP_022937382.1	8.3e-102	94.95	uncharacterized protein LOC111443686 [Cucurbita moschata]	[more]
KAG6591839.1	8.3e-102	94.95	hypothetical protein SDJN03_14185, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022976786.1	1.1e-101	94.50	uncharacterized protein LOC111477062 [Cucurbita maxima]	[more]

BLAST of Carg20055-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37518	3.3e-45	43.27	Ribosome-binding ATPase YchF OS=Bacillus subtilis (strain 168) OX=224308 GN=ychF...	[more]
Q7VMI2	8.0e-39	45.24	Ribosome-binding ATPase YchF OS=Haemophilus ducreyi (strain 35000HP / ATCC 70072...	[more]
P44681	1.4e-38	43.84	Ribosome-binding ATPase YchF OS=Haemophilus influenzae (strain ATCC 51907 / DSM ...	[more]
Q9CP90	3.9e-38	44.29	Ribosome-binding ATPase YchF OS=Pasteurella multocida (strain Pm70) OX=272843 GN...	[more]
P0ABU3	2.6e-37	43.33	Ribosome-binding ATPase YchF OS=Escherichia coli O157:H7 OX=83334 GN=ychF PE=3 S...	[more]

BLAST of Carg20055-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FB19	4.0e-102	94.95	Obg-like ATPase 1 OS=Cucurbita moschata OX=3662 GN=LOC111443686 PE=3 SV=1	[more]
A0A6J1IHV4	5.3e-102	94.50	Obg-like ATPase 1 OS=Cucurbita maxima OX=3661 GN=LOC111477062 PE=3 SV=1	[more]
A0A6J1CLP3	1.9e-99	92.20	Obg-like ATPase 1 OS=Momordica charantia OX=3673 GN=LOC111012101 PE=3 SV=1	[more]
A0A0A0KZ18	1.3e-97	90.83	Obg-like ATPase 1 OS=Cucumis sativus OX=3659 GN=Csa_4G606030 PE=3 SV=1	[more]
A0A1S3BAU8	1.7e-97	89.91	Obg-like ATPase 1 OS=Cucumis melo OX=3656 GN=LOC103487658 PE=3 SV=1	[more]

BLAST of Carg20055-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56050.1	4.4e-85	75.69	GTP-binding protein-related	[more]
AT1G30580.1	7.9e-18	28.76	GTP binding	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 181..254 e-value: 2.3E-27 score: 96.9
IPR013029	YchF, C-terminal domain	PFAM	PF06071	YchF-GTPase_C	coord: 196..253 e-value: 1.1E-22 score: 79.9
IPR023192	TGS-like domain superfamily	GENE3D	1.10.150.300		coord: 37..114 e-value: 6.0E-11 score: 44.7
None	No IPR available	PANTHER	PTHR23305	OBG GTPASE FAMILY	coord: 37..254
None	No IPR available	PANTHER	PTHR23305:SF18	OBG-LIKE ATPASE 1	coord: 37..254
IPR012676	TGS-like	SUPERFAMILY	81271	TGS-like	coord: 196..253
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 37..218

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg20055	Carg20055	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20055-RA:1	Carg20055-RA:1	exon
Carg20055-RA:2	Carg20055-RA:2	exon
Carg20055-RA:3	Carg20055-RA:3	exon
Carg20055-RA:4	Carg20055-RA:4	exon
Carg20055-RA:5	Carg20055-RA:5	exon
Carg20055-RA:6	Carg20055-RA:6	exon
Carg20055-RA:7	Carg20055-RA:7	exon
Carg20055-RA:8	Carg20055-RA:8	exon
Carg20055-RA:9	Carg20055-RA:9	exon
Carg20055-RA:10	Carg20055-RA:10	exon
Carg20055-RA:11	Carg20055-RA:11	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20055-RA:three_prime_utr	Carg20055-RA:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20055-RA:cds	Carg20055-RA:cds_7	CDS
Carg20055-RA:cds	Carg20055-RA:cds_6	CDS
Carg20055-RA:cds	Carg20055-RA:cds_5	CDS
Carg20055-RA:cds	Carg20055-RA:cds_4	CDS
Carg20055-RA:cds	Carg20055-RA:cds_3	CDS
Carg20055-RA:cds	Carg20055-RA:cds_2	CDS
Carg20055-RA:cds	Carg20055-RA:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20055-RA:five_prime_utr	Carg20055-RA:five_prime_utr_5	five_prime_UTR
Carg20055-RA:five_prime_utr	Carg20055-RA:five_prime_utr_4	five_prime_UTR
Carg20055-RA:five_prime_utr	Carg20055-RA:five_prime_utr_3	five_prime_UTR
Carg20055-RA:five_prime_utr	Carg20055-RA:five_prime_utr_2	five_prime_UTR
Carg20055-RA:five_prime_utr	Carg20055-RA:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg20055-RA	Carg20055-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0043023	ribosomal large subunit binding
molecular_function	GO:0043022	ribosome binding